Cp4.1LG05g05740 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g05740
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionNascent polypeptide associated complex alpha subunit, putative
LocationCp4.1LG05 : 3484620 .. 3486420 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGATTACCGGAGCTTCTTCTCCTCGTAGTCTCTATTTGTTTCTCATGCCATTTCCTACTTCCGCCTTTCCAACTTATCTATTCATTAAGAACAATGCCGTCTGCTCCCGTCGCCGACTCCACCGAGCCTGAGAAGGAGGCCGTCCAAATCTCGTCGTCTGCAGCCGAATTAGAGAAGAAGCTTCAGGTTCTCCAATTCTTATCCTTGGATTCTGTTTTTTCTCTTACTCGGTTCGTGTTTTTCTAAATGCATTTTTGCAGTTCGATGACAAACCGGTTGTTGAAGACGTTGAGGATGACGATGACGACGATGACGACGAGGATGATGACGACGGAAAGGAGAACGGGGCTCTTGGTGAGTTACTTTCTTCTCGTCTTTTATCTTTCTTACGTTCTTTTTCCCCGAGTCTGATTCCCTGGATTATGAAATTAGTTATGAAATACAATGCAATTCTGCCGTTTTTCAAATTTTTGTCTGAGAAAAAGCAATGCAGATAGATGAATGGATGGAGCCTAATCTTCAAATTCATTCTCCTAATCTTCAAATTCTTTCTGCCTCTTCATATTTTCTGCTACTAAACGATTTTGAACCCTGAATCTTTTGATGTTAAATTAGGTTTCTGTGATTAACTGAGATGTAGATTGTTTTGATTTTTATTATAAGCATTGTAACCTCGTCTCTTTGGTGCCAAATTTCTGTTTTATAATTGGACATTGTCTATAACATTTACATGATACCGTTTATAGTTTGAATAGAGACTTGACATGGATACTATTTCTGCTACTAACTACGTTCGTAATCTCTGCTTCAACCTTCCTTGACGATTAAACGATGGTGTTAGTACTTATGGATCATCCAAGTCCAAGTTGTGTAGAGTTTGTTGTTTTGGACTGCTAGCTTCAGATTTCAGGTTCCAGATAATGGAATGTAATTTCTGGGAGGTTGAATCAATTTTGTTTGTTTGTTTGTTTGTATTAGACGGAGGTTCAAATGAGAGTTCAAAGCAGAGCAGGAGTGAAAAGAAGAGTCGCAAGGCGATGCTGAAGCTGGGTATGAAACCAGTTACTGGTGTTAGCAGAGTCACCATTAAAAGAACCAAGAACGTAAGCTTAAGCTTGAATCTCCATCGTCCCATGTGTTGGTCTATTTGTTTCTGTGTTACAAACTAATTTCCATGGCATTCATATTCAGATATTGTTTTTCATATCAAAACCTGATGTGTTCAAAAGTCCAAACTCTGAGACGTATGTGATATTTGGAGAGGCAAAGATAGAGGATTTGAGTTCTCAGTTGCAGACACAAGCTGCCCAGCAATTCAAGATGCCAGACATGGGACAGGTGATGGGAGGAAAATCAGAGATTTCTGGCAGTAGTGCAGCTGGAGCATTGGTTGAAGAGGAAGAGGAAGAGATTGATGAATCTGGGGTGGAGGACAGGGACATTGATTTGGTAATGACACAGGCTGGGGTGTCCAGAACCAAGGCCGTCAAGGCCCTCAAGACTCACGACGGGGACATTGTCAGTGCCATAATGGAGCTCACAACTTGAGTTGAGTAGTCTCTCCAATCCGCTCTCTTCCTTTGCTTTGGTGATTCATGAGTTCTTAATTTTCTTGCTACCTTTCTAGTTGGACTATGAGTTCAAGTTTTTGTACGTTTTTTTTGGTTGCCTTTTGCTTTAATTCTTCAAATTCCATTCATTGAGACTGCTTCATGTTGACTTGTTTCGTTTTTAGACCAATTGGATCATTTTTTTTTCTTTCTTATTGTTCGTTTATGGATATCTCTTTTGAGTTTGACA

mRNA sequence

ACGATTACCGGAGCTTCTTCTCCTCGTAGTCTCTATTTGTTTCTCATGCCATTTCCTACTTCCGCCTTTCCAACTTATCTATTCATTAAGAACAATGCCGTCTGCTCCCGTCGCCGACTCCACCGAGCCTGAGAAGGAGGCCGTCCAAATCTCGTCGTCTGCAGCCGAATTAGAGAAGAAGCTTCAGACGGAGAGTTCAAAGCAGAGCAGGAGTGAAAAGAAGAGTCGCAAGGCGATGCTGAAGCTGGGTATGAAACCAGTTACTGGTGTTAGCAGAGTCACCATTAAAAGAACCAAGAACATATTGTTTTTCATATCAAAACCTGATGTGTTCAAAAGTCCAAACTCTGAGACGTATGTGATATTTGGAGAGGCAAAGATAGAGGATTTGAGTTCTCAGTTGCAGACACAAGCTGCCCAGCAATTCAAGATGCCAGACATGGGACAGGTGATGGGAGGAAAATCAGAGATTTCTGGCAGTAGTGCAGCTGGAGCATTGGTTGAAGAGGAAGAGGAAGAGATTGATGAATCTGGGGTGGAGGACAGGGACATTGATTTGGTAATGACACAGGCTGGGGTGTCCAGAACCAAGGCCGTCAAGGCCCTCAAGACTCACGACGGGGACATTGTCAGTGCCATAATGGAGCTCACAACTTGAGTTGAGTAGTCTCTCCAATCCGCTCTCTTCCTTTGCTTTGGTGATTCATGAGTTCTTAATTTTCTTGCTACCTTTCTAGTTGGACTATGAGTTCAAGTTTTTGTACGTTTTTTTTGGTTGCCTTTTGCTTTAATTCTTCAAATTCCATTCATTGAGACTGCTTCATGTTGACTTGTTTCGTTTTTAGACCAATTGGATCATTTTTTTTTCTTTCTTATTGTTCGTTTATGGATATCTCTTTTGAGTTTGACA

Coding sequence (CDS)

ATGCCGTCTGCTCCCGTCGCCGACTCCACCGAGCCTGAGAAGGAGGCCGTCCAAATCTCGTCGTCTGCAGCCGAATTAGAGAAGAAGCTTCAGACGGAGAGTTCAAAGCAGAGCAGGAGTGAAAAGAAGAGTCGCAAGGCGATGCTGAAGCTGGGTATGAAACCAGTTACTGGTGTTAGCAGAGTCACCATTAAAAGAACCAAGAACATATTGTTTTTCATATCAAAACCTGATGTGTTCAAAAGTCCAAACTCTGAGACGTATGTGATATTTGGAGAGGCAAAGATAGAGGATTTGAGTTCTCAGTTGCAGACACAAGCTGCCCAGCAATTCAAGATGCCAGACATGGGACAGGTGATGGGAGGAAAATCAGAGATTTCTGGCAGTAGTGCAGCTGGAGCATTGGTTGAAGAGGAAGAGGAAGAGATTGATGAATCTGGGGTGGAGGACAGGGACATTGATTTGGTAATGACACAGGCTGGGGTGTCCAGAACCAAGGCCGTCAAGGCCCTCAAGACTCACGACGGGGACATTGTCAGTGCCATAATGGAGCTCACAACTTGA

Protein sequence

MPSAPVADSTEPEKEAVQISSSAAELEKKLQTESSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFKMPDMGQVMGGKSEISGSSAAGALVEEEEEEIDESGVEDRDIDLVMTQAGVSRTKAVKALKTHDGDIVSAIMELTT
Homology
[Close]
BLAST of Cp4.1LG05g05740 vs. Swiss-Prot
Match: NACA2_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Arabidopsis thaliana GN=At3g49470 PE=2 SV=2)

HSP 1 Score: 231.5 bits (589), Expect = 7.6e-60
Identity = 143/216 (66.20%), Postives = 163/216 (75.46%), Query Frame = 1 

Query: 2   PSAPVADSTEPEKEAVQISSSAAELEKKLQTE---------------------------- 61
           P A V +S + + E   +++ A ELEKKLQT+                            
Sbjct: 4   PPAVVTESADGQPEQPPVTAIAEELEKKLQTDEPIVEDVKDDEDDDDDDEEEEDDDAQGV 63

Query: 62  --SSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIF 121
             SSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKN+LFFISKPDVFKSP+SETYVIF
Sbjct: 64  SGSSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNVLFFISKPDVFKSPHSETYVIF 123

Query: 122 GEAKIEDLSSQLQTQAAQQFKMPDMGQVMGGKSEISGSSAAGALVEEEEEEIDESGVEDR 181
           GEAKIEDLSSQLQTQAAQQF+MP++G     ++E S ++   A VEE+EEEIDE+GVE R
Sbjct: 124 GEAKIEDLSSQLQTQAAQQFRMPEIG-ATSQRAEAS-TATVEAQVEEDEEEIDETGVEAR 183

Query: 182 DIDLVMTQAGVSRTKAVKALKTHDGDIVSAIMELTT 188
           DIDLVMTQAGVSR+KAVKALK+HDGDIVSAIMELTT
Sbjct: 184 DIDLVMTQAGVSRSKAVKALKSHDGDIVSAIMELTT 217

[Close]
BLAST of Cp4.1LG05g05740 vs. Swiss-Prot
Match: NACA4_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 4 OS=Arabidopsis thaliana GN=At4g10480 PE=1 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 4.0e-53
Identity = 119/158 (75.32%), Postives = 136/158 (86.08%), Query Frame = 1 

Query: 31  QTESSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVI 90
           + E+SKQSRSEKKSRKAMLKLGMKPVT VSRVTIKR+KN+LF ISKPDVFKSPNSETYVI
Sbjct: 58  ENEASKQSRSEKKSRKAMLKLGMKPVTDVSRVTIKRSKNVLFVISKPDVFKSPNSETYVI 117

Query: 91  FGEAKIEDLSSQLQTQAAQQFKMPDMGQVMGGKSEISGSSAAG-ALVEEEEEEIDESGVE 150
           FGEAKI+D+SSQLQ QAAQ+FKMPD+  ++       GS AA  A  EE++E++DE+GVE
Sbjct: 118 FGEAKIDDMSSQLQAQAAQRFKMPDVASMI---PNTDGSEAATVAQEEEDDEDVDETGVE 177

Query: 151 DRDIDLVMTQAGVSRTKAVKALKTHDGDIVSAIMELTT 188
            +DIDLVMTQAGVSR KAVKALK  +GDIVSAIMELTT
Sbjct: 178 AKDIDLVMTQAGVSRPKAVKALKESNGDIVSAIMELTT 212

[Close]
BLAST of Cp4.1LG05g05740 vs. Swiss-Prot
Match: NACA3_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 3 OS=Arabidopsis thaliana GN=At5g13850 PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.8e-52
Identity = 111/153 (72.55%), Postives = 135/153 (88.24%), Query Frame = 1 

Query: 35  SKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEA 94
           SKQSRSEKKSRKAMLKLGMKP+TGVSRVT+K++KNILF ISKPDVFKSP S+TYVIFGEA
Sbjct: 53  SKQSRSEKKSRKAMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEA 112

Query: 95  KIEDLSSQLQTQAAQQFKMPDMGQVMGGKSEISGSSAAGALVEEEEEEIDESGVEDRDID 154
           KIEDLSSQLQ+QAA+QFK P++  V+  + E S ++ A A+ ++++EE+DE GVE +DI+
Sbjct: 113 KIEDLSSQLQSQAAEQFKAPNLSNVI-SQGETSSAATAAAVQDDDDEEVDEEGVEPKDIE 172

Query: 155 LVMTQAGVSRTKAVKALKTHDGDIVSAIMELTT 188
           LVMTQAGVS+ +AVKALK  +GDIVSAIMELTT
Sbjct: 173 LVMTQAGVSKPRAVKALKLANGDIVSAIMELTT 204

[Close]
BLAST of Cp4.1LG05g05740 vs. Swiss-Prot
Match: NACA1_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana GN=At3g12390 PE=1 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 7.6e-52
Identity = 113/153 (73.86%), Postives = 130/153 (84.97%), Query Frame = 1 

Query: 35  SKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEA 94
           SKQSRSEKKSRKAMLKLGMKP+TGVSRVT+K++KNILF ISKPDVFKSP S+TYVIFGEA
Sbjct: 57  SKQSRSEKKSRKAMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEA 116

Query: 95  KIEDLSSQLQTQAAQQFKMPDMGQVMGGKSEISGSSAAGALVEEEEEEIDESGVEDRDID 154
           KIEDLSSQ+Q+QAA+QFK PD+  V      IS   ++ A V +++EE+DE GVE +DI+
Sbjct: 117 KIEDLSSQIQSQAAEQFKAPDLSNV------ISKGESSSAAVVQDDEEVDEEGVEPKDIE 176

Query: 155 LVMTQAGVSRTKAVKALKTHDGDIVSAIMELTT 188
           LVMTQAGVSR  AVKALK  DGDIVSAIMELTT
Sbjct: 177 LVMTQAGVSRPNAVKALKAADGDIVSAIMELTT 203

[Close]
BLAST of Cp4.1LG05g05740 vs. Swiss-Prot
Match: NACA5_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 5 OS=Arabidopsis thaliana GN=At1g33040 PE=2 SV=2)

HSP 1 Score: 201.1 bits (510), Expect = 1.1e-50
Identity = 117/182 (64.29%), Postives = 144/182 (79.12%), Query Frame = 1 

Query: 6   VADSTEPEKEAVQISSSAAELEKKLQTESSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIK 65
           V D  + E+E         E+E +   E++KQSRSEKKSRKA+LKLGMKPV+ VSRVTIK
Sbjct: 30  VEDVKDGEEEDDDEDDEDVEVEGEGGNENAKQSRSEKKSRKAVLKLGMKPVSDVSRVTIK 89

Query: 66  RTKNILFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFKMPDMGQVMGGKSE 125
           R KN+LF ISKPDV+KSPN+ETYVIFGEAK++DLSSQLQTQAAQ+FKMPD+  ++     
Sbjct: 90  RAKNVLFVISKPDVYKSPNAETYVIFGEAKVDDLSSQLQTQAAQRFKMPDVTSMLPNAG- 149

Query: 126 ISGSSAAGALVEEEEEEIDESGVEDRDIDLVMTQAGVSRTKAVKALKTHDGDIVSAIMEL 185
            S ++ A    EE+E+++D++GVE RDIDLVMTQAGVS+ KAV ALK +DGDIVSAIMEL
Sbjct: 150 -SEATMAPLAEEEDEDDVDDTGVEARDIDLVMTQAGVSKAKAVSALKANDGDIVSAIMEL 209

Query: 186 TT 188
           TT
Sbjct: 210 TT 209

[Close]
BLAST of Cp4.1LG05g05740 vs. TrEMBL
Match: M5XDH4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011150mg PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 5.7e-62
Identity = 138/155 (89.03%), Postives = 146/155 (94.19%), Query Frame = 1 

Query: 33  ESSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFG 92
           ESSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPD+FKSPNSETYVIFG
Sbjct: 70  ESSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDIFKSPNSETYVIFG 129

Query: 93  EAKIEDLSSQLQTQAAQQFKMPDMGQVMGGKSEISGSSAAGALVEEEEEEIDESGVEDRD 152
           EAKIEDLSSQLQTQAAQQF+MPDM  VM  KSEIS ++AAGA  +EEEEE+DE+GVE RD
Sbjct: 130 EAKIEDLSSQLQTQAAQQFRMPDMSSVM-TKSEIS-AAAAGAQADEEEEEVDEAGVEPRD 189

Query: 153 IDLVMTQAGVSRTKAVKALKTHDGDIVSAIMELTT 188
           IDLVMTQAGVSR+KAVKALKTH GDIVSAIMELTT
Sbjct: 190 IDLVMTQAGVSRSKAVKALKTHSGDIVSAIMELTT 222

[Close]
BLAST of Cp4.1LG05g05740 vs. TrEMBL
Match: A0A061G2W1_THECC (Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Theobroma cacao GN=TCM_015524 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 2.2e-61
Identity = 137/153 (89.54%), Postives = 145/153 (94.77%), Query Frame = 1 

Query: 35  SKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEA 94
           SKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEA
Sbjct: 104 SKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEA 163

Query: 95  KIEDLSSQLQTQAAQQFKMPDMGQVMGGKSEISGSSAAGALVEEEEEEIDESGVEDRDID 154
           KIEDLSSQLQTQAAQQF+MPDMG VM  KS+ S ++AAGA  +EEEEEIDE+GVE RDID
Sbjct: 164 KIEDLSSQLQTQAAQQFRMPDMGSVM-AKSDTS-TAAAGAPADEEEEEIDETGVEPRDID 223

Query: 155 LVMTQAGVSRTKAVKALKTHDGDIVSAIMELTT 188
           LVMTQAGVSR+KAVKALKTH+GDIVSAIMELTT
Sbjct: 224 LVMTQAGVSRSKAVKALKTHNGDIVSAIMELTT 254

[Close]
BLAST of Cp4.1LG05g05740 vs. TrEMBL
Match: A0A103YEC5_CYNCS (Nascent polypeptide-associated complex NAC domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_014063 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 3.7e-61
Identity = 136/156 (87.18%), Postives = 146/156 (93.59%), Query Frame = 1 

Query: 32  TESSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIF 91
           +ESSKQSRSEKKSRKAMLKLGMKPV GVSRVTIKR KNI+FFISKPDVFKSPNSETYVIF
Sbjct: 59  SESSKQSRSEKKSRKAMLKLGMKPVLGVSRVTIKRAKNIMFFISKPDVFKSPNSETYVIF 118

Query: 92  GEAKIEDLSSQLQTQAAQQFKMPDMGQVMGGKSEISGSSAAGALVEEEEEEIDESGVEDR 151
           GEAKIEDLSSQLQTQAAQQF+MPDMG VM GKS+IS ++AA A  +EEEEE+DE+GVE R
Sbjct: 119 GEAKIEDLSSQLQTQAAQQFRMPDMGSVM-GKSDIS-AAAAAAQADEEEEEVDETGVEPR 178

Query: 152 DIDLVMTQAGVSRTKAVKALKTHDGDIVSAIMELTT 188
           DIDLVMTQAGVSR KAVKALKTH+GDIVSAIMELTT
Sbjct: 179 DIDLVMTQAGVSRPKAVKALKTHNGDIVSAIMELTT 212

[Close]
BLAST of Cp4.1LG05g05740 vs. TrEMBL
Match: V4TX43_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022215mg PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 4.8e-61
Identity = 136/157 (86.62%), Postives = 144/157 (91.72%), Query Frame = 1 

Query: 31  QTESSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVI 90
           Q  SSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVI
Sbjct: 59  QGGSSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVI 118

Query: 91  FGEAKIEDLSSQLQTQAAQQFKMPDMGQVMGGKSEISGSSAAGALVEEEEEEIDESGVED 150
           FGEAKIEDLSSQLQTQAAQQF+MPDMG VM      + S+AAGA  +EEEEE+DE+GVE 
Sbjct: 119 FGEAKIEDLSSQLQTQAAQQFRMPDMGSVMAKPD--ASSAAAGAQQDEEEEEVDETGVEP 178

Query: 151 RDIDLVMTQAGVSRTKAVKALKTHDGDIVSAIMELTT 188
           RDIDLVMTQAGVSR+KAVKALKTH+GDIVSAIMELTT
Sbjct: 179 RDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELTT 213

[Close]
BLAST of Cp4.1LG05g05740 vs. TrEMBL
Match: A0A067DT60_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028148mg PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 8.2e-61
Identity = 134/154 (87.01%), Postives = 143/154 (92.86%), Query Frame = 1 

Query: 34  SSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGE 93
           SSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGE
Sbjct: 61  SSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGE 120

Query: 94  AKIEDLSSQLQTQAAQQFKMPDMGQVMGGKSEISGSSAAGALVEEEEEEIDESGVEDRDI 153
           AKIEDLS+QLQTQAAQQF+MPDMG VM      + S+AAGA  +EEEEE+DE+GVE RDI
Sbjct: 121 AKIEDLSTQLQTQAAQQFRMPDMGSVMAKPD--ASSAAAGAQQDEEEEEVDETGVEPRDI 180

Query: 154 DLVMTQAGVSRTKAVKALKTHDGDIVSAIMELTT 188
           DLVMTQAGVSR+KAVKALKTH+GDIVSAIMELTT
Sbjct: 181 DLVMTQAGVSRSKAVKALKTHNGDIVSAIMELTT 212

[Close]
BLAST of Cp4.1LG05g05740 vs. TAIR10
Match: AT3G49470.1 (AT3G49470.1 nascent polypeptide-associated complex subunit alpha-like protein 2)

HSP 1 Score: 231.5 bits (589), Expect = 4.3e-61
Identity = 143/216 (66.20%), Postives = 163/216 (75.46%), Query Frame = 1 

Query: 2   PSAPVADSTEPEKEAVQISSSAAELEKKLQTE---------------------------- 61
           P A V +S + + E   +++ A ELEKKLQT+                            
Sbjct: 4   PPAVVTESADGQPEQPPVTAIAEELEKKLQTDEPIVEDVKDDEDDDDDDEEEEDDDAQGV 63

Query: 62  --SSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIF 121
             SSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKN+LFFISKPDVFKSP+SETYVIF
Sbjct: 64  SGSSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNVLFFISKPDVFKSPHSETYVIF 123

Query: 122 GEAKIEDLSSQLQTQAAQQFKMPDMGQVMGGKSEISGSSAAGALVEEEEEEIDESGVEDR 181
           GEAKIEDLSSQLQTQAAQQF+MP++G     ++E S ++   A VEE+EEEIDE+GVE R
Sbjct: 124 GEAKIEDLSSQLQTQAAQQFRMPEIG-ATSQRAEAS-TATVEAQVEEDEEEIDETGVEAR 183

Query: 182 DIDLVMTQAGVSRTKAVKALKTHDGDIVSAIMELTT 188
           DIDLVMTQAGVSR+KAVKALK+HDGDIVSAIMELTT
Sbjct: 184 DIDLVMTQAGVSRSKAVKALKSHDGDIVSAIMELTT 217

[Close]
BLAST of Cp4.1LG05g05740 vs. TAIR10
Match: AT4G10480.1 (AT4G10480.1 Nascent polypeptide-associated complex (NAC), alpha subunit family protein)

HSP 1 Score: 209.1 bits (531), Expect = 2.3e-54
Identity = 119/158 (75.32%), Postives = 136/158 (86.08%), Query Frame = 1 

Query: 31  QTESSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVI 90
           + E+SKQSRSEKKSRKAMLKLGMKPVT VSRVTIKR+KN+LF ISKPDVFKSPNSETYVI
Sbjct: 58  ENEASKQSRSEKKSRKAMLKLGMKPVTDVSRVTIKRSKNVLFVISKPDVFKSPNSETYVI 117

Query: 91  FGEAKIEDLSSQLQTQAAQQFKMPDMGQVMGGKSEISGSSAAG-ALVEEEEEEIDESGVE 150
           FGEAKI+D+SSQLQ QAAQ+FKMPD+  ++       GS AA  A  EE++E++DE+GVE
Sbjct: 118 FGEAKIDDMSSQLQAQAAQRFKMPDVASMI---PNTDGSEAATVAQEEEDDEDVDETGVE 177

Query: 151 DRDIDLVMTQAGVSRTKAVKALKTHDGDIVSAIMELTT 188
            +DIDLVMTQAGVSR KAVKALK  +GDIVSAIMELTT
Sbjct: 178 AKDIDLVMTQAGVSRPKAVKALKESNGDIVSAIMELTT 212

[Close]
BLAST of Cp4.1LG05g05740 vs. TAIR10
Match: AT5G13850.1 (AT5G13850.1 nascent polypeptide-associated complex subunit alpha-like protein 3)

HSP 1 Score: 205.3 bits (521), Expect = 3.3e-53
Identity = 111/153 (72.55%), Postives = 135/153 (88.24%), Query Frame = 1 

Query: 35  SKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEA 94
           SKQSRSEKKSRKAMLKLGMKP+TGVSRVT+K++KNILF ISKPDVFKSP S+TYVIFGEA
Sbjct: 53  SKQSRSEKKSRKAMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEA 112

Query: 95  KIEDLSSQLQTQAAQQFKMPDMGQVMGGKSEISGSSAAGALVEEEEEEIDESGVEDRDID 154
           KIEDLSSQLQ+QAA+QFK P++  V+  + E S ++ A A+ ++++EE+DE GVE +DI+
Sbjct: 113 KIEDLSSQLQSQAAEQFKAPNLSNVI-SQGETSSAATAAAVQDDDDEEVDEEGVEPKDIE 172

Query: 155 LVMTQAGVSRTKAVKALKTHDGDIVSAIMELTT 188
           LVMTQAGVS+ +AVKALK  +GDIVSAIMELTT
Sbjct: 173 LVMTQAGVSKPRAVKALKLANGDIVSAIMELTT 204

[Close]
BLAST of Cp4.1LG05g05740 vs. TAIR10
Match: AT3G12390.1 (AT3G12390.1 Nascent polypeptide-associated complex (NAC), alpha subunit family protein)

HSP 1 Score: 204.9 bits (520), Expect = 4.3e-53
Identity = 113/153 (73.86%), Postives = 130/153 (84.97%), Query Frame = 1 

Query: 35  SKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEA 94
           SKQSRSEKKSRKAMLKLGMKP+TGVSRVT+K++KNILF ISKPDVFKSP S+TYVIFGEA
Sbjct: 57  SKQSRSEKKSRKAMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEA 116

Query: 95  KIEDLSSQLQTQAAQQFKMPDMGQVMGGKSEISGSSAAGALVEEEEEEIDESGVEDRDID 154
           KIEDLSSQ+Q+QAA+QFK PD+  V      IS   ++ A V +++EE+DE GVE +DI+
Sbjct: 117 KIEDLSSQIQSQAAEQFKAPDLSNV------ISKGESSSAAVVQDDEEVDEEGVEPKDIE 176

Query: 155 LVMTQAGVSRTKAVKALKTHDGDIVSAIMELTT 188
           LVMTQAGVSR  AVKALK  DGDIVSAIMELTT
Sbjct: 177 LVMTQAGVSRPNAVKALKAADGDIVSAIMELTT 203

[Close]
BLAST of Cp4.1LG05g05740 vs. TAIR10
Match: AT1G33040.1 (AT1G33040.1 nascent polypeptide-associated complex subunit alpha-like protein 5)

HSP 1 Score: 201.1 bits (510), Expect = 6.2e-52
Identity = 117/182 (64.29%), Postives = 144/182 (79.12%), Query Frame = 1 

Query: 6   VADSTEPEKEAVQISSSAAELEKKLQTESSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIK 65
           V D  + E+E         E+E +   E++KQSRSEKKSRKA+LKLGMKPV+ VSRVTIK
Sbjct: 30  VEDVKDGEEEDDDEDDEDVEVEGEGGNENAKQSRSEKKSRKAVLKLGMKPVSDVSRVTIK 89

Query: 66  RTKNILFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFKMPDMGQVMGGKSE 125
           R KN+LF ISKPDV+KSPN+ETYVIFGEAK++DLSSQLQTQAAQ+FKMPD+  ++     
Sbjct: 90  RAKNVLFVISKPDVYKSPNAETYVIFGEAKVDDLSSQLQTQAAQRFKMPDVTSMLPNAG- 149

Query: 126 ISGSSAAGALVEEEEEEIDESGVEDRDIDLVMTQAGVSRTKAVKALKTHDGDIVSAIMEL 185
            S ++ A    EE+E+++D++GVE RDIDLVMTQAGVS+ KAV ALK +DGDIVSAIMEL
Sbjct: 150 -SEATMAPLAEEEDEDDVDDTGVEARDIDLVMTQAGVSKAKAVSALKANDGDIVSAIMEL 209

Query: 186 TT 188
           TT
Sbjct: 210 TT 209

[Close]
BLAST of Cp4.1LG05g05740 vs. NCBI nr
Match: gi|645257910|ref|XP_008234632.1| (PREDICTED: nascent polypeptide-associated complex subunit alpha-like protein 2 [Prunus mume])

HSP 1 Score: 246.1 bits (627), Expect = 4.8e-62
Identity = 138/155 (89.03%), Postives = 146/155 (94.19%), Query Frame = 1 

Query: 33  ESSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFG 92
           ESSKQSRSEKKSRKAMLKLGMKPVTG+SRVTIKRTKNILFFISKPDVFKSPNSETYVIFG
Sbjct: 70  ESSKQSRSEKKSRKAMLKLGMKPVTGISRVTIKRTKNILFFISKPDVFKSPNSETYVIFG 129

Query: 93  EAKIEDLSSQLQTQAAQQFKMPDMGQVMGGKSEISGSSAAGALVEEEEEEIDESGVEDRD 152
           EAKIEDLSSQLQTQAAQQF+MPDM  VM  KSEIS ++AAGA  +EEEEE+DE+GVE RD
Sbjct: 130 EAKIEDLSSQLQTQAAQQFRMPDMSSVM-AKSEIS-AAAAGAQADEEEEEVDEAGVEPRD 189

Query: 153 IDLVMTQAGVSRTKAVKALKTHDGDIVSAIMELTT 188
           IDLVMTQAGVSR+KAVKALKTH GDIVSAIMELTT
Sbjct: 190 IDLVMTQAGVSRSKAVKALKTHSGDIVSAIMELTT 222

[Close]
BLAST of Cp4.1LG05g05740 vs. NCBI nr
Match: gi|596005360|ref|XP_007218364.1| (hypothetical protein PRUPE_ppa011150mg [Prunus persica])

HSP 1 Score: 245.4 bits (625), Expect = 8.1e-62
Identity = 138/155 (89.03%), Postives = 146/155 (94.19%), Query Frame = 1 

Query: 33  ESSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFG 92
           ESSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPD+FKSPNSETYVIFG
Sbjct: 70  ESSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDIFKSPNSETYVIFG 129

Query: 93  EAKIEDLSSQLQTQAAQQFKMPDMGQVMGGKSEISGSSAAGALVEEEEEEIDESGVEDRD 152
           EAKIEDLSSQLQTQAAQQF+MPDM  VM  KSEIS ++AAGA  +EEEEE+DE+GVE RD
Sbjct: 130 EAKIEDLSSQLQTQAAQQFRMPDMSSVM-TKSEIS-AAAAGAQADEEEEEVDEAGVEPRD 189

Query: 153 IDLVMTQAGVSRTKAVKALKTHDGDIVSAIMELTT 188
           IDLVMTQAGVSR+KAVKALKTH GDIVSAIMELTT
Sbjct: 190 IDLVMTQAGVSRSKAVKALKTHSGDIVSAIMELTT 222

[Close]
BLAST of Cp4.1LG05g05740 vs. NCBI nr
Match: gi|590674613|ref|XP_007039217.1| (Nascent polypeptide-associated complex subunit alpha-like protein 2 [Theobroma cacao])

HSP 1 Score: 243.4 bits (620), Expect = 3.1e-61
Identity = 137/153 (89.54%), Postives = 145/153 (94.77%), Query Frame = 1 

Query: 35  SKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEA 94
           SKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEA
Sbjct: 104 SKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEA 163

Query: 95  KIEDLSSQLQTQAAQQFKMPDMGQVMGGKSEISGSSAAGALVEEEEEEIDESGVEDRDID 154
           KIEDLSSQLQTQAAQQF+MPDMG VM  KS+ S ++AAGA  +EEEEEIDE+GVE RDID
Sbjct: 164 KIEDLSSQLQTQAAQQFRMPDMGSVM-AKSDTS-TAAAGAPADEEEEEIDETGVEPRDID 223

Query: 155 LVMTQAGVSRTKAVKALKTHDGDIVSAIMELTT 188
           LVMTQAGVSR+KAVKALKTH+GDIVSAIMELTT
Sbjct: 224 LVMTQAGVSRSKAVKALKTHNGDIVSAIMELTT 254

[Close]
BLAST of Cp4.1LG05g05740 vs. NCBI nr
Match: gi|976923178|gb|KVI07522.1| (Nascent polypeptide-associated complex NAC domain-containing protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 242.7 bits (618), Expect = 5.3e-61
Identity = 136/156 (87.18%), Postives = 146/156 (93.59%), Query Frame = 1 

Query: 32  TESSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIF 91
           +ESSKQSRSEKKSRKAMLKLGMKPV GVSRVTIKR KNI+FFISKPDVFKSPNSETYVIF
Sbjct: 59  SESSKQSRSEKKSRKAMLKLGMKPVLGVSRVTIKRAKNIMFFISKPDVFKSPNSETYVIF 118

Query: 92  GEAKIEDLSSQLQTQAAQQFKMPDMGQVMGGKSEISGSSAAGALVEEEEEEIDESGVEDR 151
           GEAKIEDLSSQLQTQAAQQF+MPDMG VM GKS+IS ++AA A  +EEEEE+DE+GVE R
Sbjct: 119 GEAKIEDLSSQLQTQAAQQFRMPDMGSVM-GKSDIS-AAAAAAQADEEEEEVDETGVEPR 178

Query: 152 DIDLVMTQAGVSRTKAVKALKTHDGDIVSAIMELTT 188
           DIDLVMTQAGVSR KAVKALKTH+GDIVSAIMELTT
Sbjct: 179 DIDLVMTQAGVSRPKAVKALKTHNGDIVSAIMELTT 212

[Close]
BLAST of Cp4.1LG05g05740 vs. NCBI nr
Match: gi|567897556|ref|XP_006441266.1| (hypothetical protein CICLE_v10022215mg [Citrus clementina])

HSP 1 Score: 242.3 bits (617), Expect = 6.9e-61
Identity = 136/157 (86.62%), Postives = 144/157 (91.72%), Query Frame = 1 

Query: 31  QTESSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVI 90
           Q  SSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVI
Sbjct: 59  QGGSSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVI 118

Query: 91  FGEAKIEDLSSQLQTQAAQQFKMPDMGQVMGGKSEISGSSAAGALVEEEEEEIDESGVED 150
           FGEAKIEDLSSQLQTQAAQQF+MPDMG VM      + S+AAGA  +EEEEE+DE+GVE 
Sbjct: 119 FGEAKIEDLSSQLQTQAAQQFRMPDMGSVMAKPD--ASSAAAGAQQDEEEEEVDETGVEP 178

Query: 151 RDIDLVMTQAGVSRTKAVKALKTHDGDIVSAIMELTT 188
           RDIDLVMTQAGVSR+KAVKALKTH+GDIVSAIMELTT
Sbjct: 179 RDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELTT 213

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g05740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NACA2_ARATH7.6e-6066.20Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Arabidops... [more]
NACA4_ARATH4.0e-5375.32Nascent polypeptide-associated complex subunit alpha-like protein 4 OS=Arabidops... [more]
NACA3_ARATH5.8e-5272.55Nascent polypeptide-associated complex subunit alpha-like protein 3 OS=Arabidops... [more]
NACA1_ARATH7.6e-5273.86Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidops... [more]
NACA5_ARATH1.1e-5064.29Nascent polypeptide-associated complex subunit alpha-like protein 5 OS=Arabidops... [more]
BLAST of Cp4.1LG05g05740 vs. TrEMBL
Match NameE-valueIdentityDescription
M5XDH4_PRUPE5.7e-6289.03Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011150mg PE=4 SV=1[more]
A0A061G2W1_THECC2.2e-6189.54Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Theobroma... [more]
A0A103YEC5_CYNCS3.7e-6187.18Nascent polypeptide-associated complex NAC domain-containing protein OS=Cynara c... [more]
V4TX43_9ROSI4.8e-6186.62Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022215mg PE=4 SV=1[more]
A0A067DT60_CITSI8.2e-6187.01Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028148mg PE=4 SV=1[more]
BLAST of Cp4.1LG05g05740 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G49470.14.3e-6166.20 nascent polypeptide-associated complex subunit alpha-like protein 2[more]
AT4G10480.12.3e-5475.32 Nascent polypeptide-associated complex (NAC), alpha subunit family p... [more]
AT5G13850.13.3e-5372.55 nascent polypeptide-associated complex subunit alpha-like protein 3[more]
AT3G12390.14.3e-5373.86 Nascent polypeptide-associated complex (NAC), alpha subunit family p... [more]
AT1G33040.16.2e-5264.29 nascent polypeptide-associated complex subunit alpha-like protein 5[more]
BLAST of Cp4.1LG05g05740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|645257910|ref|XP_008234632.1|4.8e-6289.03PREDICTED: nascent polypeptide-associated complex subunit alpha-like protein 2 [... [more]
gi|596005360|ref|XP_007218364.1|8.1e-6289.03hypothetical protein PRUPE_ppa011150mg [Prunus persica][more]
gi|590674613|ref|XP_007039217.1|3.1e-6189.54Nascent polypeptide-associated complex subunit alpha-like protein 2 [Theobroma c... [more]
gi|976923178|gb|KVI07522.1|5.3e-6187.18Nascent polypeptide-associated complex NAC domain-containing protein [Cynara car... [more]
gi|567897556|ref|XP_006441266.1|6.9e-6186.62hypothetical protein CICLE_v10022215mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016641EGD2/NACA
IPR002715Nas_poly-pep-assoc_cplx_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005829 cytosol
cellular_component GO:0005854 nascent polypeptide-associated complex
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g05740.1Cp4.1LG05g05740.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002715Nascent polypeptide-associated complex NAC domainPFAMPF01849NACcoord: 41..96
score: 3.6
IPR002715Nascent polypeptide-associated complex NAC domainSMARTSM01407NAC_2coord: 41..97
score: 9.2
IPR002715Nascent polypeptide-associated complex NAC domainPROFILEPS51151NAC_ABcoord: 38..103
score: 17
IPR016641Nascent polypeptide-associated complex subunit alphaPIRPIRSF015901NAC_alphacoord: 7..187
score: 3.8
IPR016641Nascent polypeptide-associated complex subunit alphaPANTHERPTHR21713NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATEDcoord: 35..187
score: 4.0E
NoneNo IPR availableunknownCoilCoilcoord: 23..43
scor
NoneNo IPR availableGENE3DG3DSA:1.10.8.10coord: 147..186
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG05g05740CmaCh02G011480Cucurbita maxima (Rimu)cmacpeB646
Cp4.1LG05g05740CmoCh02G011840Cucurbita moschata (Rifu)cmocpeB595
Cp4.1LG05g05740Carg13988Silver-seed gourdcarcpeB0718
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g05740Cucumber (Chinese Long) v3cpecucB0910
Cp4.1LG05g05740Cucumber (Chinese Long) v3cpecucB0919
Cp4.1LG05g05740Wax gourdcpewgoB0916
Cp4.1LG05g05740Cucurbita pepo (Zucchini)cpecpeB227
Cp4.1LG05g05740Cucumber (Gy14) v1cgycpeB0576
Cp4.1LG05g05740Cucurbita maxima (Rimu)cmacpeB330
Cp4.1LG05g05740Cucurbita moschata (Rifu)cmocpeB293
Cp4.1LG05g05740Wild cucumber (PI 183967)cpecpiB733
Cp4.1LG05g05740Wild cucumber (PI 183967)cpecpiB741
Cp4.1LG05g05740Cucumber (Chinese Long) v2cpecuB730
Cp4.1LG05g05740Cucumber (Chinese Long) v2cpecuB740
Cp4.1LG05g05740Watermelon (Charleston Gray)cpewcgB635
Cp4.1LG05g05740Melon (DHL92) v3.5.1cpemeB651
Cp4.1LG05g05740Cucumber (Gy14) v2cgybcpeB686
Cp4.1LG05g05740Melon (DHL92) v3.6.1cpemedB779