Cp4.1LG05g05740.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACGATTACCGGAGCTTCTTCTCCTCGTAGTCTCTATTTGTTTCTCATGCCATTTCCTACTTCCGCCTTTCCAACTTATCTATTCATTAAGAACAATGCCGTCTGCTCCCGTCGCCGACTCCACCGAGCCTGAGAAGGAGGCCGTCCAAATCTCGTCGTCTGCAGCCGAATTAGAGAAGAAGCTTCAGGTTCTCCAATTCTTATCCTTGGATTCTGTTTTTTCTCTTACTCGGTTCGTGTTTTTCTAAATGCATTTTTGCAGTTCGATGACAAACCGGTTGTTGAAGACGTTGAGGATGACGATGACGACGATGACGACGAGGATGATGACGACGGAAAGGAGAACGGGGCTCTTGGTGAGTTACTTTCTTCTCGTCTTTTATCTTTCTTACGTTCTTTTTCCCCGAGTCTGATTCCCTGGATTATGAAATTAGTTATGAAATACAATGCAATTCTGCCGTTTTTCAAATTTTTGTCTGAGAAAAAGCAATGCAGATAGATGAATGGATGGAGCCTAATCTTCAAATTCATTCTCCTAATCTTCAAATTCTTTCTGCCTCTTCATATTTTCTGCTACTAAACGATTTTGAACCCTGAATCTTTTGATGTTAAATTAGGTTTCTGTGATTAACTGAGATGTAGATTGTTTTGATTTTTATTATAAGCATTGTAACCTCGTCTCTTTGGTGCCAAATTTCTGTTTTATAATTGGACATTGTCTATAACATTTACATGATACCGTTTATAGTTTGAATAGAGACTTGACATGGATACTATTTCTGCTACTAACTACGTTCGTAATCTCTGCTTCAACCTTCCTTGACGATTAAACGATGGTGTTAGTACTTATGGATCATCCAAGTCCAAGTTGTGTAGAGTTTGTTGTTTTGGACTGCTAGCTTCAGATTTCAGGTTCCAGATAATGGAATGTAATTTCTGGGAGGTTGAATCAATTTTGTTTGTTTGTTTGTTTGTATTAGACGGAGGTTCAAATGAGAGTTCAAAGCAGAGCAGGAGTGAAAAGAAGAGTCGCAAGGCGATGCTGAAGCTGGGTATGAAACCAGTTACTGGTGTTAGCAGAGTCACCATTAAAAGAACCAAGAACGTAAGCTTAAGCTTGAATCTCCATCGTCCCATGTGTTGGTCTATTTGTTTCTGTGTTACAAACTAATTTCCATGGCATTCATATTCAGATATTGTTTTTCATATCAAAACCTGATGTGTTCAAAAGTCCAAACTCTGAGACGTATGTGATATTTGGAGAGGCAAAGATAGAGGATTTGAGTTCTCAGTTGCAGACACAAGCTGCCCAGCAATTCAAGATGCCAGACATGGGACAGGTGATGGGAGGAAAATCAGAGATTTCTGGCAGTAGTGCAGCTGGAGCATTGGTTGAAGAGGAAGAGGAAGAGATTGATGAATCTGGGGTGGAGGACAGGGACATTGATTTGGTAATGACACAGGCTGGGGTGTCCAGAACCAAGGCCGTCAAGGCCCTCAAGACTCACGACGGGGACATTGTCAGTGCCATAATGGAGCTCACAACTTGAGTTGAGTAGTCTCTCCAATCCGCTCTCTTCCTTTGCTTTGGTGATTCATGAGTTCTTAATTTTCTTGCTACCTTTCTAGTTGGACTATGAGTTCAAGTTTTTGTACGTTTTTTTTGGTTGCCTTTTGCTTTAATTCTTCAAATTCCATTCATTGAGACTGCTTCATGTTGACTTGTTTCGTTTTTAGACCAATTGGATCATTTTTTTTTCTTTCTTATTGTTCGTTTATGGATATCTCTTTTGAGTTTGACA ACGATTACCGGAGCTTCTTCTCCTCGTAGTCTCTATTTGTTTCTCATGCCATTTCCTACTTCCGCCTTTCCAACTTATCTATTCATTAAGAACAATGCCGTCTGCTCCCGTCGCCGACTCCACCGAGCCTGAGAAGGAGGCCGTCCAAATCTCGTCGTCTGCAGCCGAATTAGAGAAGAAGCTTCAGACGGAGAGTTCAAAGCAGAGCAGGAGTGAAAAGAAGAGTCGCAAGGCGATGCTGAAGCTGGGTATGAAACCAGTTACTGGTGTTAGCAGAGTCACCATTAAAAGAACCAAGAACATATTGTTTTTCATATCAAAACCTGATGTGTTCAAAAGTCCAAACTCTGAGACGTATGTGATATTTGGAGAGGCAAAGATAGAGGATTTGAGTTCTCAGTTGCAGACACAAGCTGCCCAGCAATTCAAGATGCCAGACATGGGACAGGTGATGGGAGGAAAATCAGAGATTTCTGGCAGTAGTGCAGCTGGAGCATTGGTTGAAGAGGAAGAGGAAGAGATTGATGAATCTGGGGTGGAGGACAGGGACATTGATTTGGTAATGACACAGGCTGGGGTGTCCAGAACCAAGGCCGTCAAGGCCCTCAAGACTCACGACGGGGACATTGTCAGTGCCATAATGGAGCTCACAACTTGAGTTGAGTAGTCTCTCCAATCCGCTCTCTTCCTTTGCTTTGGTGATTCATGAGTTCTTAATTTTCTTGCTACCTTTCTAGTTGGACTATGAGTTCAAGTTTTTGTACGTTTTTTTTGGTTGCCTTTTGCTTTAATTCTTCAAATTCCATTCATTGAGACTGCTTCATGTTGACTTGTTTCGTTTTTAGACCAATTGGATCATTTTTTTTTCTTTCTTATTGTTCGTTTATGGATATCTCTTTTGAGTTTGACA ATGCCGTCTGCTCCCGTCGCCGACTCCACCGAGCCTGAGAAGGAGGCCGTCCAAATCTCGTCGTCTGCAGCCGAATTAGAGAAGAAGCTTCAGACGGAGAGTTCAAAGCAGAGCAGGAGTGAAAAGAAGAGTCGCAAGGCGATGCTGAAGCTGGGTATGAAACCAGTTACTGGTGTTAGCAGAGTCACCATTAAAAGAACCAAGAACATATTGTTTTTCATATCAAAACCTGATGTGTTCAAAAGTCCAAACTCTGAGACGTATGTGATATTTGGAGAGGCAAAGATAGAGGATTTGAGTTCTCAGTTGCAGACACAAGCTGCCCAGCAATTCAAGATGCCAGACATGGGACAGGTGATGGGAGGAAAATCAGAGATTTCTGGCAGTAGTGCAGCTGGAGCATTGGTTGAAGAGGAAGAGGAAGAGATTGATGAATCTGGGGTGGAGGACAGGGACATTGATTTGGTAATGACACAGGCTGGGGTGTCCAGAACCAAGGCCGTCAAGGCCCTCAAGACTCACGACGGGGACATTGTCAGTGCCATAATGGAGCTCACAACTTGA MPSAPVADSTEPEKEAVQISSSAAELEKKLQTESSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFKMPDMGQVMGGKSEISGSSAAGALVEEEEEEIDESGVEDRDIDLVMTQAGVSRTKAVKALKTHDGDIVSAIMELTT
BLAST of Cp4.1LG05g05740.1 vs. Swiss-Prot
Match: NACA2_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Arabidopsis thaliana GN=At3g49470 PE=2 SV=2) HSP 1 Score: 231.5 bits (589), Expect = 7.6e-60 Identity = 143/216 (66.20%), Postives = 163/216 (75.46%), Query Frame = 1
BLAST of Cp4.1LG05g05740.1 vs. Swiss-Prot
Match: NACA4_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 4 OS=Arabidopsis thaliana GN=At4g10480 PE=1 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 4.0e-53 Identity = 119/158 (75.32%), Postives = 136/158 (86.08%), Query Frame = 1
BLAST of Cp4.1LG05g05740.1 vs. Swiss-Prot
Match: NACA3_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 3 OS=Arabidopsis thaliana GN=At5g13850 PE=1 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 5.8e-52 Identity = 111/153 (72.55%), Postives = 135/153 (88.24%), Query Frame = 1
BLAST of Cp4.1LG05g05740.1 vs. Swiss-Prot
Match: NACA1_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana GN=At3g12390 PE=1 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 7.6e-52 Identity = 113/153 (73.86%), Postives = 130/153 (84.97%), Query Frame = 1
BLAST of Cp4.1LG05g05740.1 vs. Swiss-Prot
Match: NACA5_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 5 OS=Arabidopsis thaliana GN=At1g33040 PE=2 SV=2) HSP 1 Score: 201.1 bits (510), Expect = 1.1e-50 Identity = 117/182 (64.29%), Postives = 144/182 (79.12%), Query Frame = 1
BLAST of Cp4.1LG05g05740.1 vs. TrEMBL
Match: M5XDH4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011150mg PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 5.7e-62 Identity = 138/155 (89.03%), Postives = 146/155 (94.19%), Query Frame = 1
BLAST of Cp4.1LG05g05740.1 vs. TrEMBL
Match: A0A061G2W1_THECC (Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Theobroma cacao GN=TCM_015524 PE=4 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 2.2e-61 Identity = 137/153 (89.54%), Postives = 145/153 (94.77%), Query Frame = 1
BLAST of Cp4.1LG05g05740.1 vs. TrEMBL
Match: A0A103YEC5_CYNCS (Nascent polypeptide-associated complex NAC domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_014063 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 3.7e-61 Identity = 136/156 (87.18%), Postives = 146/156 (93.59%), Query Frame = 1
BLAST of Cp4.1LG05g05740.1 vs. TrEMBL
Match: V4TX43_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022215mg PE=4 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 4.8e-61 Identity = 136/157 (86.62%), Postives = 144/157 (91.72%), Query Frame = 1
BLAST of Cp4.1LG05g05740.1 vs. TrEMBL
Match: A0A067DT60_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028148mg PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 8.2e-61 Identity = 134/154 (87.01%), Postives = 143/154 (92.86%), Query Frame = 1
BLAST of Cp4.1LG05g05740.1 vs. TAIR10
Match: AT3G49470.1 (AT3G49470.1 nascent polypeptide-associated complex subunit alpha-like protein 2) HSP 1 Score: 231.5 bits (589), Expect = 4.3e-61 Identity = 143/216 (66.20%), Postives = 163/216 (75.46%), Query Frame = 1
BLAST of Cp4.1LG05g05740.1 vs. TAIR10
Match: AT4G10480.1 (AT4G10480.1 Nascent polypeptide-associated complex (NAC), alpha subunit family protein) HSP 1 Score: 209.1 bits (531), Expect = 2.3e-54 Identity = 119/158 (75.32%), Postives = 136/158 (86.08%), Query Frame = 1
BLAST of Cp4.1LG05g05740.1 vs. TAIR10
Match: AT5G13850.1 (AT5G13850.1 nascent polypeptide-associated complex subunit alpha-like protein 3) HSP 1 Score: 205.3 bits (521), Expect = 3.3e-53 Identity = 111/153 (72.55%), Postives = 135/153 (88.24%), Query Frame = 1
BLAST of Cp4.1LG05g05740.1 vs. TAIR10
Match: AT3G12390.1 (AT3G12390.1 Nascent polypeptide-associated complex (NAC), alpha subunit family protein) HSP 1 Score: 204.9 bits (520), Expect = 4.3e-53 Identity = 113/153 (73.86%), Postives = 130/153 (84.97%), Query Frame = 1
BLAST of Cp4.1LG05g05740.1 vs. TAIR10
Match: AT1G33040.1 (AT1G33040.1 nascent polypeptide-associated complex subunit alpha-like protein 5) HSP 1 Score: 201.1 bits (510), Expect = 6.2e-52 Identity = 117/182 (64.29%), Postives = 144/182 (79.12%), Query Frame = 1
BLAST of Cp4.1LG05g05740.1 vs. NCBI nr
Match: gi|645257910|ref|XP_008234632.1| (PREDICTED: nascent polypeptide-associated complex subunit alpha-like protein 2 [Prunus mume]) HSP 1 Score: 246.1 bits (627), Expect = 4.8e-62 Identity = 138/155 (89.03%), Postives = 146/155 (94.19%), Query Frame = 1
BLAST of Cp4.1LG05g05740.1 vs. NCBI nr
Match: gi|596005360|ref|XP_007218364.1| (hypothetical protein PRUPE_ppa011150mg [Prunus persica]) HSP 1 Score: 245.4 bits (625), Expect = 8.1e-62 Identity = 138/155 (89.03%), Postives = 146/155 (94.19%), Query Frame = 1
BLAST of Cp4.1LG05g05740.1 vs. NCBI nr
Match: gi|590674613|ref|XP_007039217.1| (Nascent polypeptide-associated complex subunit alpha-like protein 2 [Theobroma cacao]) HSP 1 Score: 243.4 bits (620), Expect = 3.1e-61 Identity = 137/153 (89.54%), Postives = 145/153 (94.77%), Query Frame = 1
BLAST of Cp4.1LG05g05740.1 vs. NCBI nr
Match: gi|976923178|gb|KVI07522.1| (Nascent polypeptide-associated complex NAC domain-containing protein [Cynara cardunculus var. scolymus]) HSP 1 Score: 242.7 bits (618), Expect = 5.3e-61 Identity = 136/156 (87.18%), Postives = 146/156 (93.59%), Query Frame = 1
BLAST of Cp4.1LG05g05740.1 vs. NCBI nr
Match: gi|567897556|ref|XP_006441266.1| (hypothetical protein CICLE_v10022215mg [Citrus clementina]) HSP 1 Score: 242.3 bits (617), Expect = 6.9e-61 Identity = 136/157 (86.62%), Postives = 144/157 (91.72%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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