Cp4.1LG03g16010 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g16010
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionProtein yippee-like
LocationCp4.1LG03 : 13514827 .. 13515333 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGCCAGCATTTGGCAAATTCATCCTTTAAAAGGAACAACTTTACATACCTTTCCGAGTGATTGGTTTCGAAGGTGCAGAAGAGGATCATTATCATCATCATCATCATCAATAATGGCGGACTTGATGATCGGGGCGCGGCTGTACAGTTGCCAGAATTGCAGTAATGAAGTATCACGACATGATGACATTATTTCGAAAGGGTTTCAGGTAACAACAAAGAAGTTTGGGTTTTGATTTTGTTATTTATAGGAATAATTTGCTGTGTTGGTGCAGTCGCTGCGGGGAAGAGCGTTCTTGTTCTACGAAGCAAGGAATGTGGAAGAGGGGCCTCAACAGGAGAAGATGTTACTCAGCGGAACATACATAGTTTCTGATTTGTTTTGTTCGGAGTGTGGCCAAATGTTGGGATGGAAATACATTAAGGCTTATGATGAAACTCAGAGGTACAAAGAAGGCAAAGTGGTTTTGGAGAAGTTCAAGATCACCAACGAATGTTGCTAA

mRNA sequence

ATGATCGCCAGCATTTGGCAAATTCATCCTTTAAAAGGAACAACTTTACATACCTTTCCGAGTGATTGGTTTCGAAGGTGCAGAAGAGGATCATTATCATCATCATCATCATCAATAATGGCGGACTTGATGATCGGGGCGCGGCTGTACAGTTGCCAGAATTGCAGTAATGAAGTATCACGACATGATGACATTATTTCGAAAGGGTTTCAGTCGCTGCGGGGAAGAGCGTTCTTGTTCTACGAAGCAAGGAATGTGGAAGAGGGGCCTCAACAGGAGAAGATGTTACTCAGCGGAACATACATAGTTTCTGATTTGTTTTGTTCGGAGTGTGGCCAAATGTTGGGATGGAAATACATTAAGGCTTATGATGAAACTCAGAGGTACAAAGAAGGCAAAGTGGTTTTGGAGAAGTTCAAGATCACCAACGAATGTTGCTAA

Coding sequence (CDS)

ATGATCGCCAGCATTTGGCAAATTCATCCTTTAAAAGGAACAACTTTACATACCTTTCCGAGTGATTGGTTTCGAAGGTGCAGAAGAGGATCATTATCATCATCATCATCATCAATAATGGCGGACTTGATGATCGGGGCGCGGCTGTACAGTTGCCAGAATTGCAGTAATGAAGTATCACGACATGATGACATTATTTCGAAAGGGTTTCAGTCGCTGCGGGGAAGAGCGTTCTTGTTCTACGAAGCAAGGAATGTGGAAGAGGGGCCTCAACAGGAGAAGATGTTACTCAGCGGAACATACATAGTTTCTGATTTGTTTTGTTCGGAGTGTGGCCAAATGTTGGGATGGAAATACATTAAGGCTTATGATGAAACTCAGAGGTACAAAGAAGGCAAAGTGGTTTTGGAGAAGTTCAAGATCACCAACGAATGTTGCTAA

Protein sequence

MIASIWQIHPLKGTTLHTFPSDWFRRCRRGSLSSSSSSIMADLMIGARLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSGTYIVSDLFCSECGQMLGWKYIKAYDETQRYKEGKVVLEKFKITNECC
Homology
[Close]
BLAST of Cp4.1LG03g16010 vs. Swiss-Prot
Match: YIPL6_ARATH (Protein yippee-like At4g27745 OS=Arabidopsis thaliana GN=At4g27745 PE=3 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-27
Identity = 55/100 (55.00%), Postives = 71/100 (71.00%), Query Frame = 1 

Query: 45  IGARLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSGTYIVS 104
           IG RLYSC NC N V  HDDIISK FQ   GRAFLF  A N+  GP++++ LL+G + V+
Sbjct: 5   IGPRLYSCCNCRNHVGLHDDIISKAFQGRTGRAFLFSHAMNIVVGPKEDRNLLTGLHTVA 64

Query: 105 DLFCSECGQMLGWKYIKAYDETQRYKEGKVVLEKFKITNE 145
           D+ C +C + LGWKY +AY+ +Q+YKEGK + EK KI  E
Sbjct: 65  DISCVDCNEPLGWKYERAYETSQKYKEGKFIFEKAKIVKE 104

[Close]
BLAST of Cp4.1LG03g16010 vs. Swiss-Prot
Match: YIPL5_ARATH (Protein yippee-like At4g27740 OS=Arabidopsis thaliana GN=At4g27740 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-22
Identity = 45/93 (48.39%), Postives = 66/93 (70.97%), Query Frame = 1 

Query: 50  YSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSGTYIVSDLFCS 109
           Y C+NC N ++  +D+ISK F    G AF+F  A NV  GP+  + L++G+Y+V+D+ CS
Sbjct: 10  YFCRNCENPLALGEDLISKKFVGASGPAFMFSHAMNVVVGPKIGRKLITGSYVVADVMCS 69

Query: 110 ECGQMLGWKYIKAYDETQRYKEGKVVLEKFKIT 143
           +CG+ LGWKY++ +D  QRYKEG  V+EK K+T
Sbjct: 70  KCGETLGWKYVETFDLKQRYKEGMFVIEKLKLT 102

[Close]
BLAST of Cp4.1LG03g16010 vs. Swiss-Prot
Match: YIPL7_ARATH (Protein yippee-like At5g53940 OS=Arabidopsis thaliana GN=At5g53940 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-21
Identity = 43/97 (44.33%), Postives = 68/97 (70.10%), Query Frame = 1 

Query: 48  RLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSGTYIVSDLF 107
           R Y C+ C   ++  DD++S+ F   RG+A+LF  + N+  GP +E+++LSG + V+D+F
Sbjct: 12  RSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLMLSGMHTVADIF 71

Query: 108 CSECGQMLGWKYIKAYDETQRYKEGKVVLEKFKITNE 145
           C  CGQ +GWKY  A+++ Q+YKEGK VLE+ +I +E
Sbjct: 72  CCCCGQNVGWKYESAHEKAQKYKEGKFVLERGRIVDE 108

[Close]
BLAST of Cp4.1LG03g16010 vs. Swiss-Prot
Match: YIPL_SOLTU (Protein yippee-like OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-21
Identity = 42/100 (42.00%), Postives = 71/100 (71.00%), Query Frame = 1 

Query: 43  LMIGARLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSGTYI 102
           L +  ++YSC++C   ++  ++I+SK F    G+A+LF +  NV  G  + +M+++G + 
Sbjct: 7   LTLEGKIYSCKHCGTHLALSENIVSKSFHCKHGKAYLFSKVVNVTSGEIENRMMMTGMHT 66

Query: 103 VSDLFCSECGQMLGWKYIKAYDETQRYKEGKVVLEKFKIT 143
           V+D+FC  CG ++GWKY  A++++Q+YKEGK VLE+FKIT
Sbjct: 67  VADIFCVCCGSIVGWKYETAHEKSQKYKEGKSVLERFKIT 106

[Close]
BLAST of Cp4.1LG03g16010 vs. Swiss-Prot
Match: YPEL3_ORYLA (Protein yippee-like 3 OS=Oryzias latipes GN=ypel3 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.9e-21
Identity = 43/90 (47.78%), Postives = 64/90 (71.11%), Query Frame = 1 

Query: 48  RLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSGTYIVSDLF 107
           R YSC +C   ++ HDD+ISK FQ  +GRA+LF    NV  GP +E++LL+G + V+D++
Sbjct: 19  RRYSCVHCRAHLANHDDLISKSFQGSQGRAYLFNSVVNVGCGPAEERLLLTGLHAVADIY 78

Query: 108 CSECGQMLGWKYIKAYDETQRYKEGKVVLE 138
           C  C   LGWKY +A++ +Q+YKEGK ++E
Sbjct: 79  CENCHTTLGWKYEQAFELSQKYKEGKYIIE 108

[Close]
BLAST of Cp4.1LG03g16010 vs. TrEMBL
Match: A0A0A0L731_CUCSA (Protein yippee-like OS=Cucumis sativus GN=Csa_3G119360 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 7.6e-38
Identity = 72/99 (72.73%), Postives = 88/99 (88.89%), Query Frame = 1 

Query: 44  MIGARLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSGTYIV 103
           +I  R+YSC NC N++SRHDDIISKGFQS++GRAFLFYEA+NV EG ++ KML++G Y V
Sbjct: 8   LIRERVYSCHNCRNQISRHDDIISKGFQSVKGRAFLFYEAKNVREGAEENKMLITGNYKV 67

Query: 104 SDLFCSECGQMLGWKYIKAYDETQRYKEGKVVLEKFKIT 143
            DL+C+ECGQ+LGWKYIKAY+ TQ+YKEGKVVLEKFKIT
Sbjct: 68  RDLYCNECGQLLGWKYIKAYNVTQKYKEGKVVLEKFKIT 106

[Close]
BLAST of Cp4.1LG03g16010 vs. TrEMBL
Match: A0A061DUD3_THECC (Protein yippee-like OS=Theobroma cacao GN=TCM_005102 PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 4.8e-32
Identity = 61/105 (58.10%), Postives = 84/105 (80.00%), Query Frame = 1 

Query: 40  MADLMIGARLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSG 99
           MAD MIG RLY+C  C N + RHDDIISK FQ+  GRAFLF   +NV +GP++++ L++G
Sbjct: 1   MADWMIGPRLYNCYKCGNMICRHDDIISKIFQASHGRAFLFTHVQNVVDGPEEDRQLMTG 60

Query: 100 TYIVSDLFCSECGQMLGWKYIKAYDETQRYKEGKVVLEKFKITNE 145
            + V+D++CS+CG++LGW+YIKAY+E Q+YKEGK+VLE+ KI  E
Sbjct: 61  LHTVTDVYCSDCGELLGWRYIKAYEELQKYKEGKIVLERLKIAKE 105

[Close]
BLAST of Cp4.1LG03g16010 vs. TrEMBL
Match: B9SBD2_RICCO (Protein yippee-like OS=Ricinus communis GN=RCOM_0716000 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.2e-30
Identity = 61/100 (61.00%), Postives = 81/100 (81.00%), Query Frame = 1 

Query: 45  IGARLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSGTYIVS 104
           IGARLYSC  C N VSRHDDIISKGFQ+  GRAFLF  A N+  G ++++ L++G + V+
Sbjct: 5   IGARLYSCYRCRNLVSRHDDIISKGFQASNGRAFLFSHAMNIILGRKEDRQLITGLHTVA 64

Query: 105 DLFCSECGQMLGWKYIKAYDETQRYKEGKVVLEKFKITNE 145
           D++CS+CG++LGWKY +AY+E+Q+YKEGK V+EKFKI  E
Sbjct: 65  DIYCSDCGELLGWKYERAYEESQKYKEGKFVIEKFKIVKE 104

[Close]
BLAST of Cp4.1LG03g16010 vs. TrEMBL
Match: D7UCX2_VITVI (Protein yippee-like OS=Vitis vinifera GN=VIT_15s0046g00080 PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.0e-30
Identity = 61/105 (58.10%), Postives = 80/105 (76.19%), Query Frame = 1 

Query: 40  MADLMIGARLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSG 99
           MAD+    R+YSC NC N V+RH+DI SK FQ+  GRAFLF  A N+ EGP++ + L++G
Sbjct: 1   MADVS-APRIYSCHNCRNHVARHEDIFSKNFQASHGRAFLFSHAMNIVEGPKENRNLITG 60

Query: 100 TYIVSDLFCSECGQMLGWKYIKAYDETQRYKEGKVVLEKFKITNE 145
            ++V+D+FC  CG  LGWKY KAY+E+Q+YKEGK +LEKFKIT E
Sbjct: 61  LHVVADIFCKNCGMALGWKYEKAYEESQKYKEGKFILEKFKITKE 104

[Close]
BLAST of Cp4.1LG03g16010 vs. TrEMBL
Match: V4VXC0_9ROSI (Protein yippee-like OS=Citrus clementina GN=CICLE_v10022978mg PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.5e-30
Identity = 59/105 (56.19%), Postives = 84/105 (80.00%), Query Frame = 1 

Query: 40  MADLMIGARLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSG 99
           MAD +IG R YSC  C N VS H+DI+SKGFQ+  GRAFLF  A N+ EGP++++ LL+G
Sbjct: 1   MADNLIGPRRYSCYRCRNLVSCHEDIVSKGFQASSGRAFLFSHAANIVEGPKEDQHLLTG 60

Query: 100 TYIVSDLFCSECGQMLGWKYIKAYDETQRYKEGKVVLEKFKITNE 145
            + V+D++C++CG++LGW Y +A++E+Q+YKEGK+VLEKFKI  +
Sbjct: 61  LHTVADVYCADCGELLGWTYKRAFEESQKYKEGKIVLEKFKIAKD 105

[Close]
BLAST of Cp4.1LG03g16010 vs. TAIR10
Match: AT4G27745.1 (AT4G27745.1 Yippee family putative zinc-binding protein)

HSP 1 Score: 124.0 bits (310), Expect = 7.5e-29
Identity = 55/100 (55.00%), Postives = 71/100 (71.00%), Query Frame = 1 

Query: 45  IGARLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSGTYIVS 104
           IG RLYSC NC N V  HDDIISK FQ   GRAFLF  A N+  GP++++ LL+G + V+
Sbjct: 5   IGPRLYSCCNCRNHVGLHDDIISKAFQGRTGRAFLFSHAMNIVVGPKEDRNLLTGLHTVA 64

Query: 105 DLFCSECGQMLGWKYIKAYDETQRYKEGKVVLEKFKITNE 145
           D+ C +C + LGWKY +AY+ +Q+YKEGK + EK KI  E
Sbjct: 65  DISCVDCNEPLGWKYERAYETSQKYKEGKFIFEKAKIVKE 104

[Close]
BLAST of Cp4.1LG03g16010 vs. TAIR10
Match: AT2G40110.1 (AT2G40110.1 Yippee family putative zinc-binding protein)

HSP 1 Score: 107.8 bits (268), Expect = 5.6e-24
Identity = 42/95 (44.21%), Postives = 70/95 (73.68%), Query Frame = 1 

Query: 48  RLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSGTYIVSDLF 107
           ++YSC++C   ++ ++DIISK F    G+A+LF +  NV  G  +E+++++G + V+D+F
Sbjct: 12  KIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEERLMMTGKHTVADIF 71

Query: 108 CSECGQMLGWKYIKAYDETQRYKEGKVVLEKFKIT 143
           C  CG ++GWKY  A+++ Q+YKEGK VLE+FKI+
Sbjct: 72  CVSCGSIVGWKYETAHEKNQKYKEGKSVLERFKIS 106

[Close]
BLAST of Cp4.1LG03g16010 vs. TAIR10
Match: AT4G27740.1 (AT4G27740.1 Yippee family putative zinc-binding protein)

HSP 1 Score: 107.5 bits (267), Expect = 7.3e-24
Identity = 45/93 (48.39%), Postives = 66/93 (70.97%), Query Frame = 1 

Query: 50  YSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSGTYIVSDLFCS 109
           Y C+NC N ++  +D+ISK F    G AF+F  A NV  GP+  + L++G+Y+V+D+ CS
Sbjct: 10  YFCRNCENPLALGEDLISKKFVGASGPAFMFSHAMNVVVGPKIGRKLITGSYVVADVMCS 69

Query: 110 ECGQMLGWKYIKAYDETQRYKEGKVVLEKFKIT 143
           +CG+ LGWKY++ +D  QRYKEG  V+EK K+T
Sbjct: 70  KCGETLGWKYVETFDLKQRYKEGMFVIEKLKLT 102

[Close]
BLAST of Cp4.1LG03g16010 vs. TAIR10
Match: AT5G53940.1 (AT5G53940.1 Yippee family putative zinc-binding protein)

HSP 1 Score: 104.4 bits (259), Expect = 6.2e-23
Identity = 43/97 (44.33%), Postives = 68/97 (70.10%), Query Frame = 1 

Query: 48  RLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSGTYIVSDLF 107
           R Y C+ C   ++  DD++S+ F   RG+A+LF  + N+  GP +E+++LSG + V+D+F
Sbjct: 12  RSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLMLSGMHTVADIF 71

Query: 108 CSECGQMLGWKYIKAYDETQRYKEGKVVLEKFKITNE 145
           C  CGQ +GWKY  A+++ Q+YKEGK VLE+ +I +E
Sbjct: 72  CCCCGQNVGWKYESAHEKAQKYKEGKFVLERGRIVDE 108

[Close]
BLAST of Cp4.1LG03g16010 vs. TAIR10
Match: AT3G11230.2 (AT3G11230.2 Yippee family putative zinc-binding protein)

HSP 1 Score: 103.2 bits (256), Expect = 1.4e-22
Identity = 40/92 (43.48%), Postives = 68/92 (73.91%), Query Frame = 1 

Query: 50  YSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSGTYIVSDLFCS 109
           YSC++C   ++  DD++SK FQS  G+A+LF +  NV  G ++++M+++G + V D++C 
Sbjct: 47  YSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMMMTGMHTVVDIYCV 106

Query: 110 ECGQMLGWKYIKAYDETQRYKEGKVVLEKFKI 142
           +CG  +GWKY  A+++ Q+YKEGK VLE++K+
Sbjct: 107 KCGSYVGWKYEFAFEKNQKYKEGKSVLERYKV 138

[Close]
BLAST of Cp4.1LG03g16010 vs. NCBI nr
Match: gi|778676811|ref|XP_004133801.2| (PREDICTED: protein yippee-like At4g27745 [Cucumis sativus])

HSP 1 Score: 178.3 bits (451), Expect = 9.5e-42
Identity = 89/149 (59.73%), Postives = 113/149 (75.84%), Query Frame = 1 

Query: 1   MIASIWQ-IHPLKGTTLHTFPSDWF------RRCRRGSLSSSSSSIMADLMIGARLYSCQ 60
           MI + WQ ++ LKGTTLH+  S  F      R+  R  +  + +  + DL I  R+YSC 
Sbjct: 1   MIGTNWQKLNLLKGTTLHSILSVDFLFREKERKKERRKVEETMNPSVEDL-IRERVYSCH 60

Query: 61  NCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSGTYIVSDLFCSECGQ 120
           NC N++SRHDDIISKGFQS++GRAFLFYEA+NV EG ++ KML++G Y V DL+C+ECGQ
Sbjct: 61  NCRNQISRHDDIISKGFQSVKGRAFLFYEAKNVREGAEENKMLITGNYKVRDLYCNECGQ 120

Query: 121 MLGWKYIKAYDETQRYKEGKVVLEKFKIT 143
           +LGWKYIKAY+ TQ+YKEGKVVLEKFKIT
Sbjct: 121 LLGWKYIKAYNVTQKYKEGKVVLEKFKIT 148

[Close]
BLAST of Cp4.1LG03g16010 vs. NCBI nr
Match: gi|659074901|ref|XP_008437856.1| (PREDICTED: protein yippee-like At4g27745 [Cucumis melo])

HSP 1 Score: 171.0 bits (432), Expect = 1.5e-39
Identity = 77/104 (74.04%), Postives = 93/104 (89.42%), Query Frame = 1 

Query: 40  MADLMIGARLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSG 99
           +ADLM   R+YSCQNC N++SRHDDIISKGFQS++GRAFLFYEARNV EG ++ KM +SG
Sbjct: 5   VADLM-RERIYSCQNCRNQISRHDDIISKGFQSVKGRAFLFYEARNVREGAEENKMFISG 64

Query: 100 TYIVSDLFCSECGQMLGWKYIKAYDETQRYKEGKVVLEKFKITN 144
            Y V DL+C+ECGQ+LGWKYIKAYD++Q+YKEGKVVLEKFKIT+
Sbjct: 65  NYKVCDLYCNECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITD 107

[Close]
BLAST of Cp4.1LG03g16010 vs. NCBI nr
Match: gi|700201269|gb|KGN56402.1| (hypothetical protein Csa_3G119360 [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 1.1e-37
Identity = 72/99 (72.73%), Postives = 88/99 (88.89%), Query Frame = 1 

Query: 44  MIGARLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSGTYIV 103
           +I  R+YSC NC N++SRHDDIISKGFQS++GRAFLFYEA+NV EG ++ KML++G Y V
Sbjct: 8   LIRERVYSCHNCRNQISRHDDIISKGFQSVKGRAFLFYEAKNVREGAEENKMLITGNYKV 67

Query: 104 SDLFCSECGQMLGWKYIKAYDETQRYKEGKVVLEKFKIT 143
            DL+C+ECGQ+LGWKYIKAY+ TQ+YKEGKVVLEKFKIT
Sbjct: 68  RDLYCNECGQLLGWKYIKAYNVTQKYKEGKVVLEKFKIT 106

[Close]
BLAST of Cp4.1LG03g16010 vs. NCBI nr
Match: gi|590721013|ref|XP_007051489.1| (Yippee family zinc-binding protein, putative [Theobroma cacao])

HSP 1 Score: 145.6 bits (366), Expect = 6.8e-32
Identity = 61/105 (58.10%), Postives = 84/105 (80.00%), Query Frame = 1 

Query: 40  MADLMIGARLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSG 99
           MAD MIG RLY+C  C N + RHDDIISK FQ+  GRAFLF   +NV +GP++++ L++G
Sbjct: 1   MADWMIGPRLYNCYKCGNMICRHDDIISKIFQASHGRAFLFTHVQNVVDGPEEDRQLMTG 60

Query: 100 TYIVSDLFCSECGQMLGWKYIKAYDETQRYKEGKVVLEKFKITNE 145
            + V+D++CS+CG++LGW+YIKAY+E Q+YKEGK+VLE+ KI  E
Sbjct: 61  LHTVTDVYCSDCGELLGWRYIKAYEELQKYKEGKIVLERLKIAKE 105

[Close]
BLAST of Cp4.1LG03g16010 vs. NCBI nr
Match: gi|1009156600|ref|XP_015896325.1| (PREDICTED: protein yippee-like At4g27745 [Ziziphus jujuba])

HSP 1 Score: 141.4 bits (355), Expect = 1.3e-30
Identity = 62/105 (59.05%), Postives = 82/105 (78.10%), Query Frame = 1 

Query: 40  MADLMIGARLYSCQNCSNEVSRHDDIISKGFQSLRGRAFLFYEARNVEEGPQQEKMLLSG 99
           MADL+IG RLYSC NC N V+ HDD+ISK FQ   GRAFLF  A NV  GP++++ L++G
Sbjct: 1   MADLVIGPRLYSCCNCRNHVALHDDVISKAFQGRNGRAFLFSHAMNVMVGPKEDRHLMTG 60

Query: 100 TYIVSDLFCSECGQMLGWKYIKAYDETQRYKEGKVVLEKFKITNE 145
            + V+D++CS+C ++LGWKY +AY+ETQ+YKEGK +LEK KI  E
Sbjct: 61  LHTVADVYCSDCHEVLGWKYERAYEETQKYKEGKFILEKSKIVKE 105

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g16010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
YIPL6_ARATH1.3e-2755.00Protein yippee-like At4g27745 OS=Arabidopsis thaliana GN=At4g27745 PE=3 SV=2[more]
YIPL5_ARATH1.3e-2248.39Protein yippee-like At4g27740 OS=Arabidopsis thaliana GN=At4g27740 PE=3 SV=1[more]
YIPL7_ARATH1.1e-2144.33Protein yippee-like At5g53940 OS=Arabidopsis thaliana GN=At5g53940 PE=2 SV=1[more]
YIPL_SOLTU1.4e-2142.00Protein yippee-like OS=Solanum tuberosum PE=2 SV=1[more]
YPEL3_ORYLA1.9e-2147.78Protein yippee-like 3 OS=Oryzias latipes GN=ypel3 PE=3 SV=1[more]
BLAST of Cp4.1LG03g16010 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L731_CUCSA7.6e-3872.73Protein yippee-like OS=Cucumis sativus GN=Csa_3G119360 PE=3 SV=1[more]
A0A061DUD3_THECC4.8e-3258.10Protein yippee-like OS=Theobroma cacao GN=TCM_005102 PE=3 SV=1[more]
B9SBD2_RICCO1.2e-3061.00Protein yippee-like OS=Ricinus communis GN=RCOM_0716000 PE=3 SV=1[more]
D7UCX2_VITVI2.0e-3058.10Protein yippee-like OS=Vitis vinifera GN=VIT_15s0046g00080 PE=3 SV=1[more]
V4VXC0_9ROSI4.5e-3056.19Protein yippee-like OS=Citrus clementina GN=CICLE_v10022978mg PE=3 SV=1[more]
BLAST of Cp4.1LG03g16010 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G27745.17.5e-2955.00 Yippee family putative zinc-binding protein[more]
AT2G40110.15.6e-2444.21 Yippee family putative zinc-binding protein[more]
AT4G27740.17.3e-2448.39 Yippee family putative zinc-binding protein[more]
AT5G53940.16.2e-2344.33 Yippee family putative zinc-binding protein[more]
AT3G11230.21.4e-2243.48 Yippee family putative zinc-binding protein[more]
BLAST of Cp4.1LG03g16010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778676811|ref|XP_004133801.2|9.5e-4259.73PREDICTED: protein yippee-like At4g27745 [Cucumis sativus][more]
gi|659074901|ref|XP_008437856.1|1.5e-3974.04PREDICTED: protein yippee-like At4g27745 [Cucumis melo][more]
gi|700201269|gb|KGN56402.1|1.1e-3772.73hypothetical protein Csa_3G119360 [Cucumis sativus][more]
gi|590721013|ref|XP_007051489.1|6.8e-3258.10Yippee family zinc-binding protein, putative [Theobroma cacao][more]
gi|1009156600|ref|XP_015896325.1|1.3e-3059.05PREDICTED: protein yippee-like At4g27745 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004910Yippee/Mis18/Cereblon
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g16010.1Cp4.1LG03g16010.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004910Yippee/Mis18/CereblonPFAMPF03226Yippee-Mis18coord: 50..142
score: 7.5
NoneNo IPR availablePANTHERPTHR13848FAMILY NOT NAMEDcoord: 20..144
score: 1.3
NoneNo IPR availablePANTHERPTHR13848:SF7SUBFAMILY NOT NAMEDcoord: 20..144
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g16010Cucsa.202270Cucumber (Gy14) v1cgycpeB0574
Cp4.1LG03g16010CmoCh02G011660Cucurbita moschata (Rifu)cmocpeB589
Cp4.1LG03g16010Cla004878Watermelon (97103) v1cpewmB616
Cp4.1LG03g16010ClCG05G000630Watermelon (Charleston Gray)cpewcgB559
Cp4.1LG03g16010CSPI03G07730Wild cucumber (PI 183967)cpecpiB611
Cp4.1LG03g16010CSPI05G03000Wild cucumber (PI 183967)cpecpiB624
Cp4.1LG03g16010Lsi09G000070Bottle gourd (USVL1VR-Ls)cpelsiB486
Cp4.1LG03g16010MELO3C005899.2Melon (DHL92) v3.6.1cpemedB651
Cp4.1LG03g16010CsaV3_3G007850Cucumber (Chinese Long) v3cpecucB0759
Cp4.1LG03g16010Bhi12G000579Wax gourdcpewgoB0761
Cp4.1LG03g16010CsGy3G007860Cucumber (Gy14) v2cgybcpeB406
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g16010Cp4.1LG13g03270Cucurbita pepo (Zucchini)cpecpeB217
Cp4.1LG03g16010Cp4.1LG05g05940Cucurbita pepo (Zucchini)cpecpeB479
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g16010Cucumber (Chinese Long) v3cpecucB0774
Cp4.1LG03g16010Wax gourdcpewgoB0770
Cp4.1LG03g16010Cucurbita pepo (Zucchini)cpecpeB482
Cp4.1LG03g16010Cucumber (Gy14) v1cgycpeB0682
Cp4.1LG03g16010Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g16010Cucurbita maxima (Rimu)cmacpeB639
Cp4.1LG03g16010Cucurbita maxima (Rimu)cmacpeB834
Cp4.1LG03g16010Cucurbita maxima (Rimu)cmacpeB839
Cp4.1LG03g16010Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g16010Cucurbita moschata (Rifu)cmocpeB787
Cp4.1LG03g16010Cucumber (Chinese Long) v2cpecuB609
Cp4.1LG03g16010Cucumber (Chinese Long) v2cpecuB622
Cp4.1LG03g16010Bottle gourd (USVL1VR-Ls)cpelsiB506
Cp4.1LG03g16010Watermelon (97103) v1cpewmB613
Cp4.1LG03g16010Melon (DHL92) v3.5.1cpemeB585
Cp4.1LG03g16010Cucumber (Gy14) v2cgybcpeB678
Cp4.1LG03g16010Melon (DHL92) v3.6.1cpemedB693
Cp4.1LG03g16010Silver-seed gourdcarcpeB0179
Cp4.1LG03g16010Silver-seed gourdcarcpeB1379