Carg02769 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg02769
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	non-structural maintenance of chromosomes element 1 homolog
Location	Cucurbita_argyrosperma_scaffold_009 : 1752085 .. 1756763 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCACTTCCTGGAGGTCTTTCAAAATTTTCCCGCACAATTTCTTCTCTTCTATGAGTTTGGCTGAAACTCCCTTACAGAATCAACCTTGTCTGAATCTTTGAGGTATTAGCTGACCTTGAATTAGGGTTCAGAATGCGGGAGCTGAGTTGGAGACATCACACTCTCATTCAAGCGCTTCTCGCTCGCGGCCCACTCAGAGAGGATCACTTCCATTTGCTGTTTACGCGGATCACTGAAAAGAGTCCAGGTTTTAATTTCTTTCTCCTTCCCCAGTTTGGTATTCAAGTTGGGAAGTAATGATTTAACGGTATGGAGTCCTGCTCGTTTTTGTCTAACAAATGATGGAGGATGTCTTTCTTAGATCATTTGTAAAAGATGCGTTTGAGTTCTTATAAATTCATGTTCAAAGATTACCGAATATTTGCAATAGAATGGTTTCTGAGTATAATATGGAACCACATATTGGAAGAAATTGCATCAGGGTTCATATCCGTATACGTTTTGGAAATGTGTATTCTTATATCTTTCCTTAATCATTAGCATAAACGATTGAAAAGGAAGAGTGTTTTTAATTGATAATTTGGCCGACGGTTGGAAACTAAGATCTGTTCGATGTTTATTTTGGTGCAGATAATGACCGGCAGCTTTTTAATAATTACCTCCTGACGATGAACAAAGCACTTTCTTTTGCTCAATTTGAGTTGCGAGGCTGCAGAAACCAATATGATGGTCGTGTTTACTATGGCTTGGTCAATAATGTATCCGATGAACAATCCAAACTGGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTGAGTTATCAACTATGGGAACTATTGGCGTTCTTCAATAAACTGACCATTCTGCCAATTTGCTTAACAATAAACTATGGATACTTAGTGTTTACAATATATGCATCTTTTGTTTTATTGTCGTAGTATTTCTTATAAACAAAAAATTGCGATGTCAGGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGTGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGGTTCCTCTTGTTTGTATATGACCAATACTACCGTTTTGAGTTTATTATTGTCAAAGTCAGCTGCATATTTAACTAAGGTTGGCATCTTTGGTCTTTTGCCTTGTAAATAAGACTAATTCCAGTCACCATTTATATAGCGTACTGTGGACAAAGAACTTTTTGGAATGAATTTGTGAGATCCCACATCGTTTAGAGAGAGTAACGAGTGCCAGTGAGGATGTTGGGTCCCGAACGGGGTGGATTGTGAGATCCAACATCGGTTGAAGAGGGGAACGAAACATTATTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCTTTTTAAAAACCTTGAGGGAAAGCCGAAAAAGGAAAAGCCAAAGAAGACAATATCTAATAGAGGTGGGCTTGGGCTGGTATAGAGTTCTACAAGAGTATCATTTGATCTTTAGCTTATATCATTTATAGAAAGGTACACTAGTTCTTAAATTATGATTTGATACGAGTCACATTCTTCTTGAATTTAAATACTGCCAATGGAGTGCCAAGAGTTTTCTACATGGTAAAGGCTCGTAACTTACCGACCAAAATTGGATAATGGGACTGTTAGTCCGACAGTGGCATGAATGCCTTTAGAATATATATTGATACATTCACTTCTTTGTGGCCACTTCAATTAAATTCGTCTAGGAGACACTCTCAAGTTTGTTATTTTCCAATACCTGAATTTTTATAATTGTTAAATTTGAGACTAAGAATTTAAGGCCACACTTAAACTCTACACAATTTTGTTGCATTGCTTCTGATTTGCCCCCATTGTGGGTAAAATTGAGAACTGACAAAAGCTTCCAGCTCCTTGTATTACTCTCTTTGTAGGTCTTTTCTGCTTTTTCCCATATCTAAGAATCCTATTGTATAATATTCGTATCATTGTTTAACTGTTACTGTTTTATCACTACCAGCTGGGGGATGCAGGGTCCCAGTCCCATGTCATACCACCTGCTTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATCGCGGAGCTTGCTCAGGATCAGTGGCTTAATTGCACCCCTGATGGTTTTGTAAATTTGGGTGTCAGATCATTTCTTGATTTGCGAAGTTGGTTCCGCACTAATGACATACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGTTCTCTTCTTTTATGCCATTTTTGTGATTTACAAAGTCAATTATCATTTTATTTCAATTTTGTGCATTGCATTATTTTCCCCTATGCCCACACTGATAGGAGAAGCTGAACATTTGATGAAAAGGATTTTATGTTGACAGTGCAATTGGTCTGGATTTCAACATGATCCAAACACCGTATCGTTTTTACTCTAAAGAACCTTAACAAACCTTATTTCCTTGATGATTTATATGTTTGCTGGACTTGTTATTCACAGGCAGAGTTGTGTAGTAATGAAGGCTGCACTGTTCGTGTACATCCGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGGTTATATGATGTGGTACCTTCCTAATTTAATCTTTTGATCTGCAAGATCTCTTTTTCTTAACAGTTCTTTAATGGACTATTATTTAGAGTAAAAGGGCTTGCCCAAGTTGTGGCACTCAATGGCGATCTACAGCACCCAATGTGGAGTTCAAGGAGGAAGAGGATGAGCCAGATGCGCGCATTCAAGGCCAGTCATCATCACATAAGAGGAAGAAAACCAGATTGAACAGAGATATTGATTCAGGACCAAATGGAGACAGTATGGCTGCGGCACAAGCTTCCCAACCTCCTCCAGATACAAGGAGAATAACACGAAGTTCTGCACACCCGCGGTAGGCGCTTGAAATGAGGTACGGTTATTTTGATATAGTTTCATGGATCCTAGTCTAGGAGTTGTGAAGTGTGCAGCAACTGCACCTTTTGATGTATTGTGTCAAAATTATCATCATATTCATCTTTAATTGAATTTGTTGTTTTCTCGTACACAGAATTGGAATGTAAAGTGCATTACACAGCGTAAGCCAAAAGTAAGTTTCCTTTTCTTTCTTTTAGTCTCTTGTAAACTATAGCAGTGTTCTCCATTCTTGTCGTCCACACATGCAAGGAACGAGCTGTTCCGTTGTAATGATTTTTTTTTCTTTTTGTACCAAGGATATTTTGCTTGTATTGAGAGTATAAATAGGTTCAATATTCTATAAATATCCCAAATTGCAATCCTTATGTAACAGTAACAGCCCAAGCCTGCTACCAAGTCTACAGGTAGCAGATATTGTCTATTTTGGGTTTTTCCTTTCAAGGTTCCCCTTAAAACGCACTTGCAAGGGAGAGATTTCCACACCCTTATAAAGAATGTTTTGTTTCCCTCTCCAACCGATGTAGGTTCTAATACTTTTTTTTTTCTTTTTATTGTGAGTGAGTGTCCGAGCCAACTTGTGTCACCATAGAAACACAAAAAACTATTTGACCTTGCTAATTTGATTATTGTAGAAACATGTTTGATCTAAATTCTAAGTATATGAGCACCATAGATTGAACTTGTTCTCTCTTATTTCTCCGAGACTCTTTTGGCCACCAAATTAACTCATAATAGTTAACTGTAGCCTCTTTATTTAACAGGAATTATGCTCTGTGGTGTGATGATGAACAGTTAAACATGTATGATGGGTCTGGATTGTGTAAAAAGGTATGCAGCTCAATGCTGAAAATTTGACCGTTCATCATATTTTCTATGTTTAGATTTAAGGATAAATATATCCACTCTAGAGGAGTCATAATTAAGCTGTTTAAATAGTGAACAAATTAGAGCACTCTGGAGAAGTCATAATAGCAGTGACATGAGATAAAAGTGGCGTCTTTGAACTGTTGAGAATAGAATCGATTATGAAACTTTAGATGGTGGGAAAGTGAAGCAATGAAAAGAATATGGCTACATGTTTGTCTTTTTATATAATTAGATTATCTGAATTCATTACAAAAATGTCCCTTTATGAAGCTGACTTGGCTGTGAAAAGAGAGTTTGATCTAATTAGCATCTTGTGAATGACGTTCAATCATCCAACTAAGCTACAGTAGGTGTGTCTAAGTTCACTACTAGTCGATATTGTCTCTTTTGGACTTTTCCTTTTAGGCTTCTTCTCAAAATTTTTAAAACGCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATATTTCTTTGTCCTCTCAACCGACATGGGATCTCACAATCTATTGAGATATGCTAACTTTTATTCTTTTTAGTTCAACAATACATCAAGTGAATTATTTAAACCTTTACTCTCTTGGTTCATGATACATGTTTTATATCAGTTGAATTTTGTTCTTATTAGTGGGCTATGCTCACTAGAGAACGACGAAACATCTGATGGGACGTGAGTGGATGCTTTGATGTCCTAAGGGCACACATGGCCTAAGCTTCTCAGCATTGTGGTTTGTGTCATTTGTACGACCTCTGTTTTTAAGCCTTTGCCTTGTTTAAACAAGAACAGAATCCAAAGTAAAGTCTCAATTCAAAAGGTATAACCATTTTGCCATTTATTATCTGTTCTATTATTATAAAGTATGAGTAAATATTCGTCCTTCTTCTG

mRNA sequence

CTTCACTTCCTGGAGGTCTTTCAAAATTTTCCCGCACAATTTCTTCTCTTCTATGAGTTTGGCTGAAACTCCCTTACAGAATCAACCTTGTCTGAATCTTTGAGGTATTAGCTGACCTTGAATTAGGGTTCAGAATGCGGGAGCTGAGTTGGAGACATCACACTCTCATTCAAGCGCTTCTCGCTCGCGGCCCACTCAGAGAGGATCACTTCCATTTGCTGTTTACGCGGATCACTGAAAAGAGTCCAGATAATGACCGGCAGCTTTTTAATAATTACCTCCTGACGATGAACAAAGCACTTTCTTTTGCTCAATTTGAGTTGCGAGGCTGCAGAAACCAATATGATGGTCGTGTTTACTATGGCTTGGTCAATAATGTATCCGATGAACAATCCAAACTGGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGTGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGGGATGCAGGGTCCCAGTCCCATGTCATACCACCTGCTTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATCGCGGAGCTTGCTCAGGATCAGTGGCTTAATTGCACCCCTGATGGTTTTGTAAATTTGGGTGTCAGATCATTTCTTGATTTGCGAAGTTGGTTCCGCACTAATGACATACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTAGTAATGAAGGCTGCACTGTTCGTGTACATCCGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCTTGCCCAAGTTGTGGCACTCAATGGCGATCTACAGCACCCAATGTGGAGTTCAAGGAGGAAGAGGATGAGCCAGATGCGCGCATTCAAGGCCAGTCATCATCACATAAGAGGAAGAAAACCAGATTGAACAGAGATATTGATTCAGGACCAAATGGAGACAGTATGGCTGCGGCACAAGCTTCCCAACCTCCTCCAGATACAAGGAGAATAACACGAAGTTCTGCACACCCGCGGAATTATGCTCTGTGGTGTGATGATGAACAGTTAAACATGTATGATGGGTCTGGATTGTGTAAAAAGTTGAATTTTGTTCTTATTAGTGGGCTATGCTCACTAGAGAACGACGAAACATCTGATGGGACGTGAGTGGATGCTTTGATGTCCTAAGGGCACACATGGCCTAAGCTTCTCAGCATTGTGGTTTGTGTCATTTGTACGACCTCTGTTTTTAAGCCTTTGCCTTGTTTAAACAAGAACAGAATCCAAAGTAAAGTCTCAATTCAAAAGGTATAACCATTTTGCCATTTATTATCTGTTCTATTATTATAAAGTATGAGTAAATATTCGTCCTTCTTCTG

Coding sequence (CDS)

ATGCGGGAGCTGAGTTGGAGACATCACACTCTCATTCAAGCGCTTCTCGCTCGCGGCCCACTCAGAGAGGATCACTTCCATTTGCTGTTTACGCGGATCACTGAAAAGAGTCCAGATAATGACCGGCAGCTTTTTAATAATTACCTCCTGACGATGAACAAAGCACTTTCTTTTGCTCAATTTGAGTTGCGAGGCTGCAGAAACCAATATGATGGTCGTGTTTACTATGGCTTGGTCAATAATGTATCCGATGAACAATCCAAACTGGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGTGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGGGATGCAGGGTCCCAGTCCCATGTCATACCACCTGCTTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATCGCGGAGCTTGCTCAGGATCAGTGGCTTAATTGCACCCCTGATGGTTTTGTAAATTTGGGTGTCAGATCATTTCTTGATTTGCGAAGTTGGTTCCGCACTAATGACATACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTAGTAATGAAGGCTGCACTGTTCGTGTACATCCGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCTTGCCCAAGTTGTGGCACTCAATGGCGATCTACAGCACCCAATGTGGAGTTCAAGGAGGAAGAGGATGAGCCAGATGCGCGCATTCAAGGCCAGTCATCATCACATAAGAGGAAGAAAACCAGATTGAACAGAGATATTGATTCAGGACCAAATGGAGACAGTATGGCTGCGGCACAAGCTTCCCAACCTCCTCCAGATACAAGGAGAATAACACGAAGTTCTGCACACCCGCGGAATTATGCTCTGTGGTGTGATGATGAACAGTTAAACATGTATGATGGGTCTGGATTGTGTAAAAAGTTGAATTTTGTTCTTATTAGTGGGCTATGCTCACTAGAGAACGACGAAACATCTGATGGGACGTGA

Protein sequence

MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPPPDTRRITRSSAHPRNYALWCDDEQLNMYDGSGLCKKLNFVLISGLCSLENDETSDGT

Homology

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BLAST of Carg02769 vs. NCBI nr
Match: XP_022957637.1 (non-structural maintenance of chromosomes element 1 homolog [Cucurbita moschata])

HSP 1 Score: 635.6 bits (1638), Expect = 1.0e-178
Identity = 311/314 (99.04%), Postives = 313/314 (99.68%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSP+NDRQLFNNYLLTMNKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSA+GGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSARGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVH YCLKKMLSNKKSKRACPSC
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300
           GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300

Query: 301 PDTRRITRSSAHPR 315
           PDTRRITRSSAHPR
Sbjct: 301 PDTRRITRSSAHPR 314

[Close]

BLAST of Carg02769 vs. NCBI nr
Match: XP_022995424.1 (non-structural maintenance of chromosomes element 1 homolog isoform X2 [Cucurbita maxima])

HSP 1 Score: 634.0 bits (1634), Expect = 3.0e-178
Identity = 311/314 (99.04%), Postives = 312/314 (99.36%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVH YCLKKMLSNKKSKRACPSC
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300
           GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300

Query: 301 PDTRRITRSSAHPR 315
           PDTRRITRSSAH R
Sbjct: 301 PDTRRITRSSAHQR 314

[Close]

BLAST of Carg02769 vs. NCBI nr
Match: XP_022995422.1 (non-structural maintenance of chromosomes element 1 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 634.0 bits (1634), Expect = 3.0e-178
Identity = 311/314 (99.04%), Postives = 312/314 (99.36%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVH YCLKKMLSNKKSKRACPSC
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300
           GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300

Query: 301 PDTRRITRSSAHPR 315
           PDTRRITRSSAH R
Sbjct: 301 PDTRRITRSSAHQR 314

[Close]

BLAST of Carg02769 vs. NCBI nr
Match: XP_023533198.1 (non-structural maintenance of chromosomes element 1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 632.9 bits (1631), Expect = 6.7e-178
Identity = 310/314 (98.73%), Postives = 312/314 (99.36%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVH YCLKKMLSNKKSKRACPSC
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300
           GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300

Query: 301 PDTRRITRSSAHPR 315
           PDTRRITRS+AH R
Sbjct: 301 PDTRRITRSTAHQR 314

[Close]

BLAST of Carg02769 vs. NCBI nr
Match: XP_008449859.1 (PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Cucumis melo])

HSP 1 Score: 490.7 bits (1262), Expect = 4.1e-135
Identity = 244/314 (77.71%), Postives = 266/314 (84.71%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           M ELSWRHHTLIQ+LL+RGPLRED FHLLF RIT K+PDND+Q+FN+YLLT+NKALSFAQ
Sbjct: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIAF+KAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           I+AL+LQLENQLGD G QS VIP AFKNFS S KEKTIAELAQD+WL+CTP+GFVNLGVR
Sbjct: 121 ISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFR+ND+PSCEVCNEAGVKAELCS+E CTVRVH YCLKKMLSNKKSKRACP C
Sbjct: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300
           GT+W+ST  N+E KEE DEPD R                      PN DS   A+ASQPP
Sbjct: 241 GTRWQSTMSNIESKEEVDEPDTRTXXXXXXXXXXXXXXXXXXXXXPNEDS--TAEASQPP 300

Query: 301 PDTRRITRSSAHPR 315
           PDTRR TR+S   R
Sbjct: 301 PDTRRATRNSTRQR 312

[Close]

BLAST of Carg02769 vs. TAIR10
Match: AT5G21140.1 (embryo defective 1379)

HSP 1 Score: 325.1 bits (832), Expect = 5.4e-89
Identity = 150/245 (61.22%), Postives = 193/245 (78.78%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           M  LSW+HHTLIQAL++RGPL+E  FH +FT +T ++P   +++F+ YLL +NK LS+  
Sbjct: 1   MASLSWKHHTLIQALISRGPLKEKEFHSIFTAVTGRNPVTVKKIFDKYLLEINKELSYVH 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FEL+ CR+QYDG+V YG+VNNV+D+QSKLGTKYSVPQIAF+K I+EAIAQD +AQG IS+
Sbjct: 61  FELKACRDQYDGQVCYGVVNNVADDQSKLGTKYSVPQIAFFKGIIEAIAQDEAAQGCISS 120

Query: 121 IAALHLQLENQL-GDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180
             AL+++LENQ+  +A S    +PPAFKNFS++ KEKT+ EL +D+WL  T +  + LG+
Sbjct: 121 FDALNIRLENQISSEASSSQQQVPPAFKNFSMTQKEKTLDELVRDKWLCRTRERNIGLGI 180

Query: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPS 240
           RS LDLRSWFR ND+PSCEVCNEAGVKA+LC  EGC VR+H YCLKK+LS +  KR C  
Sbjct: 181 RSLLDLRSWFRNNDVPSCEVCNEAGVKADLCPTEGCPVRIHKYCLKKLLSQRDDKR-CSG 240

Query: 241 CGTQW 245
           CG  W
Sbjct: 241 CGKPW 244

[Close]

BLAST of Carg02769 vs. Swiss-Prot
Match: sp|Q6PAF4|NSE1_XENLA (Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus laevis OX=8355 GN=nsmce1 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.2e-10
Identity = 62/282 (21.99%), Postives = 117/282 (41.49%), Query Frame = 0


Query: 8   HHTLIQALLARGPLREDHFHLLFTRITE-KSPDNDRQLFNNYLLTMNKALSFAQFELRGC 67
           H   +QAL++ G +       L     E           ++++  +N+ L      +   
Sbjct: 9   HQRFLQALMSHGIMEGSAVRALHRHCCELHKVHYMHDKLDDFVGVLNRHLQPLFMTIEKG 68

Query: 68  RNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHL 127
             + DG  YY LVN V ++ +K+ + Y+  ++  ++  +E I    S  G  ++I+ L+L
Sbjct: 69  VGEEDGLTYYALVNRVENDITKMASDYAENELELFRKTMELIIL--SDNGFATSISILNL 128

Query: 128 QLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGFVNLGVRSF 187
             E Q                  S  +K+K + +L     Q++WL    +G   L  R  
Sbjct: 129 ADELQ------------------SKKMKKKEVEQLLQSFVQEKWL-IGRNGEYTLHTRCI 188

Query: 188 LDLRSWFRT--NDIPS-CEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPS 247
           ++L  + R    D+   C VC +  ++++LC N  C + +H  C  K   + K+   CP+
Sbjct: 189 MELEHYIRNTYQDVAKICNVCRKVAIQSQLCEN--CGIPLHLQCAGKYF-HGKANPTCPN 248

Query: 248 CGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRD 282
           C   W    P++           ++  Q  SH + +T   R+
Sbjct: 249 CNESWPHEIPDLN----------QVSSQGPSHSQTETVRGRN 256

[Close]

BLAST of Carg02769 vs. Swiss-Prot
Match: sp|Q6P881|NSE1_XENTR (Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus tropicalis OX=8364 GN=nsmce1 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.9e-08
Identity = 59/279 (21.15%), Postives = 113/279 (40.50%), Query Frame = 0


Query: 3   ELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDN-DRQLFNNYLLTMNKALSFAQF 62
           +++  H   +Q L++ G +       L     E    N      ++++  +NK L     
Sbjct: 4   QINESHQRFLQVLMSHGIMESSLVRALHRHCCEVHKVNYMHDNLDDFVGVLNKHLQPLFM 63

Query: 63  ELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNI 122
           ++     + DG  YY LVN V ++ +K+ + Y+  ++  ++  +E I    S  G    I
Sbjct: 64  KIEKGVGEEDGLTYYALVNRVENDITKMASDYAENELELFRKTMELII--ISENGFAPPI 123

Query: 123 AALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGFVNL 182
           + L+L  E Q                  S  +K+K + +L     QD+WL    +G   L
Sbjct: 124 SILNLADELQ------------------SKKMKKKEVEQLLQSFVQDKWL-IGRNGEYTL 183

Query: 183 GVRSFLDLRSWFRT--NDIPS-CEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSK 242
             R  ++L  +      D+   C VC++  ++ +LC N  C + +H  C   +     + 
Sbjct: 184 HTRCIMELEHYILNTYQDVAKICNVCHKIAIQCQLCEN--CGIPLHLQC-AGIYFRGIAN 243

Query: 243 RACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKR 274
             CP+C   W    P++          +++  Q  SH +
Sbjct: 244 PLCPNCKESWPHEIPDL----------SQVSSQGPSHSQ 248

[Close]

BLAST of Carg02769 vs. TrEMBL
Match: tr|A0A1S3BMD8|A0A1S3BMD8_CUCME (non-structural maintenance of chromosomes element 1 homolog OS=Cucumis melo OX=3656 GN=LOC103491611 PE=4 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 2.7e-135
Identity = 244/314 (77.71%), Postives = 266/314 (84.71%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           M ELSWRHHTLIQ+LL+RGPLRED FHLLF RIT K+PDND+Q+FN+YLLT+NKALSFAQ
Sbjct: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIAF+KAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           I+AL+LQLENQLGD G QS VIP AFKNFS S KEKTIAELAQD+WL+CTP+GFVNLGVR
Sbjct: 121 ISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFR+ND+PSCEVCNEAGVKAELCS+E CTVRVH YCLKKMLSNKKSKRACP C
Sbjct: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300
           GT+W+ST  N+E KEE DEPD R                      PN DS   A+ASQPP
Sbjct: 241 GTRWQSTMSNIESKEEVDEPDTRTXXXXXXXXXXXXXXXXXXXXXPNEDS--TAEASQPP 300

Query: 301 PDTRRITRSSAHPR 315
           PDTRR TR+S   R
Sbjct: 301 PDTRRATRNSTRQR 312

[Close]

BLAST of Carg02769 vs. TrEMBL
Match: tr|A0A0A0KZ19|A0A0A0KZ19_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G269750 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 9.1e-123
Identity = 230/314 (73.25%), Postives = 250/314 (79.62%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           M ELSWRHHTLIQ+LL+RGPLRED FHLLF +IT K+PDND+Q+FN+YLLT+NKALSFAQ
Sbjct: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA +KAIVEAIAQD SAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           I+AL+LQLENQLGD GSQS VIP AFKNFS S KEKTIAELAQD+WL+CTPDGFVNLGVR
Sbjct: 121 ISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFR+ND+PSCEVCNEAGVKAELCS E CTVRVH YCLKKMLSNKKSK+ACP C
Sbjct: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300
           GT+W+ST  N+E K                                          SQPP
Sbjct: 241 GTRWQSTTSNIEPK--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPP 300

Query: 301 PDTRRITRSSAHPR 315
           P TRR TRSSA  R
Sbjct: 301 P-TRRTTRSSARQR 311

[Close]

BLAST of Carg02769 vs. TrEMBL
Match: tr|A0A2P4JZW3|A0A2P4JZW3_QUESU (Non-structural maintenance of chromosomes element 1 like OS=Quercus suber OX=58331 GN=CFP56_45914 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.5e-104
Identity = 198/319 (62.07%), Postives = 233/319 (73.04%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           M ELSWRH TLIQALL+RGPLR+D FH +F  +T K+P   +Q F+ YLL +NKALS+ Q
Sbjct: 1   MAELSWRHQTLIQALLSRGPLRDDQFHPIFNGLTGKNPGTHKQAFDEYLLKINKALSYVQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
            ELRG RNQYDGRVYYG+VN VSDEQSKLGTKYSVPQIAFYKAI+EAI QD +AQG ISN
Sbjct: 61  CELRGFRNQYDGRVYYGVVNTVSDEQSKLGTKYSVPQIAFYKAIIEAIVQDATAQGSISN 120

Query: 121 IAALHLQLENQ-LGDAGSQSHV----IPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFV 180
           I AL+L+LENQ L   GSQS      +PPA KNFS+S KEKT+ EL +DQWLN TPDG +
Sbjct: 121 IQALNLRLENQVLTSTGSQSQCDPTKVPPAVKNFSLSQKEKTLDELVRDQWLNRTPDGII 180

Query: 181 NLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKR 240
            LGVRSFLDLRS+FR NDIPSC+VCNEAGVKA++C N+ CTVR+H YCLKK  S ++ +R
Sbjct: 181 GLGVRSFLDLRSYFRNNDIPSCQVCNEAGVKADVCQNDSCTVRIHKYCLKKFFSQRRGER 240

Query: 241 ACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQ 300
            CPSCGT+W    P  E  +EEDE D   Q Q     R K RL        +     ++Q
Sbjct: 241 VCPSCGTEWNYVVPKAELIDEEDEADVPTQTQPPRGPRTK-RLRSSKTDSADVVGTGSSQ 300

Query: 301 ASQPPPDTRRITRSSAHPR 315
           AS+P  D RR TRS+A  R
Sbjct: 301 ASRPTSDLRRTTRSTACSR 318

[Close]

BLAST of Carg02769 vs. TrEMBL
Match: tr|M5WH05|M5WH05_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G153500 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.3e-104
Identity = 198/316 (62.66%), Postives = 240/316 (75.95%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           M EL+WRH T+IQALL+RGPL+ED FH +FT +T K+P +DRQ F+++LL +NKALS+ Q
Sbjct: 1   MTELNWRHQTVIQALLSRGPLKEDQFHRIFTGLTGKTPGSDRQRFDDFLLKINKALSYVQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCR QYDG+VYYG+VNNVSDE+SKLGTKYSV QIAFYKAI+EAI QD +AQG ISN
Sbjct: 61  FELRGCRFQYDGQVYYGVVNNVSDEESKLGTKYSVAQIAFYKAIIEAIVQDGAAQGTISN 120

Query: 121 IAALHLQLENQ-LGDAGSQSH----VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFV 180
           I AL+L+LENQ L    SQSH     +PPA KNFSIS+KEKT+ EL QDQWL+ TPD ++
Sbjct: 121 IDALNLRLENQVLMGTTSQSHGGLPHVPPALKNFSISMKEKTLDELVQDQWLSVTPDNYI 180

Query: 181 NLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKR 240
            LGVRSFLDLRSWFR+ND+P+CEVCNEAGVKA LC  EGC  R+H YCLKK+ S +K +R
Sbjct: 181 GLGVRSFLDLRSWFRSNDVPACEVCNEAGVKAALCQKEGCIARIHEYCLKKLFSERKGER 240

Query: 241 ACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQ 300
            CPSCGTQW+ T    E   E+DEP+   Q Q     +KK     +I    +GD   ++Q
Sbjct: 241 VCPSCGTQWQYTVTKAE-AVEDDEPNYPTQSQPPVGPKKKRLRRNEIG---DGDISGSSQ 300

Query: 301 ASQP-PPDTRRITRSS 311
           AS P  P+ RR TRSS
Sbjct: 301 ASLPGGPNLRRSTRSS 312

[Close]

BLAST of Carg02769 vs. TrEMBL
Match: tr|A0A2I4ENU2|A0A2I4ENU2_9ROSI (non-structural maintenance of chromosomes element 1 homolog OS=Juglans regia OX=51240 GN=LOC108991331 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 3.4e-101
Identity = 191/319 (59.87%), Postives = 233/319 (73.04%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           M ELSWRH TLIQALL+RGPL++D FH +FT +T K+    ++LF+ YLL +NK+LS+ Q
Sbjct: 1   MSELSWRHQTLIQALLSRGPLKDDEFHSIFTALTGKNSGAHKRLFDEYLLKINKSLSYVQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
            ELRG RNQYDG++YYG+VNN+SDEQSKLGTKYSVPQIAF+KAI+EAI QD +A+G IS+
Sbjct: 61  CELRGFRNQYDGQIYYGVVNNISDEQSKLGTKYSVPQIAFFKAIIEAILQDAAAEGSISD 120

Query: 121 IAALHLQLENQ-LGDAGSQSH----VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFV 180
           I  L+++LE Q L   GSQS      +PPA KNFSIS K+K + EL +DQWL  TPDG +
Sbjct: 121 IDVLNIRLETQVLTGTGSQSQGGPTQVPPALKNFSISQKQKALDELVRDQWLTRTPDGNI 180

Query: 181 NLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKR 240
            LGVRSFLDLRS+FR NDIP C+VCNEAGVKAELC NE CTVRVH YCLKK+ S +K +R
Sbjct: 181 GLGVRSFLDLRSYFRNNDIPPCQVCNEAGVKAELCQNESCTVRVHKYCLKKLFSQRKGER 240

Query: 241 ACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQ 300
            CPSCGTQW   AP  E  EEE+E +A  Q Q  S  ++K RL        N      +Q
Sbjct: 241 VCPSCGTQWHYVAPKPELIEEENEAEAPTQSQPPSGSKRK-RLESSKPGDANAVRTGPSQ 300

Query: 301 ASQPPPDTRRITRSSAHPR 315
           AS+P  D RR TRS+   +
Sbjct: 301 ASRPTSDLRRTTRSTTRSK 318

The following BLAST results are available for this feature:

BLAST of Carg02769 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957637.1	1.0e-178	99.04	non-structural maintenance of chromosomes element 1 homolog [Cucurbita moschata]	[more]
XP_022995424.1	3.0e-178	99.04	non-structural maintenance of chromosomes element 1 homolog isoform X2 [Cucurbit...	[more]
XP_022995422.1	3.0e-178	99.04	non-structural maintenance of chromosomes element 1 homolog isoform X1 [Cucurbit...	[more]
XP_023533198.1	6.7e-178	98.73	non-structural maintenance of chromosomes element 1 homolog [Cucurbita pepo subs...	[more]
XP_008449859.1	4.1e-135	77.71	PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Cucumis ...	[more]

BLAST of Carg02769 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G21140.1	5.4e-89	61.22	embryo defective 1379	[more]

BLAST of Carg02769 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6PAF4\|NSE1_XENLA	2.2e-10	21.99	Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus laevis OX...	[more]
sp\|Q6P881\|NSE1_XENTR	5.9e-08	21.15	Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus tropicali...	[more]

BLAST of Carg02769 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BMD8\|A0A1S3BMD8_CUCME	2.7e-135	77.71	non-structural maintenance of chromosomes element 1 homolog OS=Cucumis melo OX=3...	[more]
tr\|A0A0A0KZ19\|A0A0A0KZ19_CUCSA	9.1e-123	73.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G269750 PE=4 SV=1	[more]
tr\|A0A2P4JZW3\|A0A2P4JZW3_QUESU	1.5e-104	62.07	Non-structural maintenance of chromosomes element 1 like OS=Quercus suber OX=583...	[more]
tr\|M5WH05\|M5WH05_PRUPE	3.3e-104	62.66	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G153500 PE=4 SV=1	[more]
tr\|A0A2I4ENU2\|A0A2I4ENU2_9ROSI	3.4e-101	59.87	non-structural maintenance of chromosomes element 1 homolog OS=Juglans regia OX=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006281	DNA repair

Vocabulary: **Cellular Component**
Term	Definition
GO:0030915	Smc5-Smc6 complex

Vocabulary: **INTERPRO**
Term	Definition
IPR036388	WH-like_DNA-bd_sf
IPR011513	Nse1
IPR014857	Znf_RING-like
IPR013083	Znf_RING/FYVE/PHD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
cellular_component	GO:0030915	Smc5-Smc6 complex
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02769-RA	Carg02769-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.10.2370		coord: 4..82 e-value: 1.1E-6 score: 30.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 290..305
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 196..254 e-value: 9.6E-11 score: 43.0
IPR014857	Zinc finger, RING-like	PFAM	PF08746	zf-RING-like	coord: 197..240 e-value: 3.4E-9 score: 36.8
IPR014857	Zinc finger, RING-like	CDD	cd16493	RING-CH-C4HC3_NSE1	coord: 196..242 e-value: 1.30342E-12 score: 60.9065
IPR011513	Non-structural maintenance of chromosomes element 1	PFAM	PF07574	SMC_Nse1	coord: 8..185 e-value: 4.8E-41 score: 140.7
IPR011513	Non-structural maintenance of chromosomes element 1	PANTHER	PTHR20973	NON-SMC ELEMENT 1-RELATED	coord: 2..269
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	G3DSA:1.10.10.10		coord: 84..192 e-value: 8.1E-8 score: 34.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg02769	Cla003146	Watermelon (97103) v1	carwmB0928
Carg02769	Csa4G269750	Cucumber (Chinese Long) v2	carcuB0935
Carg02769	MELO3C014703	Melon (DHL92) v3.5.1	carmeB0910
Carg02769	ClCG02G024200	Watermelon (Charleston Gray)	carwcgB0900
Carg02769	CSPI04G12760	Wild cucumber (PI 183967)	carcpiB0958
Carg02769	Cucsa.152960	Cucumber (Gy14) v1	carcgyB1040
Carg02769	CmaCh02G011890	Cucurbita maxima (Rimu)	carcmaB1268
Carg02769	CmoCh02G012210	Cucurbita moschata (Rifu)	carcmoB1237
Carg02769	Lsi10G009400	Bottle gourd (USVL1VR-Ls)	carlsiB838
Carg02769	Cp4.1LG05g05440	Cucurbita pepo (Zucchini)	carcpeB1283
Carg02769	CsGy4G011510	Cucumber (Gy14) v2	carcgybB0908
Carg02769	MELO3C014703.2	Melon (DHL92) v3.6.1	carmedB0917
Carg02769	CsaV3_4G017330	Cucumber (Chinese Long) v3	carcucB0959
Carg02769	Cla97C02G050430	Watermelon (97103) v2	carwmbB0966
Carg02769	Bhi10G000372	Wax gourd	carwgoB1067

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg02769	Silver-seed gourd	carcarB464
Carg02769	Silver-seed gourd	carcarB498
Carg02769	Cucumber (Gy14) v2	carcgybB0905
Carg02769	Cucumber (Gy14) v1	carcgyB1039
Carg02769	Cucurbita maxima (Rimu)	carcmaB1258
Carg02769	Cucurbita maxima (Rimu)	carcmaB1267
Carg02769	Cucurbita moschata (Rifu)	carcmoB1227
Carg02769	Cucurbita moschata (Rifu)	carcmoB1236
Carg02769	Cucurbita pepo (Zucchini)	carcpeB1273
Carg02769	Cucurbita pepo (Zucchini)	carcpeB1276
Carg02769	Wild cucumber (PI 183967)	carcpiB0954
Carg02769	Cucumber (Chinese Long) v2	carcuB0932
Carg02769	Cucumber (Chinese Long) v3	carcucB0955