Cp4.1LG05g05940 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG05g05940
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Protein yippee-like
Location	Cp4.1LG05 : 3556967 .. 3558607 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCAAAAGGATATTGAAGAAATGTGTCTGAAACTGTAGAGCTTCAGAGGTGCTCAACCATGGAGGCCCACAATCCGTACTCGACCTTCGCGTAAATTTCTGACTTCTTTTCATTGTTCTTCCTCTTACTCTTCCCAAATTCAACTTCTCCTTCATTTTCTATGTTAATTAATCCCAAATTCCTTTTCACAGTCTCCAAGTTAAGAATGATTTCCATTTCTCTCTCTTCAATTTGTATTTATCTTTGCTTTAATCGCTCATACCTCATCAACTTTCTTCCATAATTTTCACTAAACTAATAATTTCCGGCACAATCAGGTTCTTCTCTCTCCCTTTATTTCCATTTTCCATAATTTCTTGTTCGTTGATTCAATGATTTTTCCACATTTTGGCTTTTCGGTATGCTCCTTCTCATACTTTTATTGGTGTTCCTGTTCTTGTTGTTGTTCTTAATCCTGTTCCTGTATTATTGAATCCCTTTTGCTTGAAATCTTCTCTCTGATCCTTTATGTTATCTTATATATTTGATCGCGAACCCCCTTTTGATTATTGATCTTTTTCTTTAGGTTTCTAGGTCACCATTGAAATCATTATAGGTAAACGATTTTGTTCTTGTTTTTAGTTTTCCCACCCCTCGTTGGGATTTTGATGATCCATTTATATGGTATCTTGATGGAAAGCTTGAATCTCTTTTAATGCAGTCTAGGTGTTTGATTTAATGCTTGGGGCTTGATGGTTGTGTAGGAGAAGAGGCGTCTTGAGCTCAATCTTCTTGATCAATGGCTGAACTATTGGGGCCACGTTTGTATAGCTGCTGTAATTGTAGAAACCATGTTGCCCTCCATGATGATATAATTTCTAAAGCTTTTCAGGTGGGATCTTAGTGCGTTTGATTATCATCAATGCGAAAGGGTTTGCTAATCTCTCAAAACCCAATGAGAAATTCATGGATTTGATGTTTTTAACACAGTTTTTCTGAAATTTTCGATTGCAAATGCCTTTCTAAAACTTTTCCTGAAGAAGTTTTCATTATCTAATCTTGTTTTTGTCATGAATTATCTCAATAGGGAAGACATGGGCGTGCTTTTCTGTTCTCTCATGCTATGAACATCACAGTGGGACCAAAAGAAGACCGGCATCTCATGACGGGTCTCCACACTGTTGCTGATGTGCATTGTGTTGACTGCCGTGAGGTGCTGGGGTGGAAGTATGAGAGGGCCTATGAGGCATCACAGAAGTATAAAGAAGGAAAGTTCATTCTTGAAAAATCAAAAATCGTTCGGGACAACTGGTAGCGTCCTGTGGATCTTGTTGAATGCATTGATTCTTATTTTGATGTAAGTTTATTGATTCTTCGTGATGTTATCTTGTATATAAAGTCATCATCGTTCTTGTTCTTGTTCTTGTTCTTGTTTCCTGTTTCCTGTTTCCTGTTGCTCTTGTATATAGTATATATCTGTGTAAGCTCTGAACATGACTGGATATCATTGTATCTTCAATGCTCACCATCTGTGTTAATGAAATTGTGGTGCTTAAAGTAAGTCCTTCTTGCATTGAACATGACCTGGATTCCTTTGATATTGTTGTCTTGTCTTATGGCTCTATCGGTGTTCGGTACGCGTTCTCTTCTTTTAGTTTACA

mRNA sequence

TATCAAAAGGATATTGAAGAAATGTGTCTGAAACTGTAGAGCTTCAGAGGTGCTCAACCATGGAGGCCCACAATCCGTACTCGACCTTCGCGTAAATTTCTGACTTCTTTTCATTGTTCTTCCTCTTACTCTTCCCAAATTCAACTTCTCCTTCATTTTCTATGTTAATTAATCCCAAATTCCTTTTCACAGTCTCCAAGTTAAGAATGATTTCCATTTCTCTCTCTTCAATTTGTATTTATCTTTGCTTTAATCGCTCATACCTCATCAACTTTCTTCCATAATTTTCACTAAACTAATAATTTCCGGCACAATCAGGTTTCTAGGTCACCATTGAAATCATTATAGTCTAGGTGTTTGATTTAATGCTTGGGGCTTGATGGTTGTGTAGGAGAAGAGGCGTCTTGAGCTCAATCTTCTTGATCAATGGCTGAACTATTGGGGCCACGTTTGTATAGCTGCTGTAATTGTAGAAACCATGTTGCCCTCCATGATGATATAATTTCTAAAGCTTTTCAGGGAAGACATGGGCGTGCTTTTCTGTTCTCTCATGCTATGAACATCACAGTGGGACCAAAAGAAGACCGGCATCTCATGACGGGTCTCCACACTGTTGCTGATGTGCATTGTGTTGACTGCCGTGAGGTGCTGGGGTGGAAGTATGAGAGGGCCTATGAGGCATCACAGAAGTATAAAGAAGGAAAGTTCATTCTTGAAAAATCAAAAATCGTTCGGGACAACTGGTAGCGTCCTGTGGATCTTGTTGAATGCATTGATTCTTATTTTGATGTAAGTTTATTGATTCTTCGTGATGTTATCTTGTATATAAAGTCATCATCGTTCTTGTTCTTGTTCTTGTTCTTGTTTCCTGTTTCCTGTTTCCTGTTGCTCTTGTATATAGTATATATCTGTGTAAGCTCTGAACATGACTGGATATCATTGTATCTTCAATGCTCACCATCTGTGTTAATGAAATTGTGGTGCTTAAAGTAAGTCCTTCTTGCATTGAACATGACCTGGATTCCTTTGATATTGTTGTCTTGTCTTATGGCTCTATCGGTGTTCGGTACGCGTTCTCTTCTTTTAGTTTACA

Coding sequence (CDS)

ATGGCTGAACTATTGGGGCCACGTTTGTATAGCTGCTGTAATTGTAGAAACCATGTTGCCCTCCATGATGATATAATTTCTAAAGCTTTTCAGGGAAGACATGGGCGTGCTTTTCTGTTCTCTCATGCTATGAACATCACAGTGGGACCAAAAGAAGACCGGCATCTCATGACGGGTCTCCACACTGTTGCTGATGTGCATTGTGTTGACTGCCGTGAGGTGCTGGGGTGGAAGTATGAGAGGGCCTATGAGGCATCACAGAAGTATAAAGAAGGAAAGTTCATTCTTGAAAAATCAAAAATCGTTCGGGACAACTGGTAG

Protein sequence

MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW

Homology

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BLAST of Cp4.1LG05g05940 vs. Swiss-Prot
Match: YIPL6_ARATH (Protein yippee-like At4g27745 OS=Arabidopsis thaliana GN=At4g27745 PE=3 SV=2)

HSP 1 Score: 199.5 bits (506), Expect = 1.8e-50
Identity = 88/106 (83.02%), Postives = 97/106 (91.51%), Query Frame = 1


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60
           MA+ +GPRLYSCCNCRNHV LHDDIISKAFQGR GRAFLFSHAMNI VGPKEDR+L+TGL
Sbjct: 1   MAQAIGPRLYSCCNCRNHVGLHDDIISKAFQGRTGRAFLFSHAMNIVVGPKEDRNLLTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVAD+ CVDC E LGWKYERAYE SQKYKEGKFI EK+KIV+++W
Sbjct: 61  HTVADISCVDCNEPLGWKYERAYETSQKYKEGKFIFEKAKIVKEDW 106

[Close]

BLAST of Cp4.1LG05g05940 vs. Swiss-Prot
Match: YPEL3_MOUSE (Protein yippee-like 3 OS=Mus musculus GN=Ypel3 PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 7.7e-33
Identity = 58/98 (59.18%), Postives = 80/98 (81.63%), Query Frame = 1


Query: 8   RLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVH 67
           R YSC +CR H+A HDD+ISK+FQG  GRA+LF+  +N+  GP E+R L+TGLH VAD+H
Sbjct: 19  RRYSCAHCRAHLANHDDLISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIH 78

Query: 68  CVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDN 106
           C +C+  LGWKYE+A+E+SQKYKEGK+I+E + +++DN
Sbjct: 79  CENCKTTLGWKYEQAFESSQKYKEGKYIIELNHMIKDN 116

[Close]

BLAST of Cp4.1LG05g05940 vs. Swiss-Prot
Match: YPEL3_BOVIN (Protein yippee-like 3 OS=Bos taurus GN=YPEL3 PE=3 SV=2)

HSP 1 Score: 141.0 bits (354), Expect = 7.7e-33
Identity = 58/98 (59.18%), Postives = 80/98 (81.63%), Query Frame = 1


Query: 8   RLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVH 67
           R YSC +CR H+A HDD+ISK+FQG  GRA+LF+  +N+  GP E+R L+TGLH VAD+H
Sbjct: 19  RRYSCAHCRAHLANHDDLISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIH 78

Query: 68  CVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDN 106
           C +C+  LGWKYE+A+E+SQKYKEGK+I+E + +++DN
Sbjct: 79  CENCKTTLGWKYEQAFESSQKYKEGKYIIELNHMIKDN 116

[Close]

BLAST of Cp4.1LG05g05940 vs. Swiss-Prot
Match: YPEL3_CHLAE (Protein yippee-like 3 OS=Chlorocebus aethiops GN=YPEL3 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 7.7e-33
Identity = 58/98 (59.18%), Postives = 80/98 (81.63%), Query Frame = 1


Query: 8   RLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVH 67
           R YSC +CR H+A HDD+ISK+FQG  GRA+LF+  +N+  GP E+R L+TGLH VAD+H
Sbjct: 19  RRYSCAHCRAHLANHDDLISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIH 78

Query: 68  CVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDN 106
           C +C+  LGWKYE+A+E+SQKYKEGK+I+E + +++DN
Sbjct: 79  CENCKTTLGWKYEQAFESSQKYKEGKYIIELNHMIKDN 116

[Close]

BLAST of Cp4.1LG05g05940 vs. Swiss-Prot
Match: YPEL3_HUMAN (Protein yippee-like 3 OS=Homo sapiens GN=YPEL3 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 7.7e-33
Identity = 58/98 (59.18%), Postives = 80/98 (81.63%), Query Frame = 1


Query: 8   RLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVH 67
           R YSC +CR H+A HDD+ISK+FQG  GRA+LF+  +N+  GP E+R L+TGLH VAD+H
Sbjct: 19  RRYSCAHCRAHLANHDDLISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIH 78

Query: 68  CVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDN 106
           C +C+  LGWKYE+A+E+SQKYKEGK+I+E + +++DN
Sbjct: 79  CENCKTTLGWKYEQAFESSQKYKEGKYIIELNHMIKDN 116

[Close]

BLAST of Cp4.1LG05g05940 vs. TrEMBL
Match: A0A0A0KQ44_CUCSA (Protein yippee-like OS=Cucumis sativus GN=Csa_5G139240 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.4e-57
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 1


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60
           MAELLGPRLYSCCNCRNHVA HDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL
Sbjct: 1   MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW
Sbjct: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 106

[Close]

BLAST of Cp4.1LG05g05940 vs. TrEMBL
Match: B9RPI2_RICCO (Protein yippee-like OS=Ricinus communis GN=RCOM_1377480 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 3.2e-54
Identity = 98/106 (92.45%), Postives = 103/106 (97.17%), Query Frame = 1


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60
           MA+L+GPRLYSCCNCRNHV+LHDDIISKAFQGRHGRAFLFSHAMNI VGPKEDRHLMTGL
Sbjct: 1   MADLVGPRLYSCCNCRNHVSLHDDIISKAFQGRHGRAFLFSHAMNIVVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADVHC DC EVLGWKYERAYEASQKYKEGKFILEKSKIV++NW
Sbjct: 61  HTVADVHCADCCEVLGWKYERAYEASQKYKEGKFILEKSKIVKENW 106

[Close]

BLAST of Cp4.1LG05g05940 vs. TrEMBL
Match: A0A067JXD2_JATCU (Protein yippee-like OS=Jatropha curcas GN=JCGZ_20124 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 2.7e-53
Identity = 95/106 (89.62%), Postives = 103/106 (97.17%), Query Frame = 1


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60
           MAEL+GPRLYSCCNCRNHV+LHDDIISKAFQGRHGRAFLFSHAMNI VGPKEDRHL+TGL
Sbjct: 1   MAELVGPRLYSCCNCRNHVSLHDDIISKAFQGRHGRAFLFSHAMNIVVGPKEDRHLITGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVAD++C DCREVLGWKY+RAYEASQKYKEGKFI EKSKIV++NW
Sbjct: 61  HTVADIYCADCREVLGWKYKRAYEASQKYKEGKFIFEKSKIVKENW 106

[Close]

BLAST of Cp4.1LG05g05940 vs. TrEMBL
Match: B9GK91_POPTR (Protein yippee-like OS=Populus trichocarpa GN=POPTR_0001s11220g PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 6.1e-53
Identity = 95/106 (89.62%), Postives = 102/106 (96.23%), Query Frame = 1


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60
           MAE++GPRLYSCCNCRNHVALHDD+ISKAFQGRHGRAFLFSHAMN+ VGPKEDRHLMTGL
Sbjct: 1   MAEVVGPRLYSCCNCRNHVALHDDVISKAFQGRHGRAFLFSHAMNVMVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADV C DCREVLGWKYERAYE +QKYKEGKFILEKSKIV++NW
Sbjct: 61  HTVADVSCSDCREVLGWKYERAYEETQKYKEGKFILEKSKIVKENW 106

[Close]

BLAST of Cp4.1LG05g05940 vs. TrEMBL
Match: A5BLB6_VITVI (Protein yippee-like OS=Vitis vinifera GN=VIT_16s0098g01390 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 7.9e-53
Identity = 95/106 (89.62%), Postives = 101/106 (95.28%), Query Frame = 1


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60
           MAEL GPRLYSCCNCRNHV+LHDDI+SKAFQGRHGRAFLFSHAMNI VGPKEDR L TGL
Sbjct: 1   MAELTGPRLYSCCNCRNHVSLHDDIVSKAFQGRHGRAFLFSHAMNIGVGPKEDRQLTTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVAD+HC DCR+VLGWKYERAYEASQKYKEGKFILEKSKIV++NW
Sbjct: 61  HTVADIHCADCRQVLGWKYERAYEASQKYKEGKFILEKSKIVKENW 106

[Close]

BLAST of Cp4.1LG05g05940 vs. TAIR10
Match: AT4G27745.1 (AT4G27745.1 Yippee family putative zinc-binding protein)

HSP 1 Score: 199.5 bits (506), Expect = 1.0e-51
Identity = 88/106 (83.02%), Postives = 97/106 (91.51%), Query Frame = 1


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60
           MA+ +GPRLYSCCNCRNHV LHDDIISKAFQGR GRAFLFSHAMNI VGPKEDR+L+TGL
Sbjct: 1   MAQAIGPRLYSCCNCRNHVGLHDDIISKAFQGRTGRAFLFSHAMNIVVGPKEDRNLLTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVAD+ CVDC E LGWKYERAYE SQKYKEGKFI EK+KIV+++W
Sbjct: 61  HTVADISCVDCNEPLGWKYERAYETSQKYKEGKFIFEKAKIVKEDW 106

[Close]

BLAST of Cp4.1LG05g05940 vs. TAIR10
Match: AT3G08990.1 (AT3G08990.1 Yippee family putative zinc-binding protein)

HSP 1 Score: 127.1 bits (318), Expect = 6.4e-30
Identity = 55/94 (58.51%), Postives = 74/94 (78.72%), Query Frame = 1


Query: 9   LYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHC 68
           +YSC  C+ H A+ +DIISK+F  +HGRA+LF + +N+TVG KE R ++TG HTVAD+ C
Sbjct: 13  VYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVMITGWHTVADIFC 72

Query: 69  VDCREVLGWKYERAYEASQKYKEGKFILEKSKIV 103
           V C  ++GWKYE AY+ SQKYKEGKFILE+ K++
Sbjct: 73  VSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVL 106

[Close]

BLAST of Cp4.1LG05g05940 vs. TAIR10
Match: AT3G11230.2 (AT3G11230.2 Yippee family putative zinc-binding protein)

HSP 1 Score: 126.7 bits (317), Expect = 8.4e-30
Identity = 52/92 (56.52%), Postives = 73/92 (79.35%), Query Frame = 1


Query: 10  YSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCV 69
           YSC +C+ ++AL DD++SK+FQ RHG+A+LFS  +N+  G KEDR +MTG+HTV D++CV
Sbjct: 47  YSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMMMTGMHTVVDIYCV 106

Query: 70  DCREVLGWKYERAYEASQKYKEGKFILEKSKI 102
            C   +GWKYE A+E +QKYKEGK +LE+ K+
Sbjct: 107 KCGSYVGWKYEFAFEKNQKYKEGKSVLERYKV 138

[Close]

BLAST of Cp4.1LG05g05940 vs. TAIR10
Match: AT2G40110.1 (AT2G40110.1 Yippee family putative zinc-binding protein)

HSP 1 Score: 124.0 bits (310), Expect = 5.5e-29
Identity = 50/94 (53.19%), Postives = 74/94 (78.72%), Query Frame = 1


Query: 8   RLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVH 67
           ++YSC +C+ H+A ++DIISK+F  +HG+A+LF+   N+++G  E+R +MTG HTVAD+ 
Sbjct: 12  KIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEERLMMTGKHTVADIF 71

Query: 68  CVDCREVLGWKYERAYEASQKYKEGKFILEKSKI 102
           CV C  ++GWKYE A+E +QKYKEGK +LE+ KI
Sbjct: 72  CVSCGSIVGWKYETAHEKNQKYKEGKSVLERFKI 105

[Close]

BLAST of Cp4.1LG05g05940 vs. TAIR10
Match: AT5G53940.1 (AT5G53940.1 Yippee family putative zinc-binding protein)

HSP 1 Score: 121.3 bits (303), Expect = 3.5e-28
Identity = 50/95 (52.63%), Postives = 75/95 (78.95%), Query Frame = 1


Query: 8   RLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVH 67
           R Y C  CR H+AL DD++S++F  R G+A+LF+ ++NI++GP E+R +++G+HTVAD+ 
Sbjct: 12  RSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLMLSGMHTVADIF 71

Query: 68  CVDCREVLGWKYERAYEASQKYKEGKFILEKSKIV 103
           C  C + +GWKYE A+E +QKYKEGKF+LE+ +IV
Sbjct: 72  CCCCGQNVGWKYESAHEKAQKYKEGKFVLERGRIV 106

[Close]

BLAST of Cp4.1LG05g05940 vs. NCBI nr
Match: gi|449456411|ref|XP_004145943.1| (PREDICTED: protein yippee-like At4g27745 [Cucumis sativus])

HSP 1 Score: 229.9 bits (585), Expect = 2.0e-57
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 1


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60
           MAELLGPRLYSCCNCRNHVA HDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL
Sbjct: 1   MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW
Sbjct: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 106

[Close]

BLAST of Cp4.1LG05g05940 vs. NCBI nr
Match: gi|1000974111|ref|XP_015572669.1| (PREDICTED: protein yippee-like At4g27745 isoform X2 [Ricinus communis])

HSP 1 Score: 218.8 bits (556), Expect = 4.6e-54
Identity = 98/106 (92.45%), Postives = 103/106 (97.17%), Query Frame = 1


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60
           MA+L+GPRLYSCCNCRNHV+LHDDIISKAFQGRHGRAFLFSHAMNI VGPKEDRHLMTGL
Sbjct: 1   MADLVGPRLYSCCNCRNHVSLHDDIISKAFQGRHGRAFLFSHAMNIVVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADVHC DC EVLGWKYERAYEASQKYKEGKFILEKSKIV++NW
Sbjct: 61  HTVADVHCADCCEVLGWKYERAYEASQKYKEGKFILEKSKIVKENW 106

[Close]

BLAST of Cp4.1LG05g05940 vs. NCBI nr
Match: gi|802709143|ref|XP_012084536.1| (PREDICTED: protein yippee-like At4g27745 [Jatropha curcas])

HSP 1 Score: 215.7 bits (548), Expect = 3.9e-53
Identity = 95/106 (89.62%), Postives = 103/106 (97.17%), Query Frame = 1


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60
           MAEL+GPRLYSCCNCRNHV+LHDDIISKAFQGRHGRAFLFSHAMNI VGPKEDRHL+TGL
Sbjct: 1   MAELVGPRLYSCCNCRNHVSLHDDIISKAFQGRHGRAFLFSHAMNIVVGPKEDRHLITGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVAD++C DCREVLGWKY+RAYEASQKYKEGKFI EKSKIV++NW
Sbjct: 61  HTVADIYCADCREVLGWKYKRAYEASQKYKEGKFIFEKSKIVKENW 106

[Close]

BLAST of Cp4.1LG05g05940 vs. NCBI nr
Match: gi|1012215679|ref|XP_015934375.1| (PREDICTED: protein yippee-like At4g27745 [Arachis duranensis])

HSP 1 Score: 215.3 bits (547), Expect = 5.1e-53
Identity = 96/106 (90.57%), Postives = 103/106 (97.17%), Query Frame = 1


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60
           MAEL+GPRLYSCCNCRNHV+LHDDIISKAFQGR+GRAFLFSHAMN+  GPKEDRHLMTGL
Sbjct: 1   MAELIGPRLYSCCNCRNHVSLHDDIISKAFQGRNGRAFLFSHAMNVVTGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADV+C DCREVLGWKYE+AYEASQKYKEGKFILEKSKIVR+NW
Sbjct: 61  HTVADVYCGDCREVLGWKYEKAYEASQKYKEGKFILEKSKIVRENW 106

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BLAST of Cp4.1LG05g05940 vs. NCBI nr
Match: gi|224053739|ref|XP_002297955.1| (Yippee-like family protein [Populus trichocarpa])

HSP 1 Score: 214.5 bits (545), Expect = 8.7e-53
Identity = 95/106 (89.62%), Postives = 102/106 (96.23%), Query Frame = 1


Query: 1   MAELLGPRLYSCCNCRNHVALHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGL 60
           MAE++GPRLYSCCNCRNHVALHDD+ISKAFQGRHGRAFLFSHAMN+ VGPKEDRHLMTGL
Sbjct: 1   MAEVVGPRLYSCCNCRNHVALHDDVISKAFQGRHGRAFLFSHAMNVMVGPKEDRHLMTGL 60

Query: 61  HTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW 107
           HTVADV C DCREVLGWKYERAYE +QKYKEGKFILEKSKIV++NW
Sbjct: 61  HTVADVSCSDCREVLGWKYERAYEETQKYKEGKFILEKSKIVKENW 106

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g05940 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YIPL6_ARATH	1.8e-50	83.02	Protein yippee-like At4g27745 OS=Arabidopsis thaliana GN=At4g27745 PE=3 SV=2	[more]
YPEL3_MOUSE	7.7e-33	59.18	Protein yippee-like 3 OS=Mus musculus GN=Ypel3 PE=1 SV=1	[more]
YPEL3_BOVIN	7.7e-33	59.18	Protein yippee-like 3 OS=Bos taurus GN=YPEL3 PE=3 SV=2	[more]
YPEL3_CHLAE	7.7e-33	59.18	Protein yippee-like 3 OS=Chlorocebus aethiops GN=YPEL3 PE=3 SV=1	[more]
YPEL3_HUMAN	7.7e-33	59.18	Protein yippee-like 3 OS=Homo sapiens GN=YPEL3 PE=2 SV=1	[more]

BLAST of Cp4.1LG05g05940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQ44_CUCSA	1.4e-57	99.06	Protein yippee-like OS=Cucumis sativus GN=Csa_5G139240 PE=3 SV=1	[more]
B9RPI2_RICCO	3.2e-54	92.45	Protein yippee-like OS=Ricinus communis GN=RCOM_1377480 PE=3 SV=1	[more]
A0A067JXD2_JATCU	2.7e-53	89.62	Protein yippee-like OS=Jatropha curcas GN=JCGZ_20124 PE=3 SV=1	[more]
B9GK91_POPTR	6.1e-53	89.62	Protein yippee-like OS=Populus trichocarpa GN=POPTR_0001s11220g PE=3 SV=1	[more]
A5BLB6_VITVI	7.9e-53	89.62	Protein yippee-like OS=Vitis vinifera GN=VIT_16s0098g01390 PE=3 SV=1	[more]

BLAST of Cp4.1LG05g05940 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G27745.1	1.0e-51	83.02	Yippee family putative zinc-binding protein	[more]
AT3G08990.1	6.4e-30	58.51	Yippee family putative zinc-binding protein	[more]
AT3G11230.2	8.4e-30	56.52	Yippee family putative zinc-binding protein	[more]
AT2G40110.1	5.5e-29	53.19	Yippee family putative zinc-binding protein	[more]
AT5G53940.1	3.5e-28	52.63	Yippee family putative zinc-binding protein	[more]

BLAST of Cp4.1LG05g05940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456411\|ref\|XP_004145943.1\|	2.0e-57	99.06	PREDICTED: protein yippee-like At4g27745 [Cucumis sativus]	[more]
gi\|1000974111\|ref\|XP_015572669.1\|	4.6e-54	92.45	PREDICTED: protein yippee-like At4g27745 isoform X2 [Ricinus communis]	[more]
gi\|802709143\|ref\|XP_012084536.1\|	3.9e-53	89.62	PREDICTED: protein yippee-like At4g27745 [Jatropha curcas]	[more]
gi\|1012215679\|ref\|XP_015934375.1\|	5.1e-53	90.57	PREDICTED: protein yippee-like At4g27745 [Arachis duranensis]	[more]
gi\|224053739\|ref\|XP_002297955.1\|	8.7e-53	89.62	Yippee-like family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004910	Yippee/Mis18/Cereblon

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g05940.1	Cp4.1LG05g05940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004910	Yippee/Mis18/Cereblon	PFAM	PF03226	Yippee-Mis18	coord: 10..101 score: 1.4
None	No IPR available	PANTHER	PTHR13848	FAMILY NOT NAMED	coord: 1..106 score: 7.0
None	No IPR available	PANTHER	PTHR13848:SF9	SUBFAMILY NOT NAMED	coord: 1..106 score: 7.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG05g05940	CmaCh14G021250	Cucurbita maxima (Rimu)	cmacpeB291
Cp4.1LG05g05940	CmoCh02G011660	Cucurbita moschata (Rifu)	cmocpeB595
Cp4.1LG05g05940	Cla021133	Watermelon (97103) v1	cpewmB704
Cp4.1LG05g05940	Cla004878	Watermelon (97103) v1	cpewmB708
Cp4.1LG05g05940	Csa5G139240	Cucumber (Chinese Long) v2	cpecuB740
Cp4.1LG05g05940	MELO3C005899	Melon (DHL92) v3.5.1	cpemeB649
Cp4.1LG05g05940	ClCG01G000250	Watermelon (Charleston Gray)	cpewcgB635
Cp4.1LG05g05940	ClCG05G000630	Watermelon (Charleston Gray)	cpewcgB677
Cp4.1LG05g05940	CSPI05G03000	Wild cucumber (PI 183967)	cpecpiB741
Cp4.1LG05g05940	Lsi05G021480	Bottle gourd (USVL1VR-Ls)	cpelsiB626
Cp4.1LG05g05940	MELO3C005899.2	Melon (DHL92) v3.6.1	cpemedB777

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG05g05940	Cp4.1LG03g16010	Cucurbita pepo (Zucchini)	cpecpeB479

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG05g05940	Silver-seed gourd	carcpeB0718
Cp4.1LG05g05940	Silver-seed gourd	carcpeB0765
Cp4.1LG05g05940	Silver-seed gourd	carcpeB1377
Cp4.1LG05g05940	Cucumber (Chinese Long) v3	cpecucB0899
Cp4.1LG05g05940	Cucumber (Chinese Long) v3	cpecucB0910
Cp4.1LG05g05940	Cucumber (Chinese Long) v3	cpecucB0919
Cp4.1LG05g05940	Wax gourd	cpewgoB0916
Cp4.1LG05g05940	Wax gourd	cpewgoB0928
Cp4.1LG05g05940	Cucurbita pepo (Zucchini)	cpecpeB057
Cp4.1LG05g05940	Cucurbita pepo (Zucchini)	cpecpeB227
Cp4.1LG05g05940	Cucurbita pepo (Zucchini)	cpecpeB245
Cp4.1LG05g05940	Cucumber (Gy14) v1	cgycpeB0011
Cp4.1LG05g05940	Cucumber (Gy14) v1	cgycpeB0575
Cp4.1LG05g05940	Cucumber (Gy14) v1	cgycpeB0576
Cp4.1LG05g05940	Cucumber (Gy14) v1	cgycpeB0685
Cp4.1LG05g05940	Cucurbita maxima (Rimu)	cmacpeB330
Cp4.1LG05g05940	Cucurbita maxima (Rimu)	cmacpeB358
Cp4.1LG05g05940	Cucurbita maxima (Rimu)	cmacpeB453
Cp4.1LG05g05940	Cucurbita maxima (Rimu)	cmacpeB646
Cp4.1LG05g05940	Cucurbita moschata (Rifu)	cmocpeB293
Cp4.1LG05g05940	Cucurbita moschata (Rifu)	cmocpeB322
Cp4.1LG05g05940	Cucurbita moschata (Rifu)	cmocpeB414
Cp4.1LG05g05940	Wild cucumber (PI 183967)	cpecpiB722
Cp4.1LG05g05940	Wild cucumber (PI 183967)	cpecpiB723
Cp4.1LG05g05940	Wild cucumber (PI 183967)	cpecpiB733
Cp4.1LG05g05940	Cucumber (Chinese Long) v2	cpecuB720
Cp4.1LG05g05940	Cucumber (Chinese Long) v2	cpecuB722
Cp4.1LG05g05940	Cucumber (Chinese Long) v2	cpecuB730
Cp4.1LG05g05940	Bottle gourd (USVL1VR-Ls)	cpelsiB579
Cp4.1LG05g05940	Bottle gourd (USVL1VR-Ls)	cpelsiB622
Cp4.1LG05g05940	Watermelon (Charleston Gray)	cpewcgB678
Cp4.1LG05g05940	Watermelon (97103) v1	cpewmB705
Cp4.1LG05g05940	Melon (DHL92) v3.5.1	cpemeB651
Cp4.1LG05g05940	Melon (DHL92) v3.5.1	cpemeB698
Cp4.1LG05g05940	Melon (DHL92) v3.5.1	cpemeB701
Cp4.1LG05g05940	Cucumber (Gy14) v2	cgybcpeB428
Cp4.1LG05g05940	Cucumber (Gy14) v2	cgybcpeB430
Cp4.1LG05g05940	Cucumber (Gy14) v2	cgybcpeB686
Cp4.1LG05g05940	Melon (DHL92) v3.6.1	cpemedB779
Cp4.1LG05g05940	Melon (DHL92) v3.6.1	cpemedB832
Cp4.1LG05g05940	Melon (DHL92) v3.6.1	cpemedB837