Carg13988 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTATTTGTTTCTCATGCCATTTCCTATTTCCGCCTTTTCAACTTATCTATTCATTAAGAACAATGCCGTCTGCTCCCGTCGCCGACTCCACCGAGCCTGAGAAGGAGGCCGTCCAAATCTCGTCGTCTGCAGCCGAATTAGAGAAGAAGCTTCAGGTTCTTCAATTCTTATCCTTGGATTCTGTTTTTTCTCTTATTCGGTTCGTGTTTTTCTAAATGCATTTTTGCAGTTCGATGACAAACCGGTTGTTGAAGACGTTGAGGATGACGACGATGACGATGACGACGAGGATGATGATGACGGAAAGGAGAACGGGGCTCTTGGTGAGTTACTTTCTTCTCGTCTTTTATCTTTCTTACGTTCTTTTTCCCCGAGTCTGATTCCCTGGATTATGAAATTAGTTATGAAATACAATGCAATTCTGCCGTTTTTCAAATTTTTGTCTGAGAAAAAGCAATGCAGATAGATGAATGGATGGAGCCTAATCTTCAAATTCTTTCTCCTAATCTTCAAATTCTTTCTCCTAATCTTCAAATTCTTTCTGCCTCTTCATATTTTCTGCTACAAAACGATTTTGAACCCTGAATTTTTTGATGTTAAATTAGGTTTCTGTAATTAACTGAGATGTACATTGTTTTGGTTTTTATTATAAGCATTGTAACCTCGTCTCTTTGGTGCCAAATTTCTGTTTTATAATTGGACATTGTCTATAACATTTACATGATACCATTTATAGTTTGAATAGAGACTTGACATGGATACTATTTCTGTTAGTAACTACGTTCGTAATCTCTGCTTCAACCTTCCTTGACGATTTAAACGATGGTGTTAGTACTTATGGATCATCCAAGTCCAAGTTGTGTAGAGTTTGTTGTTTTGGACTGCTAGTTTCAGATTTCAGGTTCCAGATAATGGAATGTAATTTCTGGGAGGTTGAATCAATTTTGTTTGTTTGTTTGTTTGTTTGTATTAGACGGAGGTTCAAATGAGAGTTCAAAGCAGAGCAGGAGTGAAAAGAAGAGTCGCAAGGCGATGCTGAAGCTGGGTATGAAACCAGTTACTGGTGTTAGCAGAGTCACCATTAAAAGAACCAAGAACGTAAGCTTAAGCTTGAATCTCCATCACCCCATGTGTTGGTCCATTTGTTTCTGCGTTACAAACTAATTTCCATGGCTTTCACATTCAGATATTGTTTTTCATATCAAAACCCGATGTGTTCAAAAGTCCAAACTCTGAGACGTATGTGATATTTGGAGAGGCAAAGATAGAGGATTTGAGTTCTCAGTTGCAGACACAAGCTGCCCAGCAATTCAAGATGCCAGACATGGGACAGGTGATGGGAGGAAAATCAGAGATTTCTGGCAGTAGTGCAGCTGGAGCGTTGGTTGAAGAGGAAGAGGAAGAGATTGATGAATCTGGGGTGGAGGACAGGGACATTGATTTGGTAATGACACAGGCTGGGGTGTCCAGAACCAAGGCCGTCAAGGCCCTCAAGACCCACGACGGGGATATTGTCAGTGCCATAATGGAGCTCACAACTTGAGTTGAGTAGTCTCTCCAATCCGCTCTCTTCCTTTGCTTTGGTGATTCATGAGTTCTTAATTTTCTTGCTACCTTTCTAGTTGGACTATGAGTTCAAGTTTTTGTACGTTTTTTTTGGTTGCCTTTTGCTTTAATTCTTCAAATTCCATTCATTGAGACTGCTTCATGTTGACTTGTTTTCGTTGTTAGACCAATTGGATCGTTTTTTTCTTTCTTATTGTTCTTTTATGGAGAGGGGTTTGGCTCTGTAGATGCTTTTGAGTTAGACAAAGAGGAAAATATTTTTCAAAAGGTATCAGAGCTAGACATCGAGTTTTTCAAAAGGTATCAGAGCTAGATATCGAATGGTGTGCCAATGGACAATGAGACGTTGGGTCTCTAAACGAGTGATTTGG CTATTTGTTTCTCATGCCATTTCCTATTTCCGCCTTTTCAACTTATCTATTCATTAAGAACAATGCCGTCTGCTCCCGTCGCCGACTCCACCGAGCCTGAGAAGGAGGCCGTCCAAATCTCGTCGTCTGCAGCCGAATTAGAGAAGAAGCTTCAGTTCGATGACAAACCGGTTGTTGAAGACGTTGAGGATGACGACGATGACGATGACGACGAGGATGATGATGACGGAAAGGAGAACGGGGCTCTTGACGGAGGTTCAAATGAGAGTTCAAAGCAGAGCAGGAGTGAAAAGAAGAGTCGCAAGGCGATGCTGAAGCTGGGTATGAAACCAGTTACTGGTGTTAGCAGAGTCACCATTAAAAGAACCAAGAACATATTGTTTTTCATATCAAAACCCGATGTGTTCAAAAGTCCAAACTCTGAGACGTATGTGATATTTGGAGAGGCAAAGATAGAGGATTTGAGTTCTCAGTTGCAGACACAAGCTGCCCAGCAATTCAAGATGCCAGACATGGGACAGGTGATGGGAGGAAAATCAGAGATTTCTGGCAGTAGTGCAGCTGGAGCGTTGGTTGAAGAGGAAGAGGAAGAGATTGATGAATCTGGGGTGGAGGACAGGGACATTGATTTGGTAATGACACAGGCTGGGGTGTCCAGAACCAAGGCCGTCAAGGCCCTCAAGACCCACGACGGGGATATTGTCAGTGCCATAATGGAGCTCACAACTTGAGTTGAGTAGTCTCTCCAATCCGCTCTCTTCCTTTGCTTTGGTGATTCATGAGTTCTTAATTTTCTTGCTACCTTTCTAGTTGGACTATGAGTTCAAGTTTTTGTACGTTTTTTTTGGTTGCCTTTTGCTTTAATTCTTCAAATTCCATTCATTGAGACTGCTTCATGTTGACTTGTTTTCGTTGTTAGACCAATTGGATCGTTTTTTTCTTTCTTATTGTTCTTTTATGGAGAGGGGTTTGGCTCTGTAGATGCTTTTGAGTTAGACAAAGAGGAAAATATTTTTCAAAAGGTATCAGAGCTAGACATCGAGTTTTTCAAAAGGTATCAGAGCTAGATATCGAATGGTGTGCCAATGGACAATGAGACGTTGGGTCTCTAAACGAGTGATTTGG ATGCCGTCTGCTCCCGTCGCCGACTCCACCGAGCCTGAGAAGGAGGCCGTCCAAATCTCGTCGTCTGCAGCCGAATTAGAGAAGAAGCTTCAGTTCGATGACAAACCGGTTGTTGAAGACGTTGAGGATGACGACGATGACGATGACGACGAGGATGATGATGACGGAAAGGAGAACGGGGCTCTTGACGGAGGTTCAAATGAGAGTTCAAAGCAGAGCAGGAGTGAAAAGAAGAGTCGCAAGGCGATGCTGAAGCTGGGTATGAAACCAGTTACTGGTGTTAGCAGAGTCACCATTAAAAGAACCAAGAACATATTGTTTTTCATATCAAAACCCGATGTGTTCAAAAGTCCAAACTCTGAGACGTATGTGATATTTGGAGAGGCAAAGATAGAGGATTTGAGTTCTCAGTTGCAGACACAAGCTGCCCAGCAATTCAAGATGCCAGACATGGGACAGGTGATGGGAGGAAAATCAGAGATTTCTGGCAGTAGTGCAGCTGGAGCGTTGGTTGAAGAGGAAGAGGAAGAGATTGATGAATCTGGGGTGGAGGACAGGGACATTGATTTGGTAATGACACAGGCTGGGGTGTCCAGAACCAAGGCCGTCAAGGCCCTCAAGACCCACGACGGGGATATTGTCAGTGCCATAATGGAGCTCACAACTTGA MPSAPVADSTEPEKEAVQISSSAAELEKKLQFDDKPVVEDVEDDDDDDDDEDDDDGKENGALDGGSNESSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFKMPDMGQVMGGKSEISGSSAAGALVEEEEEEIDESGVEDRDIDLVMTQAGVSRTKAVKALKTHDGDIVSAIMELTT
BLAST of Carg13988 vs. NCBI nr
Match: XP_022957697.1 (nascent polypeptide-associated complex subunit alpha-like protein 2 [Cucurbita moschata]) HSP 1 Score: 285.0 bits (728), Expect = 2.1e-73 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of Carg13988 vs. NCBI nr
Match: XP_023532663.1 (nascent polypeptide-associated complex subunit alpha-like protein 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 285.0 bits (728), Expect = 2.1e-73 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of Carg13988 vs. NCBI nr
Match: XP_022996418.1 (nascent polypeptide-associated complex subunit alpha-like protein 2 [Cucurbita maxima]) HSP 1 Score: 284.6 bits (727), Expect = 2.8e-73 Identity = 220/222 (99.10%), Postives = 221/222 (99.55%), Query Frame = 0
BLAST of Carg13988 vs. NCBI nr
Match: XP_022139182.1 (nascent polypeptide-associated complex subunit alpha-like protein 2 [Momordica charantia] >XP_022139183.1 nascent polypeptide-associated complex subunit alpha-like protein 2 [Momordica charantia]) HSP 1 Score: 226.5 bits (576), Expect = 9.0e-56 Identity = 198/226 (87.61%), Postives = 206/226 (91.15%), Query Frame = 0
BLAST of Carg13988 vs. NCBI nr
Match: XP_003634163.1 (PREDICTED: nascent polypeptide-associated complex subunit alpha-like protein 2 [Vitis vinifera] >CBI23098.3 unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 208.4 bits (529), Expect = 2.5e-50 Identity = 168/211 (79.62%), Postives = 182/211 (86.26%), Query Frame = 0
BLAST of Carg13988 vs. TAIR10
Match: AT3G49470.1 (nascent polypeptide-associated complex subunit alpha-like protein 2) HSP 1 Score: 192.6 bits (488), Expect = 2.6e-49 Identity = 159/221 (71.95%), Postives = 179/221 (81.00%), Query Frame = 0
BLAST of Carg13988 vs. TAIR10
Match: AT4G10480.1 (Nascent polypeptide-associated complex (NAC), alpha subunit family protein) HSP 1 Score: 172.9 bits (437), Expect = 2.1e-43 Identity = 94/137 (68.61%), Postives = 107/137 (78.10%), Query Frame = 0
BLAST of Carg13988 vs. TAIR10
Match: AT3G12390.1 (Nascent polypeptide-associated complex (NAC), alpha subunit family protein) HSP 1 Score: 172.2 bits (435), Expect = 3.7e-43 Identity = 94/137 (68.61%), Postives = 109/137 (79.56%), Query Frame = 0
BLAST of Carg13988 vs. TAIR10
Match: AT1G33040.1 (nascent polypeptide-associated complex subunit alpha-like protein 5) HSP 1 Score: 170.6 bits (431), Expect = 1.1e-42 Identity = 96/137 (70.07%), Postives = 112/137 (81.75%), Query Frame = 0
BLAST of Carg13988 vs. TAIR10
Match: AT5G13850.1 (nascent polypeptide-associated complex subunit alpha-like protein 3) HSP 1 Score: 160.6 bits (405), Expect = 1.1e-39 Identity = 100/137 (72.99%), Postives = 116/137 (84.67%), Query Frame = 0
BLAST of Carg13988 vs. Swiss-Prot
Match: sp|Q94JX9|NACA2_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At3g49470 PE=2 SV=2) HSP 1 Score: 192.6 bits (488), Expect = 4.7e-48 Identity = 159/221 (71.95%), Postives = 179/221 (81.00%), Query Frame = 0
BLAST of Carg13988 vs. Swiss-Prot
Match: sp|Q9SZY1|NACA4_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At4g10480 PE=1 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 3.9e-42 Identity = 94/137 (68.61%), Postives = 107/137 (78.10%), Query Frame = 0
BLAST of Carg13988 vs. Swiss-Prot
Match: sp|Q9LHG9|NACA1_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 6.6e-42 Identity = 94/137 (68.61%), Postives = 109/137 (79.56%), Query Frame = 0
BLAST of Carg13988 vs. Swiss-Prot
Match: sp|Q8LGC6|NACA5_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At1g33040 PE=2 SV=2) HSP 1 Score: 170.6 bits (431), Expect = 1.9e-41 Identity = 96/137 (70.07%), Postives = 112/137 (81.75%), Query Frame = 0
BLAST of Carg13988 vs. Swiss-Prot
Match: sp|Q9M612|NACA_PINTA (Nascent polypeptide-associated complex subunit alpha-like protein OS=Pinus taeda OX=3352 PE=2 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 1.6e-40 Identity = 93/137 (67.88%), Postives = 109/137 (79.56%), Query Frame = 0
BLAST of Carg13988 vs. TrEMBL
Match: tr|E0CVD7|E0CVD7_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_16s0098g00830 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 1.7e-50 Identity = 168/211 (79.62%), Postives = 182/211 (86.26%), Query Frame = 0
BLAST of Carg13988 vs. TrEMBL
Match: tr|A0A2C9WHR8|A0A2C9WHR8_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G043900 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 1.1e-49 Identity = 180/223 (80.72%), Postives = 198/223 (88.79%), Query Frame = 0
BLAST of Carg13988 vs. TrEMBL
Match: tr|A0A2R6RQF6|A0A2R6RQF6_ACTCH (Nascent polypeptide-associated complex subunit alpha-like protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc02577 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.4e-49 Identity = 109/137 (79.56%), Postives = 119/137 (86.86%), Query Frame = 0
BLAST of Carg13988 vs. TrEMBL
Match: tr|K4BHZ2|K4BHZ2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101252667 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 4.1e-49 Identity = 110/137 (80.29%), Postives = 119/137 (86.86%), Query Frame = 0
BLAST of Carg13988 vs. TrEMBL
Match: tr|A0A2J6MJC3|A0A2J6MJC3_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_0X9821 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 1.6e-48 Identity = 122/136 (89.71%), Postives = 126/136 (92.65%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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