Carg18409 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg18409
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein FAF-like, chloroplastic
Location	Cucurbita_argyrosperma_scaffold_161 : 94332 .. 95633 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGACTCTGTTCCATGACTACAAAACCCTTCAAAAACAGGGCATCCTCACCGCTCTACCTTCCTCGGATCTCCAATTCCCCACACTCCCACCGCCTTCCCTGAGAAGAACCCTCTCCGCCGACATGTCCTCCTCCAAGTGCTTCTCCGCCATCAAGAAGGTTGCTTCTTCCCTAGCATTCTCTCTTCCTCCTTATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGAAGACGAACAGGACTGTGACGAAACCATTGGGTTTTGGGGCTCTGTTCATGAAGAACAGAGGAAGAACAGAACAGAGTGTCAAAAACAGGGGAATAATGATGATGATGATGATTCTTGGAAGTCAATTCTGTTTCAGAACTCTGCTCCCAAATCGTCTGTTGTTCCTTATGTTCATCCTCTTCTCCAAAAATCAGCTCACTCTCTCAGTGAAAACAGTCTTCTAATTTGCACTGAGAGTCTTGGATCCGAGACTGGCTCCGATGGCTTCTCTTCCTACCCTTCCTCGGAGTTTGGAGACTTCGACGGAGATACGACGGAAACAGAGTACCCCGACATACAGACATTTCAATGGAAGCCCATCAAATTCGGTCGCAAGAAATCGCCGCCGAGGTCTTTTCCCCCGCCGATTTCTTCTCTCTGTTCTCCCGACGGCGCCTCCGTCTGCATTCAGTCCCGCCGGGAAAATGGGCGGTTAATTCTCGACGCCGTCTCTGTTCCCTCAAAGAAGAATTTCCGCGCCGATCGCCGAGATGGCCGTCTCGTTCTCTCTTTTGTTACAACTCCGGCGAATTTATTGGTTAAAGAATGGAAAATTGTCGAAGAGAGAGACGATTTGGAAGCCGACGAATCGGAAATCCCGATGGATGAGGTTGCGAGATTGTCGAGCTCTGTTATGAACTTCCATCGATTAGCAATGATGATGAAGAAGCCAAATGGATTCATCAATCGGAATCCGGCATGGCCAAAGGAAAAAGATGCTCCAGAGCCACTAACCCCACTATCACAGTCACTTCCACCGCGTCCTCGGTCGCTCACGGCGGCGACAGCAGCGACTTCTCTGAATGCATACGAGTACTACTGGCGATCGAAACCAACCGGAATTCAAAACCTAAAGAGCCAACAACAAATTCAACCCATCCAGAGCATAACCCGCAAATTTATATCTTCAAACAATCAAATGGCGGATGAGAAACAGCAAATTCTAAACTATTTGGTTCCATTGTCGAATGGATGTAAAGTTCCCAGAAGGTCTGTTCTTCTCCGGGAGCCCTGCTGCATTGCCACCACCTAA

mRNA sequence

ATGAAGACTCTGTTCCATGACTACAAAACCCTTCAAAAACAGGGCATCCTCACCGCTCTACCTTCCTCGGATCTCCAATTCCCCACACTCCCACCGCCTTCCCTGAGAAGAACCCTCTCCGCCGACATGTCCTCCTCCAAGTGCTTCTCCGCCATCAAGAAGGTTGCTTCTTCCCTAGCATTCTCTCTTCCTCCTTATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGAAGACGAACAGGACTGTGACGAAACCATTGGGTTTTGGGGCTCTGTTCATGAAGAACAGAGGAAGAACAGAACAGAGTGTCAAAAACAGGGGAATAATGATGATGATGATGATTCTTGGAAGTCAATTCTGTTTCAGAACTCTGCTCCCAAATCGTCTGTTGTTCCTTATGTTCATCCTCTTCTCCAAAAATCAGCTCACTCTCTCAGTGAAAACAGTCTTCTAATTTGCACTGAGAGTCTTGGATCCGAGACTGGCTCCGATGGCTTCTCTTCCTACCCTTCCTCGGAGTTTGGAGACTTCGACGGAGATACGACGGAAACAGAGTACCCCGACATACAGACATTTCAATGGAAGCCCATCAAATTCGGTCGCAAGAAATCGCCGCCGAGGTCTTTTCCCCCGCCGATTTCTTCTCTCTGTTCTCCCGACGGCGCCTCCGTCTGCATTCAGTCCCGCCGGGAAAATGGGCGGTTAATTCTCGACGCCGTCTCTGTTCCCTCAAAGAAGAATTTCCGCGCCGATCGCCGAGATGGCCGTCTCGTTCTCTCTTTTGTTACAACTCCGGCGAATTTATTGGTTAAAGAATGGAAAATTGTCGAAGAGAGAGACGATTTGGAAGCCGACGAATCGGAAATCCCGATGGATGAGGTTGCGAGATTGTCGAGCTCTGTTATGAACTTCCATCGATTAGCAATGATGATGAAGAAGCCAAATGGATTCATCAATCGGAATCCGGCATGGCCAAAGGAAAAAGATGCTCCAGAGCCACTAACCCCACTATCACAGTCACTTCCACCGCGTCCTCGGTCGCTCACGGCGGCGACAGCAGCGACTTCTCTGAATGCATACGAGTACTACTGGCGATCGAAACCAACCGGAATTCAAAACCTAAAGAGCCAACAACAAATTCAACCCATCCAGAGCATAACCCGCAAATTTATATCTTCAAACAATCAAATGGCGGATGAGAAACAGCAAATTCTAAACTATTTGGTTCCATTGTCGAATGGATGTAAAGTTCCCAGAAGGTCTGTTCTTCTCCGGGAGCCCTGCTGCATTGCCACCACCTAA

Coding sequence (CDS)

ATGAAGACTCTGTTCCATGACTACAAAACCCTTCAAAAACAGGGCATCCTCACCGCTCTACCTTCCTCGGATCTCCAATTCCCCACACTCCCACCGCCTTCCCTGAGAAGAACCCTCTCCGCCGACATGTCCTCCTCCAAGTGCTTCTCCGCCATCAAGAAGGTTGCTTCTTCCCTAGCATTCTCTCTTCCTCCTTATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGAAGACGAACAGGACTGTGACGAAACCATTGGGTTTTGGGGCTCTGTTCATGAAGAACAGAGGAAGAACAGAACAGAGTGTCAAAAACAGGGGAATAATGATGATGATGATGATTCTTGGAAGTCAATTCTGTTTCAGAACTCTGCTCCCAAATCGTCTGTTGTTCCTTATGTTCATCCTCTTCTCCAAAAATCAGCTCACTCTCTCAGTGAAAACAGTCTTCTAATTTGCACTGAGAGTCTTGGATCCGAGACTGGCTCCGATGGCTTCTCTTCCTACCCTTCCTCGGAGTTTGGAGACTTCGACGGAGATACGACGGAAACAGAGTACCCCGACATACAGACATTTCAATGGAAGCCCATCAAATTCGGTCGCAAGAAATCGCCGCCGAGGTCTTTTCCCCCGCCGATTTCTTCTCTCTGTTCTCCCGACGGCGCCTCCGTCTGCATTCAGTCCCGCCGGGAAAATGGGCGGTTAATTCTCGACGCCGTCTCTGTTCCCTCAAAGAAGAATTTCCGCGCCGATCGCCGAGATGGCCGTCTCGTTCTCTCTTTTGTTACAACTCCGGCGAATTTATTGGTTAAAGAATGGAAAATTGTCGAAGAGAGAGACGATTTGGAAGCCGACGAATCGGAAATCCCGATGGATGAGGTTGCGAGATTGTCGAGCTCTGTTATGAACTTCCATCGATTAGCAATGATGATGAAGAAGCCAAATGGATTCATCAATCGGAATCCGGCATGGCCAAAGGAAAAAGATGCTCCAGAGCCACTAACCCCACTATCACAGTCACTTCCACCGCGTCCTCGGTCGCTCACGGCGGCGACAGCAGCGACTTCTCTGAATGCATACGAGTACTACTGGCGATCGAAACCAACCGGAATTCAAAACCTAAAGAGCCAACAACAAATTCAACCCATCCAGAGCATAACCCGCAAATTTATATCTTCAAACAATCAAATGGCGGATGAGAAACAGCAAATTCTAAACTATTTGGTTCCATTGTCGAATGGATGTAAAGTTCCCAGAAGGTCTGTTCTTCTCCGGGAGCCCTGCTGCATTGCCACCACCTAA

Protein sequence

MKTLFHDYKTLQKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKCFSAIKKVASSLAFSLPPYSSSSSSSSSSEDEQDCDETIGFWGSVHEEQRKNRTECQKQGNNDDDDDSWKSILFQNSAPKSSVVPYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGDTTETEYPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGASVCIQSRRENGRLILDAVSVPSKKNFRADRRDGRLVLSFVTTPANLLVKEWKIVEERDDLEADESEIPMDEVARLSSSVMNFHRLAMMMKKPNGFINRNPAWPKEKDAPEPLTPLSQSLPPRPRSLTAATAATSLNAYEYYWRSKPTGIQNLKSQQQIQPIQSITRKFISSNNQMADEKQQILNYLVPLSNGCKVPRRSVLLREPCCIATT

Homology

[Close]

BLAST of Carg18409 vs. NCBI nr
Match: XP_023513350.1 (protein FAF-like, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 659.1 bits (1699), Expect = 1.1e-185
Identity = 386/437 (88.33%), Postives = 388/437 (88.79%), Query Frame = 0


Query: 1   MKTLFHDYKTLQKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKCFSAIKKVASSLA 60
           MKTLFHDY+TLQKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKCFSAIKKVASSLA
Sbjct: 62  MKTLFHDYQTLQKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKCFSAIKKVASSLA 121

Query: 61  FSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKSIL 120
           FSL      XXXXXXXXXXXXXX                           XXX  WKSIL
Sbjct: 122 FSL--TPYSXXXXXXXXXXXXXXDETIGFWGSVHEEQRKNRTECQKQGNNXXXDSWKSIL 181

Query: 121 FQNSAPKSSVVPYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGD 180
           FQNSAPKS V PYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGD
Sbjct: 182 FQNSAPKSPVFPYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGD 241

Query: 181 TTETEYPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGASVCIQSRRENGRLILDAV 240
           TTETEYPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGASVCIQSRRENGRLILDAV
Sbjct: 242 TTETEYPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGASVCIQSRRENGRLILDAV 301

Query: 241 SVPSKKNFRADXXXXXXXXXXXXXXANLLVKEWKIVEERDDLEADESEIPMDEVARLSSS 300
           SVPSKKNFRADXXXXXXXXXXXXXXANLLVKE KIVEERDDLEADESEIPMDEVARLSSS
Sbjct: 302 SVPSKKNFRADXXXXXXXXXXXXXXANLLVKESKIVEERDDLEADESEIPMDEVARLSSS 361

Query: 301 VMNFHRLAMMMKKPNGFINRNPAWPKEKDAPEPLTPLSQSLPPRPRSLTAATAATSLNAY 360
           VMNFHRLAMMMKKPNGFINRNPAWPK KD PE LTPLSQSLPPRP SLTAA   TSLNAY
Sbjct: 362 VMNFHRLAMMMKKPNGFINRNPAWPKSKDVPEALTPLSQSLPPRPPSLTAAXXXTSLNAY 421

Query: 361 EYYWRSKPT----GIQNLKSQQQIQPIQSITRKFISSNNQMADEKQQILNYLVPLSNGCK 420
           EYYWRSKPT    GIQNLKSQQQIQPIQSITRKFISSNNQ+ADEKQQILNYLVPLSNGCK
Sbjct: 422 EYYWRSKPTGKSAGIQNLKSQQQIQPIQSITRKFISSNNQVADEKQQILNYLVPLSNGCK 481

Query: 421 VPRRSVLLREPCCIATT 434
           VPRRSVLLREPCCIATT
Sbjct: 482 VPRRSVLLREPCCIATT 496

[Close]

BLAST of Carg18409 vs. NCBI nr
Match: XP_022986115.1 (protein FAF-like, chloroplastic [Cucurbita maxima])

HSP 1 Score: 652.5 bits (1682), Expect = 9.9e-184
Identity = 414/439 (94.31%), Postives = 420/439 (95.67%), Query Frame = 0


Query: 1   MKTLFHDYKTLQKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKCFSAIKKVASSLA 60
           MKTLFHDYKTLQKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKCFSAIK+VASSLA
Sbjct: 1   MKTLFHDYKTLQKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKCFSAIKRVASSLA 60

Query: 61  FSLP--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKS 120
           FSLP  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX W S
Sbjct: 61  FSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWNS 120

Query: 121 ILFQNSAPKSSVVPYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFD 180
           ILFQNSAPKS VVPYVHP LQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFD
Sbjct: 121 ILFQNSAPKSPVVPYVHPHLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFD 180

Query: 181 GDTTETEYPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGASVCIQSRRENGRLILD 240
           GDTTET+YPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGASVCIQSRRENGRLILD
Sbjct: 181 GDTTETDYPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGASVCIQSRRENGRLILD 240

Query: 241 AVSVPSKKNFRADXXXXXXXXXXXXXXANLLVKEWKIVEERDDLEADESEIPMDEVARLS 300
           AVSVPSKKNFRADXXXXXXXXXXXXXXANLLV+E KIVEERDDLEADESEIPMDEVARLS
Sbjct: 241 AVSVPSKKNFRADXXXXXXXXXXXXXXANLLVEESKIVEERDDLEADESEIPMDEVARLS 300

Query: 301 SSVMNFHRLAMMMKKPNGFINRNPAWPKEKDAPEPLTPLSQSLPPRPRSLTAATAATSLN 360
           SSVMNFHRLAMMMKKPNGFINRNPAWPK+KD+PE LTPLSQSLPPRP SLT      SLN
Sbjct: 301 SSVMNFHRLAMMMKKPNGFINRNPAWPKQKDSPEALTPLSQSLPPRPPSLTXXXXXXSLN 360

Query: 361 AYEYYWRSKPT----GIQNLKSQQQIQPIQSITRKFISSNNQMADEKQQILNYLVPLSNG 420
           AYEYYWRSKPT    GIQNLKSQQQIQPIQSITRKFISSNNQMADEKQQILNYLVPLSNG
Sbjct: 361 AYEYYWRSKPTGKSAGIQNLKSQQQIQPIQSITRKFISSNNQMADEKQQILNYLVPLSNG 420

Query: 421 CKVPRRSVLLREPCCIATT 434
           CK+PRRSVLLREPCCIATT
Sbjct: 421 CKIPRRSVLLREPCCIATT 439

[Close]

BLAST of Carg18409 vs. NCBI nr
Match: XP_022944670.1 (protein FAF-like, chloroplastic [Cucurbita moschata])

HSP 1 Score: 644.8 bits (1662), Expect = 2.1e-181
Identity = 371/433 (85.68%), Postives = 373/433 (86.14%), Query Frame = 0


Query: 1   MKTLFHDYKTLQKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKCFSAIKKVASSLA 60
           MKTLFHDYKTLQKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKCFSAIKKVASSLA
Sbjct: 1   MKTLFHDYKTLQKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKCFSAIKKVASSLA 60

Query: 61  FSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKSIL 120
           FSLP                                        XXXXXXXXXXXWKSIL
Sbjct: 61  FSLP------PYSSSSEDEQDCDETIGFWSSVHEEQRKNRTECQXXXXXXXXXXXWKSIL 120

Query: 121 FQNSAPKSSVVPYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGD 180
           FQNSAPKSSVVPYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGD
Sbjct: 121 FQNSAPKSSVVPYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGD 180

Query: 181 TTETEYPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGASVCIQSRRENGRLILDAV 240
           TTETEYPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGASVCIQSRRENGRLILDAV
Sbjct: 181 TTETEYPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGASVCIQSRRENGRLILDAV 240

Query: 241 SVPSKKNFRADXXXXXXXXXXXXXXANLLVKEWKIVEERDDLEADESEIPMDEVARLSSS 300
           SVPSKKNFRADXXXXXXXXXXXXXX NLL+KE KIVEERDDLEAD+SEIPMDEVARLSSS
Sbjct: 241 SVPSKKNFRADXXXXXXXXXXXXXXXNLLIKESKIVEERDDLEADDSEIPMDEVARLSSS 300

Query: 301 VMNFHRLAMMMKKPNGFINRNPAWPKEKDAPEPLTPLSQSLPPRPRSLTAATAATSLNAY 360
           VMNFHRLAMMMKKPNGFINRNPAWPKEKDAPEPLTPLSQSL                 AY
Sbjct: 301 VMNFHRLAMMMKKPNGFINRNPAWPKEKDAPEPLTPLSQSLXXXXXXXXXXXXXXXXXAY 360

Query: 361 EYYWRSKPTGIQNLKSQQQIQPIQSITRKFISSNNQMADEKQQILNYLVPLSNGCKVPRR 420
           EYYWRSKPTGIQNLKSQQQIQPIQSIT KFISSNNQMADEKQQILNYLVPLSNGCKVPRR
Sbjct: 361 EYYWRSKPTGIQNLKSQQQIQPIQSITCKFISSNNQMADEKQQILNYLVPLSNGCKVPRR 420

Query: 421 SVLLREPCCIATT 434
           SVLLREPCCIATT
Sbjct: 421 SVLLREPCCIATT 427

[Close]

BLAST of Carg18409 vs. NCBI nr
Match: XP_004140267.1 (PREDICTED: protein FAF-like, chloroplastic [Cucumis sativus] >KGN48052.1 hypothetical protein Csa_6G426380 [Cucumis sativus])

HSP 1 Score: 474.6 bits (1220), Expect = 3.7e-130
Identity = 297/471 (63.06%), Postives = 323/471 (68.58%), Query Frame = 0


Query: 1   MKTLFHDYKTLQKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKCFSAIKKVASSLA 60
           MKTL H+Y +LQKQGILT LPSSD  +P+LPPPSLRRTLSADMSS+K  S IKK+ SS A
Sbjct: 1   MKTL-HNYNSLQKQGILTILPSSDHHYPSLPPPSLRRTLSADMSSTKWCSPIKKIPSSQA 60

Query: 61  FSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKSIL 120
           F                                                      W SIL
Sbjct: 61  F---------------------------------HDNSNNNKIDSSKHGVHDSVPWSSIL 120

Query: 121 FQNSA----PKSSVV--PYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEF 180
             NS     PKS VV  PYVHPLL+K++HSLS+ SL ICTESLGSETGSDGFSSYPSSE 
Sbjct: 121 LHNSVSDDPPKSPVVAAPYVHPLLKKTSHSLSDISLQICTESLGSETGSDGFSSYPSSED 180

Query: 181 GDFDGDTTETEYPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGASVCIQSRRENGR 240
           GDFD   TET+Y +I TF+WKP+KF RKKSPPRSFPPPISSL SPDG S+CIQSRRE+GR
Sbjct: 181 GDFDRLITETDYSEIDTFEWKPVKFSRKKSPPRSFPPPISSLDSPDGVSICIQSRREDGR 240

Query: 241 LILDAVSVPSKKNFRADXXXXXXXXXXXXXXANLL-----------------VKEWKIVE 300
           L+LDAVSVPS+KNFRA+XXXXXXXXXX     NLL                 VKE +IVE
Sbjct: 241 LMLDAVSVPSRKNFRAEXXXXXXXXXXFRTPENLLVNEEEELEEMIAGEFEEVKESEIVE 300

Query: 301 ERDD---LEADESEIPMDEVARLSSSVMNFHRLAMMMKKPNGFINRNPAWPKEKDAPE-P 360
             +D   LE +E EIP+++  RLSSSVMNFHRL  MMKK NG INRNPAWPKEKDA E P
Sbjct: 301 VGNDENVLEVEELEIPIEKTPRLSSSVMNFHRLTNMMKKTNGLINRNPAWPKEKDASETP 360

Query: 361 LTPLSQSLPPRPRSLTAATAATSLNAYEYYWRSKPT----GIQNLKSQQQIQPIQSITRK 420
            TPLSQSLPPRP SLTAATA T LNAYEYYWRSKPT    GIQN   QQQ Q    ITRK
Sbjct: 361 TTPLSQSLPPRPPSLTAATAGTFLNAYEYYWRSKPTGKSAGIQNPNGQQQTQ----ITRK 420

Query: 421 FISSNNQMADEKQQIL-------NYLVPLSNGCKVPRRSVLLREPCCIATT 434
            ISSNNQMADEKQQIL       +YLVPLSNGCKVPRRSVLLREPCCIATT
Sbjct: 421 LISSNNQMADEKQQILVLKGNRGDYLVPLSNGCKVPRRSVLLREPCCIATT 433

[Close]

BLAST of Carg18409 vs. NCBI nr
Match: XP_008449599.1 (PREDICTED: protein FAF-like, chloroplastic [Cucumis melo])

HSP 1 Score: 412.9 bits (1060), Expect = 1.3e-111
Identity = 303/469 (64.61%), Postives = 329/469 (70.15%), Query Frame = 0


Query: 1   MKTLFHDYKTLQKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKCFSAIKKVASSLA 60
           MKTL H Y +LQ+QGILT LPSSD  +P+LPPPSLRRTLSADMSS+K  S IKK+ SS A
Sbjct: 1   MKTL-HSYNSLQQQGILTILPSSDHHYPSLPPPSLRRTLSADMSSTKWCSPIKKIPSSQA 60

Query: 61  FSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKSIL 120
           F                          XXXXXXXXXXXXXXXXXXXXXXXXXXXX     
Sbjct: 61  F---------------HHNKIECSKQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 FQNSAPKSSVVPYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGD 180
                        VHPLL+K++HSLS+ SL ICTESLGSETGSDGFSSYPSSE GDFDG 
Sbjct: 121 XXXXXXXXXXXXXVHPLLKKTSHSLSDISLQICTESLGSETGSDGFSSYPSSEDGDFDGL 180

Query: 181 TTETE-YPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGASVCIQSRRENGRLILDA 240
            TET+   DI TF+WKP+KF RKKSPPRSFPP ISSL SPDG S+ IQSRR++GRLILDA
Sbjct: 181 MTETDCSDDIDTFEWKPVKFSRKKSPPRSFPPLISSLDSPDGVSIGIQSRRKDGRLILDA 240

Query: 241 VSVPSKKNFRADXXXXXXXXXXXXXXANLL-------------------VKEWKIVE--- 300
           VSVPS+KNF   XXXXXXXXXXXXXX  LL                   VKE +IVE   
Sbjct: 241 VSVPSRKNFXXXXXXXXXXXXXXXXXXXLLVKXXXXEELEELIAGEFEEVKESEIVEVGN 300

Query: 301 ERDDLEADESEIPMDEVARLSSSVMNFHRLAMMMKKPNGFINRNPAWPKEKDAPE--PLT 360
           + + LE +E EIP+++  RLSSSVMNFHRL  MMKK NG INRNP W  EKD  E    T
Sbjct: 301 DENSLEVEELEIPIEKTPRLSSSVMNFHRLTNMMKKTNGLINRNPTWTNEKDGLETPTTT 360

Query: 361 PLSQSLPPRPRSLTAATAATSLNAYEYYWRSKPT----GIQNLKSQQQIQPIQSITRKFI 420
           PLSQSLPPRP SLTAATA + LNAYEYYWRSKPT    GIQN   QQQ Q    ITRK I
Sbjct: 361 PLSQSLPPRPPSLTAATAGSFLNAYEYYWRSKPTGKSAGIQNPNGQQQTQ----ITRKLI 420

Query: 421 SSNNQMADEKQQIL-------NYLVPLSNGCKVPRRSVLLREPCCIATT 434
           SSNNQM DEKQQIL       +YLVPLSNGCKVPRRSVLLREPCCIATT
Sbjct: 421 SSNNQMTDEKQQILVLKGNRGDYLVPLSNGCKVPRRSVLLREPCCIATT 449

[Close]

BLAST of Carg18409 vs. TAIR10
Match: AT5G22090.1 (Protein of unknown function (DUF3049))

HSP 1 Score: 122.1 bits (305), Expect = 8.5e-28
Identity = 126/364 (34.62%), Postives = 159/364 (43.68%), Query Frame = 0


Query: 132 PYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFD----------GDT 191
           PYVHPL+ K A SLSE SL ICTESLGSETG DGFSS+ SSE GD +           + 
Sbjct: 132 PYVHPLM-KRASSLSEKSLEICTESLGSETGCDGFSSHASSETGDAEIEIHDETNLVVNV 191

Query: 192 TETEYPDIQTFQWKPIKFGRK-------KSPPRSFPPPISSLCSPDGASVCIQSRRENGR 251
           TET+                        + PP SFPPPI SL S  G+S+ +++RR+NGR
Sbjct: 192 TETKVEXXXXXXXXXXXXXXXXXPNHIIELPPGSFPPPIRSLSSQSGSSLHMKTRRDNGR 251

Query: 252 LILDAVSVPSKKNFRADXXXXXXXXXXXXXXANLLVKEWKIVEERDDLEADE--SEI--- 311
           L+L+AVS+PS  NF A                 LL+   +I  E +  + DE  SE+   
Sbjct: 252 LVLEAVSMPSHNNFSA-----------KRQDGRLLLTFAEISNEPNYDKEDEIDSEVQWF 311

Query: 312 ----------------PMDEVARLSSSVM----------NFHRLAMMMKKPNGFINRNPA 371
                             DE A   + ++            HRLA    KP G   RN  
Sbjct: 312 DXXXXXXXXXXXXXXXXXDEFAYKPNGLLYKMAQKPIPITVHRLA---HKPIGVPKRNSR 371

Query: 372 WP--KEKDAPEPL-TPLSQSLPPRPR------------SLTAATAATSLNAYEYYWRSKP 431
           WP   E D    L TP+  SLPPRPR            ++     A   N  +Y W+S  
Sbjct: 372 WPMADEFDTKSDLSTPVVHSLPPRPRVAQLARSTKPPSTVDDTVGAACFNTCDYSWKSTN 431

Query: 432 TGIQNLKSQQQIQPIQSITRKFISSNNQMADEKQQILNYLVPLSNGCKVPRRSVLLREPC 433
           T      ++ Q Q      + F+  N  M D             NGCK  RRS+L  EP 
Sbjct: 432 TESFGPNTKTQFQ-----AQNFV--NKSMGD----------GWINGCKDRRRSLLSVEPF 463

[Close]

BLAST of Carg18409 vs. TAIR10
Match: AT5G19260.1 (Protein of unknown function (DUF3049))

HSP 1 Score: 53.5 bits (127), Expect = 3.7e-07
Identity = 37/114 (32.46%), Postives = 61/114 (53.51%), Query Frame = 0


Query: 141 SAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGDTTETEYPDIQTFQWKPIKFG 200
           S  +LS+ SL +CTE+LGSE+GSD       ++  +      +T+     T + + +K  
Sbjct: 104 SCRALSDQSLALCTENLGSESGSD------VTDIDELFSLDVQTKNLGETTTETRTLKSR 163

Query: 201 RKKSPPRSFPPPISSLCSPDGASVCIQSR--RENGRLILDAVSVPSKKN-FRAD 252
           ++   P   PPP++++        CIQ R  RENGRL++ A + P +   F+AD
Sbjct: 164 KRSVSPSDLPPPLTTM----RGFQCIQMRPHRENGRLVMTATNAPPRNGCFQAD 207

[Close]

BLAST of Carg18409 vs. TAIR10
Match: AT1G03170.1 (Protein of unknown function (DUF3049))

HSP 1 Score: 50.1 bits (118), Expect = 4.1e-06
Identity = 42/118 (35.59%), Postives = 60/118 (50.85%), Query Frame = 0


Query: 133 YVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGDTTETEYPDIQTF 192
           YVHP+ ++S   L+E SL +CTESLG+ETGS+   S        F+  TT    P     
Sbjct: 44  YVHPMEKRSVSKLNEKSLEMCTESLGTETGSE---SGDELSLLAFEATTT----PRAPPR 103

Query: 193 QWKPIKFGR--KKSPP----RSFPPPISSLCSPDGASVCIQSRRENGRLILDAVSVPS 245
           Q KP +      K+PP     SFPPPI         +  ++   E+GR+++ A+ V S
Sbjct: 104 QLKPQEDTNLPDKTPPMSRNNSFPPPI-KFVEDSKYNRMVRWLGEDGRIVVQAIRVSS 153

[Close]

BLAST of Carg18409 vs. TAIR10
Match: AT3G06020.1 (Protein of unknown function (DUF3049))

HSP 1 Score: 49.3 bits (116), Expect = 7.0e-06
Identity = 39/118 (33.05%), Postives = 55/118 (46.61%), Query Frame = 0


Query: 136 PLLQ--KSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGDTTETEYPDIQTFQ 195
           PL Q   S  +LS+ SL +CTESLGSETGSD       S   +      +T         
Sbjct: 97  PLFQSPSSRRTLSDESLALCTESLGSETGSDIIHEDMFSISSEL-----QTXXXXXXXXX 156

Query: 196 WKPIKFGRKKSPPRSFPPPISSLCSPDGASVCIQSRRENGRLILDAVSVPSKKNFRAD 252
                   K++   S PPP++S+   D   + ++S RENGRL++ A   P +     D
Sbjct: 157 XXXXXXXXKRNTMASLPPPLTSMIGFD--CIEVKSHRENGRLVMMATRPPPRNRCLQD 207

[Close]

BLAST of Carg18409 vs. TAIR10
Match: AT4G02810.1 (Protein of unknown function (DUF3049))

HSP 1 Score: 47.8 bits (112), Expect = 2.0e-05
Identity = 39/126 (30.95%), Postives = 67/126 (53.17%), Query Frame = 0


Query: 120 LFQNSAPKSSVVPYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDG 179
           + QN    +    YV+P+ ++S   L   SL +CTESLG+E GSD        E      
Sbjct: 37  IVQNREDDTKKTAYVYPIEKRSVAKL---SLEMCTESLGTENGSDS-----GDEMSLLAL 96

Query: 180 DTTE-TEYPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGASVCIQSRRENGRLILD 239
           + T  ++ P + T   K   F  +++   SFPPP++S+   + + + ++S +E+GRL++ 
Sbjct: 97  EATNISKSPRLTTKPQKETSFMTREN---SFPPPLNSVNGFNNSRM-VKSYKEDGRLVVQ 150

Query: 240 AVSVPS 245
           A+ V S
Sbjct: 157 AIRVCS 150

[Close]

BLAST of Carg18409 vs. Swiss-Prot
Match: sp|Q0V865|FAFL_ARATH (Protein FAF-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g22090 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.5e-26
Identity = 126/364 (34.62%), Postives = 159/364 (43.68%), Query Frame = 0


Query: 132 PYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFD----------GDT 191
           PYVHPL+ K A SLSE SL ICTESLGSETG DGFSS+ SSE GD +           + 
Sbjct: 132 PYVHPLM-KRASSLSEKSLEICTESLGSETGCDGFSSHASSETGDAEIEIHDETNLVVNV 191

Query: 192 TETEYPDIQTFQWKPIKFGRK-------KSPPRSFPPPISSLCSPDGASVCIQSRRENGR 251
           TET+                        + PP SFPPPI SL S  G+S+ +++RR+NGR
Sbjct: 192 TETKVEXXXXXXXXXXXXXXXXXPNHIIELPPGSFPPPIRSLSSQSGSSLHMKTRRDNGR 251

Query: 252 LILDAVSVPSKKNFRADXXXXXXXXXXXXXXANLLVKEWKIVEERDDLEADE--SEI--- 311
           L+L+AVS+PS  NF A                 LL+   +I  E +  + DE  SE+   
Sbjct: 252 LVLEAVSMPSHNNFSA-----------KRQDGRLLLTFAEISNEPNYDKEDEIDSEVQWF 311

Query: 312 ----------------PMDEVARLSSSVM----------NFHRLAMMMKKPNGFINRNPA 371
                             DE A   + ++            HRLA    KP G   RN  
Sbjct: 312 DXXXXXXXXXXXXXXXXXDEFAYKPNGLLYKMAQKPIPITVHRLA---HKPIGVPKRNSR 371

Query: 372 WP--KEKDAPEPL-TPLSQSLPPRPR------------SLTAATAATSLNAYEYYWRSKP 431
           WP   E D    L TP+  SLPPRPR            ++     A   N  +Y W+S  
Sbjct: 372 WPMADEFDTKSDLSTPVVHSLPPRPRVAQLARSTKPPSTVDDTVGAACFNTCDYSWKSTN 431

Query: 432 TGIQNLKSQQQIQPIQSITRKFISSNNQMADEKQQILNYLVPLSNGCKVPRRSVLLREPC 433
           T      ++ Q Q      + F+  N  M D             NGCK  RRS+L  EP 
Sbjct: 432 TESFGPNTKTQFQ-----AQNFV--NKSMGD----------GWINGCKDRRRSLLSVEPF 463

[Close]

BLAST of Carg18409 vs. Swiss-Prot
Match: sp|Q6NMR8|FAF3_ARATH (Protein FANTASTIC FOUR 3 OS=Arabidopsis thaliana OX=3702 GN=FAF3 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 6.7e-06
Identity = 37/114 (32.46%), Postives = 61/114 (53.51%), Query Frame = 0


Query: 141 SAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGDTTETEYPDIQTFQWKPIKFG 200
           S  +LS+ SL +CTE+LGSE+GSD       ++  +      +T+     T + + +K  
Sbjct: 104 SCRALSDQSLALCTENLGSESGSD------VTDIDELFSLDVQTKNLGETTTETRTLKSR 163

Query: 201 RKKSPPRSFPPPISSLCSPDGASVCIQSR--RENGRLILDAVSVPSKKN-FRAD 252
           ++   P   PPP++++        CIQ R  RENGRL++ A + P +   F+AD
Sbjct: 164 KRSVSPSDLPPPLTTM----RGFQCIQMRPHRENGRLVMTATNAPPRNGCFQAD 207

[Close]

BLAST of Carg18409 vs. Swiss-Prot
Match: sp|Q8GXU9|FAF2_ARATH (Protein FANTASTIC FOUR 2 OS=Arabidopsis thaliana OX=3702 GN=FAF2 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 7.4e-05
Identity = 42/118 (35.59%), Postives = 60/118 (50.85%), Query Frame = 0


Query: 133 YVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGDTTETEYPDIQTF 192
           YVHP+ ++S   L+E SL +CTESLG+ETGS+   S        F+  TT    P     
Sbjct: 44  YVHPMEKRSVSKLNEKSLEMCTESLGTETGSE---SGDELSLLAFEATTT----PRAPPR 103

Query: 193 QWKPIKFGR--KKSPP----RSFPPPISSLCSPDGASVCIQSRRENGRLILDAVSVPS 245
           Q KP +      K+PP     SFPPPI         +  ++   E+GR+++ A+ V S
Sbjct: 104 QLKPQEDTNLPDKTPPMSRNNSFPPPI-KFVEDSKYNRMVRWLGEDGRIVVQAIRVSS 153

[Close]

BLAST of Carg18409 vs. Swiss-Prot
Match: sp|Q9SFG6|FAF4_ARATH (Protein FANTASTIC FOUR 4 OS=Arabidopsis thaliana OX=3702 GN=FAF4 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.3e-04
Identity = 39/118 (33.05%), Postives = 55/118 (46.61%), Query Frame = 0


Query: 136 PLLQ--KSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGDTTETEYPDIQTFQ 195
           PL Q   S  +LS+ SL +CTESLGSETGSD       S   +      +T         
Sbjct: 97  PLFQSPSSRRTLSDESLALCTESLGSETGSDIIHEDMFSISSEL-----QTXXXXXXXXX 156

Query: 196 WKPIKFGRKKSPPRSFPPPISSLCSPDGASVCIQSRRENGRLILDAVSVPSKKNFRAD 252
                   K++   S PPP++S+   D   + ++S RENGRL++ A   P +     D
Sbjct: 157 XXXXXXXXKRNTMASLPPPLTSMIGFD--CIEVKSHRENGRLVMMATRPPPRNRCLQD 207

[Close]

BLAST of Carg18409 vs. Swiss-Prot
Match: sp|Q9SY06|FAF1_ARATH (Protein FANTASTIC FOUR 1 OS=Arabidopsis thaliana OX=3702 GN=FAF1 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 3.7e-04
Identity = 39/126 (30.95%), Postives = 67/126 (53.17%), Query Frame = 0


Query: 120 LFQNSAPKSSVVPYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDG 179
           + QN    +    YV+P+ ++S   L   SL +CTESLG+E GSD        E      
Sbjct: 37  IVQNREDDTKKTAYVYPIEKRSVAKL---SLEMCTESLGTENGSDS-----GDEMSLLAL 96

Query: 180 DTTE-TEYPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGASVCIQSRRENGRLILD 239
           + T  ++ P + T   K   F  +++   SFPPP++S+   + + + ++S +E+GRL++ 
Sbjct: 97  EATNISKSPRLTTKPQKETSFMTREN---SFPPPLNSVNGFNNSRM-VKSYKEDGRLVVQ 150

Query: 240 AVSVPS 245
           A+ V S
Sbjct: 157 AIRVCS 150

[Close]

BLAST of Carg18409 vs. TrEMBL
Match: tr|A0A0A0KI67|A0A0A0KI67_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G426380 PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 2.5e-130
Identity = 297/471 (63.06%), Postives = 323/471 (68.58%), Query Frame = 0


Query: 1   MKTLFHDYKTLQKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKCFSAIKKVASSLA 60
           MKTL H+Y +LQKQGILT LPSSD  +P+LPPPSLRRTLSADMSS+K  S IKK+ SS A
Sbjct: 1   MKTL-HNYNSLQKQGILTILPSSDHHYPSLPPPSLRRTLSADMSSTKWCSPIKKIPSSQA 60

Query: 61  FSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKSIL 120
           F                                                      W SIL
Sbjct: 61  F---------------------------------HDNSNNNKIDSSKHGVHDSVPWSSIL 120

Query: 121 FQNSA----PKSSVV--PYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEF 180
             NS     PKS VV  PYVHPLL+K++HSLS+ SL ICTESLGSETGSDGFSSYPSSE 
Sbjct: 121 LHNSVSDDPPKSPVVAAPYVHPLLKKTSHSLSDISLQICTESLGSETGSDGFSSYPSSED 180

Query: 181 GDFDGDTTETEYPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGASVCIQSRRENGR 240
           GDFD   TET+Y +I TF+WKP+KF RKKSPPRSFPPPISSL SPDG S+CIQSRRE+GR
Sbjct: 181 GDFDRLITETDYSEIDTFEWKPVKFSRKKSPPRSFPPPISSLDSPDGVSICIQSRREDGR 240

Query: 241 LILDAVSVPSKKNFRADXXXXXXXXXXXXXXANLL-----------------VKEWKIVE 300
           L+LDAVSVPS+KNFRA+XXXXXXXXXX     NLL                 VKE +IVE
Sbjct: 241 LMLDAVSVPSRKNFRAEXXXXXXXXXXFRTPENLLVNEEEELEEMIAGEFEEVKESEIVE 300

Query: 301 ERDD---LEADESEIPMDEVARLSSSVMNFHRLAMMMKKPNGFINRNPAWPKEKDAPE-P 360
             +D   LE +E EIP+++  RLSSSVMNFHRL  MMKK NG INRNPAWPKEKDA E P
Sbjct: 301 VGNDENVLEVEELEIPIEKTPRLSSSVMNFHRLTNMMKKTNGLINRNPAWPKEKDASETP 360

Query: 361 LTPLSQSLPPRPRSLTAATAATSLNAYEYYWRSKPT----GIQNLKSQQQIQPIQSITRK 420
            TPLSQSLPPRP SLTAATA T LNAYEYYWRSKPT    GIQN   QQQ Q    ITRK
Sbjct: 361 TTPLSQSLPPRPPSLTAATAGTFLNAYEYYWRSKPTGKSAGIQNPNGQQQTQ----ITRK 420

Query: 421 FISSNNQMADEKQQIL-------NYLVPLSNGCKVPRRSVLLREPCCIATT 434
            ISSNNQMADEKQQIL       +YLVPLSNGCKVPRRSVLLREPCCIATT
Sbjct: 421 LISSNNQMADEKQQILVLKGNRGDYLVPLSNGCKVPRRSVLLREPCCIATT 433

[Close]

BLAST of Carg18409 vs. TrEMBL
Match: tr|A0A1S3BMD7|A0A1S3BMD7_CUCME (protein FAF-like, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491435 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 8.8e-112
Identity = 303/469 (64.61%), Postives = 329/469 (70.15%), Query Frame = 0


Query: 1   MKTLFHDYKTLQKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKCFSAIKKVASSLA 60
           MKTL H Y +LQ+QGILT LPSSD  +P+LPPPSLRRTLSADMSS+K  S IKK+ SS A
Sbjct: 1   MKTL-HSYNSLQQQGILTILPSSDHHYPSLPPPSLRRTLSADMSSTKWCSPIKKIPSSQA 60

Query: 61  FSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKSIL 120
           F                          XXXXXXXXXXXXXXXXXXXXXXXXXXXX     
Sbjct: 61  F---------------HHNKIECSKQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 FQNSAPKSSVVPYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGD 180
                        VHPLL+K++HSLS+ SL ICTESLGSETGSDGFSSYPSSE GDFDG 
Sbjct: 121 XXXXXXXXXXXXXVHPLLKKTSHSLSDISLQICTESLGSETGSDGFSSYPSSEDGDFDGL 180

Query: 181 TTETE-YPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGASVCIQSRRENGRLILDA 240
            TET+   DI TF+WKP+KF RKKSPPRSFPP ISSL SPDG S+ IQSRR++GRLILDA
Sbjct: 181 MTETDCSDDIDTFEWKPVKFSRKKSPPRSFPPLISSLDSPDGVSIGIQSRRKDGRLILDA 240

Query: 241 VSVPSKKNFRADXXXXXXXXXXXXXXANLL-------------------VKEWKIVE--- 300
           VSVPS+KNF   XXXXXXXXXXXXXX  LL                   VKE +IVE   
Sbjct: 241 VSVPSRKNFXXXXXXXXXXXXXXXXXXXLLVKXXXXEELEELIAGEFEEVKESEIVEVGN 300

Query: 301 ERDDLEADESEIPMDEVARLSSSVMNFHRLAMMMKKPNGFINRNPAWPKEKDAPE--PLT 360
           + + LE +E EIP+++  RLSSSVMNFHRL  MMKK NG INRNP W  EKD  E    T
Sbjct: 301 DENSLEVEELEIPIEKTPRLSSSVMNFHRLTNMMKKTNGLINRNPTWTNEKDGLETPTTT 360

Query: 361 PLSQSLPPRPRSLTAATAATSLNAYEYYWRSKPT----GIQNLKSQQQIQPIQSITRKFI 420
           PLSQSLPPRP SLTAATA + LNAYEYYWRSKPT    GIQN   QQQ Q    ITRK I
Sbjct: 361 PLSQSLPPRPPSLTAATAGSFLNAYEYYWRSKPTGKSAGIQNPNGQQQTQ----ITRKLI 420

Query: 421 SSNNQMADEKQQIL-------NYLVPLSNGCKVPRRSVLLREPCCIATT 434
           SSNNQM DEKQQIL       +YLVPLSNGCKVPRRSVLLREPCCIATT
Sbjct: 421 SSNNQMTDEKQQILVLKGNRGDYLVPLSNGCKVPRRSVLLREPCCIATT 449

[Close]

BLAST of Carg18409 vs. TrEMBL
Match: tr|A0A0A0M0D7|A0A0A0M0D7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G635920 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.7e-59
Identity = 174/441 (39.46%), Postives = 227/441 (51.47%), Query Frame = 0


Query: 1   MKTLFHDYKTLQKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKCFSAIKKVASSLA 60
           +K     Y   +KQGI+ AL SSD     + P SLRRTLSADMSS K  S +KKV+S   
Sbjct: 4   LKIFQASYSNDKKQGIVAAL-SSDSDHSQIQPSSLRRTLSADMSSHKWISHMKKVSSFQD 63

Query: 61  FSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKSIL 120
           F  P                                                   W SI+
Sbjct: 64  FHNP----------------------------------------KTEDETEGVGVWSSIV 123

Query: 121 FQNSAPKSSVV-PYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDG 180
            ++     ++  PYVHPLL++S   LSE SL ICTESLGSETGSDGFSSYPSSE GD D 
Sbjct: 124 KESRQESKNISDPYVHPLLKRSGKCLSEKSLEICTESLGSETGSDGFSSYPSSENGDTDD 183

Query: 181 DTTETEYPDIQTF----QWKPIKFGRKKSPP-RSFPPPISSLCSPDGASVCIQSRRENGR 240
           +  E      QTF    QWKP+K   KKSPP RS PPP+ +L  PDG ++ +Q RR+NGR
Sbjct: 184 ENEENMIEGTQTFEVENQWKPVKISYKKSPPRRSLPPPLPTLSGPDGETLRMQPRRDNGR 243

Query: 241 LILDAVSVPSKKNFRADXXXXXXXXXXXXXXANLLVKEWKIVEERDDLEADESEIPMDEV 300
           L+L+A+SVPS+ NF A                +L+ +  KI + + + E  E+E    ++
Sbjct: 244 LVLEAMSVPSQNNFHAQ--RQDGRLVLTLVSRHLINQVEKIDDWKMEEEGKENEQKTTKL 303

Query: 301 ARLSSSVMNFHRLA-MMMKKPNGFINRNPAWPKEKDAPEPLTPLSQSLPPRPRSLTAATA 360
           +     ++  HRLA MM  K     NRNP+ P    A +P+            S  A   
Sbjct: 304 SEFPRGLLTTHRLASMMSSKTIALANRNPSLPPRPKAAQPII-----------SCVAPPV 363

Query: 361 ATSLNAYEYYWRSKPTGIQNLKSQQQIQPIQSITRKFISSNNQMADEKQQILNYLVPLSN 420
           A SLNAYEYYWRSKPTG       QQ    +S +RK + S N+ A+E++++   +V  SN
Sbjct: 364 AASLNAYEYYWRSKPTGKAGTPVGQQQATFKSSSRKVMISKNRTANEEEKL---VVMCSN 387

Query: 421 G-CKVPRRSVLLREPCCIATT 434
           G CK  RR+V+  EP CIAT+
Sbjct: 424 GSCKEVRRTVVFWEPRCIATS 387

[Close]

BLAST of Carg18409 vs. TrEMBL
Match: tr|A0A1S3BPJ5|A0A1S3BPJ5_CUCME (protein FAF-like, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491936 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 2.1e-57
Identity = 169/437 (38.67%), Postives = 218/437 (49.89%), Query Frame = 0


Query: 8   YKTLQKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKCFSAIKKVASSLAFSLPXXX 67
           Y   +KQGI+  L SSD     +   SLRRTLSADMSS K  S +KK +S   F  P   
Sbjct: 11  YSNDKKQGIVAVL-SSDSDHSQIQTSSLRRTLSADMSSHKWISLMKKTSSFQDFHNP--- 70

Query: 68  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKSILFQNSAPK 127
                                                           W SI+ ++    
Sbjct: 71  -------------------------------------KTEDETEGVGVWSSIIKESRQDS 130

Query: 128 SSVV-PYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGDTTETEY 187
             ++ PYVHPLL++S   LSE SL ICTESLGSETGSDGFSSYPSSE GD D +  E   
Sbjct: 131 KPILDPYVHPLLKRSGKCLSEKSLEICTESLGSETGSDGFSSYPSSENGDTDDENEENMI 190

Query: 188 PDIQTF----QWKPIKFGRKKSPP-RSFPPPISSLCSPDGASVCIQSRRENGRLILDAVS 247
              QTF    QWKP+K   KKSPP RS PPP+ +L  PDG ++ +Q RR+NGRL+L+A+S
Sbjct: 191 ESTQTFEMENQWKPVKISHKKSPPRRSLPPPLPTLSGPDGETLRMQPRRDNGRLVLEAMS 250

Query: 248 VPSKKNF---RADXXXXXXXXXXXXXXANLLVKEWKIVEERDDLEADESEIPMDEVARLS 307
           VPS+ NF   R D                  + EWK+ EE    E   +++     +   
Sbjct: 251 VPSQNNFHAQRQDGRLVLTLINRHLINQVEKIDEWKMEEEEKGKEQKTTKL-----SEFP 310

Query: 308 SSVMNFHRLA-MMMKKPNGFINRNPAWPKEKDAPEPLTPLSQSLPPRPRSLTAATAATSL 367
             ++N HRLA MM  K     NRNP+ P    A +P+               A     SL
Sbjct: 311 RGLLNTHRLASMMSSKTIALANRNPSLPPRPKAGQPII-----------GCVAPPVVASL 370

Query: 368 NAYEYYWRSKPTGIQNLKSQQQIQPIQSITRKFISSNNQMADEKQQILNYLVPLSNG-CK 427
           NAYEYYWR+KPTG       QQ    +S +RK + S N+ A+E++++   +V  SNG CK
Sbjct: 371 NAYEYYWRTKPTGKAGTPLGQQPATFKSSSRKVMISKNRTANEEEKL---VVLCSNGSCK 387

Query: 428 VPRRSVLLREPCCIATT 434
             RR+V+  EP CIAT+
Sbjct: 431 EVRRTVVFWEPRCIATS 387

[Close]

BLAST of Carg18409 vs. TrEMBL
Match: tr|A0A2K2C1J1|A0A2K2C1J1_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G216000v3 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.5e-50
Identity = 192/509 (37.72%), Postives = 247/509 (48.53%), Query Frame = 0


Query: 12  QKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKC-----FSAIKKVASSLAFSLPXX 71
           ++QGI++ L  SD++       SLRRTLSADMSS K      F  +KK+ASS  F     
Sbjct: 24  KRQGIVSIL-GSDVERTKSAAASLRRTLSADMSSKKWQAQHGFYPLKKIASSDHFPACNI 83

Query: 72  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKSILFQNSAP 131
                                             XXXXXXXXXXXXXXX           
Sbjct: 84  TDSSSSEDEDYEDRPKGTEAQGQFDIWSSIQEDKXXXXXXXXXXXXXXXXXXXXXXXXXX 143

Query: 132 KSSVVPYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGD------ 191
           K +V PYVHPL+++SA SLS+ SL ICTESLGSETGSDGFSSYP SE GD + D      
Sbjct: 144 K-NVQPYVHPLVKRSASSLSKKSLEICTESLGSETGSDGFSSYPPSETGDAEEDKEEEQR 203

Query: 192 ----TTETEYPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGASVCIQSRRENGRLI 251
               T + +  D++  ++       KKS PRSFPPPI SL S DGASV ++SRR+NGRL+
Sbjct: 204 QERVTLKFDTEDLRVAKYNLAAANCKKSQPRSFPPPIPSLSSRDGASVLMKSRRDNGRLV 263

Query: 252 LDAVSVPSKKNFRAD----XXXXXXXXXXXXXXANLLVKEWKIVEERDDLEAD------- 311
           L+AVSVPS+KNF A                         E   V E+ D+E +       
Sbjct: 264 LEAVSVPSQKNFHAQRQDGRLVLTFANTVDQDEEERQKNEEMNVMEQFDVEIENSXXXXX 323

Query: 312 ----------------------------ESEIPMDEVARLSSSVMNFHRLAMMMKKPNGF 371
                                       E+   M+E  +LSS V++ HRLA+MM K   F
Sbjct: 324 XXXXXXXXXXXXXXXXXXXXXNERGGDKEARFVMEEAPKLSSGVISVHRLALMMNKSLVF 383

Query: 372 INRNPAWPKEKD------APEPLTPLSQSLPPRP---------------RSLTAATAATS 431
            NRNP WP + +        EP+T L+QSLPPRP                +   A AA S
Sbjct: 384 ANRNPTWPNKFNDISKFGEVEPITSLTQSLPPRPPVARMIPSXXXXTMATTEVTAKAAAS 443

Query: 432 LNAYEYYWRSK-----PTGIQNLKSQQQIQPIQSITRKFISSNNQMADEKQQIL------ 434
            NA EY+W+ K      T + N  SQ+Q   +     K   S   + +E+Q+++      
Sbjct: 444 FNACEYFWKPKSMTTTTTSVLNPISQKQASSLGIHDNKLALSKKFVPNEQQELVVLRGNK 503

The following BLAST results are available for this feature:

BLAST of Carg18409 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513350.1	1.1e-185	88.33	protein FAF-like, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022986115.1	9.9e-184	94.31	protein FAF-like, chloroplastic [Cucurbita maxima]	[more]
XP_022944670.1	2.1e-181	85.68	protein FAF-like, chloroplastic [Cucurbita moschata]	[more]
XP_004140267.1	3.7e-130	63.06	PREDICTED: protein FAF-like, chloroplastic [Cucumis sativus] >KGN48052.1 hypothe...	[more]
XP_008449599.1	1.3e-111	64.61	PREDICTED: protein FAF-like, chloroplastic [Cucumis melo]	[more]

BLAST of Carg18409 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22090.1	8.5e-28	34.62	Protein of unknown function (DUF3049)	[more]
AT5G19260.1	3.7e-07	32.46	Protein of unknown function (DUF3049)	[more]
AT1G03170.1	4.1e-06	35.59	Protein of unknown function (DUF3049)	[more]
AT3G06020.1	7.0e-06	33.05	Protein of unknown function (DUF3049)	[more]
AT4G02810.1	2.0e-05	30.95	Protein of unknown function (DUF3049)	[more]

BLAST of Carg18409 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q0V865\|FAFL_ARATH	1.5e-26	34.62	Protein FAF-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g22090 PE=...	[more]
sp\|Q6NMR8\|FAF3_ARATH	6.7e-06	32.46	Protein FANTASTIC FOUR 3 OS=Arabidopsis thaliana OX=3702 GN=FAF3 PE=2 SV=1	[more]
sp\|Q8GXU9\|FAF2_ARATH	7.4e-05	35.59	Protein FANTASTIC FOUR 2 OS=Arabidopsis thaliana OX=3702 GN=FAF2 PE=2 SV=1	[more]
sp\|Q9SFG6\|FAF4_ARATH	1.3e-04	33.05	Protein FANTASTIC FOUR 4 OS=Arabidopsis thaliana OX=3702 GN=FAF4 PE=2 SV=1	[more]
sp\|Q9SY06\|FAF1_ARATH	3.7e-04	30.95	Protein FANTASTIC FOUR 1 OS=Arabidopsis thaliana OX=3702 GN=FAF1 PE=2 SV=1	[more]

BLAST of Carg18409 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KI67\|A0A0A0KI67_CUCSA	2.5e-130	63.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G426380 PE=4 SV=1	[more]
tr\|A0A1S3BMD7\|A0A1S3BMD7_CUCME	8.8e-112	64.61	protein FAF-like, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491435 PE=4 SV=...	[more]
tr\|A0A0A0M0D7\|A0A0A0M0D7_CUCSA	1.7e-59	39.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G635920 PE=4 SV=1	[more]
tr\|A0A1S3BPJ5\|A0A1S3BPJ5_CUCME	2.1e-57	38.67	protein FAF-like, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491936 PE=4 SV=...	[more]
tr\|A0A2K2C1J1\|A0A2K2C1J1_POPTR	1.5e-50	37.72	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G216000v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021410	FAF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18409-RA	Carg18409-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021410	The fantastic four family	PFAM	PF11250	FAF	coord: 208..261 e-value: 7.2E-18 score: 64.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 323..345
None	No IPR available	PANTHER	PTHR33155	FAMILY NOT NAMED	coord: 12..432
None	No IPR available	PANTHER	PTHR33155:SF3	PROTEIN FAF-LIKE, CHLOROPLASTIC	coord: 12..432

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg18409	Cla008617	Watermelon (97103) v1	carwmB0413
Carg18409	Csa6G426380	Cucumber (Chinese Long) v2	carcuB0445
Carg18409	MELO3C014521	Melon (DHL92) v3.5.1	carmeB0423
Carg18409	ClCG02G022450	Watermelon (Charleston Gray)	carwcgB0409
Carg18409	CSPI06G23440	Wild cucumber (PI 183967)	carcpiB0450
Carg18409	Cucsa.185920	Cucumber (Gy14) v1	carcgyB0480
Carg18409	CmaCh02G013030	Cucurbita maxima (Rimu)	carcmaB0576
Carg18409	CmaCh20G001450	Cucurbita maxima (Rimu)	carcmaB0575
Carg18409	CmoCh02G013440	Cucurbita moschata (Rifu)	carcmoB0560
Carg18409	CmoCh20G001620	Cucurbita moschata (Rifu)	carcmoB0559
Carg18409	Lsi10G011350	Bottle gourd (USVL1VR-Ls)	carlsiB375
Carg18409	Cp4.1LG16g08220	Cucurbita pepo (Zucchini)	carcpeB0579
Carg18409	Cp4.1LG05g04450	Cucurbita pepo (Zucchini)	carcpeB0583
Carg18409	CsGy6G022740	Cucumber (Gy14) v2	carcgybB0421
Carg18409	MELO3C014521.2	Melon (DHL92) v3.6.1	carmedB0426
Carg18409	CsaV3_6G038580	Cucumber (Chinese Long) v3	carcucB0446
Carg18409	Cla97C02G048530	Watermelon (97103) v2	carwmbB0439
Carg18409	Bhi10G000149	Wax gourd	carwgoB0501

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg18409	Carg02657	Silver-seed gourd	carcarB433

The following block(s) are covering this gene:


Gene	Organism	Block
Carg18409	Watermelon (Charleston Gray)	carwcgB0407
Carg18409	Watermelon (97103) v1	carwmB0411
Carg18409	Watermelon (97103) v2	carwmbB0437
Carg18409	Silver-seed gourd	carcarB289
Carg18409	Cucumber (Gy14) v1	carcgyB0481
Carg18409	Cucurbita maxima (Rimu)	carcmaB0578
Carg18409	Cucurbita moschata (Rifu)	carcmoB0557
Carg18409	Cucurbita moschata (Rifu)	carcmoB0562
Carg18409	Cucurbita pepo (Zucchini)	carcpeB0580
Carg18409	Cucurbita pepo (Zucchini)	carcpeB0584
Carg18409	Wild cucumber (PI 183967)	carcpiB0449
Carg18409	Cucumber (Chinese Long) v2	carcuB0444
Carg18409	Cucumber (Chinese Long) v3	carcucB0445
Carg18409	Bottle gourd (USVL1VR-Ls)	carlsiB378
Carg18409	Melon (DHL92) v3.5.1	carmeB0422
Carg18409	Melon (DHL92) v3.6.1	carmedB0425