Cp4.1LG05g05440 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g05440
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionNon-structural maintenance of chromosomes element 1 like
LocationCp4.1LG05 : 3245111 .. 3249750 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATCCTCCCACCATGTAAAAGCGGCTATCCAGCGCTAGGCTTCACTTCCCGGAGAGTCTTTGAAAATTTTCCCGCACAAACTCTTCTCTTCTATGAGTTTGGCTGAAATTCCCTTACAGAATCAACCTTGTCTGAATCTTTGAAGTATTAGTTGACCTTGAATTAGGGTTCAGAATGCGGGAGCTGAGTTGGAGACATCACACTCTCATTCAAGCGCTTCTCGCTCGCGGCCCACTCAGAGAGGATCACTTCCATTTGCTGTTTACGCGGATCACTGAAAAGAGTCCAGGTTTTAATTTCTTTCTCCTTCCCCAGTTTGGTATTCAAGTTGGGAAGTAATGATTTAACGGTATGGAGACCTGCTCGATTTTTTTCTAACAAATGATCGAGGATGTCTTTCTTAGATCATCTGTAAAAGATGCGTTTGAGTTCTTATAAATTCATGTTCAAAGATTACCGAATATTTGCAATAGAATGGTTTCTGAGTATAATATGGAACCACATATTGGAAGAAATTGCATCTGGGTTCATATCCGTATACGTTTTGGAAATGTGTATTCTTATATCTTTCCTTAATCATTAGCATAAACGATTGAAAAGGAAGAGTGTTTTTAATTGATAAATTGGCCGACGGTTGAAAACTAAGATCTGTTCGATGTTTATTTTGGTGCAGATAATGACCGGCAGCTTTTTAATAATTACCTCCTGACGATGAACAAAGCACTTTCTTTTGCTCAATTTGAGTTGCGAGGCTGCAGAAACCAATATGATGGTCGTGTTTACTATGGCTTGGTCAATAATGTATCCGATGAACAATCCAAGCTAGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTGAGTTATCAACTATGGGAAGTATTGGCGTTCTTCAATAAACTGACCATTCTGCCAATTTGCTTAGCAATTAACTATGGGAACTTAGTGTTTACAATATATGCATCTTTTGTTTTATTGTCGTAGTATTTCTTATAAACAAAAAATTGCTATGTCAGGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGTGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGGTTCCTCTTGCTTGTATATGACCAATATTACCGTTTTGAGTCTATTATTGTCAAAGTCAGCTGCATATTTAACTAAGGTTGGCATCTTTGGTCTTTTGCCTCGTAAATAAGACTAATTCCAGTCACCGTTTATATAGCGTACTGTGGACAAGAACTCTTTGGAATGAGTTTGTGAGATCCCACATCGTCTAGAGAGAGGAACGAGTGTCAGTGAGGACGTTGGGTCTTGAACGGGGTGGATTGTGAGATCCAACATCGGTTGTAAAGGGGAACAAAACATTCTTTATAAGGGTGTGGAAACCTTTCCCTAGCAGACGTGTTTTAAAATCCTTGAGGGAAAGCCCAAAAAGGAAAAGTCAAAAAAGACAATACCTGCTAGAGGTGGGATTGGGCTGTTAGAGGGTTCTACAAGAGTATCATTTGATCTTTAGCTTATATCATTTATAGAAAGGTACACTAGTTCTTAAATTATGATTTGATACGAGTCACATTCTTCTTGAATTTAAATATTGCCAATGGAGTGCCAAGAGTTTTCTACATGGTAAAGGCTCGTAACTTATCGATCAAAATTGGATAATGGGACTGTTAGTCCGACAGTGGCATGAATGCCTTTAGAAAATATTGATACATTCACTTCTTTGTGGCCACTTCAATTAAATTTGCCTAGGAGTCACTCTCAAGTTTGTTATTTTCACTTCTTTCTTTTCCAATACCTGAATTTTTATAATTGTTAAATTTGAGACTAAGAATTTAAGGCCACACTTAAACTCTACACAATTTTGTTGCAATGCTTCTGATTTGCCCCCATTGTGGGTAAAATTGAGAACTGACAAAATCTTCCAGCTCCTCGTATTACTCTCTTTGTAGGTCTTTTCTGCTTTTTACCATATCTAAGAATCCTATTGTATAATATTCGTATCATTGTTTAACTGTTACTATTTTATCACTACCAGCTGGGGGATGCAGGGTCCCAGTCCCATGTCATACCACCTGCTTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATCGCCGAGCTTGCTCAGGATCAGTGGCTTAATTGCACCCCTGATGGCTTTGTAAATTTGGGTGTCAGATCATTTCTTGATTTGCGAAGTTGGTTCCGCACTAATGACATACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGTTCTCTTCTTTTATGCCATTTTTGTGATTTACTAAGTCAATTCTCATTTTATCTCAATTTTTTGCATTGCATTATTTTCCCCTATGCCCACACTGATAGGAGAAGCTGAACATTTGATGAAAAGGATTTTATGTTGACAGTGCAATTGGTCTGGATTTCAACATGATCCAAACTCCGTATCGTTTTTACTCTAAAGAACCTTAACAAACCTTATTTCCTTGATGATTTATATGTTTGCTGGACTTGTTATTCACAGGCAGAGTTGTGTAGTAATGAAGGCTGCACTGTTCGTGTACATCGGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGGTTATATGATGTGGTACCTTCCTAATTTAATCTTTTGATCTGCAAGATCTCTTGTTCCTAACAGTTCTTTAATGGACTATTATTTAGAGTAAAAGGGCTTGCCCAAGTTGTGGCACTCAATGGCGATCTACAGCACCCAATGTGGAGTTCAAGGAGGAAGAGGATGAGCCAGATGCGCGCATTCAAGGCCAGTCATCATCACATAAGAGGAAGAAAACCAGATTAAACAGAGATATTGATTCAGGACCAAATGGAGACAGTGTGGCTGCAGCACAAGCTTCCCAACCTCCTCCAGATACAAGAAGAATAACACGAAGTACTGCACACCAGCGGTAGGCGCTTGAAATGAGGTACGGTTATTTTGATATAGTTTCATGGATCCTAGTCCAGGAGTTGTGAAGTGTGCTGCAACTGCACCTTTTGATGTATTGTGTCAAAATTATCATCATATTCATATTTAATTGAATTTGTTGTTTTCTCGTACACAGAATTGGAATGTAAAGTGCATTACACAGCGTAAGCCAAAAGTAAGTTTCTTTTTTTTTTCTTTTCTTTTCTTTCTTTTAATCTCTTGTAAACTATAGCAGTATTCTCCATTCTTGTCGTCCACACATGCAACGAGCTGTTCCATTGTAATGATTTTTTTTTCTTTTTGTACCTAGGATATTTTGATTGTATTGAGAGTATAAATAGGTTCAATATCCTTTAAATATCCCAAATTGCAGTAACAGGCTTGACCTGCTACCAAACCTACCGCTAAAAGATATTGTCATCTTTGGGTTTTCCCATTTAAGGTTCCGCTCAAGTTTTTAAAATGCGTCTGCTAGGGAGAGTTTTTCACACCCTTATAAAGAATGTTTCGTTTCCCTCTCCAACCGATGAGGGATCTAACACCTTATTTATTTATTTTATTGTGAATGAGTGTCCGAGCCAACTTGTGTCACTGTAGAATCACAAAAAACTGTTTTGACTTTACTACATTTGGTTATTACAGAAACACGTTAGATCTAAATTTTAAGTATGTGAGTACCATTGAACTTGTTAACTCAGAAATGGTTAACTGTAGCCTCTTTATTTAACAGGTATTATGCTTTTCGGTGGTGTTATGATGAACAGTTAAACATGTATGATGGGTCTGGATTGTGTAAAAAGGTATGCAGCTCAATGCTGAAAATTTGACCGTTCATCATATTTACTATGTTTAGATTTAAGGATAAATATATCCACTCTAGAGGAGTCATAATTAAGCTGTTTAAATAGTGAGAACAAATTAGAGCACTCTGGAGAAGTCATAATAGCAGTGACATGAGATAAAAGTGGCGTCTTTGAACTGTTGTGAATAGAATCGATTATGAAACTTTAGATGGTGGGAAAGTGAAGCAATGAAAAGAATATGGCTACATGTTTTGTCTTTTTTATATAATTAGATTATCTGAATTCATTACAAAAATGTCCCTTTATGAAGCTGACTTGGCTGTGAAAGGAGAGTTTGATCTAATTAGCATCTCGTGAATAACCTTCAATCATTCCAACTAAGCTGCAGTAGGTTCCTGGTCTTTAAAGGAAGAACACATGTTACTGTAACAGTCGAAGTCTACTGCTAGTCGATATTGTATTTTTTGGACTTTTTCTTTCAGGCTTCCCCTCAAGAATTTCAAAACGCGTCTGCTAGGGAGAGGTTTCCACACACTTATAAATAATGTTTCTTTGTCCTCCCAACCGATGTGGGATCTTACAATCCATTGGGTTATGCTAATTTTTATTCTTTTTAGTTCAACAATACGTTAGGTGAAGGATTTAAACCTTTACTCTCTTGGTCGATGATACATGTTTTATATCAGTTGAATTTTATTCTTATTAGTGGGCTATGCTCACTAGAGAACGACGACTAGAACGACGAAACATCTGATGGGACGTGAGTGGATGCTTTGATGTCCTAAGGGCACACATGGCCTAAGCTTCTCAGCATTGTGGTTTGTGTCATTTGTACGACCTCTGTTTTTAAGCTTTTACCTTGT

mRNA sequence

TATCCTCCCACCATGTAAAAGCGGCTATCCAGCGCTAGGCTTCACTTCCCGGAGAGTCTTTGAAAATTTTCCCGCACAAACTCTTCTCTTCTATGAGTTTGGCTGAAATTCCCTTACAGAATCAACCTTGTCTGAATCTTTGAAGTATTAGTTGACCTTGAATTAGGGTTCAGAATGCGGGAGCTGAGTTGGAGACATCACACTCTCATTCAAGCGCTTCTCGCTCGCGGCCCACTCAGAGAGGATCACTTCCATTTGCTGTTTACGCGGATCACTGAAAAGAGTCCAGATAATGACCGGCAGCTTTTTAATAATTACCTCCTGACGATGAACAAAGCACTTTCTTTTGCTCAATTTGAGTTGCGAGGCTGCAGAAACCAATATGATGGTCGTGTTTACTATGGCTTGGTCAATAATGTATCCGATGAACAATCCAAGCTAGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGTGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGGGATGCAGGGTCCCAGTCCCATGTCATACCACCTGCTTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATCGCCGAGCTTGCTCAGGATCAGTGGCTTAATTGCACCCCTGATGGCTTTGTAAATTTGGGTGTCAGATCATTTCTTGATTTGCGAAGTTGGTTCCGCACTAATGACATACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTAGTAATGAAGGCTGCACTGTTCGTGTACATCGGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCTTGCCCAAGTTGTGGCACTCAATGGCGATCTACAGCACCCAATGTGGAGTTCAAGGAGGAAGAGGATGAGCCAGATGCGCGCATTCAAGGCCAGTCATCATCACATAAGAGGAAGAAAACCAGATTAAACAGAGATATTGATTCAGGACCAAATGGAGACAGTGTGGCTGCAGCACAAGCTTCCCAACCTCCTCCAGATACAAGAAGAATAACACGAAGTACTGCACACCAGCGGTAGGCGCTTGAAATGAGAATTGGAATGTAAAGTGCATTACACAGCGTAAGCCAAAAGTATTATGCTTTTCGGTGGTGTTATGATGAACAGTTAAACATGTATGATGGGTCTGGATTGTGTAAAAAGGTATGCAGCTCAATGCTGAAAATTTGACCGTTCATCATATTTACTATGTTTAGATTTAAGGATAAATATATCCACTCTAGAGGAGTCATAATTAAGCTGTTTAAATAGTGAGAACAAATTAGAGCACTCTGGAGAAGTCATAATAGCAGTGACATGAGATAAAAGTGGCGTCTTTGAACTGTTGTGAATAGAATCGATTATGAAACTTTAGATGGTGGGAAAGTGAAGCAATGAAAAGAATATGGCTACATGTTTTGTCTTTTTTATATAATTAGATTATCTGAATTCATTACAAAAATGTCCCTTTATGAAGCTGACTTGGCTGTGAAAGGAGAGTTTGATCTAATTAGCATCTCGTGAATAACCTTCAATCATTCCAACTAAGCTGCAGTAGGTTCCTGGTCTTTAAAGGAAGAACACATGTTACTGTAACAGTCGAAGTCTACTGCTAGTCGATATTGTATTTTTTGGACTTTTTCTTTCAGGCTTCCCCTCAAGAATTTCAAAACGCGTCTGCTAGGGAGAGGTTTCCACACACTTATAAATAATGTTTCTTTGTCCTCCCAACCGATGTGGGATCTTACAATCCATTGGGTTATGCTAATTTTTATTCTTTTTAGTTCAACAATACGTTAGGTGAAGGATTTAAACCTTTACTCTCTTGGTCGATGATACATGTTTTATATCAGTTGAATTTTATTCTTATTAGTGGGCTATGCTCACTAGAGAACGACGACTAGAACGACGAAACATCTGATGGGACGTGAGTGGATGCTTTGATGTCCTAAGGGCACACATGGCCTAAGCTTCTCAGCATTGTGGTTTGTGTCATTTGTACGACCTCTGTTTTTAAGCTTTTACCTTGT

Coding sequence (CDS)

ATGCGGGAGCTGAGTTGGAGACATCACACTCTCATTCAAGCGCTTCTCGCTCGCGGCCCACTCAGAGAGGATCACTTCCATTTGCTGTTTACGCGGATCACTGAAAAGAGTCCAGATAATGACCGGCAGCTTTTTAATAATTACCTCCTGACGATGAACAAAGCACTTTCTTTTGCTCAATTTGAGTTGCGAGGCTGCAGAAACCAATATGATGGTCGTGTTTACTATGGCTTGGTCAATAATGTATCCGATGAACAATCCAAGCTAGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGTGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGGGATGCAGGGTCCCAGTCCCATGTCATACCACCTGCTTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATCGCCGAGCTTGCTCAGGATCAGTGGCTTAATTGCACCCCTGATGGCTTTGTAAATTTGGGTGTCAGATCATTTCTTGATTTGCGAAGTTGGTTCCGCACTAATGACATACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTAGTAATGAAGGCTGCACTGTTCGTGTACATCGGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCTTGCCCAAGTTGTGGCACTCAATGGCGATCTACAGCACCCAATGTGGAGTTCAAGGAGGAAGAGGATGAGCCAGATGCGCGCATTCAAGGCCAGTCATCATCACATAAGAGGAAGAAAACCAGATTAAACAGAGATATTGATTCAGGACCAAATGGAGACAGTGTGGCTGCAGCACAAGCTTCCCAACCTCCTCCAGATACAAGAAGAATAACACGAAGTACTGCACACCAGCGGTAG

Protein sequence

MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPPPDTRRITRSTAHQR
Homology
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BLAST of Cp4.1LG05g05440 vs. TrEMBL
Match: A0A0A0KZ19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G269750 PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 5.3e-145
Identity = 260/314 (82.80%), Postives = 284/314 (90.45%), Query Frame = 1 

Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           M ELSWRHHTLIQ+LL+RGPLRED FHLLF +IT K+PDND+Q+FN+YLLT+NKALSFAQ
Sbjct: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA +KAIVEAIAQD SAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           I+AL+LQLENQLGD GSQS VIP AFKNFS S KEKTIAELAQD+WL+CTPDGFVNLGVR
Sbjct: 121 ISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFR+ND+PSCEVCNEAGVKAELCS E CTVRVH+YCLKKMLSNKKSK+ACP C
Sbjct: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300
           GT+W+ST  N+E KEEEDEPD R Q Q SSHKRKK+RLN DID GPN DS   A+ASQPP
Sbjct: 241 GTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDS--TAEASQPP 300

Query: 301 PDTRRITRSTAHQR 315
           P TRR TRS+A QR
Sbjct: 301 P-TRRTTRSSARQR 311

[Close]
BLAST of Cp4.1LG05g05440 vs. TrEMBL
Match: M5WH05_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008870mg PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 7.7e-104
Identity = 197/316 (62.34%), Postives = 240/316 (75.95%), Query Frame = 1 

Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           M EL+WRH T+IQALL+RGPL+ED FH +FT +T K+P +DRQ F+++LL +NKALS+ Q
Sbjct: 1   MTELNWRHQTVIQALLSRGPLKEDQFHRIFTGLTGKTPGSDRQRFDDFLLKINKALSYVQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCR QYDG+VYYG+VNNVSDE+SKLGTKYSV QIAFYKAI+EAI QD +AQG ISN
Sbjct: 61  FELRGCRFQYDGQVYYGVVNNVSDEESKLGTKYSVAQIAFYKAIIEAIVQDGAAQGTISN 120

Query: 121 IAALHLQLENQ-LGDAGSQSH----VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFV 180
           I AL+L+LENQ L    SQSH     +PPA KNFSIS+KEKT+ EL QDQWL+ TPD ++
Sbjct: 121 IDALNLRLENQVLMGTTSQSHGGLPHVPPALKNFSISMKEKTLDELVQDQWLSVTPDNYI 180

Query: 181 NLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKR 240
            LGVRSFLDLRSWFR+ND+P+CEVCNEAGVKA LC  EGC  R+H YCLKK+ S +K +R
Sbjct: 181 GLGVRSFLDLRSWFRSNDVPACEVCNEAGVKAALCQKEGCIARIHEYCLKKLFSERKGER 240

Query: 241 ACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQ 300
            CPSCGTQW+ T    E   E+DEP+   Q Q     +KK     +I    +GD   ++Q
Sbjct: 241 VCPSCGTQWQYTVTKAE-AVEDDEPNYPTQSQPPVGPKKKRLRRNEIG---DGDISGSSQ 300

Query: 301 ASQP-PPDTRRITRST 311
           AS P  P+ RR TRS+
Sbjct: 301 ASLPGGPNLRRSTRSS 312

[Close]
BLAST of Cp4.1LG05g05440 vs. TrEMBL
Match: D7T1H8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g01590 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 6.7e-100
Identity = 192/318 (60.38%), Postives = 234/318 (73.58%), Query Frame = 1 

Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           M +LSWRHH LIQALL+RGPL ED FH +F+ +T K+P   +Q FN+YLL +NK LS+  
Sbjct: 1   MPDLSWRHHALIQALLSRGPLIEDDFHAIFSGVTGKNPGAHQQQFNDYLLKINKELSYVH 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
            ELRGCRNQYDG+VYYG+VNNVSDEQSKLGTKY+VPQ+AFYK I+EAI QD +AQG IS+
Sbjct: 61  LELRGCRNQYDGKVYYGVVNNVSDEQSKLGTKYTVPQLAFYKGIIEAIVQDVTAQGSISD 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPP----AFKNFSISLKEKTIAELAQDQWLNCTPDGFVN 180
           I AL+++LENQ+    S S  IPP    AFKNFSIS KEKT+ EL QDQWL+ TPDG + 
Sbjct: 121 IDALNIRLENQVLTGTSHSQGIPPNVPAAFKNFSISQKEKTLDELVQDQWLSSTPDGKIR 180

Query: 181 LGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRA 240
           LGVRSFLDLRSWF  ND+PSC+VCNEAGVKAELC NEGC VR+H YCLKK  S ++ +R 
Sbjct: 181 LGVRSFLDLRSWFHNNDVPSCDVCNEAGVKAELCRNEGCMVRIHLYCLKKKFSQRRVERV 240

Query: 241 CPSCGTQWRSTAPNVEFKEEEDEPDARIQGQ---SSSHKRKKTRLNRDIDSGPNGDSVAA 300
           CP CGTQW++ A   +  EEEDEP    Q Q    ++  RK+ R  +  D G NG   ++
Sbjct: 241 CPGCGTQWQN-ASITDAIEEEDEPSRPSQRQPPPPAAATRKRLRSCKTED-GENGGPSSS 300

Query: 301 AQASQPPPDTRRITRSTA 312
             +     D RRITR++A
Sbjct: 301 QTSVPVSTDFRRITRNSA 316

[Close]
BLAST of Cp4.1LG05g05440 vs. TrEMBL
Match: A0A059ABA4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00626 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 1.9e-94
Identity = 187/322 (58.07%), Postives = 227/322 (70.50%), Query Frame = 1 

Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           M EL+ RH  LIQAL++RGPL E  FH +F  +  K P + +QLFNNYLL +NK LS  Q
Sbjct: 1   MPELTDRHKVLIQALISRGPLSEKDFHAVFNGVAGKHPADHQQLFNNYLLKINKELSHVQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
            ELRGCR+Q DGRV+YG VNNV+D+QS+LGTKYSVPQIAFYK IVEAI QD +AQG IS+
Sbjct: 61  CELRGCRDQNDGRVFYGFVNNVADDQSELGTKYSVPQIAFYKCIVEAIVQDATAQGCISD 120

Query: 121 IAALHLQLENQ-LGDAGSQSH----VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFV 180
           I AL+++LENQ L  A  QS      +PPAF+NFSIS KEKT+ +L +D+WL    DG +
Sbjct: 121 IDALNIRLENQMLNGAVPQSQDNSLSVPPAFRNFSISQKEKTLEQLVRDKWLFSDSDGKI 180

Query: 181 NLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKR 240
            LG+RSFLDLRSWFR+NDIPSCEVCNEA +KAELC N+ C +R+H+YCLKK  S KK++R
Sbjct: 181 GLGLRSFLDLRSWFRSNDIPSCEVCNEAAIKAELCPNDDCNIRIHQYCLKKRFSQKKAER 240

Query: 241 ACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSH-KRKKTRLNRDIDSGPNGDSVAAA 300
            CPSCG QWR   P  E  EEED  D +IQ Q     KRKK R      +  N D++   
Sbjct: 241 VCPSCGQQWRCVLPKAEEIEEEDAQDVQIQSQPVPRPKRKKLRSG----AATNADTLLPT 300

Query: 301 QASQPP--PDTRRITRSTAHQR 315
            +   P  PD RR TRS+A  R
Sbjct: 301 SSQDAPNGPDFRRTTRSSARLR 318

[Close]
BLAST of Cp4.1LG05g05440 vs. TrEMBL
Match: A0A067L363_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23843 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 2.1e-93
Identity = 179/320 (55.94%), Postives = 229/320 (71.56%), Query Frame = 1 

Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           M  L+W+HHTLIQ L+ RGPL+E+ F  +FT +T K P +  + FN++LL +NK LS+ Q
Sbjct: 1   MAVLNWKHHTLIQVLMTRGPLKENEFQKIFTGVTGKHPRSCERDFNDFLLKINKELSYVQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
            ELR CRNQ DG V YGLVNNVSDEQSKLGTKYSVPQIA YK ++EAI QD +AQG IS 
Sbjct: 61  MELRLCRNQNDGEVCYGLVNNVSDEQSKLGTKYSVPQIALYKGVIEAIVQDATAQGSIST 120

Query: 121 IAALHLQLENQL-GDAGSQSH----VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFV 180
           I AL+++LE+Q+ G  GSQS      +PPA +NFS+S KEKT+ EL +D+WL  TPDG +
Sbjct: 121 IDALNIRLESQVHGGTGSQSQGGLSQVPPALRNFSMSQKEKTLDELVRDKWLCHTPDGHI 180

Query: 181 NLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKR 240
            LGVRS+LDLRS F  + IPSCEVCNEA +KA++C NEGC +R+H YCLKK LS ++ K 
Sbjct: 181 GLGVRSYLDLRSLFHNSGIPSCEVCNEAAIKAKVCQNEGCALRIHHYCLKKKLSQRRGKI 240

Query: 241 ACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQ-SSSHKRKKTRLNRDIDSGPNGDSVAAA 300
            CP+CG QW    P  E  E EDEP+ +I+   S+  KRK+ + NR+ D+   G    ++
Sbjct: 241 VCPTCGIQWDCEVPECEAVEGEDEPNEQIESHPSAGSKRKRHKANRNTDADTVG--CTSS 300

Query: 301 QASQPPPDTRRITRSTAHQR 315
           QASQ   D RR+TRS+A  R
Sbjct: 301 QASQSVSDLRRVTRSSARTR 318

[Close]
BLAST of Cp4.1LG05g05440 vs. TAIR10
Match: AT5G21140.1 (AT5G21140.1 embryo defective 1379)

HSP 1 Score: 343.2 bits (879), Expect = 1.7e-94
Identity = 175/316 (55.38%), Postives = 228/316 (72.15%), Query Frame = 1 

Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           M  LSW+HHTLIQAL++RGPL+E  FH +FT +T ++P   +++F+ YLL +NK LS+  
Sbjct: 1   MASLSWKHHTLIQALISRGPLKEKEFHSIFTAVTGRNPVTVKKIFDKYLLEINKELSYVH 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FEL+ CR+QYDG+V YG+VNNV+D+QSKLGTKYSVPQIAF+K I+EAIAQD +AQG IS+
Sbjct: 61  FELKACRDQYDGQVCYGVVNNVADDQSKLGTKYSVPQIAFFKGIIEAIAQDEAAQGCISS 120

Query: 121 IAALHLQLENQL-GDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180
             AL+++LENQ+  +A S    +PPAFKNFS++ KEKT+ EL +D+WL  T +  + LG+
Sbjct: 121 FDALNIRLENQISSEASSSQQQVPPAFKNFSMTQKEKTLDELVRDKWLCRTRERNIGLGI 180

Query: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPS 240
           RS LDLRSWFR ND+PSCEVCNEAGVKA+LC  EGC VR+H+YCLKK+LS +  KR C  
Sbjct: 181 RSLLDLRSWFRNNDVPSCEVCNEAGVKADLCPTEGCPVRIHKYCLKKLLSQRDDKR-CSG 240

Query: 241 CGTQW-RSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQ 300
           CG  W  S     E  EE    +   + Q+++ K K+ R  R  DS  NG S  A+ AS 
Sbjct: 241 CGKPWPLSKITKTEAAEEAMNDEEESETQATAPKAKRRRQQR--DSTENGSS-QASLAST 300

Query: 301 PPPDTRRITRSTAHQR 315
              +TRR+TRS  H R
Sbjct: 301 SGANTRRVTRSVGHSR 312

[Close]
BLAST of Cp4.1LG05g05440 vs. NCBI nr
Match: gi|659097871|ref|XP_008449859.1| (PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Cucumis melo])

HSP 1 Score: 529.6 bits (1363), Expect = 3.6e-147
Identity = 260/314 (82.80%), Postives = 285/314 (90.76%), Query Frame = 1 

Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           M ELSWRHHTLIQ+LL+RGPLRED FHLLF RIT K+PDND+Q+FN+YLLT+NKALSFAQ
Sbjct: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIAF+KAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           I+AL+LQLENQLGD G QS VIP AFKNFS S KEKTIAELAQD+WL+CTP+GFVNLGVR
Sbjct: 121 ISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFR+ND+PSCEVCNEAGVKAELCS+E CTVRVHRYCLKKMLSNKKSKRACP C
Sbjct: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300
           GT+W+ST  N+E KEE DEPD R Q Q SSHKRKK++LN DID GPN DS   A+ASQPP
Sbjct: 241 GTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDST--AEASQPP 300

Query: 301 PDTRRITRSTAHQR 315
           PDTRR TR++  QR
Sbjct: 301 PDTRRATRNSTRQR 312

[Close]
BLAST of Cp4.1LG05g05440 vs. NCBI nr
Match: gi|778692853|ref|XP_004149665.2| (PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Cucumis sativus])

HSP 1 Score: 521.9 bits (1343), Expect = 7.6e-145
Identity = 260/314 (82.80%), Postives = 284/314 (90.45%), Query Frame = 1 

Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           M ELSWRHHTLIQ+LL+RGPLRED FHLLF +IT K+PDND+Q+FN+YLLT+NKALSFAQ
Sbjct: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA +KAIVEAIAQD SAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           I+AL+LQLENQLGD GSQS VIP AFKNFS S KEKTIAELAQD+WL+CTPDGFVNLGVR
Sbjct: 121 ISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFR+ND+PSCEVCNEAGVKAELCS E CTVRVH+YCLKKMLSNKKSK+ACP C
Sbjct: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300
           GT+W+ST  N+E KEEEDEPD R Q Q SSHKRKK+RLN DID GPN DS   A+ASQPP
Sbjct: 241 GTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDS--TAEASQPP 300

Query: 301 PDTRRITRSTAHQR 315
           P TRR TRS+A QR
Sbjct: 301 P-TRRTTRSSARQR 311

[Close]
BLAST of Cp4.1LG05g05440 vs. NCBI nr
Match: gi|595836842|ref|XP_007207339.1| (hypothetical protein PRUPE_ppa008870mg [Prunus persica])

HSP 1 Score: 385.2 bits (988), Expect = 1.1e-103
Identity = 197/316 (62.34%), Postives = 240/316 (75.95%), Query Frame = 1 

Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           M EL+WRH T+IQALL+RGPL+ED FH +FT +T K+P +DRQ F+++LL +NKALS+ Q
Sbjct: 1   MTELNWRHQTVIQALLSRGPLKEDQFHRIFTGLTGKTPGSDRQRFDDFLLKINKALSYVQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCR QYDG+VYYG+VNNVSDE+SKLGTKYSV QIAFYKAI+EAI QD +AQG ISN
Sbjct: 61  FELRGCRFQYDGQVYYGVVNNVSDEESKLGTKYSVAQIAFYKAIIEAIVQDGAAQGTISN 120

Query: 121 IAALHLQLENQ-LGDAGSQSH----VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFV 180
           I AL+L+LENQ L    SQSH     +PPA KNFSIS+KEKT+ EL QDQWL+ TPD ++
Sbjct: 121 IDALNLRLENQVLMGTTSQSHGGLPHVPPALKNFSISMKEKTLDELVQDQWLSVTPDNYI 180

Query: 181 NLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKR 240
            LGVRSFLDLRSWFR+ND+P+CEVCNEAGVKA LC  EGC  R+H YCLKK+ S +K +R
Sbjct: 181 GLGVRSFLDLRSWFRSNDVPACEVCNEAGVKAALCQKEGCIARIHEYCLKKLFSERKGER 240

Query: 241 ACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQ 300
            CPSCGTQW+ T    E   E+DEP+   Q Q     +KK     +I    +GD   ++Q
Sbjct: 241 VCPSCGTQWQYTVTKAE-AVEDDEPNYPTQSQPPVGPKKKRLRRNEIG---DGDISGSSQ 300

Query: 301 ASQP-PPDTRRITRST 311
           AS P  P+ RR TRS+
Sbjct: 301 ASLPGGPNLRRSTRSS 312

[Close]
BLAST of Cp4.1LG05g05440 vs. NCBI nr
Match: gi|1009113846|ref|XP_015873366.1| (PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Ziziphus jujuba])

HSP 1 Score: 377.5 bits (968), Expect = 2.3e-101
Identity = 195/319 (61.13%), Postives = 236/319 (73.98%), Query Frame = 1 

Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           M EL+WRH TLIQALL+RGPL+ED FH +FT +T K+P + +QLF+++LL +NK LS+ Q
Sbjct: 1   MPELTWRHQTLIQALLSRGPLKEDQFHRIFTGLTGKNPGSHQQLFDDFLLKINKELSYVQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCR+QYDG+VYYG+VNNVSDEQSKLGTKYSV QIAFYKAI+EAI QD +AQG IS+
Sbjct: 61  FELRGCRSQYDGQVYYGVVNNVSDEQSKLGTKYSVSQIAFYKAIIEAIVQDATAQGSISS 120

Query: 121 IAALHLQLENQL----GDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVN 180
           I AL+L+LENQ+    G  G+  ++  PA +NFSIS KEK + EL  DQWLN   DG + 
Sbjct: 121 IDALNLRLENQVIIGTGSQGNGDYI--PALRNFSISQKEKALNELVLDQWLNVV-DGNIV 180

Query: 181 LGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRA 240
           LG+RSFLDLRSWFR NDIPSCEVCNEAGVKAELC NE C VR+H YCLKK+ S +K  R 
Sbjct: 181 LGIRSFLDLRSWFRNNDIPSCEVCNEAGVKAELCQNEACVVRIHNYCLKKLFSQRKGGRV 240

Query: 241 CPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKR-KKTRLNRDIDSGPNGDSVAAAQ 300
           CPSCGTQW+   P +E  E +DEP+   Q Q     R K+ R N + +SGP       +Q
Sbjct: 241 CPSCGTQWK-YGPKLELVEHDDEPNMPTQSQPPPRPRIKRQRTNNETESGP-------SQ 300

Query: 301 ASQPPPDTRRITRSTAHQR 315
            SQP  D RR TRS+   R
Sbjct: 301 HSQPSSDMRRATRSSNRAR 308

[Close]
BLAST of Cp4.1LG05g05440 vs. NCBI nr
Match: gi|296083970|emb|CBI24358.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 372.1 bits (954), Expect = 9.7e-100
Identity = 192/318 (60.38%), Postives = 234/318 (73.58%), Query Frame = 1 

Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           M +LSWRHH LIQALL+RGPL ED FH +F+ +T K+P   +Q FN+YLL +NK LS+  
Sbjct: 1   MPDLSWRHHALIQALLSRGPLIEDDFHAIFSGVTGKNPGAHQQQFNDYLLKINKELSYVH 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
            ELRGCRNQYDG+VYYG+VNNVSDEQSKLGTKY+VPQ+AFYK I+EAI QD +AQG IS+
Sbjct: 61  LELRGCRNQYDGKVYYGVVNNVSDEQSKLGTKYTVPQLAFYKGIIEAIVQDVTAQGSISD 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPP----AFKNFSISLKEKTIAELAQDQWLNCTPDGFVN 180
           I AL+++LENQ+    S S  IPP    AFKNFSIS KEKT+ EL QDQWL+ TPDG + 
Sbjct: 121 IDALNIRLENQVLTGTSHSQGIPPNVPAAFKNFSISQKEKTLDELVQDQWLSSTPDGKIR 180

Query: 181 LGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRA 240
           LGVRSFLDLRSWF  ND+PSC+VCNEAGVKAELC NEGC VR+H YCLKK  S ++ +R 
Sbjct: 181 LGVRSFLDLRSWFHNNDVPSCDVCNEAGVKAELCRNEGCMVRIHLYCLKKKFSQRRVERV 240

Query: 241 CPSCGTQWRSTAPNVEFKEEEDEPDARIQGQ---SSSHKRKKTRLNRDIDSGPNGDSVAA 300
           CP CGTQW++ A   +  EEEDEP    Q Q    ++  RK+ R  +  D G NG   ++
Sbjct: 241 CPGCGTQWQN-ASITDAIEEEDEPSRPSQRQPPPPAAATRKRLRSCKTED-GENGGPSSS 300

Query: 301 AQASQPPPDTRRITRSTA 312
             +     D RRITR++A
Sbjct: 301 QTSVPVSTDFRRITRNSA 316

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g05440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG05g05440 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZ19_CUCSA5.3e-14582.80Uncharacterized protein OS=Cucumis sativus GN=Csa_4G269750 PE=4 SV=1[more]
M5WH05_PRUPE7.7e-10462.34Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008870mg PE=4 SV=1[more]
D7T1H8_VITVI6.7e-10060.38Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g01590 PE=4 SV=... [more]
A0A059ABA4_EUCGR1.9e-9458.07Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00626 PE=4 SV=1[more]
A0A067L363_JATCU2.1e-9355.94Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23843 PE=4 SV=1[more]
BLAST of Cp4.1LG05g05440 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G21140.11.7e-9455.38 embryo defective 1379[more]
BLAST of Cp4.1LG05g05440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659097871|ref|XP_008449859.1|3.6e-14782.80PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Cucumis ... [more]
gi|778692853|ref|XP_004149665.2|7.6e-14582.80PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Cucumis ... [more]
gi|595836842|ref|XP_007207339.1|1.1e-10362.34hypothetical protein PRUPE_ppa008870mg [Prunus persica][more]
gi|1009113846|ref|XP_015873366.1|2.3e-10161.13PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Ziziphus... [more]
gi|296083970|emb|CBI24358.3|9.7e-10060.38unnamed protein product [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0030915Smc5-Smc6 complex
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: INTERPRO
TermDefinition
IPR014857Znf_RING-like
IPR013083Znf_RING/FYVE/PHD
IPR011513Nse1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
biological_process GO:0000724 double-strand break repair via homologous recombination
biological_process GO:0006301 postreplication repair
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0030915 Smc5-Smc6 complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0004842 ubiquitin-protein transferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g05440.1Cp4.1LG05g05440.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011513Non-structural maintenance of chromosomes element 1PFAMPF07574SMC_Nse1coord: 8..185
score: 3.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 193..251
score: 1.
IPR014857Zinc finger, RING-likePFAMPF08746zf-RING-likecoord: 197..240
score: 2.
NoneNo IPR availablePANTHERPTHR20973NON-SMC ELEMENT 1-RELATEDcoord: 1..307
score: 6.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG05g05440Cucsa.152960Cucumber (Gy14) v1cgycpeB0410
Cp4.1LG05g05440CmaCh02G011890Cucurbita maxima (Rimu)cmacpeB646
Cp4.1LG05g05440CmoCh02G012210Cucurbita moschata (Rifu)cmocpeB595
Cp4.1LG05g05440Cla003146Watermelon (97103) v1cpewmB723
Cp4.1LG05g05440Csa4G269750Cucumber (Chinese Long) v2cpecuB728
Cp4.1LG05g05440MELO3C014703Melon (DHL92) v3.5.1cpemeB696
Cp4.1LG05g05440ClCG02G024200Watermelon (Charleston Gray)cpewcgB644
Cp4.1LG05g05440CSPI04G12760Wild cucumber (PI 183967)cpecpiB730
Cp4.1LG05g05440Lsi10G009400Bottle gourd (USVL1VR-Ls)cpelsiB598
Cp4.1LG05g05440MELO3C014703.2Melon (DHL92) v3.6.1cpemedB829
Cp4.1LG05g05440CsaV3_4G017330Cucumber (Chinese Long) v3cpecucB0906
Cp4.1LG05g05440Bhi10G000372Wax gourdcpewgoB0944
Cp4.1LG05g05440CsGy4G011510Cucumber (Gy14) v2cgybcpeB559
Cp4.1LG05g05440Carg02769Silver-seed gourdcarcpeB1283
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g05440Cucurbita pepo (Zucchini)cpecpeB310
Cp4.1LG05g05440Cucurbita pepo (Zucchini)cpecpeB369
Cp4.1LG05g05440Cucumber (Gy14) v1cgycpeB0386
Cp4.1LG05g05440Cucurbita maxima (Rimu)cmacpeB098
Cp4.1LG05g05440Cucurbita maxima (Rimu)cmacpeB586
Cp4.1LG05g05440Cucurbita moschata (Rifu)cmocpeB074
Cp4.1LG05g05440Cucurbita moschata (Rifu)cmocpeB535
Cp4.1LG05g05440Wild cucumber (PI 183967)cpecpiB705
Cp4.1LG05g05440Cucumber (Chinese Long) v2cpecuB703
Cp4.1LG05g05440Cucumber (Gy14) v2cgybcpeB137
Cp4.1LG05g05440Cucumber (Gy14) v2cgybcpeB561
Cp4.1LG05g05440Silver-seed gourdcarcpeB0658
Cp4.1LG05g05440Silver-seed gourdcarcpeB0741
Cp4.1LG05g05440Cucumber (Chinese Long) v3cpecucB0877
Cp4.1LG05g05440Cucumber (Chinese Long) v3cpecucB0908