Cp4.1LG05g04450 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG05g04450
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Protein FAF-like, chloroplastic
Location	Cp4.1LG05 : 2595401 .. 2596693 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACTCTGTTCCATTGATGAACTCCTTCAACCATTGCAAGTCCTTTCAGAAACAGGGCATCCTTACCATTCTCCCCTCCCATAATACTCAGTTACCCATTGACCCACCTCCTTCCCTGAGGAGAACTCTCTCCGCCGACATGTCTTCTGCTAAGTGGATCACTCGCCATGGATCTCCGGCGATCAGCAAAACTGCCTCTTTTCAAGCTTTGTCGGCTGCTCATTCCTCGTCCTTTGAACAGAGAGTTGGGTTTTCGTGTTCTGTTCCACAAGATCATAAGAACAAGGTGGAGTCTCGAAAACAAGAGGATTTGGATTCTTGGAGGTCGATTCTGTTTCAGAACTCTGTTTCTGATGCTCCTAAATCCCCTGTTCTTCCTTATGTTCATCCTCTTGTTAAGAAATCAACTAACTCTCTTGGTGAAAATAGTCTTTTAATTTGTACTGAGAGTCTCGGGTCTGAGTCTGGCTCCGATGGGTTTTCGTCGTACTCGTCGTCGGAGGCTGGAGATTTTGACGGCGAGATGATGAAAACAGAGTACCCATTTCAATGGAAGCCGGTTAAATTTGGCCGGAAGAAAACGCCGCCGAGGTCTTTTCCTCCGATGATTTCTTCTCTCACTTCCTCTGACGGCGGCTCTGTTTCCATTCAGTCCCGCCGGGAAAATGGTCGGTTAATTCTCGACGCCTGCTCTGTTCCGTCTCAGAAAAACTTCCGAGCAGAACGCCGGGATGGGCGTCTGATTCTCTCTTTTGTTACTACTCCGGCGAAATTAAACGTTCAAGAGGAAGAAGACGAGTTTGAAGAATTAATTGCTGGGGATTTTGAGGAAGTGAAAGAATCGGAAGACGAGGAGAACGATTTGGAAGCCGAGGAATTGGAAATTCCGATGGAGAAGACTCCGATACTGTCGAGCTCTGTTATGAACTTCCACCGATTAGCAATGATGATGAAGAAACCTAATGGGTTGATCAATCGGAATCCGGCGTGGCCGGAGGAAAAAGATGCTCCACTGTCACAGTCACTCCCAACGCGTCCTCCGTCGCTTGCGGCGGCTTCTCTGAATCCATACGAGTACTACTGGCAATCAAAACCCACCGGAATTAAAAACCCAATTGGCCGACAAGAAAATCAGGTGATAGACAATGAAACAGCGAATGAGAAACAGCAAATTAAGGTTGTGAGAGGGAACAGAGGAGAGTGTTTGGTTCCATTATCGAATTGCTGTAAAGTGCCAAGAAGGTCTCTTGTTCTTCTCCGGGAGCACTGCTGCATTGCCACCACCTGA

mRNA sequence

ATGGCGGACTCTGTTCCATTGATGAACTCCTTCAACCATTGCAAGTCCTTTCAGAAACAGGGCATCCTTACCATTCTCCCCTCCCATAATACTCAGTTACCCATTGACCCACCTCCTTCCCTGAGGAGAACTCTCTCCGCCGACATGTCTTCTGCTAAGTGGATCACTCGCCATGGATCTCCGGCGATCAGCAAAACTGCCTCTTTTCAAGCTTTGTCGGCTGCTCATTCCTCGTCCTTTGAACAGAGAGTTGGGTTTTCGTGTTCTGTTCCACAAGATCATAAGAACAAGGTGGAGTCTCGAAAACAAGAGGATTTGGATTCTTGGAGGTCGATTCTGTTTCAGAACTCTGTTTCTGATGCTCCTAAATCCCCTGTTCTTCCTTATGTTCATCCTCTTGTTAAGAAATCAACTAACTCTCTTGGTGAAAATAGTCTTTTAATTTGTACTGAGAGTCTCGGGTCTGAGTCTGGCTCCGATGGGTTTTCGTCGTACTCGTCGTCGGAGGCTGGAGATTTTGACGGCGAGATGATGAAAACAGAGTACCCATTTCAATGGAAGCCGGTTAAATTTGGCCGGAAGAAAACGCCGCCGAGGTCTTTTCCTCCGATGATTTCTTCTCTCACTTCCTCTGACGGCGGCTCTGTTTCCATTCAGTCCCGCCGGGAAAATGGTCGGTTAATTCTCGACGCCTGCTCTGTTCCGTCTCAGAAAAACTTCCGAGCAGAACGCCGGGATGGGCGTCTGATTCTCTCTTTTGTTACTACTCCGGCGAAATTAAACGTTCAAGAGGAAGAAGACGAGTTTGAAGAATTAATTGCTGGGGATTTTGAGGAAGTGAAAGAATCGGAAGACGAGGAGAACGATTTGGAAGCCGAGGAATTGGAAATTCCGATGGAGAAGACTCCGATACTGTCGAGCTCTGTTATGAACTTCCACCGATTAGCAATGATGATGAAGAAACCTAATGGGTTGATCAATCGGAATCCGGCGTGGCCGGAGGAAAAAGATGCTCCACTGTCACAGTCACTCCCAACGCGTCCTCCGTCGCTTGCGGCGGCTTCTCTGAATCCATACGAGTACTACTGGCAATCAAAACCCACCGGAATTAAAAACCCAATTGGCCGACAAGAAAATCAGGTGATAGACAATGAAACAGCGAATGAGAAACAGCAAATTAAGGTTGTGAGAGGGAACAGAGGAGAGTGTTTGGTTCCATTATCGAATTGCTGTAAAGTGCCAAGAAGGTCTCTTGTTCTTCTCCGGGAGCACTGCTGCATTGCCACCACCTGA

Coding sequence (CDS)

ATGGCGGACTCTGTTCCATTGATGAACTCCTTCAACCATTGCAAGTCCTTTCAGAAACAGGGCATCCTTACCATTCTCCCCTCCCATAATACTCAGTTACCCATTGACCCACCTCCTTCCCTGAGGAGAACTCTCTCCGCCGACATGTCTTCTGCTAAGTGGATCACTCGCCATGGATCTCCGGCGATCAGCAAAACTGCCTCTTTTCAAGCTTTGTCGGCTGCTCATTCCTCGTCCTTTGAACAGAGAGTTGGGTTTTCGTGTTCTGTTCCACAAGATCATAAGAACAAGGTGGAGTCTCGAAAACAAGAGGATTTGGATTCTTGGAGGTCGATTCTGTTTCAGAACTCTGTTTCTGATGCTCCTAAATCCCCTGTTCTTCCTTATGTTCATCCTCTTGTTAAGAAATCAACTAACTCTCTTGGTGAAAATAGTCTTTTAATTTGTACTGAGAGTCTCGGGTCTGAGTCTGGCTCCGATGGGTTTTCGTCGTACTCGTCGTCGGAGGCTGGAGATTTTGACGGCGAGATGATGAAAACAGAGTACCCATTTCAATGGAAGCCGGTTAAATTTGGCCGGAAGAAAACGCCGCCGAGGTCTTTTCCTCCGATGATTTCTTCTCTCACTTCCTCTGACGGCGGCTCTGTTTCCATTCAGTCCCGCCGGGAAAATGGTCGGTTAATTCTCGACGCCTGCTCTGTTCCGTCTCAGAAAAACTTCCGAGCAGAACGCCGGGATGGGCGTCTGATTCTCTCTTTTGTTACTACTCCGGCGAAATTAAACGTTCAAGAGGAAGAAGACGAGTTTGAAGAATTAATTGCTGGGGATTTTGAGGAAGTGAAAGAATCGGAAGACGAGGAGAACGATTTGGAAGCCGAGGAATTGGAAATTCCGATGGAGAAGACTCCGATACTGTCGAGCTCTGTTATGAACTTCCACCGATTAGCAATGATGATGAAGAAACCTAATGGGTTGATCAATCGGAATCCGGCGTGGCCGGAGGAAAAAGATGCTCCACTGTCACAGTCACTCCCAACGCGTCCTCCGTCGCTTGCGGCGGCTTCTCTGAATCCATACGAGTACTACTGGCAATCAAAACCCACCGGAATTAAAAACCCAATTGGCCGACAAGAAAATCAGGTGATAGACAATGAAACAGCGAATGAGAAACAGCAAATTAAGGTTGTGAGAGGGAACAGAGGAGAGTGTTTGGTTCCATTATCGAATTGCTGTAAAGTGCCAAGAAGGTCTCTTGTTCTTCTCCGGGAGCACTGCTGCATTGCCACCACCTGA

Protein sequence

MADSVPLMNSFNHCKSFQKQGILTILPSHNTQLPIDPPPSLRRTLSADMSSAKWITRHGSPAISKTASFQALSAAHSSSFEQRVGFSCSVPQDHKNKVESRKQEDLDSWRSILFQNSVSDAPKSPVLPYVHPLVKKSTNSLGENSLLICTESLGSESGSDGFSSYSSSEAGDFDGEMMKTEYPFQWKPVKFGRKKTPPRSFPPMISSLTSSDGGSVSIQSRRENGRLILDACSVPSQKNFRAERRDGRLILSFVTTPAKLNVQEEEDEFEELIAGDFEEVKESEDEENDLEAEELEIPMEKTPILSSSVMNFHRLAMMMKKPNGLINRNPAWPEEKDAPLSQSLPTRPPSLAAASLNPYEYYWQSKPTGIKNPIGRQENQVIDNETANEKQQIKVVRGNRGECLVPLSNCCKVPRRSLVLLREHCCIATT

Homology

[Close]

BLAST of Cp4.1LG05g04450 vs. Swiss-Prot
Match: FAFL_ARATH (Protein FAF-like, chloroplastic OS=Arabidopsis thaliana GN=At5g22090 PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 3.0e-43
Identity = 162/473 (34.25%), Postives = 239/473 (50.53%), Query Frame = 1


Query: 18  QKQGILTILP--SHNTQLPIDPPPSLRRTLSADMSSAKWITRHGSPAISKTASFQALSAA 77
           ++QGI++IL   S NT       PSLRRT SAD+SS  W++++G   + + +S + L   
Sbjct: 18  KQQGIVSILGGISSNTS----SAPSLRRTFSADLSSKTWVSQNGFSPMKRISSSEKLRPD 77

Query: 78  HSSSFEQRVGFSCSVPQDHKNKVESRKQEDL-----DSWRSILFQNSVSDAPKSPVLP-Y 137
              + E+         Q  ++K + +K+E++     D W SIL +   +++ K  V P Y
Sbjct: 78  EEEAEEESRSGVDIWAQIQQDKNDKKKEEEIEPGQSDVWSSILSEKKKTESSKDTVPPPY 137

Query: 138 VHPLVKKSTNSLGENSLLICTESLGSESGSDGFSSYSSSEAGDFD--------------- 197
           VHPL+K+++ SL E SL ICTESLGSE+G DGFSS++SSE GD +               
Sbjct: 138 VHPLMKRAS-SLSEKSLEICTESLGSETGCDGFSSHASSETGDAEIEIHDETNLVVNVTE 197

Query: 198 ---GEMMKTEYPFQWKP---VKFGRKKTPPRSFPPMISSLTSSDGGSVSIQSRRENGRLI 257
               E+ +TE   + +    V     + PP SFPP I SL+S  G S+ +++RR+NGRL+
Sbjct: 198 TKVEEITETEIVVEQESSIIVPNHIIELPPGSFPPPIRSLSSQSGSSLHMKTRRDNGRLV 257

Query: 258 LDACSVPSQKNFRAERRDGRLILSFVTTPAKLNVQEEEDEFEELIAGDFEEVKESEDEEN 317
           L+A S+PS  NF A+R+DGRL+L+F     + N  +E++   E+   D EE +E E+E+ 
Sbjct: 258 LEAVSMPSHNNFSAKRQDGRLLLTFAEISNEPNYDKEDEIDSEVQWFDEEEEEEEEEEDE 317

Query: 318 DLEAEE--------LEIPMEKTPILSSSVMNFHRLAMMMKKPNGLINRNPAWP------- 377
           + EA +        L   M + PI     +  HRLA    KP G+  RN  WP       
Sbjct: 318 EEEAPDEFAYKPNGLLYKMAQKPI----PITVHRLA---HKPIGVPKRNSRWPMADEFDT 377

Query: 378 -EEKDAPLSQSLP-----------TRPPS-----LAAASLNPYEYYWQSKPTGIKNPIGR 430
             +   P+  SLP           T+PPS     + AA  N  +Y W+S  T    P   
Sbjct: 378 KSDLSTPVVHSLPPRPRVAQLARSTKPPSTVDDTVGAACFNTCDYSWKSTNTESFGP--- 437

[Close]

BLAST of Cp4.1LG05g04450 vs. Swiss-Prot
Match: FAF1_ARATH (Protein FANTASTIC FOUR 1 OS=Arabidopsis thaliana GN=FAF1 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.1e-10
Identity = 69/189 (36.51%), Postives = 100/189 (52.91%), Query Frame = 1


Query: 113 LFQNSVSDAPKSPVLPYVHPLVKKSTNSLGENSLLICTESLGSESGSDGFSSYS--SSEA 172
           + QN   D  K+    YV+P+ K    S+ + SL +CTESLG+E+GSD     S  + EA
Sbjct: 37  IVQNREDDTKKTA---YVYPIEK---RSVAKLSLEMCTESLGTENGSDSGDEMSLLALEA 96

Query: 173 GDFDGEMMKTEYPFQWKPVKFGRKKTPPRSFPPMISSLTSSDGGSVSIQSRRENGRLILD 232
            +       T      KP K     T   SFPP ++S+   +  S  ++S +E+GRL++ 
Sbjct: 97  TNISKSPRLTT-----KPQKETSFMTRENSFPPPLNSVNGFN-NSRMVKSYKEDGRLVVQ 156

Query: 233 A---CSVPSQKNFRAERRDGRLILSFVTTPAKLNVQEEEDEFEELIAGDFEEVKESEDEE 292
           A   CS P  + F +ERR+GRL L    +   LN Q+ E+EFEE    D  + +E E+EE
Sbjct: 157 AIRVCSPP--RCFVSERREGRLRLCL--SQNSLNSQDAEEEFEEEDEDDQYDAEEEEEEE 209

Query: 293 NDLEAEELE 297
            + E EE E
Sbjct: 217 EEEEEEEEE 209

[Close]

BLAST of Cp4.1LG05g04450 vs. Swiss-Prot
Match: FAF2_ARATH (Protein FANTASTIC FOUR 2 OS=Arabidopsis thaliana GN=FAF2 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 4.4e-10
Identity = 64/188 (34.04%), Postives = 91/188 (48.40%), Query Frame = 1


Query: 107 DSWRSILFQNSVSD----APKSPVLPYVHPLVKKSTNSLGENSLLICTESLGSESGSDGF 166
           D    + F  S+SD    A       YVHP+ K+S + L E SL +CTESLG+E+GS+  
Sbjct: 18  DDMGGLSFLQSMSDITSIAQTKEDKAYVHPMEKRSVSKLNEKSLEMCTESLGTETGSESG 77

Query: 167 SSYSSSEAGDFDGEMMKTEYPFQWKPVKFGR--KKTPP----RSFPPMISSLTSSDGGSV 226
              S      F+        P Q KP +      KTPP     SFPP I  +  S    +
Sbjct: 78  DELSLLA---FEATTTPRAPPRQLKPQEDTNLPDKTPPMSRNNSFPPPIKFVEDSKYNRM 137

Query: 227 SIQSRRENGRLILDACSVPSQKN-FRAERRDGRLILSFVTTPAKLNVQEEEDEFEELIAG 284
            ++   E+GR+++ A  V S  + F +ER +GRL L   +  + L+   EE+E EE   G
Sbjct: 138 -VRWLGEDGRIVVQAIRVSSPPSCFVSERGEGRLRLILTSESSLLSHNHEEEEEEETEEG 197

[Close]

BLAST of Cp4.1LG05g04450 vs. Swiss-Prot
Match: FAF4_ARATH (Protein FANTASTIC FOUR 4 OS=Arabidopsis thaliana GN=FAF4 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.8e-09
Identity = 62/215 (28.84%), Postives = 99/215 (46.05%), Query Frame = 1


Query: 87  SCSVPQDHKNKVESRKQEDLDSWRSI-LFQNSVSDAPKSPVLPYVHPLVKKSTNSLGENS 146
           + S+P    N   S    +  SW  +    NS S+  +   LP        S  +L + S
Sbjct: 56  AASLPSSSPNP-SSNSDTNSGSWSFLESLSNSSSNDKEKKTLPLFQS--PSSRRTLSDES 115

Query: 147 LLICTESLGSESGSDGFSSYSSSEAGDFDGEMMKTEYPFQWKPVKFGRKKTPPRSFPPMI 206
           L +CTESLGSE+GSD       S + +      +T       P +  RK+    S PP +
Sbjct: 116 LALCTESLGSETGSDIIHEDMFSISSELQTMETRTTSTTS-NPSRQDRKRNTMASLPPPL 175

Query: 207 SSLTSSDGGSVSIQSRRENGRLILDACSVPSQKNFRAERRDGRLILSF-------VTTPA 266
           +S+   D   + ++S RENGRL++ A   P +     +R +G + L+        + T  
Sbjct: 176 TSMIGFD--CIEVKSHRENGRLVMMATRPPPRNRCLQDRSNGCVRLAILIDSDDHIETET 235

Query: 267 KLNVQEEEDEFEELIAGDFEEVKESEDEENDLEAE 294
           K   +EEE+E  E +  + EE+ E ++EE + E E
Sbjct: 236 KEEKEEEEEETIETVRDNEEEIPEYKEEEEEKEEE 264

[Close]

BLAST of Cp4.1LG05g04450 vs. Swiss-Prot
Match: FAF3_ARATH (Protein FANTASTIC FOUR 3 OS=Arabidopsis thaliana GN=FAF3 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.9e-06
Identity = 69/282 (24.47%), Postives = 120/282 (42.55%), Query Frame = 1


Query: 24  TILPSHNTQLPIDPPPSLRRTLSADMSSAKWITRHGSPAISKTASFQALSAAHSSSFEQR 83
           T++     Q  ++ P +LR  LS+          H S           L ++H+     R
Sbjct: 3   TVVYQQGFQSQLNEPRALRLRLSSP-------NPHFSQPFGLALKSHLLDSSHAEDTRNR 62

Query: 84  VGFSCSVPQDHKNKVESRKQEDLDSWRSILFQNSVSDAPKSPVLP-------YVHPLVKK 143
                     + +K  +    D   W S+   +S S +              YV      
Sbjct: 63  ----------NDDKAAASPVSDSSGWSSLQSLSSGSSSSTKTTTSSEKESSYYVQR--PS 122

Query: 144 STNSLGENSLLICTESLGSESGSDGFSSYSSSEAGDFDGEMMKT-EYPFQWKPVKFGRKK 203
           S  +L + SL +CTE+LGSESGSD        E    D +     E   + + +K  ++ 
Sbjct: 123 SCRALSDQSLALCTENLGSESGSD---VTDIDELFSLDVQTKNLGETTTETRTLKSRKRS 182

Query: 204 TPPRSFPPMISSLTSSDGGSVSIQSRRENGRLILDACSVPSQKN-FRAERRDGRLILSFV 263
             P   PP ++++       + ++  RENGRL++ A + P +   F+A+R +GRL LS +
Sbjct: 183 VSPSDLPPPLTTMRGFQ--CIQMRPHRENGRLVMTATNAPPRNGCFQADRSNGRLRLSIL 242

Query: 264 TTPAKLNVQEEEDEFEELIAGDFEEVKESEDEENDLEAEELE 297
               +  V+ EE+  E     ++EE +E E++E++ E   +E
Sbjct: 243 KDSNEF-VENEEETIEPEETEEYEEEEEEEEDEDEDEVMGIE 259

[Close]

BLAST of Cp4.1LG05g04450 vs. TrEMBL
Match: A0A0A0KI67_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G426380 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 6.1e-128
Identity = 285/457 (62.36%), Postives = 328/457 (71.77%), Query Frame = 1


Query: 8   MNSFNHCKSFQKQGILTILPSHNTQLPIDPPPSLRRTLSADMSSAKWITRHGSPAISKTA 67
           M + ++  S QKQGILTILPS +   P  PPPSLRRTLSADMSS KW +      I K  
Sbjct: 1   MKTLHNYNSLQKQGILTILPSSDHHYPSLPPPSLRRTLSADMSSTKWCS-----PIKKIP 60

Query: 68  SFQALSAAHSSSFEQRVGFSCSVPQDHKNKVESRKQEDLDS--WRSILFQNSVSD-APKS 127
           S QA    H +S              + NK++S K    DS  W SIL  NSVSD  PKS
Sbjct: 61  SSQAF---HDNS--------------NNNKIDSSKHGVHDSVPWSSILLHNSVSDDPPKS 120

Query: 128 PVL--PYVHPLVKKSTNSLGENSLLICTESLGSESGSDGFSSYSSSEAGDFDGEMMKTEY 187
           PV+  PYVHPL+KK+++SL + SL ICTESLGSE+GSDGFSSY SSE GDFD  + +T+Y
Sbjct: 121 PVVAAPYVHPLLKKTSHSLSDISLQICTESLGSETGSDGFSSYPSSEDGDFDRLITETDY 180

Query: 188 P----FQWKPVKFGRKKTPPRSFPPMISSLTSSDGGSVSIQSRRENGRLILDACSVPSQK 247
                F+WKPVKF RKK+PPRSFPP ISSL S DG S+ IQSRRE+GRL+LDA SVPS+K
Sbjct: 181 SEIDTFEWKPVKFSRKKSPPRSFPPPISSLDSPDGVSICIQSRREDGRLMLDAVSVPSRK 240

Query: 248 NFRAERRDGRLILSFVTTPAKLNVQEEEDEFEELIAGDFEEVKESE-----DEENDLEAE 307
           NFRAERRDGRLILS   TP  L V EEE E EE+IAG+FEEVKESE     ++EN LE E
Sbjct: 241 NFRAERRDGRLILSLFRTPENLLVNEEE-ELEEMIAGEFEEVKESEIVEVGNDENVLEVE 300

Query: 308 ELEIPMEKTPILSSSVMNFHRLAMMMKKPNGLINRNPAWPEEKDA------PLSQSLPTR 367
           ELEIP+EKTP LSSSVMNFHRL  MMKK NGLINRNPAWP+EKDA      PLSQSLP R
Sbjct: 301 ELEIPIEKTPRLSSSVMNFHRLTNMMKKTNGLINRNPAWPKEKDASETPTTPLSQSLPPR 360

Query: 368 PPSLAAAS----LNPYEYYWQSKPT----GIKNPIGRQENQVI------DNETANEKQQI 427
           PPSL AA+    LN YEYYW+SKPT    GI+NP G+Q+ Q+       +N+ A+EKQQI
Sbjct: 361 PPSLTAATAGTFLNAYEYYWRSKPTGKSAGIQNPNGQQQTQITRKLISSNNQMADEKQQI 420

Query: 428 KVVRGNRGECLVPLSNCCKVPRRSLVLLREHCCIATT 431
            V++GNRG+ LVPLSN CKVPRRS VLLRE CCIATT
Sbjct: 421 LVLKGNRGDYLVPLSNGCKVPRRS-VLLREPCCIATT 433

[Close]

BLAST of Cp4.1LG05g04450 vs. TrEMBL
Match: A0A067LEM2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23902 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 8.1e-72
Identity = 209/514 (40.66%), Postives = 283/514 (55.06%), Query Frame = 1


Query: 7   LMNSFNHCKSFQK-------QGILTILPSHNTQLPIDPPPSLRRTLSADMSSAKWITRHG 66
           L  SF+   SF++       QGI++IL S +++L  + P  LRRTLSADMSS KW++++G
Sbjct: 4   LNKSFHSSSSFKEEVMVSKQQGIVSILGS-DSELKTNKP--LRRTLSADMSSKKWLSQNG 63

Query: 67  -SPAISKTASFQALSAA---HSSS-------FEQRVGFSCSVPQDHKNKVESRKQEDLDS 126
            S  + K AS +  S +    SSS       +E+      S+ Q+ K K +S  +   D 
Sbjct: 64  FSSRLKKIASSKEFSVSIITDSSSSEGDEDEYEKETEVWSSIQQE-KQKKDSSPRGQFDI 123

Query: 127 WRSILFQNSVSDAPKSPVLPYVHPLVKKSTNSLGENSLLICTESLGSESGSDGFSSYSSS 186
           W SIL Q +  +A      PYVHPLVK+S +SL E SL ICTESLGSE+GSDGFSSY  S
Sbjct: 124 WSSILTQKA-QEAKNLLPPPYVHPLVKRSASSLSEKSLEICTESLGSETGSDGFSSYPPS 183

Query: 187 EAGDFDG-----------------EMMKTEYPFQ-WKPVKFG----RKKTPPRSFPPMIS 246
           E GD +                  E +   Y  + W+ +K       KK PPR+FPP I 
Sbjct: 184 ETGDAEEDKEEEQQEEEEEEEEEEEKVSKNYDMEDWQVIKCNITAASKKLPPRTFPPPIP 243

Query: 247 SLTSSDGGSVSIQSRRENGRLILDACSVPSQKNFRAERRDGRLILSFVTTPAKLNVQEEE 306
           SL+S DG S+ ++ RR+NGR +L+A SVPSQ NF+AER+DGRL+LSF+ TP       ++
Sbjct: 244 SLSSRDGASLRMRPRRDNGRFVLEAISVPSQNNFKAERQDGRLVLSFIDTPDGEEEGTKK 303

Query: 307 DEFEELIAGDFEEVKESEDEENDL-----EAEELEIPMEKTPILSSSVMNFHRLAMMMKK 366
           +E  EL   + E+ +E E+E N+        EE+   ME+ P LS  ++N HRLA+M+ K
Sbjct: 304 NEM-ELFQVEIEDSEEEEEEVNERGGGGGGGEEMRYVMEQAPKLSGGIINVHRLALMINK 363

Query: 367 PNGLINRNPAW--------------PEEKD------APLSQSLPTRPP------------ 426
           P  L NRN AW               EE++      APL+QSLP RPP            
Sbjct: 364 PTMLANRNTAWSNKFNEVVKFEEEEEEEEEVNPNPIAPLTQSLPPRPPVGRSIPKPAAVA 423

Query: 427 SLAAASLNPYEYYWQSKPTGI------------KNPIGRQENQVIDNETANEK-QQIKVV 431
           + A AS+N YEYYW+ KP G             K+P    +  +  N   NEK Q++ V 
Sbjct: 424 TAATASVNAYEYYWKPKPMGTAGVTACLSPIAKKSPSNNDKYILTKNLIVNEKRQELSVW 483

[Close]

BLAST of Cp4.1LG05g04450 vs. TrEMBL
Match: B9RJ16_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1756120 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 3.9e-66
Identity = 202/525 (38.48%), Postives = 269/525 (51.24%), Query Frame = 1


Query: 18  QKQGILTILPSHNTQLPIDPPPSLRRTLSADMSSAKWITRHGSPAISKTASFQA--LSAA 77
           +KQGI++IL S   +      PSLRRTLSADMSS KW ++HG   + K AS     +S  
Sbjct: 23  KKQGIVSILGSDYERTK--SAPSLRRTLSADMSSKKWQSQHGFSPLKKIASSGEFPISIT 82

Query: 78  HSSSF-----------EQRVGFSC-SVPQDHKNKVESRKQEDLDSWRSILFQNSVSDAPK 137
            SSS            E R  F   S  Q+ K K +       D W SIL Q +  D   
Sbjct: 83  DSSSSSPSSLEGEYERESRGRFEIWSSIQEEKEKKDQENPGQFDIWSSILTQKAQEDTKT 142

Query: 138 SPVLPYVHPLVKKSTNSLGENSLLICTESLGSESGSDGFSSYSSSEAGDFDGEM------ 197
            P  PYVHPLVK+S +SL E SL ICTESLGSE+GSDGFSSY  SE G+ + +       
Sbjct: 143 LPP-PYVHPLVKRSASSLSEKSLEICTESLGSENGSDGFSSYPPSETGEAEEDKEEEQEQ 202

Query: 198 --------------MKTEYPFQWKPVKFGRKKTPPRSFPPMISSLTSSDGGSVSIQSRRE 257
                         M+  +  ++       KK+ P+SFPP + SL+S DG S+ ++ RR+
Sbjct: 203 EEQEQEERATPKYDMEDLHVAKYNFAASATKKSSPKSFPPPLPSLSSRDGASLRMKPRRD 262

Query: 258 NGRLILDACSVPSQKNFRAERRDGRLILSFVTTPAKLNVQEEEDEFE-ELIAGDFEEVKE 317
           NGRL+L+A SVPSQ NF+A+R+DGRL+L+F  +  K   Q+  + FE E+   + E   E
Sbjct: 263 NGRLVLEAVSVPSQNNFQAQRQDGRLVLTFADSLNK-EGQKGAEMFEIEIENSEDESETE 322

Query: 318 SEDEENDLEAEE--------------LEIPMEKTPILSSSVMNFHRLAMMMKKPNGLINR 377
           +E+EE ++E EE              +   ME+ P LS  V+N HRLA+MM KP  + NR
Sbjct: 323 TEEEEVEMEMEEAANERGRGAGGSGDVRFVMEQAPKLSGGVINVHRLALMMNKPMLISNR 382

Query: 378 NPAWPEEKD---------------APLSQSLPTRPP------------------------ 431
           NP WP + +                PL+QSLP RPP                        
Sbjct: 383 NPTWPNKFNEVQFEEGVEEVVKPITPLTQSLPPRPPVARMIPMPSTAVAAAGTVKAAAAA 442

[Close]

BLAST of Cp4.1LG05g04450 vs. TrEMBL
Match: A0A061GTX3_THECC (Chaperone DnaJ-domain superfamily protein OS=Theobroma cacao GN=TCM_041220 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.3e-65
Identity = 195/482 (40.46%), Postives = 258/482 (53.53%), Query Frame = 1


Query: 18  QKQGILTILPSHNTQLPIDPPPSLRRTLSADMSSAKWITRHGSPAISKTASFQAL--SAA 77
           +KQGI++IL S +T  P     SLRRTLSADMSS KW+T +G   + K AS +    S  
Sbjct: 25  KKQGIVSILGS-DTDRP-SRAASLRRTLSADMSSKKWLTEYGLSPLKKIASSEEFPFSII 84

Query: 78  HSSS------FEQRVGFSC-------SVPQDHKNKVESRKQEDLDSWRSILFQNSVSDAP 137
            SSS      +E+R            +  Q  KNK E  K    D W SI+ + +  D+ 
Sbjct: 85  DSSSEGGEEDYEERKDTEARGQFDIWTSIQQEKNKKELEKPGQFDMWTSIISEKAQEDSS 144

Query: 138 KSPVLPYVHPLVKKSTNSLGENSLLICTESLGSESGSDGFSSYSSSEAGDFDGEMMKTEY 197
           K    PY+HPLVK+S +SL E SL ICTESLGSE+GSDGFSSY  SE GD + +  + + 
Sbjct: 145 KPLTPPYIHPLVKRSASSLSEKSLEICTESLGSETGSDGFSSYPPSETGDMEEDKEEDQE 204

Query: 198 PFQWKPVKFGR-------------------KKTPPRSFPPMISSLTSSDGGSVSIQSRRE 257
             Q K  +  +                   KK+P RSFPP I SL+  DG SV +++ R+
Sbjct: 205 LQQQKQERVAQLNSFDGEEPRIVKYNYDVGKKSPHRSFPPPIPSLSRIDGASVRMKTHRD 264

Query: 258 NGRLILDACSVPSQKNFRAERRDGRLILSFV-TTPAK--------LNVQEEEDEFEELIA 317
           NGRL+L+A S+PS  NF A+R+DGRL+L+F  TTP++        +NV+EEE++  E + 
Sbjct: 265 NGRLVLEAVSMPSLNNFLAQRQDGRLVLTFANTTPSEAESMVNEVMNVEEEEEKEVEDLE 324

Query: 318 GDF----EEVKESE-DEENDLEAEELEIP--------MEKTPILSSSVMNFHRLAMMMKK 377
            +F    EE +ESE DEE + E  E EI         +E+ P LSS  MN HRLA+MM K
Sbjct: 325 EEFESFGEEEQESEIDEEEEEEISENEIEGVEDRCYVIEQPPKLSSGAMNVHRLAVMMNK 384

Query: 378 PNGLINRNPAWPEEKD------------------APLSQSLPTR----------PPSLAA 401
           P  L NRNP WP+  D                   PL+QSLP R          P + AA
Sbjct: 385 PIWLANRNPTWPKNFDEIVKFGEEREEKVVEPTAPPLAQSLPPRPRVGRLIPSPPSTAAA 444

[Close]

BLAST of Cp4.1LG05g04450 vs. TrEMBL
Match: B9HQ73_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s02170g PE=4 SV=2)

HSP 1 Score: 255.8 bits (652), Expect = 9.6e-65
Identity = 199/511 (38.94%), Postives = 268/511 (52.45%), Query Frame = 1


Query: 18  QKQGILTILPSHNTQLPIDPPPSLRRTLSADMSSAKWITRHGSPAISKTAS---FQALSA 77
           +KQGI++IL   + +       SLRRTLSADMSS KW  +HG   + K AS   F A  +
Sbjct: 25  KKQGIVSILGC-DVERTKSAAASLRRTLSADMSSKKWQAQHGFYPLKKIASSDHFPACDS 84

Query: 78  AHSSS----FEQRVGFS--------CSVPQDHKNKVESRKQEDLDSWRSILFQNSVSDAP 137
              SS    FE R   +         S  Q+ KNK E  K    D W SIL Q +  D+ 
Sbjct: 85  ITDSSEDEDFEDRPKETETRDQFDIWSSIQEDKNKKEVEKPGQFDVWSSILSQKAKEDS- 144

Query: 138 KSPVLPYVHPLVKKSTNSLGENSLLICTESLGSESGSDGFSSYSSSEAGDFDGEMMKTEY 197
              V PYVHPLVK+S +SL E SL ICTESLGSE+G DGFSSY  SE GD + E  + + 
Sbjct: 145 -KDVQPYVHPLVKRSASSLSEKSLEICTESLGSETGCDGFSSYPPSEIGDAEDEKEEEQL 204

Query: 198 P------FQWKPVKFGR--------KKTPPRSFPPMISSLTSSDGGSVSIQSRRENGRLI 257
                  F  + ++  +        KK+ PRSFPP I SL+S DG SV ++SRR+NGRL+
Sbjct: 205 QERVTQKFDMEDLRAAKYNLAASNSKKSQPRSFPPPIPSLSSRDGASVHMRSRRDNGRLV 264

Query: 258 LDACSVPSQKNFRAERRDGRLILSFVTTPAKLNVQEEE----------DEFE-ELIAGDF 317
           L+  SVPSQ NF A+R+DGRL+L+   T    N +EEE          ++F+ E+   + 
Sbjct: 265 LEVVSVPSQNNFHAQRQDGRLVLTLANTA---NQEEEERQKNEEMSDVEQFDVEIENSEG 324

Query: 318 EEVKESEDEENDLE---------AEELEIPMEKTPILSSSVMNFHRLAMMMKKPNGLINR 377
           +E  E E EE ++E          E +   ME+TP LSS +++ HRLA+MM K   L NR
Sbjct: 325 KEEVEEEIEEGEVEDGEDKRGGGGEGVRFVMEETPKLSSGILSVHRLALMMNKSLVLANR 384

Query: 378 NPAWPEEKD---------------APLSQSLPTRPP--------------------SLAA 431
           NPAWP + +                P++QSLP R P                    + A 
Sbjct: 385 NPAWPNKFEDMTKFGDEVEVVDPITPITQSLPPRRPPATRLIPSPPVATMAAAAATAKAT 444

[Close]

BLAST of Cp4.1LG05g04450 vs. TAIR10
Match: AT5G22090.1 (AT5G22090.1 Protein of unknown function (DUF3049))

HSP 1 Score: 177.6 bits (449), Expect = 1.7e-44
Identity = 162/473 (34.25%), Postives = 239/473 (50.53%), Query Frame = 1


Query: 18  QKQGILTILP--SHNTQLPIDPPPSLRRTLSADMSSAKWITRHGSPAISKTASFQALSAA 77
           ++QGI++IL   S NT       PSLRRT SAD+SS  W++++G   + + +S + L   
Sbjct: 18  KQQGIVSILGGISSNTS----SAPSLRRTFSADLSSKTWVSQNGFSPMKRISSSEKLRPD 77

Query: 78  HSSSFEQRVGFSCSVPQDHKNKVESRKQEDL-----DSWRSILFQNSVSDAPKSPVLP-Y 137
              + E+         Q  ++K + +K+E++     D W SIL +   +++ K  V P Y
Sbjct: 78  EEEAEEESRSGVDIWAQIQQDKNDKKKEEEIEPGQSDVWSSILSEKKKTESSKDTVPPPY 137

Query: 138 VHPLVKKSTNSLGENSLLICTESLGSESGSDGFSSYSSSEAGDFD--------------- 197
           VHPL+K+++ SL E SL ICTESLGSE+G DGFSS++SSE GD +               
Sbjct: 138 VHPLMKRAS-SLSEKSLEICTESLGSETGCDGFSSHASSETGDAEIEIHDETNLVVNVTE 197

Query: 198 ---GEMMKTEYPFQWKP---VKFGRKKTPPRSFPPMISSLTSSDGGSVSIQSRRENGRLI 257
               E+ +TE   + +    V     + PP SFPP I SL+S  G S+ +++RR+NGRL+
Sbjct: 198 TKVEEITETEIVVEQESSIIVPNHIIELPPGSFPPPIRSLSSQSGSSLHMKTRRDNGRLV 257

Query: 258 LDACSVPSQKNFRAERRDGRLILSFVTTPAKLNVQEEEDEFEELIAGDFEEVKESEDEEN 317
           L+A S+PS  NF A+R+DGRL+L+F     + N  +E++   E+   D EE +E E+E+ 
Sbjct: 258 LEAVSMPSHNNFSAKRQDGRLLLTFAEISNEPNYDKEDEIDSEVQWFDEEEEEEEEEEDE 317

Query: 318 DLEAEE--------LEIPMEKTPILSSSVMNFHRLAMMMKKPNGLINRNPAWP------- 377
           + EA +        L   M + PI     +  HRLA    KP G+  RN  WP       
Sbjct: 318 EEEAPDEFAYKPNGLLYKMAQKPI----PITVHRLA---HKPIGVPKRNSRWPMADEFDT 377

Query: 378 -EEKDAPLSQSLP-----------TRPPS-----LAAASLNPYEYYWQSKPTGIKNPIGR 430
             +   P+  SLP           T+PPS     + AA  N  +Y W+S  T    P   
Sbjct: 378 KSDLSTPVVHSLPPRPRVAQLARSTKPPSTVDDTVGAACFNTCDYSWKSTNTESFGP--- 437

[Close]

BLAST of Cp4.1LG05g04450 vs. TAIR10
Match: AT4G02810.1 (AT4G02810.1 Protein of unknown function (DUF3049))

HSP 1 Score: 69.3 bits (168), Expect = 6.5e-12
Identity = 69/189 (36.51%), Postives = 100/189 (52.91%), Query Frame = 1


Query: 113 LFQNSVSDAPKSPVLPYVHPLVKKSTNSLGENSLLICTESLGSESGSDGFSSYS--SSEA 172
           + QN   D  K+    YV+P+ K    S+ + SL +CTESLG+E+GSD     S  + EA
Sbjct: 37  IVQNREDDTKKTA---YVYPIEK---RSVAKLSLEMCTESLGTENGSDSGDEMSLLALEA 96

Query: 173 GDFDGEMMKTEYPFQWKPVKFGRKKTPPRSFPPMISSLTSSDGGSVSIQSRRENGRLILD 232
            +       T      KP K     T   SFPP ++S+   +  S  ++S +E+GRL++ 
Sbjct: 97  TNISKSPRLTT-----KPQKETSFMTRENSFPPPLNSVNGFN-NSRMVKSYKEDGRLVVQ 156

Query: 233 A---CSVPSQKNFRAERRDGRLILSFVTTPAKLNVQEEEDEFEELIAGDFEEVKESEDEE 292
           A   CS P  + F +ERR+GRL L    +   LN Q+ E+EFEE    D  + +E E+EE
Sbjct: 157 AIRVCSPP--RCFVSERREGRLRLCL--SQNSLNSQDAEEEFEEEDEDDQYDAEEEEEEE 209

Query: 293 NDLEAEELE 297
            + E EE E
Sbjct: 217 EEEEEEEEE 209

[Close]

BLAST of Cp4.1LG05g04450 vs. TAIR10
Match: AT1G03170.1 (AT1G03170.1 Protein of unknown function (DUF3049))

HSP 1 Score: 67.4 bits (163), Expect = 2.5e-11
Identity = 64/188 (34.04%), Postives = 91/188 (48.40%), Query Frame = 1


Query: 107 DSWRSILFQNSVSD----APKSPVLPYVHPLVKKSTNSLGENSLLICTESLGSESGSDGF 166
           D    + F  S+SD    A       YVHP+ K+S + L E SL +CTESLG+E+GS+  
Sbjct: 18  DDMGGLSFLQSMSDITSIAQTKEDKAYVHPMEKRSVSKLNEKSLEMCTESLGTETGSESG 77

Query: 167 SSYSSSEAGDFDGEMMKTEYPFQWKPVKFGR--KKTPP----RSFPPMISSLTSSDGGSV 226
              S      F+        P Q KP +      KTPP     SFPP I  +  S    +
Sbjct: 78  DELSLLA---FEATTTPRAPPRQLKPQEDTNLPDKTPPMSRNNSFPPPIKFVEDSKYNRM 137

Query: 227 SIQSRRENGRLILDACSVPSQKN-FRAERRDGRLILSFVTTPAKLNVQEEEDEFEELIAG 284
            ++   E+GR+++ A  V S  + F +ER +GRL L   +  + L+   EE+E EE   G
Sbjct: 138 -VRWLGEDGRIVVQAIRVSSPPSCFVSERGEGRLRLILTSESSLLSHNHEEEEEEETEEG 197

[Close]

BLAST of Cp4.1LG05g04450 vs. TAIR10
Match: AT3G06020.1 (AT3G06020.1 Protein of unknown function (DUF3049))

HSP 1 Score: 64.7 bits (156), Expect = 1.6e-10
Identity = 62/215 (28.84%), Postives = 99/215 (46.05%), Query Frame = 1


Query: 87  SCSVPQDHKNKVESRKQEDLDSWRSI-LFQNSVSDAPKSPVLPYVHPLVKKSTNSLGENS 146
           + S+P    N   S    +  SW  +    NS S+  +   LP        S  +L + S
Sbjct: 56  AASLPSSSPNP-SSNSDTNSGSWSFLESLSNSSSNDKEKKTLPLFQS--PSSRRTLSDES 115

Query: 147 LLICTESLGSESGSDGFSSYSSSEAGDFDGEMMKTEYPFQWKPVKFGRKKTPPRSFPPMI 206
           L +CTESLGSE+GSD       S + +      +T       P +  RK+    S PP +
Sbjct: 116 LALCTESLGSETGSDIIHEDMFSISSELQTMETRTTSTTS-NPSRQDRKRNTMASLPPPL 175

Query: 207 SSLTSSDGGSVSIQSRRENGRLILDACSVPSQKNFRAERRDGRLILSF-------VTTPA 266
           +S+   D   + ++S RENGRL++ A   P +     +R +G + L+        + T  
Sbjct: 176 TSMIGFD--CIEVKSHRENGRLVMMATRPPPRNRCLQDRSNGCVRLAILIDSDDHIETET 235

Query: 267 KLNVQEEEDEFEELIAGDFEEVKESEDEENDLEAE 294
           K   +EEE+E  E +  + EE+ E ++EE + E E
Sbjct: 236 KEEKEEEEEETIETVRDNEEEIPEYKEEEEEKEEE 264

[Close]

BLAST of Cp4.1LG05g04450 vs. TAIR10
Match: AT5G19260.1 (AT5G19260.1 Protein of unknown function (DUF3049))

HSP 1 Score: 54.7 bits (130), Expect = 1.6e-07
Identity = 69/282 (24.47%), Postives = 120/282 (42.55%), Query Frame = 1


Query: 24  TILPSHNTQLPIDPPPSLRRTLSADMSSAKWITRHGSPAISKTASFQALSAAHSSSFEQR 83
           T++     Q  ++ P +LR  LS+          H S           L ++H+     R
Sbjct: 3   TVVYQQGFQSQLNEPRALRLRLSSP-------NPHFSQPFGLALKSHLLDSSHAEDTRNR 62

Query: 84  VGFSCSVPQDHKNKVESRKQEDLDSWRSILFQNSVSDAPKSPVLP-------YVHPLVKK 143
                     + +K  +    D   W S+   +S S +              YV      
Sbjct: 63  ----------NDDKAAASPVSDSSGWSSLQSLSSGSSSSTKTTTSSEKESSYYVQR--PS 122

Query: 144 STNSLGENSLLICTESLGSESGSDGFSSYSSSEAGDFDGEMMKT-EYPFQWKPVKFGRKK 203
           S  +L + SL +CTE+LGSESGSD        E    D +     E   + + +K  ++ 
Sbjct: 123 SCRALSDQSLALCTENLGSESGSD---VTDIDELFSLDVQTKNLGETTTETRTLKSRKRS 182

Query: 204 TPPRSFPPMISSLTSSDGGSVSIQSRRENGRLILDACSVPSQKN-FRAERRDGRLILSFV 263
             P   PP ++++       + ++  RENGRL++ A + P +   F+A+R +GRL LS +
Sbjct: 183 VSPSDLPPPLTTMRGFQ--CIQMRPHRENGRLVMTATNAPPRNGCFQADRSNGRLRLSIL 242

Query: 264 TTPAKLNVQEEEDEFEELIAGDFEEVKESEDEENDLEAEELE 297
               +  V+ EE+  E     ++EE +E E++E++ E   +E
Sbjct: 243 KDSNEF-VENEEETIEPEETEEYEEEEEEEEDEDEDEVMGIE 259

[Close]

BLAST of Cp4.1LG05g04450 vs. NCBI nr
Match: gi|449445011|ref|XP_004140267.1| (PREDICTED: protein FAF-like, chloroplastic [Cucumis sativus])

HSP 1 Score: 465.7 bits (1197), Expect = 8.8e-128
Identity = 285/457 (62.36%), Postives = 328/457 (71.77%), Query Frame = 1


Query: 8   MNSFNHCKSFQKQGILTILPSHNTQLPIDPPPSLRRTLSADMSSAKWITRHGSPAISKTA 67
           M + ++  S QKQGILTILPS +   P  PPPSLRRTLSADMSS KW +      I K  
Sbjct: 1   MKTLHNYNSLQKQGILTILPSSDHHYPSLPPPSLRRTLSADMSSTKWCS-----PIKKIP 60

Query: 68  SFQALSAAHSSSFEQRVGFSCSVPQDHKNKVESRKQEDLDS--WRSILFQNSVSD-APKS 127
           S QA    H +S              + NK++S K    DS  W SIL  NSVSD  PKS
Sbjct: 61  SSQAF---HDNS--------------NNNKIDSSKHGVHDSVPWSSILLHNSVSDDPPKS 120

Query: 128 PVL--PYVHPLVKKSTNSLGENSLLICTESLGSESGSDGFSSYSSSEAGDFDGEMMKTEY 187
           PV+  PYVHPL+KK+++SL + SL ICTESLGSE+GSDGFSSY SSE GDFD  + +T+Y
Sbjct: 121 PVVAAPYVHPLLKKTSHSLSDISLQICTESLGSETGSDGFSSYPSSEDGDFDRLITETDY 180

Query: 188 P----FQWKPVKFGRKKTPPRSFPPMISSLTSSDGGSVSIQSRRENGRLILDACSVPSQK 247
                F+WKPVKF RKK+PPRSFPP ISSL S DG S+ IQSRRE+GRL+LDA SVPS+K
Sbjct: 181 SEIDTFEWKPVKFSRKKSPPRSFPPPISSLDSPDGVSICIQSRREDGRLMLDAVSVPSRK 240

Query: 248 NFRAERRDGRLILSFVTTPAKLNVQEEEDEFEELIAGDFEEVKESE-----DEENDLEAE 307
           NFRAERRDGRLILS   TP  L V EEE E EE+IAG+FEEVKESE     ++EN LE E
Sbjct: 241 NFRAERRDGRLILSLFRTPENLLVNEEE-ELEEMIAGEFEEVKESEIVEVGNDENVLEVE 300

Query: 308 ELEIPMEKTPILSSSVMNFHRLAMMMKKPNGLINRNPAWPEEKDA------PLSQSLPTR 367
           ELEIP+EKTP LSSSVMNFHRL  MMKK NGLINRNPAWP+EKDA      PLSQSLP R
Sbjct: 301 ELEIPIEKTPRLSSSVMNFHRLTNMMKKTNGLINRNPAWPKEKDASETPTTPLSQSLPPR 360

Query: 368 PPSLAAAS----LNPYEYYWQSKPT----GIKNPIGRQENQVI------DNETANEKQQI 427
           PPSL AA+    LN YEYYW+SKPT    GI+NP G+Q+ Q+       +N+ A+EKQQI
Sbjct: 361 PPSLTAATAGTFLNAYEYYWRSKPTGKSAGIQNPNGQQQTQITRKLISSNNQMADEKQQI 420

Query: 428 KVVRGNRGECLVPLSNCCKVPRRSLVLLREHCCIATT 431
            V++GNRG+ LVPLSN CKVPRRS VLLRE CCIATT
Sbjct: 421 LVLKGNRGDYLVPLSNGCKVPRRS-VLLREPCCIATT 433

[Close]

BLAST of Cp4.1LG05g04450 vs. NCBI nr
Match: gi|659097390|ref|XP_008449599.1| (PREDICTED: protein FAF-like, chloroplastic [Cucumis melo])

HSP 1 Score: 458.0 bits (1177), Expect = 1.8e-125
Identity = 282/476 (59.24%), Postives = 324/476 (68.07%), Query Frame = 1


Query: 8   MNSFNHCKSFQKQGILTILPSHNTQLPIDPPPSLRRTLSADMSSAKWITRHGSPAISKTA 67
           M + +   S Q+QGILTILPS +   P  PPPSLRRTLSADMSS KW +      I K  
Sbjct: 1   MKTLHSYNSLQQQGILTILPSSDHHYPSLPPPSLRRTLSADMSSTKWCS-----PIKKIP 60

Query: 68  SFQALSAAHSSSFEQRVGFSCSVPQDHKNKVESRKQ-------------EDLDSWRSILF 127
           S QA                      H NK+E  KQ             +D  SW SIL 
Sbjct: 61  SSQAF---------------------HHNKIECSKQGVVVVDDDDDDDDDDSVSWSSILL 120

Query: 128 QNSVSD-APKSPVL-------PYVHPLVKKSTNSLGENSLLICTESLGSESGSDGFSSYS 187
            NS+SD  PKS V+       PYVHPL+KK+++SL + SL ICTESLGSE+GSDGFSSY 
Sbjct: 121 HNSLSDDPPKSSVVAAPPPPPPYVHPLLKKTSHSLSDISLQICTESLGSETGSDGFSSYP 180

Query: 188 SSEAGDFDGEMMKTEYP-----FQWKPVKFGRKKTPPRSFPPMISSLTSSDGGSVSIQSR 247
           SSE GDFDG M +T+       F+WKPVKF RKK+PPRSFPP+ISSL S DG S+ IQSR
Sbjct: 181 SSEDGDFDGLMTETDCSDDIDTFEWKPVKFSRKKSPPRSFPPLISSLDSPDGVSIGIQSR 240

Query: 248 RENGRLILDACSVPSQKNFRAERRDGRLILSFVTTPAKLNV-QEEEDEFEELIAGDFEEV 307
           R++GRLILDA SVPS+KNFRAERRDGRLILS  TTPA L V +EEE+E EELIAG+FEEV
Sbjct: 241 RKDGRLILDAVSVPSRKNFRAERRDGRLILSLFTTPANLLVKEEEEEELEELIAGEFEEV 300

Query: 308 KESE-----DEENDLEAEELEIPMEKTPILSSSVMNFHRLAMMMKKPNGLINRNPAWPEE 367
           KESE     ++EN LE EELEIP+EKTP LSSSVMNFHRL  MMKK NGLINRNP W  E
Sbjct: 301 KESEIVEVGNDENSLEVEELEIPIEKTPRLSSSVMNFHRLTNMMKKTNGLINRNPTWTNE 360

Query: 368 KD-------APLSQSLPTRPPSLAAAS----LNPYEYYWQSKPT----GIKNPIGRQENQ 427
           KD        PLSQSLP RPPSL AA+    LN YEYYW+SKPT    GI+NP G+Q+ Q
Sbjct: 361 KDGLETPTTTPLSQSLPPRPPSLTAATAGSFLNAYEYYWRSKPTGKSAGIQNPNGQQQTQ 420

Query: 428 VI------DNETANEKQQIKVVRGNRGECLVPLSNCCKVPRRSLVLLREHCCIATT 431
           +       +N+  +EKQQI V++GNRG+ LVPLSN CKVPRRS VLLRE CCIATT
Sbjct: 421 ITRKLISSNNQMTDEKQQILVLKGNRGDYLVPLSNGCKVPRRS-VLLREPCCIATT 449

[Close]

BLAST of Cp4.1LG05g04450 vs. NCBI nr
Match: gi|802562391|ref|XP_012066343.1| (PREDICTED: protein FAF-like, chloroplastic [Jatropha curcas])

HSP 1 Score: 279.3 bits (713), Expect = 1.2e-71
Identity = 209/514 (40.66%), Postives = 283/514 (55.06%), Query Frame = 1


Query: 7   LMNSFNHCKSFQK-------QGILTILPSHNTQLPIDPPPSLRRTLSADMSSAKWITRHG 66
           L  SF+   SF++       QGI++IL S +++L  + P  LRRTLSADMSS KW++++G
Sbjct: 4   LNKSFHSSSSFKEEVMVSKQQGIVSILGS-DSELKTNKP--LRRTLSADMSSKKWLSQNG 63

Query: 67  -SPAISKTASFQALSAA---HSSS-------FEQRVGFSCSVPQDHKNKVESRKQEDLDS 126
            S  + K AS +  S +    SSS       +E+      S+ Q+ K K +S  +   D 
Sbjct: 64  FSSRLKKIASSKEFSVSIITDSSSSEGDEDEYEKETEVWSSIQQE-KQKKDSSPRGQFDI 123

Query: 127 WRSILFQNSVSDAPKSPVLPYVHPLVKKSTNSLGENSLLICTESLGSESGSDGFSSYSSS 186
           W SIL Q +  +A      PYVHPLVK+S +SL E SL ICTESLGSE+GSDGFSSY  S
Sbjct: 124 WSSILTQKA-QEAKNLLPPPYVHPLVKRSASSLSEKSLEICTESLGSETGSDGFSSYPPS 183

Query: 187 EAGDFDG-----------------EMMKTEYPFQ-WKPVKFG----RKKTPPRSFPPMIS 246
           E GD +                  E +   Y  + W+ +K       KK PPR+FPP I 
Sbjct: 184 ETGDAEEDKEEEQQEEEEEEEEEEEKVSKNYDMEDWQVIKCNITAASKKLPPRTFPPPIP 243

Query: 247 SLTSSDGGSVSIQSRRENGRLILDACSVPSQKNFRAERRDGRLILSFVTTPAKLNVQEEE 306
           SL+S DG S+ ++ RR+NGR +L+A SVPSQ NF+AER+DGRL+LSF+ TP       ++
Sbjct: 244 SLSSRDGASLRMRPRRDNGRFVLEAISVPSQNNFKAERQDGRLVLSFIDTPDGEEEGTKK 303

Query: 307 DEFEELIAGDFEEVKESEDEENDL-----EAEELEIPMEKTPILSSSVMNFHRLAMMMKK 366
           +E  EL   + E+ +E E+E N+        EE+   ME+ P LS  ++N HRLA+M+ K
Sbjct: 304 NEM-ELFQVEIEDSEEEEEEVNERGGGGGGGEEMRYVMEQAPKLSGGIINVHRLALMINK 363

Query: 367 PNGLINRNPAW--------------PEEKD------APLSQSLPTRPP------------ 426
           P  L NRN AW               EE++      APL+QSLP RPP            
Sbjct: 364 PTMLANRNTAWSNKFNEVVKFEEEEEEEEEVNPNPIAPLTQSLPPRPPVGRSIPKPAAVA 423

Query: 427 SLAAASLNPYEYYWQSKPTGI------------KNPIGRQENQVIDNETANEK-QQIKVV 431
           + A AS+N YEYYW+ KP G             K+P    +  +  N   NEK Q++ V 
Sbjct: 424 TAATASVNAYEYYWKPKPMGTAGVTACLSPIAKKSPSNNDKYILTKNLIVNEKRQELSVW 483

[Close]

BLAST of Cp4.1LG05g04450 vs. NCBI nr
Match: gi|743902511|ref|XP_011044595.1| (PREDICTED: protein FAF-like, chloroplastic [Populus euphratica])

HSP 1 Score: 266.5 bits (680), Expect = 7.8e-68
Identity = 203/513 (39.57%), Postives = 276/513 (53.80%), Query Frame = 1


Query: 18  QKQGILTILPSHNTQLPIDPPPSLRRTLSADMSSAKWITRHGSPAISKTAS---FQALSA 77
           ++QGI++IL S + +       SLRRTLSADMSS KW  +HG   + K AS   F A + 
Sbjct: 24  KRQGIVSILGS-DVEGNKSAAASLRRTLSADMSSKKWQAQHGFYPLKKIASSDHFPACNI 83

Query: 78  AHSSSFEQ--------------RVGFSCSVPQDHKNKVESRKQEDLDSWRSILFQNSVSD 137
             SSS E               +     S+ +D +NK E  K    D W SIL Q +  D
Sbjct: 84  TDSSSSEDEDYEDRPKATEAQGKFDIWSSIQED-ENKKEVEKPGQFDVWSSILSQKTKED 143

Query: 138 APKSPVLPYVHPLVKKSTNSLGENSLLICTESLGSESGSDGFSSYSSSEAGDFDGEMMKT 197
           +    V PYVHPLVK+S +SL E SL ICTESLGSE+GSDGFSSY  SE GD + +  + 
Sbjct: 144 SKN--VQPYVHPLVKRSASSLSEKSLEICTESLGSETGSDGFSSYPPSETGDAEEDKEEE 203

Query: 198 E------YPFQWKPVKFGR--------KKTPPRSFPPMISSLTSSDGGSVSIQSRRENGR 257
           +        F  + ++  +        KK+ PRSFPP I SL++ DG SV ++SRR+NGR
Sbjct: 204 QRQERVTLKFDTEDLRVAKYNLAAANCKKSQPRSFPPPIPSLSTRDGASVHMKSRRDNGR 263

Query: 258 LILDACSVPSQKNFRAERRDGRLILSFVTTPAKLNVQEEEDEFEELIAGDFE-------E 317
           L+L+A SVPS KNF A+R+DGRL+L+FV T  +   + +++E E+ + G F+       +
Sbjct: 264 LVLEAVSVPSHKNFHAQRQDGRLVLTFVNTVDQDEEERQKNE-EKNVMGQFDFEFENSKD 323

Query: 318 VKESEDEENDLEAEELE------------------IPMEKTPILSSSVMNFHRLAMMMKK 377
            KE E++E ++E EE+E                    ME+ P LSS V   HRLA+MM K
Sbjct: 324 EKECEEDEEEVE-EEIEEDVVEDGENERGGDEGARFVMEEAPKLSSGVTRVHRLALMMDK 383

Query: 378 PNGLINRNPAWPE-----------EKDAPLSQSLPTRPP-------------------SL 431
            +   NRNP WP            E    L+QSLP RPP                   + 
Sbjct: 384 SSVFANRNPTWPHKFNDIAKFGEVEPITSLTQSLPPRPPVARMIPSSPAATMAATEVTAK 443

[Close]

BLAST of Cp4.1LG05g04450 vs. NCBI nr
Match: gi|255545349|ref|XP_002513735.1| (PREDICTED: protein FAF-like, chloroplastic [Ricinus communis])

HSP 1 Score: 260.4 bits (664), Expect = 5.6e-66
Identity = 202/525 (38.48%), Postives = 269/525 (51.24%), Query Frame = 1


Query: 18  QKQGILTILPSHNTQLPIDPPPSLRRTLSADMSSAKWITRHGSPAISKTASFQA--LSAA 77
           +KQGI++IL S   +      PSLRRTLSADMSS KW ++HG   + K AS     +S  
Sbjct: 23  KKQGIVSILGSDYERTK--SAPSLRRTLSADMSSKKWQSQHGFSPLKKIASSGEFPISIT 82

Query: 78  HSSSF-----------EQRVGFSC-SVPQDHKNKVESRKQEDLDSWRSILFQNSVSDAPK 137
            SSS            E R  F   S  Q+ K K +       D W SIL Q +  D   
Sbjct: 83  DSSSSSPSSLEGEYERESRGRFEIWSSIQEEKEKKDQENPGQFDIWSSILTQKAQEDTKT 142

Query: 138 SPVLPYVHPLVKKSTNSLGENSLLICTESLGSESGSDGFSSYSSSEAGDFDGEM------ 197
            P  PYVHPLVK+S +SL E SL ICTESLGSE+GSDGFSSY  SE G+ + +       
Sbjct: 143 LPP-PYVHPLVKRSASSLSEKSLEICTESLGSENGSDGFSSYPPSETGEAEEDKEEEQEQ 202

Query: 198 --------------MKTEYPFQWKPVKFGRKKTPPRSFPPMISSLTSSDGGSVSIQSRRE 257
                         M+  +  ++       KK+ P+SFPP + SL+S DG S+ ++ RR+
Sbjct: 203 EEQEQEERATPKYDMEDLHVAKYNFAASATKKSSPKSFPPPLPSLSSRDGASLRMKPRRD 262

Query: 258 NGRLILDACSVPSQKNFRAERRDGRLILSFVTTPAKLNVQEEEDEFE-ELIAGDFEEVKE 317
           NGRL+L+A SVPSQ NF+A+R+DGRL+L+F  +  K   Q+  + FE E+   + E   E
Sbjct: 263 NGRLVLEAVSVPSQNNFQAQRQDGRLVLTFADSLNK-EGQKGAEMFEIEIENSEDESETE 322

Query: 318 SEDEENDLEAEE--------------LEIPMEKTPILSSSVMNFHRLAMMMKKPNGLINR 377
           +E+EE ++E EE              +   ME+ P LS  V+N HRLA+MM KP  + NR
Sbjct: 323 TEEEEVEMEMEEAANERGRGAGGSGDVRFVMEQAPKLSGGVINVHRLALMMNKPMLISNR 382

Query: 378 NPAWPEEKD---------------APLSQSLPTRPP------------------------ 431
           NP WP + +                PL+QSLP RPP                        
Sbjct: 383 NPTWPNKFNEVQFEEGVEEVVKPITPLTQSLPPRPPVARMIPMPSTAVAAAGTVKAAAAA 442

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g04450 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FAFL_ARATH	3.0e-43	34.25	Protein FAF-like, chloroplastic OS=Arabidopsis thaliana GN=At5g22090 PE=2 SV=1	[more]
FAF1_ARATH	1.1e-10	36.51	Protein FANTASTIC FOUR 1 OS=Arabidopsis thaliana GN=FAF1 PE=2 SV=1	[more]
FAF2_ARATH	4.4e-10	34.04	Protein FANTASTIC FOUR 2 OS=Arabidopsis thaliana GN=FAF2 PE=2 SV=1	[more]
FAF4_ARATH	2.8e-09	28.84	Protein FANTASTIC FOUR 4 OS=Arabidopsis thaliana GN=FAF4 PE=2 SV=1	[more]
FAF3_ARATH	2.9e-06	24.47	Protein FANTASTIC FOUR 3 OS=Arabidopsis thaliana GN=FAF3 PE=2 SV=1	[more]

BLAST of Cp4.1LG05g04450 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI67_CUCSA	6.1e-128	62.36	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G426380 PE=4 SV=1	[more]
A0A067LEM2_JATCU	8.1e-72	40.66	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23902 PE=4 SV=1	[more]
B9RJ16_RICCO	3.9e-66	38.48	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1756120 PE=4 SV=1	[more]
A0A061GTX3_THECC	4.3e-65	40.46	Chaperone DnaJ-domain superfamily protein OS=Theobroma cacao GN=TCM_041220 PE=4 ...	[more]
B9HQ73_POPTR	9.6e-65	38.94	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s02170g PE=4 SV=2	[more]

BLAST of Cp4.1LG05g04450 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22090.1	1.7e-44	34.25	Protein of unknown function (DUF3049)	[more]
AT4G02810.1	6.5e-12	36.51	Protein of unknown function (DUF3049)	[more]
AT1G03170.1	2.5e-11	34.04	Protein of unknown function (DUF3049)	[more]
AT3G06020.1	1.6e-10	28.84	Protein of unknown function (DUF3049)	[more]
AT5G19260.1	1.6e-07	24.47	Protein of unknown function (DUF3049)	[more]

BLAST of Cp4.1LG05g04450 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445011\|ref\|XP_004140267.1\|	8.8e-128	62.36	PREDICTED: protein FAF-like, chloroplastic [Cucumis sativus]	[more]
gi\|659097390\|ref\|XP_008449599.1\|	1.8e-125	59.24	PREDICTED: protein FAF-like, chloroplastic [Cucumis melo]	[more]
gi\|802562391\|ref\|XP_012066343.1\|	1.2e-71	40.66	PREDICTED: protein FAF-like, chloroplastic [Jatropha curcas]	[more]
gi\|743902511\|ref\|XP_011044595.1\|	7.8e-68	39.57	PREDICTED: protein FAF-like, chloroplastic [Populus euphratica]	[more]
gi\|255545349\|ref\|XP_002513735.1\|	5.6e-66	38.48	PREDICTED: protein FAF-like, chloroplastic [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021410	FAF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g04450.1	Cp4.1LG05g04450.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021410	The fantastic four family	PFAM	PF11250	FAF	coord: 200..253 score: 2.9
None	No IPR available	unknown	Coil	Coil	coord: 273..293 scor
None	No IPR available	PANTHER	PTHR33155	FAMILY NOT NAMED	coord: 17..412 score: 1.8
None	No IPR available	PANTHER	PTHR33155:SF3	PROTEIN FAF-LIKE, CHLOROPLASTIC-RELATED	coord: 17..412 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG05g04450	Cucsa.185920	Cucumber (Gy14) v1	cgycpeB0513
Cp4.1LG05g04450	CmaCh20G001450	Cucurbita maxima (Rimu)	cmacpeB586
Cp4.1LG05g04450	CmaCh02G013030	Cucurbita maxima (Rimu)	cmacpeB646
Cp4.1LG05g04450	CmoCh20G001620	Cucurbita moschata (Rifu)	cmocpeB535
Cp4.1LG05g04450	CmoCh02G013440	Cucurbita moschata (Rifu)	cmocpeB595
Cp4.1LG05g04450	CmoCh11G009230	Cucurbita moschata (Rifu)	cmocpeB134
Cp4.1LG05g04450	Cla008617	Watermelon (97103) v1	cpewmB723
Cp4.1LG05g04450	Csa6G426380	Cucumber (Chinese Long) v2	cpecuB742
Cp4.1LG05g04450	MELO3C014521	Melon (DHL92) v3.5.1	cpemeB696
Cp4.1LG05g04450	ClCG02G022450	Watermelon (Charleston Gray)	cpewcgB644
Cp4.1LG05g04450	CSPI06G23440	Wild cucumber (PI 183967)	cpecpiB744
Cp4.1LG05g04450	Lsi10G011350	Bottle gourd (USVL1VR-Ls)	cpelsiB598
Cp4.1LG05g04450	MELO3C014521.2	Melon (DHL92) v3.6.1	cpemedB829
Cp4.1LG05g04450	CsaV3_6G038580	Cucumber (Chinese Long) v3	cpecucB0921
Cp4.1LG05g04450	CsaV3_1G043850	Cucumber (Chinese Long) v3	cpecucB0877
Cp4.1LG05g04450	Bhi10G000149	Wax gourd	cpewgoB0944
Cp4.1LG05g04450	CsGy6G022740	Cucumber (Gy14) v2	cgybcpeB845
Cp4.1LG05g04450	CsGy1G030660	Cucumber (Gy14) v2	cgybcpeB137
Cp4.1LG05g04450	Carg02657	Silver-seed gourd	carcpeB1283
Cp4.1LG05g04450	Carg18409	Silver-seed gourd	carcpeB0583

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG05g04450	Cp4.1LG16g08220	Cucurbita pepo (Zucchini)	cpecpeB310
Cp4.1LG05g04450	Cp4.1LG04g12540	Cucurbita pepo (Zucchini)	cpecpeB493

The following block(s) are covering this gene:

None