CmoCh20G001620 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh20G001620
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Protein FAF-like, chloroplastic
Location	Cmo_Chr20 : 813015 .. 814298 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGACTCTGTTCCATGACTACAAAACCCTTCAAAAACAGGGCATCCTCACCGCTCTACCTTCCTCGGATCTCCAATTCCCCACACTCCCACCGCCTTCCCTGAGAAGAACCCTCTCCGCCGACATGTCCTCCTCCAAGTGCTTCTCCGCCATCAAGAAGGTTGCTTCTTCCCTAGCATTCTCTCTTCCTCCTTATTCTTCTTCTTCTGAAGACGAACAGGACTGTGACGAAACCATTGGGTTTTGGAGCTCTGTTCATGAAGAACAGAGGAAGAACAGAACAGAGTGTCAAAAACAGGGGAATAATGATGATGATGATGATTCTTGGAAGTCAATTCTGTTTCAGAACTCTGCTCCCAAATCGTCTGTTGTTCCTTATGTTCATCCTCTTCTCCAAAAATCAGCTCACTCTCTCAGTGAAAACAGTCTTCTAATTTGCACTGAGAGTCTTGGATCCGAGACTGGCTCCGATGGCTTCTCTTCCTACCCTTCCTCGGAGTTTGGAGACTTCGACGGAGATACGACGGAAACAGAGTACCCCGACATACAGACATTTCAATGGAAGCCCATCAAATTCGGTCGCAAGAAATCGCCGCCGAGGTCTTTTCCCCCGCCGATTTCTTCTCTCTGTTCTCCCGACGGCGCCTCCGTCTGCATTCAGTCCCGCCGGGAAAATGGGCGGTTAATTCTCGACGCCGTCTCTGTTCCCTCAAAGAAGAATTTCCGCGCCGATCGCCGAGATGGCCGTCTCATTCTCTCTTTTGTTACAACTCCGGCGAATTTATTGATTAAAGAATCGAAAATTGTCGAAGAGAGAGACGATTTGGAAGCCGACGACTCGGAAATCCCGATGGATGAGGTTGCGAGATTGTCGAGCTCTGTTATGAACTTCCATCGATTAGCAATGATGATGAAGAAGCCAAATGGATTCATCAATCGGAATCCGGCATGGCCAAAGGAAAAAGATGCTCCAGAGCCACTAACCCCACTATCACAGTCACTTCCACCGCGTCCTCCGTCGCTCACGGCGGCGACAGCAGCGACTTCTCTGAATGCATACGAGTACTACTGGCGATCGAAACCAACCGGAATTCAAAACCTAAAGAGCCAACAACAAATTCAACCCATCCAGAGCATAACCTGCAAATTTATATCTTCAAACAATCAAATGGCGGATGAGAAACAGCAAATTCTAAACTATTTGGTTCCATTGTCGAATGGATGTAAAGTTCCCAGAAGGTCTGTTCTTCTCCGGGAGCCCTGCTGCATTGCCACCACCTAA

mRNA sequence

ATGAAGACTCTGTTCCATGACTACAAAACCCTTCAAAAACAGGGCATCCTCACCGCTCTACCTTCCTCGGATCTCCAATTCCCCACACTCCCACCGCCTTCCCTGAGAAGAACCCTCTCCGCCGACATGTCCTCCTCCAAGTGCTTCTCCGCCATCAAGAAGGTTGCTTCTTCCCTAGCATTCTCTCTTCCTCCTTATTCTTCTTCTTCTGAAGACGAACAGGACTGTGACGAAACCATTGGGTTTTGGAGCTCTGTTCATGAAGAACAGAGGAAGAACAGAACAGAGTGTCAAAAACAGGGGAATAATGATGATGATGATGATTCTTGGAAGTCAATTCTGTTTCAGAACTCTGCTCCCAAATCGTCTGTTGTTCCTTATGTTCATCCTCTTCTCCAAAAATCAGCTCACTCTCTCAGTGAAAACAGTCTTCTAATTTGCACTGAGAGTCTTGGATCCGAGACTGGCTCCGATGGCTTCTCTTCCTACCCTTCCTCGGAGTTTGGAGACTTCGACGGAGATACGACGGAAACAGAGTACCCCGACATACAGACATTTCAATGGAAGCCCATCAAATTCGGTCGCAAGAAATCGCCGCCGAGGTCTTTTCCCCCGCCGATTTCTTCTCTCTGTTCTCCCGACGGCGCCTCCGTCTGCATTCAGTCCCGCCGGGAAAATGGGCGGTTAATTCTCGACGCCGTCTCTGTTCCCTCAAAGAAGAATTTCCGCGCCGATCGCCGAGATGGCCGTCTCATTCTCTCTTTTGTTACAACTCCGGCGAATTTATTGATTAAAGAATCGAAAATTGTCGAAGAGAGAGACGATTTGGAAGCCGACGACTCGGAAATCCCGATGGATGAGGTTGCGAGATTGTCGAGCTCTGTTATGAACTTCCATCGATTAGCAATGATGATGAAGAAGCCAAATGGATTCATCAATCGGAATCCGGCATGGCCAAAGGAAAAAGATGCTCCAGAGCCACTAACCCCACTATCACAGTCACTTCCACCGCGTCCTCCGTCGCTCACGGCGGCGACAGCAGCGACTTCTCTGAATGCATACGAGTACTACTGGCGATCGAAACCAACCGGAATTCAAAACCTAAAGAGCCAACAACAAATTCAACCCATCCAGAGCATAACCTGCAAATTTATATCTTCAAACAATCAAATGGCGGATGAGAAACAGCAAATTCTAAACTATTTGGTTCCATTGTCGAATGGATGTAAAGTTCCCAGAAGGTCTGTTCTTCTCCGGGAGCCCTGCTGCATTGCCACCACCTAA

Coding sequence (CDS)

ATGAAGACTCTGTTCCATGACTACAAAACCCTTCAAAAACAGGGCATCCTCACCGCTCTACCTTCCTCGGATCTCCAATTCCCCACACTCCCACCGCCTTCCCTGAGAAGAACCCTCTCCGCCGACATGTCCTCCTCCAAGTGCTTCTCCGCCATCAAGAAGGTTGCTTCTTCCCTAGCATTCTCTCTTCCTCCTTATTCTTCTTCTTCTGAAGACGAACAGGACTGTGACGAAACCATTGGGTTTTGGAGCTCTGTTCATGAAGAACAGAGGAAGAACAGAACAGAGTGTCAAAAACAGGGGAATAATGATGATGATGATGATTCTTGGAAGTCAATTCTGTTTCAGAACTCTGCTCCCAAATCGTCTGTTGTTCCTTATGTTCATCCTCTTCTCCAAAAATCAGCTCACTCTCTCAGTGAAAACAGTCTTCTAATTTGCACTGAGAGTCTTGGATCCGAGACTGGCTCCGATGGCTTCTCTTCCTACCCTTCCTCGGAGTTTGGAGACTTCGACGGAGATACGACGGAAACAGAGTACCCCGACATACAGACATTTCAATGGAAGCCCATCAAATTCGGTCGCAAGAAATCGCCGCCGAGGTCTTTTCCCCCGCCGATTTCTTCTCTCTGTTCTCCCGACGGCGCCTCCGTCTGCATTCAGTCCCGCCGGGAAAATGGGCGGTTAATTCTCGACGCCGTCTCTGTTCCCTCAAAGAAGAATTTCCGCGCCGATCGCCGAGATGGCCGTCTCATTCTCTCTTTTGTTACAACTCCGGCGAATTTATTGATTAAAGAATCGAAAATTGTCGAAGAGAGAGACGATTTGGAAGCCGACGACTCGGAAATCCCGATGGATGAGGTTGCGAGATTGTCGAGCTCTGTTATGAACTTCCATCGATTAGCAATGATGATGAAGAAGCCAAATGGATTCATCAATCGGAATCCGGCATGGCCAAAGGAAAAAGATGCTCCAGAGCCACTAACCCCACTATCACAGTCACTTCCACCGCGTCCTCCGTCGCTCACGGCGGCGACAGCAGCGACTTCTCTGAATGCATACGAGTACTACTGGCGATCGAAACCAACCGGAATTCAAAACCTAAAGAGCCAACAACAAATTCAACCCATCCAGAGCATAACCTGCAAATTTATATCTTCAAACAATCAAATGGCGGATGAGAAACAGCAAATTCTAAACTATTTGGTTCCATTGTCGAATGGATGTAAAGTTCCCAGAAGGTCTGTTCTTCTCCGGGAGCCCTGCTGCATTGCCACCACCTAA

Homology

[Close]

BLAST of CmoCh20G001620 vs. Swiss-Prot
Match: FAFL_ARATH (Protein FAF-like, chloroplastic OS=Arabidopsis thaliana GN=At5g22090 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.7e-43
Identity = 176/482 (36.51%), Postives = 235/482 (48.76%), Query Frame = 1


Query: 12  QKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKC-----FSAIKKVASSLAFSLPPY 71
           ++QGI++ L    +   T   PSLRRT SAD+SS        FS +K+++SS    L P 
Sbjct: 18  KQQGIVSIL--GGISSNTSSAPSLRRTFSADLSSKTWVSQNGFSPMKRISSSE--KLRP- 77

Query: 72  SSSSEDEQDCDETIGFWSSVHEEQRKNRTECQKQGNNDDDDDSWKSILFQNSAPKSSV-- 131
               E E++    +  W+ + +++   + E + +    D    W SIL +    +SS   
Sbjct: 78  -DEEEAEEESRSGVDIWAQIQQDKNDKKKEEEIEPGQSD---VWSSILSEKKKTESSKDT 137

Query: 132 --VPYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGD-------- 191
              PYVHPL+ K A SLSE SL ICTESLGSETG DGFSS+ SSE GD + +        
Sbjct: 138 VPPPYVHPLM-KRASSLSEKSLEICTESLGSETGCDGFSSHASSETGDAEIEIHDETNLV 197

Query: 192 --TTETEYPDIQTFQWKPIKFGRKKS----------PPRSFPPPISSLCSPDGASVCIQS 251
              TET+  +I   +   I   ++ S          PP SFPPPI SL S  G+S+ +++
Sbjct: 198 VNVTETKVEEITETE---IVVEQESSIIVPNHIIELPPGSFPPPIRSLSSQSGSSLHMKT 257

Query: 252 RRENGRLILDAVSVPSKKNFRADRRDGRLILSF--VTTPANLLIKESKI---------VE 311
           RR+NGRL+L+AVS+PS  NF A R+DGRL+L+F  ++   N   KE +I          E
Sbjct: 258 RRDNGRLVLEAVSMPSHNNFSAKRQDGRLLLTFAEISNEPN-YDKEDEIDSEVQWFDEEE 317

Query: 312 ERDDLEADDSEIPMDEVARLSSSVM----------NFHRLAMMMKKPNGFINRNPAWP-- 371
           E ++ E D+ E   DE A   + ++            HRLA    KP G   RN  WP  
Sbjct: 318 EEEEEEEDEEEEAPDEFAYKPNGLLYKMAQKPIPITVHRLA---HKPIGVPKRNSRWPMA 377

Query: 372 KEKDAPEPL-TPLSQSLPPR-----------PPSLTAAT-AATSLNAYEYYWRSKPTGI- 427
            E D    L TP+  SLPPR           PPS    T  A   N  +Y W+S  T   
Sbjct: 378 DEFDTKSDLSTPVVHSLPPRPRVAQLARSTKPPSTVDDTVGAACFNTCDYSWKSTNTESF 437

[Close]

BLAST of CmoCh20G001620 vs. Swiss-Prot
Match: FAF3_ARATH (Protein FANTASTIC FOUR 3 OS=Arabidopsis thaliana GN=FAF3 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.3e-11
Identity = 58/209 (27.75%), Postives = 98/209 (46.89%), Query Frame = 1


Query: 85  SVHEEQRKNRTECQKQGNNDDDDDSWKSILFQNSAPKSSVVPYVHPLLQKSAH------- 144
           S H E  +NR + +   +   D   W S+   +S   SS         + S +       
Sbjct: 46  SSHAEDTRNRNDDKAAASPVSDSSGWSSLQSLSSGSSSSTKTTTSSEKESSYYVQRPSSC 105

Query: 145 -SLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGDTTETEYPDIQTFQWKPIKFGRK 204
            +LS+ SL +CTE+LGSE+GSD       ++  +      +T+     T + + +K  ++
Sbjct: 106 RALSDQSLALCTENLGSESGSD------VTDIDELFSLDVQTKNLGETTTETRTLKSRKR 165

Query: 205 KSPPRSFPPPISSLCSPDGASVCIQSR--RENGRLILDAVSVPSKKN-FRADRRDGRLIL 264
              P   PPP++++        CIQ R  RENGRL++ A + P +   F+ADR +GRL L
Sbjct: 166 SVSPSDLPPPLTTM----RGFQCIQMRPHRENGRLVMTATNAPPRNGCFQADRSNGRLRL 225

Query: 265 SFVTTPANLLIKESKIVEERDDLEADDSE 283
           S +      +  E + +E  +  E ++ E
Sbjct: 226 SILKDSNEFVENEEETIEPEETEEYEEEE 244

[Close]

BLAST of CmoCh20G001620 vs. Swiss-Prot
Match: FAF4_ARATH (Protein FANTASTIC FOUR 4 OS=Arabidopsis thaliana GN=FAF4 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.9e-10
Identity = 61/194 (31.44%), Postives = 94/194 (48.45%), Query Frame = 1


Query: 102 NNDDDDDSWKSILFQNSAPKSSVVPYVHPLLQK--SAHSLSENSLLICTESLGSETGSDG 161
           N+D +  SW  +   +++  +       PL Q   S  +LS+ SL +CTESLGSETGSD 
Sbjct: 69  NSDTNSGSWSFLESLSNSSSNDKEKKTLPLFQSPSSRRTLSDESLALCTESLGSETGSDI 128

Query: 162 FSS---YPSSEFGDFDGDTTETEYPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGA 221
                   SSE    +  TT T           P +  RK++   S PPP++S+   D  
Sbjct: 129 IHEDMFSISSELQTMETRTTSTTS--------NPSRQDRKRNTMASLPPPLTSMIGFD-- 188

Query: 222 SVCIQSRRENGRLILDAVSVPSKKNFRADRRDGRLILSFVTTPANLL---IKESKIVEER 281
            + ++S RENGRL++ A   P +     DR +G + L+ +    + +    KE K  EE 
Sbjct: 189 CIEVKSHRENGRLVMMATRPPPRNRCLQDRSNGCVRLAILIDSDDHIETETKEEKEEEEE 248

Query: 282 DDLEA---DDSEIP 285
           + +E    ++ EIP
Sbjct: 249 ETIETVRDNEEEIP 252

[Close]

BLAST of CmoCh20G001620 vs. Swiss-Prot
Match: FAF2_ARATH (Protein FANTASTIC FOUR 2 OS=Arabidopsis thaliana GN=FAF2 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.0e-07
Identity = 64/201 (31.84%), Postives = 96/201 (47.76%), Query Frame = 1


Query: 97  CQKQGNND--DDDDSWKSILFQNSAPKSSVVP------YVHPLLQKSAHSLSENSLLICT 156
           CQ Q N      DD       Q+ +  +S+        YVHP+ ++S   L+E SL +CT
Sbjct: 6   CQPQINESFYQKDDMGGLSFLQSMSDITSIAQTKEDKAYVHPMEKRSVSKLNEKSLEMCT 65

Query: 157 ESLGSETGSDGFSSYPSSEFGDFDGDTTETEYPDIQTFQWKPIKFGR--KKSPP----RS 216
           ESLG+ETGS+   S        F+  TT    P     Q KP +      K+PP     S
Sbjct: 66  ESLGTETGSE---SGDELSLLAFEATTT----PRAPPRQLKPQEDTNLPDKTPPMSRNNS 125

Query: 217 FPPPISSLCSPDGASVCIQSRRENGRLILDAVSVPSKKN-FRADRRDGRLILSFVTTPAN 276
           FPPPI         +  ++   E+GR+++ A+ V S  + F ++R +GRL L  +T+ ++
Sbjct: 126 FPPPI-KFVEDSKYNRMVRWLGEDGRIVVQAIRVSSPPSCFVSERGEGRLRL-ILTSESS 185

Query: 277 LLIKESKIVEERDDLEADDSE 283
           LL    +  EE +  E  D E
Sbjct: 186 LLSHNHEEEEEEETEEGIDEE 197

[Close]

BLAST of CmoCh20G001620 vs. Swiss-Prot
Match: FAF1_ARATH (Protein FANTASTIC FOUR 1 OS=Arabidopsis thaliana GN=FAF1 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.0e-07
Identity = 57/199 (28.64%), Postives = 99/199 (49.75%), Query Frame = 1


Query: 99  KQGNNDDDDDSWKSILF--------QNSAPKSSVVPYVHPLLQKSAHSLSENSLLICTES 158
           KQ + + D   W  + +        QN    +    YV+P+ ++S   +++ SL +CTES
Sbjct: 14  KQVSQNPDVGGWSFLQYFSEPKGIVQNREDDTKKTAYVYPIEKRS---VAKLSLEMCTES 73

Query: 159 LGSETGSDGFSSYPSSEFGDFDGDTTE-TEYPDIQTFQWKPIKFGRKKSPPRSFPPPISS 218
           LG+E GSD        E      + T  ++ P + T   K   F  +++   SFPPP++S
Sbjct: 74  LGTENGSDS-----GDEMSLLALEATNISKSPRLTTKPQKETSFMTREN---SFPPPLNS 133

Query: 219 LCSPDGASVCIQSRRENGRLILDAVSVPS-KKNFRADRRDGRLILSFVTTPANLLIKESK 278
           +   + + + ++S +E+GRL++ A+ V S  + F ++RR+GRL L       N    E +
Sbjct: 134 VNGFNNSRM-VKSYKEDGRLVVQAIRVCSPPRCFVSERREGRLRLCLSQNSLNSQDAEEE 193

Query: 279 IVEERDDLEADDSEIPMDE 288
             EE +D + D  E   +E
Sbjct: 194 FEEEDEDDQYDAEEEEEEE 200

[Close]

BLAST of CmoCh20G001620 vs. TrEMBL
Match: A0A0A0KI67_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G426380 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 6.7e-143
Identity = 302/465 (64.95%), Postives = 334/465 (71.83%), Query Frame = 1


Query: 1   MKTLFHDYKTLQKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKCFSAIKKVASSLA 60
           MKTL H+Y +LQKQGILT LPSSD  +P+LPPPSLRRTLSADMSS+K  S IKK+ SS A
Sbjct: 1   MKTL-HNYNSLQKQGILTILPSSDHHYPSLPPPSLRRTLSADMSSTKWCSPIKKIPSSQA 60

Query: 61  FSLPPYSSSSEDEQDCDETIGFWSSVHEEQRKNRTECQKQGNNDDDDDSWKSILFQNSA- 120
           F                         H+    N+ +  K G +  D   W SIL  NS  
Sbjct: 61  F-------------------------HDNSNNNKIDSSKHGVH--DSVPWSSILLHNSVS 120

Query: 121 ---PKSSVV--PYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGD 180
              PKS VV  PYVHPLL+K++HSLS+ SL ICTESLGSETGSDGFSSYPSSE GDFD  
Sbjct: 121 DDPPKSPVVAAPYVHPLLKKTSHSLSDISLQICTESLGSETGSDGFSSYPSSEDGDFDRL 180

Query: 181 TTETEYPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGASVCIQSRRENGRLILDAV 240
            TET+Y +I TF+WKP+KF RKKSPPRSFPPPISSL SPDG S+CIQSRRE+GRL+LDAV
Sbjct: 181 ITETDYSEIDTFEWKPVKFSRKKSPPRSFPPPISSLDSPDGVSICIQSRREDGRLMLDAV 240

Query: 241 SVPSKKNFRADRRDGRLILSFVTTPANLL-----------------IKESKIVEERDD-- 300
           SVPS+KNFRA+RRDGRLILS   TP NLL                 +KES+IVE  +D  
Sbjct: 241 SVPSRKNFRAERRDGRLILSLFRTPENLLVNEEEELEEMIAGEFEEVKESEIVEVGNDEN 300

Query: 301 -LEADDSEIPMDEVARLSSSVMNFHRLAMMMKKPNGFINRNPAWPKEKDAPE-PLTPLSQ 360
            LE ++ EIP+++  RLSSSVMNFHRL  MMKK NG INRNPAWPKEKDA E P TPLSQ
Sbjct: 301 VLEVEELEIPIEKTPRLSSSVMNFHRLTNMMKKTNGLINRNPAWPKEKDASETPTTPLSQ 360

Query: 361 SLPPRPPSLTAATAATSLNAYEYYWRSKPT----GIQNLKSQQQIQPIQSITCKFISSNN 420
           SLPPRPPSLTAATA T LNAYEYYWRSKPT    GIQN   QQQ Q    IT K ISSNN
Sbjct: 361 SLPPRPPSLTAATAGTFLNAYEYYWRSKPTGKSAGIQNPNGQQQTQ----ITRKLISSNN 420

Query: 421 QMADEKQQIL-------NYLVPLSNGCKVPRRSVLLREPCCIATT 428
           QMADEKQQIL       +YLVPLSNGCKVPRRSVLLREPCCIATT
Sbjct: 421 QMADEKQQILVLKGNRGDYLVPLSNGCKVPRRSVLLREPCCIATT 433

[Close]

BLAST of CmoCh20G001620 vs. TrEMBL
Match: B9RJ16_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1756120 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 3.3e-73
Identity = 208/528 (39.39%), Postives = 277/528 (52.46%), Query Frame = 1


Query: 12  QKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKC-----FSAIKKVASSLAF----- 71
           +KQGI++ L  SD +  T   PSLRRTLSADMSS K      FS +KK+ASS  F     
Sbjct: 23  KKQGIVSIL-GSDYE-RTKSAPSLRRTLSADMSSKKWQSQHGFSPLKKIASSGEFPISIT 82

Query: 72  ---SLPPYSSSSEDEQDCDETIGFWSSVHEEQRKNRTECQKQGNNDDDDDSWKSILFQNS 131
              S  P S   E E++       WSS+ EE+ K      K   N    D W SIL Q +
Sbjct: 83  DSSSSSPSSLEGEYERESRGRFEIWSSIQEEKEK------KDQENPGQFDIWSSILTQKA 142

Query: 132 APKSSVVP--YVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGD-- 191
              +  +P  YVHPL+++SA SLSE SL ICTESLGSE GSDGFSSYP SE G+ + D  
Sbjct: 143 QEDTKTLPPPYVHPLVKRSASSLSEKSLEICTESLGSENGSDGFSSYPPSETGEAEEDKE 202

Query: 192 --------------TTETEYPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGASVCI 251
                         T + +  D+   ++       KKS P+SFPPP+ SL S DGAS+ +
Sbjct: 203 EEQEQEEQEQEERATPKYDMEDLHVAKYNFAASATKKSSPKSFPPPLPSLSSRDGASLRM 262

Query: 252 QSRRENGRLILDAVSVPSKKNFRADRRDGRLILSFVTT-------PANLLIKESKIVEER 311
           + RR+NGRL+L+AVSVPS+ NF+A R+DGRL+L+F  +        A +   E +  E+ 
Sbjct: 263 KPRRDNGRLVLEAVSVPSQNNFQAQRQDGRLVLTFADSLNKEGQKGAEMFEIEIENSEDE 322

Query: 312 DDLEADDSEIPMD-----------------------EVARLSSSVMNFHRLAMMMKKPNG 371
            + E ++ E+ M+                       +  +LS  V+N HRLA+MM KP  
Sbjct: 323 SETETEEEEVEMEMEEAANERGRGAGGSGDVRFVMEQAPKLSGGVINVHRLALMMNKPML 382

Query: 372 FINRNPAWPKE----------KDAPEPLTPLSQSLPPRPP-------------------- 428
             NRNP WP +          ++  +P+TPL+QSLPPRPP                    
Sbjct: 383 ISNRNPTWPNKFNEVQFEEGVEEVVKPITPLTQSLPPRPPVARMIPMPSTAVAAAGTVKA 442

[Close]

BLAST of CmoCh20G001620 vs. TrEMBL
Match: A0A067LEM2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23902 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 9.5e-73
Identity = 205/500 (41.00%), Postives = 276/500 (55.20%), Query Frame = 1


Query: 12  QKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKCFSA------IKKVASSLAFS--- 71
           ++QGI++ L  SD +  T  P  LRRTLSADMSS K  S       +KK+ASS  FS   
Sbjct: 22  KQQGIVSIL-GSDSELKTNKP--LRRTLSADMSSKKWLSQNGFSSRLKKIASSKEFSVSI 81

Query: 72  LPPYSSSSEDEQDCDETIGFWSSVHEEQRKNRTECQKQGNNDDDDDSWKSILFQNSAPKS 131
           +   SSS  DE + ++    WSS+ +E++K      K  +     D W SIL Q +    
Sbjct: 82  ITDSSSSEGDEDEYEKETEVWSSIQQEKQK------KDSSPRGQFDIWSSILTQKAQEAK 141

Query: 132 SVVP--YVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGDTTETEY 191
           +++P  YVHPL+++SA SLSE SL ICTESLGSETGSDGFSSYP SE GD + D  E + 
Sbjct: 142 NLLPPPYVHPLVKRSASSLSEKSLEICTESLGSETGSDGFSSYPPSETGDAEEDKEEEQQ 201

Query: 192 PDIQTFQ--------------WKPIKFG----RKKSPPRSFPPPISSLCSPDGASVCIQS 251
            + +  +              W+ IK       KK PPR+FPPPI SL S DGAS+ ++ 
Sbjct: 202 EEEEEEEEEEEKVSKNYDMEDWQVIKCNITAASKKLPPRTFPPPIPSLSSRDGASLRMRP 261

Query: 252 RRENGRLILDAVSVPSKKNFRADRRDGRLILSFVTTPANLLIKESKIVEERDDLEADDSE 311
           RR+NGR +L+A+SVPS+ NF+A+R+DGRL+LSF+ TP        K   E   +E +DSE
Sbjct: 262 RRDNGRFVLEAISVPSQNNFKAERQDGRLVLSFIDTPDGEEEGTKKNEMELFQVEIEDSE 321

Query: 312 --------------------IPMDEVARLSSSVMNFHRLAMMMKKPNGFINRNPAW---- 371
                                 M++  +LS  ++N HRLA+M+ KP    NRN AW    
Sbjct: 322 EEEEEVNERGGGGGGGEEMRYVMEQAPKLSGGIINVHRLALMINKPTMLANRNTAWSNKF 381

Query: 372 -----------PKEKDAPEPLTPLSQSLPPRPP-------SLTAATAAT-SLNAYEYYWR 428
                       +E+  P P+ PL+QSLPPRPP           ATAAT S+NAYEYYW+
Sbjct: 382 NEVVKFEEEEEEEEEVNPNPIAPLTQSLPPRPPVGRSIPKPAAVATAATASVNAYEYYWK 441

[Close]

BLAST of CmoCh20G001620 vs. TrEMBL
Match: A0A0A0M0D7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G635920 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.2e-69
Identity = 189/434 (43.55%), Postives = 247/434 (56.91%), Query Frame = 1


Query: 1   MKTLFHDYKTLQKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKCFSAIKKVASSLA 60
           +K     Y   +KQGI+ AL SSD     + P SLRRTLSADMSS K  S +KKV+S   
Sbjct: 4   LKIFQASYSNDKKQGIVAAL-SSDSDHSQIQPSSLRRTLSADMSSHKWISHMKKVSSFQD 63

Query: 61  FSLPPYSSSSEDEQDCDETIGFWSSVHEEQRKNRTECQKQGNNDDDDDSWKSILFQNSAP 120
           F  P     +EDE    E +G WSS+ +E R      Q+  N  D               
Sbjct: 64  FHNP----KTEDET---EGVGVWSSIVKESR------QESKNISD--------------- 123

Query: 121 KSSVVPYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGDTTETEY 180
                PYVHPLL++S   LSE SL ICTESLGSETGSDGFSSYPSSE GD D +  E   
Sbjct: 124 -----PYVHPLLKRSGKCLSEKSLEICTESLGSETGSDGFSSYPSSENGDTDDENEENMI 183

Query: 181 PDIQTF----QWKPIKFGRKKSPP-RSFPPPISSLCSPDGASVCIQSRRENGRLILDAVS 240
              QTF    QWKP+K   KKSPP RS PPP+ +L  PDG ++ +Q RR+NGRL+L+A+S
Sbjct: 184 EGTQTFEVENQWKPVKISYKKSPPRRSLPPPLPTLSGPDGETLRMQPRRDNGRLVLEAMS 243

Query: 241 VPSKKNFRADRRDGRLILSFVTTPANLLIKESKIVEERDDLEADDSEIPMDEVARLSSSV 300
           VPS+ NF A R+DGRL+L+ V+   +L+ +  KI + + + E  ++E    +++     +
Sbjct: 244 VPSQNNFHAQRQDGRLVLTLVS--RHLINQVEKIDDWKMEEEGKENEQKTTKLSEFPRGL 303

Query: 301 MNFHRLA-MMMKKPNGFINRNPAWPKEKDAPEPLTPLSQSLPPRPPSLTAATAATSLNAY 360
           +  HRLA MM  K     NRNP+ P    A +P+            S  A   A SLNAY
Sbjct: 304 LTTHRLASMMSSKTIALANRNPSLPPRPKAAQPII-----------SCVAPPVAASLNAY 363

Query: 361 EYYWRSKPTGIQNLKSQQQIQPIQSITCKFISSNNQMADEKQQILNYLVPLSNG-CKVPR 420
           EYYWRSKPTG       QQ    +S + K + S N+ A+E++++   +V  SNG CK  R
Sbjct: 364 EYYWRSKPTGKAGTPVGQQQATFKSSSRKVMISKNRTANEEEKL---VVMCSNGSCKEVR 387

Query: 421 RSVLLREPCCIATT 428
           R+V+  EP CIAT+
Sbjct: 424 RTVVFWEPRCIATS 387

[Close]

BLAST of CmoCh20G001620 vs. TrEMBL
Match: B9HQ73_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s02170g PE=4 SV=2)

HSP 1 Score: 268.9 bits (686), Expect = 1.1e-68
Identity = 207/512 (40.43%), Postives = 273/512 (53.32%), Query Frame = 1


Query: 12  QKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKC-----FSAIKKVASSLAF-SLPP 71
           +KQGI++ L   D++       SLRRTLSADMSS K      F  +KK+ASS  F +   
Sbjct: 25  KKQGIVSIL-GCDVERTKSAAASLRRTLSADMSSKKWQAQHGFYPLKKIASSDHFPACDS 84

Query: 72  YSSSSEDEQDCD--------ETIGFWSSVHEEQRKNRTECQKQGNNDDDDDSWKSILFQN 131
            + SSEDE   D        +    WSS+ E+  KN+ E +K G  D     W SIL Q 
Sbjct: 85  ITDSSEDEDFEDRPKETETRDQFDIWSSIQED--KNKKEVEKPGQFD----VWSSILSQK 144

Query: 132 SAPKSS-VVPYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGDTT 191
           +   S  V PYVHPL+++SA SLSE SL ICTESLGSETG DGFSSYP SE GD + +  
Sbjct: 145 AKEDSKDVQPYVHPLVKRSASSLSEKSLEICTESLGSETGCDGFSSYPPSEIGDAEDEKE 204

Query: 192 ETEYPD--IQTFQWKPIKFGR--------KKSPPRSFPPPISSLCSPDGASVCIQSRREN 251
           E +  +   Q F  + ++  +        KKS PRSFPPPI SL S DGASV ++SRR+N
Sbjct: 205 EEQLQERVTQKFDMEDLRAAKYNLAASNSKKSQPRSFPPPIPSLSSRDGASVHMRSRRDN 264

Query: 252 GRLILDAVSVPSKKNFRADRRDGRLILSFVTTPANLLIKESKIVEERDDLEADDSEIP-- 311
           GRL+L+ VSVPS+ NF A R+DGRL+L+   T AN   +E +  EE  D+E  D EI   
Sbjct: 265 GRLVLEVVSVPSQNNFHAQRQDGRLVLTLANT-ANQEEEERQKNEEMSDVEQFDVEIENS 324

Query: 312 --------------------------------MDEVARLSSSVMNFHRLAMMMKKPNGFI 371
                                           M+E  +LSS +++ HRLA+MM K     
Sbjct: 325 EGKEEVEEEIEEGEVEDGEDKRGGGGEGVRFVMEETPKLSSGILSVHRLALMMNKSLVLA 384

Query: 372 NRNPAWPK----------EKDAPEPLTPLSQSLPPRPPSLT-----------AATAAT-- 428
           NRNPAWP           E +  +P+TP++QSLPPR P  T           AA AAT  
Sbjct: 385 NRNPAWPNKFEDMTKFGDEVEVVDPITPITQSLPPRRPPATRLIPSPPVATMAAAAATAK 444

[Close]

BLAST of CmoCh20G001620 vs. TAIR10
Match: AT5G22090.1 (AT5G22090.1 Protein of unknown function (DUF3049))

HSP 1 Score: 178.3 bits (451), Expect = 9.8e-45
Identity = 176/482 (36.51%), Postives = 235/482 (48.76%), Query Frame = 1


Query: 12  QKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKC-----FSAIKKVASSLAFSLPPY 71
           ++QGI++ L    +   T   PSLRRT SAD+SS        FS +K+++SS    L P 
Sbjct: 18  KQQGIVSIL--GGISSNTSSAPSLRRTFSADLSSKTWVSQNGFSPMKRISSSE--KLRP- 77

Query: 72  SSSSEDEQDCDETIGFWSSVHEEQRKNRTECQKQGNNDDDDDSWKSILFQNSAPKSSV-- 131
               E E++    +  W+ + +++   + E + +    D    W SIL +    +SS   
Sbjct: 78  -DEEEAEEESRSGVDIWAQIQQDKNDKKKEEEIEPGQSD---VWSSILSEKKKTESSKDT 137

Query: 132 --VPYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGD-------- 191
              PYVHPL+ K A SLSE SL ICTESLGSETG DGFSS+ SSE GD + +        
Sbjct: 138 VPPPYVHPLM-KRASSLSEKSLEICTESLGSETGCDGFSSHASSETGDAEIEIHDETNLV 197

Query: 192 --TTETEYPDIQTFQWKPIKFGRKKS----------PPRSFPPPISSLCSPDGASVCIQS 251
              TET+  +I   +   I   ++ S          PP SFPPPI SL S  G+S+ +++
Sbjct: 198 VNVTETKVEEITETE---IVVEQESSIIVPNHIIELPPGSFPPPIRSLSSQSGSSLHMKT 257

Query: 252 RRENGRLILDAVSVPSKKNFRADRRDGRLILSF--VTTPANLLIKESKI---------VE 311
           RR+NGRL+L+AVS+PS  NF A R+DGRL+L+F  ++   N   KE +I          E
Sbjct: 258 RRDNGRLVLEAVSMPSHNNFSAKRQDGRLLLTFAEISNEPN-YDKEDEIDSEVQWFDEEE 317

Query: 312 ERDDLEADDSEIPMDEVARLSSSVM----------NFHRLAMMMKKPNGFINRNPAWP-- 371
           E ++ E D+ E   DE A   + ++            HRLA    KP G   RN  WP  
Sbjct: 318 EEEEEEEDEEEEAPDEFAYKPNGLLYKMAQKPIPITVHRLA---HKPIGVPKRNSRWPMA 377

Query: 372 KEKDAPEPL-TPLSQSLPPR-----------PPSLTAAT-AATSLNAYEYYWRSKPTGI- 427
            E D    L TP+  SLPPR           PPS    T  A   N  +Y W+S  T   
Sbjct: 378 DEFDTKSDLSTPVVHSLPPRPRVAQLARSTKPPSTVDDTVGAACFNTCDYSWKSTNTESF 437

[Close]

BLAST of CmoCh20G001620 vs. TAIR10
Match: AT5G19260.1 (AT5G19260.1 Protein of unknown function (DUF3049))

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-12
Identity = 58/209 (27.75%), Postives = 98/209 (46.89%), Query Frame = 1


Query: 85  SVHEEQRKNRTECQKQGNNDDDDDSWKSILFQNSAPKSSVVPYVHPLLQKSAH------- 144
           S H E  +NR + +   +   D   W S+   +S   SS         + S +       
Sbjct: 46  SSHAEDTRNRNDDKAAASPVSDSSGWSSLQSLSSGSSSSTKTTTSSEKESSYYVQRPSSC 105

Query: 145 -SLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGDTTETEYPDIQTFQWKPIKFGRK 204
            +LS+ SL +CTE+LGSE+GSD       ++  +      +T+     T + + +K  ++
Sbjct: 106 RALSDQSLALCTENLGSESGSD------VTDIDELFSLDVQTKNLGETTTETRTLKSRKR 165

Query: 205 KSPPRSFPPPISSLCSPDGASVCIQSR--RENGRLILDAVSVPSKKN-FRADRRDGRLIL 264
              P   PPP++++        CIQ R  RENGRL++ A + P +   F+ADR +GRL L
Sbjct: 166 SVSPSDLPPPLTTM----RGFQCIQMRPHRENGRLVMTATNAPPRNGCFQADRSNGRLRL 225

Query: 265 SFVTTPANLLIKESKIVEERDDLEADDSE 283
           S +      +  E + +E  +  E ++ E
Sbjct: 226 SILKDSNEFVENEEETIEPEETEEYEEEE 244

[Close]

BLAST of CmoCh20G001620 vs. TAIR10
Match: AT3G06020.1 (AT3G06020.1 Protein of unknown function (DUF3049))

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-11
Identity = 61/194 (31.44%), Postives = 94/194 (48.45%), Query Frame = 1


Query: 102 NNDDDDDSWKSILFQNSAPKSSVVPYVHPLLQK--SAHSLSENSLLICTESLGSETGSDG 161
           N+D +  SW  +   +++  +       PL Q   S  +LS+ SL +CTESLGSETGSD 
Sbjct: 69  NSDTNSGSWSFLESLSNSSSNDKEKKTLPLFQSPSSRRTLSDESLALCTESLGSETGSDI 128

Query: 162 FSS---YPSSEFGDFDGDTTETEYPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGA 221
                   SSE    +  TT T           P +  RK++   S PPP++S+   D  
Sbjct: 129 IHEDMFSISSELQTMETRTTSTTS--------NPSRQDRKRNTMASLPPPLTSMIGFD-- 188

Query: 222 SVCIQSRRENGRLILDAVSVPSKKNFRADRRDGRLILSFVTTPANLL---IKESKIVEER 281
            + ++S RENGRL++ A   P +     DR +G + L+ +    + +    KE K  EE 
Sbjct: 189 CIEVKSHRENGRLVMMATRPPPRNRCLQDRSNGCVRLAILIDSDDHIETETKEEKEEEEE 248

Query: 282 DDLEA---DDSEIP 285
           + +E    ++ EIP
Sbjct: 249 ETIETVRDNEEEIP 252

[Close]

BLAST of CmoCh20G001620 vs. TAIR10
Match: AT1G03170.1 (AT1G03170.1 Protein of unknown function (DUF3049))

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-08
Identity = 64/201 (31.84%), Postives = 96/201 (47.76%), Query Frame = 1


Query: 97  CQKQGNND--DDDDSWKSILFQNSAPKSSVVP------YVHPLLQKSAHSLSENSLLICT 156
           CQ Q N      DD       Q+ +  +S+        YVHP+ ++S   L+E SL +CT
Sbjct: 6   CQPQINESFYQKDDMGGLSFLQSMSDITSIAQTKEDKAYVHPMEKRSVSKLNEKSLEMCT 65

Query: 157 ESLGSETGSDGFSSYPSSEFGDFDGDTTETEYPDIQTFQWKPIKFGR--KKSPP----RS 216
           ESLG+ETGS+   S        F+  TT    P     Q KP +      K+PP     S
Sbjct: 66  ESLGTETGSE---SGDELSLLAFEATTT----PRAPPRQLKPQEDTNLPDKTPPMSRNNS 125

Query: 217 FPPPISSLCSPDGASVCIQSRRENGRLILDAVSVPSKKN-FRADRRDGRLILSFVTTPAN 276
           FPPPI         +  ++   E+GR+++ A+ V S  + F ++R +GRL L  +T+ ++
Sbjct: 126 FPPPI-KFVEDSKYNRMVRWLGEDGRIVVQAIRVSSPPSCFVSERGEGRLRL-ILTSESS 185

Query: 277 LLIKESKIVEERDDLEADDSE 283
           LL    +  EE +  E  D E
Sbjct: 186 LLSHNHEEEEEEETEEGIDEE 197

[Close]

BLAST of CmoCh20G001620 vs. TAIR10
Match: AT4G02810.1 (AT4G02810.1 Protein of unknown function (DUF3049))

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-08
Identity = 57/199 (28.64%), Postives = 99/199 (49.75%), Query Frame = 1


Query: 99  KQGNNDDDDDSWKSILF--------QNSAPKSSVVPYVHPLLQKSAHSLSENSLLICTES 158
           KQ + + D   W  + +        QN    +    YV+P+ ++S   +++ SL +CTES
Sbjct: 14  KQVSQNPDVGGWSFLQYFSEPKGIVQNREDDTKKTAYVYPIEKRS---VAKLSLEMCTES 73

Query: 159 LGSETGSDGFSSYPSSEFGDFDGDTTE-TEYPDIQTFQWKPIKFGRKKSPPRSFPPPISS 218
           LG+E GSD        E      + T  ++ P + T   K   F  +++   SFPPP++S
Sbjct: 74  LGTENGSDS-----GDEMSLLALEATNISKSPRLTTKPQKETSFMTREN---SFPPPLNS 133

Query: 219 LCSPDGASVCIQSRRENGRLILDAVSVPS-KKNFRADRRDGRLILSFVTTPANLLIKESK 278
           +   + + + ++S +E+GRL++ A+ V S  + F ++RR+GRL L       N    E +
Sbjct: 134 VNGFNNSRM-VKSYKEDGRLVVQAIRVCSPPRCFVSERREGRLRLCLSQNSLNSQDAEEE 193

Query: 279 IVEERDDLEADDSEIPMDE 288
             EE +D + D  E   +E
Sbjct: 194 FEEEDEDDQYDAEEEEEEE 200

[Close]

BLAST of CmoCh20G001620 vs. NCBI nr
Match: gi|449445011|ref|XP_004140267.1| (PREDICTED: protein FAF-like, chloroplastic [Cucumis sativus])

HSP 1 Score: 515.4 bits (1326), Expect = 9.6e-143
Identity = 302/465 (64.95%), Postives = 334/465 (71.83%), Query Frame = 1


Query: 1   MKTLFHDYKTLQKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKCFSAIKKVASSLA 60
           MKTL H+Y +LQKQGILT LPSSD  +P+LPPPSLRRTLSADMSS+K  S IKK+ SS A
Sbjct: 1   MKTL-HNYNSLQKQGILTILPSSDHHYPSLPPPSLRRTLSADMSSTKWCSPIKKIPSSQA 60

Query: 61  FSLPPYSSSSEDEQDCDETIGFWSSVHEEQRKNRTECQKQGNNDDDDDSWKSILFQNSA- 120
           F                         H+    N+ +  K G +  D   W SIL  NS  
Sbjct: 61  F-------------------------HDNSNNNKIDSSKHGVH--DSVPWSSILLHNSVS 120

Query: 121 ---PKSSVV--PYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGD 180
              PKS VV  PYVHPLL+K++HSLS+ SL ICTESLGSETGSDGFSSYPSSE GDFD  
Sbjct: 121 DDPPKSPVVAAPYVHPLLKKTSHSLSDISLQICTESLGSETGSDGFSSYPSSEDGDFDRL 180

Query: 181 TTETEYPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGASVCIQSRRENGRLILDAV 240
            TET+Y +I TF+WKP+KF RKKSPPRSFPPPISSL SPDG S+CIQSRRE+GRL+LDAV
Sbjct: 181 ITETDYSEIDTFEWKPVKFSRKKSPPRSFPPPISSLDSPDGVSICIQSRREDGRLMLDAV 240

Query: 241 SVPSKKNFRADRRDGRLILSFVTTPANLL-----------------IKESKIVEERDD-- 300
           SVPS+KNFRA+RRDGRLILS   TP NLL                 +KES+IVE  +D  
Sbjct: 241 SVPSRKNFRAERRDGRLILSLFRTPENLLVNEEEELEEMIAGEFEEVKESEIVEVGNDEN 300

Query: 301 -LEADDSEIPMDEVARLSSSVMNFHRLAMMMKKPNGFINRNPAWPKEKDAPE-PLTPLSQ 360
            LE ++ EIP+++  RLSSSVMNFHRL  MMKK NG INRNPAWPKEKDA E P TPLSQ
Sbjct: 301 VLEVEELEIPIEKTPRLSSSVMNFHRLTNMMKKTNGLINRNPAWPKEKDASETPTTPLSQ 360

Query: 361 SLPPRPPSLTAATAATSLNAYEYYWRSKPT----GIQNLKSQQQIQPIQSITCKFISSNN 420
           SLPPRPPSLTAATA T LNAYEYYWRSKPT    GIQN   QQQ Q    IT K ISSNN
Sbjct: 361 SLPPRPPSLTAATAGTFLNAYEYYWRSKPTGKSAGIQNPNGQQQTQ----ITRKLISSNN 420

Query: 421 QMADEKQQIL-------NYLVPLSNGCKVPRRSVLLREPCCIATT 428
           QMADEKQQIL       +YLVPLSNGCKVPRRSVLLREPCCIATT
Sbjct: 421 QMADEKQQILVLKGNRGDYLVPLSNGCKVPRRSVLLREPCCIATT 433

[Close]

BLAST of CmoCh20G001620 vs. NCBI nr
Match: gi|659097390|ref|XP_008449599.1| (PREDICTED: protein FAF-like, chloroplastic [Cucumis melo])

HSP 1 Score: 497.7 bits (1280), Expect = 2.1e-137
Identity = 302/483 (62.53%), Postives = 334/483 (69.15%), Query Frame = 1


Query: 1   MKTLFHDYKTLQKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKCFSAIKKVASSLA 60
           MKTL H Y +LQ+QGILT LPSSD  +P+LPPPSLRRTLSADMSS+K  S IKK+ SS A
Sbjct: 1   MKTL-HSYNSLQQQGILTILPSSDHHYPSLPPPSLRRTLSADMSSTKWCSPIKKIPSSQA 60

Query: 61  FSLPPYSSSSEDEQDCDETIGFWSSVHEEQRKNRTECQKQG----NNDDDDD-----SWK 120
           F                               N+ EC KQG    ++DDDDD     SW 
Sbjct: 61  F-----------------------------HHNKIECSKQGVVVVDDDDDDDDDDSVSWS 120

Query: 121 SILFQNSA----PKSSVV-------PYVHPLLQKSAHSLSENSLLICTESLGSETGSDGF 180
           SIL  NS     PKSSVV       PYVHPLL+K++HSLS+ SL ICTESLGSETGSDGF
Sbjct: 121 SILLHNSLSDDPPKSSVVAAPPPPPPYVHPLLKKTSHSLSDISLQICTESLGSETGSDGF 180

Query: 181 SSYPSSEFGDFDGDTTETEYPD-IQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGASVC 240
           SSYPSSE GDFDG  TET+  D I TF+WKP+KF RKKSPPRSFPP ISSL SPDG S+ 
Sbjct: 181 SSYPSSEDGDFDGLMTETDCSDDIDTFEWKPVKFSRKKSPPRSFPPLISSLDSPDGVSIG 240

Query: 241 IQSRRENGRLILDAVSVPSKKNFRADRRDGRLILSFVTTPANLL---------------- 300
           IQSRR++GRLILDAVSVPS+KNFRA+RRDGRLILS  TTPANLL                
Sbjct: 241 IQSRRKDGRLILDAVSVPSRKNFRAERRDGRLILSLFTTPANLLVKEEEEEELEELIAGE 300

Query: 301 ---IKESKIVE---ERDDLEADDSEIPMDEVARLSSSVMNFHRLAMMMKKPNGFINRNPA 360
              +KES+IVE   + + LE ++ EIP+++  RLSSSVMNFHRL  MMKK NG INRNP 
Sbjct: 301 FEEVKESEIVEVGNDENSLEVEELEIPIEKTPRLSSSVMNFHRLTNMMKKTNGLINRNPT 360

Query: 361 WPKEKDAPE--PLTPLSQSLPPRPPSLTAATAATSLNAYEYYWRSKPT----GIQNLKSQ 420
           W  EKD  E    TPLSQSLPPRPPSLTAATA + LNAYEYYWRSKPT    GIQN   Q
Sbjct: 361 WTNEKDGLETPTTTPLSQSLPPRPPSLTAATAGSFLNAYEYYWRSKPTGKSAGIQNPNGQ 420

Query: 421 QQIQPIQSITCKFISSNNQMADEKQQIL-------NYLVPLSNGCKVPRRSVLLREPCCI 428
           QQ Q    IT K ISSNNQM DEKQQIL       +YLVPLSNGCKVPRRSVLLREPCCI
Sbjct: 421 QQTQ----ITRKLISSNNQMTDEKQQILVLKGNRGDYLVPLSNGCKVPRRSVLLREPCCI 449

[Close]

BLAST of CmoCh20G001620 vs. NCBI nr
Match: gi|255545349|ref|XP_002513735.1| (PREDICTED: protein FAF-like, chloroplastic [Ricinus communis])

HSP 1 Score: 283.9 bits (725), Expect = 4.7e-73
Identity = 208/528 (39.39%), Postives = 277/528 (52.46%), Query Frame = 1


Query: 12  QKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKC-----FSAIKKVASSLAF----- 71
           +KQGI++ L  SD +  T   PSLRRTLSADMSS K      FS +KK+ASS  F     
Sbjct: 23  KKQGIVSIL-GSDYE-RTKSAPSLRRTLSADMSSKKWQSQHGFSPLKKIASSGEFPISIT 82

Query: 72  ---SLPPYSSSSEDEQDCDETIGFWSSVHEEQRKNRTECQKQGNNDDDDDSWKSILFQNS 131
              S  P S   E E++       WSS+ EE+ K      K   N    D W SIL Q +
Sbjct: 83  DSSSSSPSSLEGEYERESRGRFEIWSSIQEEKEK------KDQENPGQFDIWSSILTQKA 142

Query: 132 APKSSVVP--YVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGD-- 191
              +  +P  YVHPL+++SA SLSE SL ICTESLGSE GSDGFSSYP SE G+ + D  
Sbjct: 143 QEDTKTLPPPYVHPLVKRSASSLSEKSLEICTESLGSENGSDGFSSYPPSETGEAEEDKE 202

Query: 192 --------------TTETEYPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGASVCI 251
                         T + +  D+   ++       KKS P+SFPPP+ SL S DGAS+ +
Sbjct: 203 EEQEQEEQEQEERATPKYDMEDLHVAKYNFAASATKKSSPKSFPPPLPSLSSRDGASLRM 262

Query: 252 QSRRENGRLILDAVSVPSKKNFRADRRDGRLILSFVTT-------PANLLIKESKIVEER 311
           + RR+NGRL+L+AVSVPS+ NF+A R+DGRL+L+F  +        A +   E +  E+ 
Sbjct: 263 KPRRDNGRLVLEAVSVPSQNNFQAQRQDGRLVLTFADSLNKEGQKGAEMFEIEIENSEDE 322

Query: 312 DDLEADDSEIPMD-----------------------EVARLSSSVMNFHRLAMMMKKPNG 371
            + E ++ E+ M+                       +  +LS  V+N HRLA+MM KP  
Sbjct: 323 SETETEEEEVEMEMEEAANERGRGAGGSGDVRFVMEQAPKLSGGVINVHRLALMMNKPML 382

Query: 372 FINRNPAWPKE----------KDAPEPLTPLSQSLPPRPP-------------------- 428
             NRNP WP +          ++  +P+TPL+QSLPPRPP                    
Sbjct: 383 ISNRNPTWPNKFNEVQFEEGVEEVVKPITPLTQSLPPRPPVARMIPMPSTAVAAAGTVKA 442

[Close]

BLAST of CmoCh20G001620 vs. NCBI nr
Match: gi|802562391|ref|XP_012066343.1| (PREDICTED: protein FAF-like, chloroplastic [Jatropha curcas])

HSP 1 Score: 282.3 bits (721), Expect = 1.4e-72
Identity = 205/500 (41.00%), Postives = 276/500 (55.20%), Query Frame = 1


Query: 12  QKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKCFSA------IKKVASSLAFS--- 71
           ++QGI++ L  SD +  T  P  LRRTLSADMSS K  S       +KK+ASS  FS   
Sbjct: 22  KQQGIVSIL-GSDSELKTNKP--LRRTLSADMSSKKWLSQNGFSSRLKKIASSKEFSVSI 81

Query: 72  LPPYSSSSEDEQDCDETIGFWSSVHEEQRKNRTECQKQGNNDDDDDSWKSILFQNSAPKS 131
           +   SSS  DE + ++    WSS+ +E++K      K  +     D W SIL Q +    
Sbjct: 82  ITDSSSSEGDEDEYEKETEVWSSIQQEKQK------KDSSPRGQFDIWSSILTQKAQEAK 141

Query: 132 SVVP--YVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGDTTETEY 191
           +++P  YVHPL+++SA SLSE SL ICTESLGSETGSDGFSSYP SE GD + D  E + 
Sbjct: 142 NLLPPPYVHPLVKRSASSLSEKSLEICTESLGSETGSDGFSSYPPSETGDAEEDKEEEQQ 201

Query: 192 PDIQTFQ--------------WKPIKFG----RKKSPPRSFPPPISSLCSPDGASVCIQS 251
            + +  +              W+ IK       KK PPR+FPPPI SL S DGAS+ ++ 
Sbjct: 202 EEEEEEEEEEEKVSKNYDMEDWQVIKCNITAASKKLPPRTFPPPIPSLSSRDGASLRMRP 261

Query: 252 RRENGRLILDAVSVPSKKNFRADRRDGRLILSFVTTPANLLIKESKIVEERDDLEADDSE 311
           RR+NGR +L+A+SVPS+ NF+A+R+DGRL+LSF+ TP        K   E   +E +DSE
Sbjct: 262 RRDNGRFVLEAISVPSQNNFKAERQDGRLVLSFIDTPDGEEEGTKKNEMELFQVEIEDSE 321

Query: 312 --------------------IPMDEVARLSSSVMNFHRLAMMMKKPNGFINRNPAW---- 371
                                 M++  +LS  ++N HRLA+M+ KP    NRN AW    
Sbjct: 322 EEEEEVNERGGGGGGGEEMRYVMEQAPKLSGGIINVHRLALMINKPTMLANRNTAWSNKF 381

Query: 372 -----------PKEKDAPEPLTPLSQSLPPRPP-------SLTAATAAT-SLNAYEYYWR 428
                       +E+  P P+ PL+QSLPPRPP           ATAAT S+NAYEYYW+
Sbjct: 382 NEVVKFEEEEEEEEEVNPNPIAPLTQSLPPRPPVGRSIPKPAAVATAATASVNAYEYYWK 441

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BLAST of CmoCh20G001620 vs. NCBI nr
Match: gi|743902511|ref|XP_011044595.1| (PREDICTED: protein FAF-like, chloroplastic [Populus euphratica])

HSP 1 Score: 274.2 bits (700), Expect = 3.7e-70
Identity = 211/513 (41.13%), Postives = 276/513 (53.80%), Query Frame = 1


Query: 12  QKQGILTALPSSDLQFPTLPPPSLRRTLSADMSSSKC-----FSAIKKVASSLAFSLPPY 71
           ++QGI++ L  SD++       SLRRTLSADMSS K      F  +KK+ASS  F     
Sbjct: 24  KRQGIVSIL-GSDVEGNKSAAASLRRTLSADMSSKKWQAQHGFYPLKKIASSDHFPACNI 83

Query: 72  --SSSSEDEQ--------DCDETIGFWSSVHEEQRKNRTECQKQGNNDDDDDSWKSILFQ 131
             SSSSEDE         +       WSS+ E++  N+ E +K G  D     W SIL Q
Sbjct: 84  TDSSSSEDEDYEDRPKATEAQGKFDIWSSIQEDE--NKKEVEKPGQFD----VWSSILSQ 143

Query: 132 NSAPKS-SVVPYVHPLLQKSAHSLSENSLLICTESLGSETGSDGFSSYPSSEFGDFDGD- 191
            +   S +V PYVHPL+++SA SLSE SL ICTESLGSETGSDGFSSYP SE GD + D 
Sbjct: 144 KTKEDSKNVQPYVHPLVKRSASSLSEKSLEICTESLGSETGSDGFSSYPPSETGDAEEDK 203

Query: 192 ---------TTETEYPDIQTFQWKPIKFGRKKSPPRSFPPPISSLCSPDGASVCIQSRRE 251
                    T + +  D++  ++       KKS PRSFPPPI SL + DGASV ++SRR+
Sbjct: 204 EEEQRQERVTLKFDTEDLRVAKYNLAAANCKKSQPRSFPPPIPSLSTRDGASVHMKSRRD 263

Query: 252 NGRLILDAVSVPSKKNFRADRRDGRLILSFVTT------------PANLLIK-------- 311
           NGRL+L+AVSVPS KNF A R+DGRL+L+FV T              N++ +        
Sbjct: 264 NGRLVLEAVSVPSHKNFHAQRQDGRLVLTFVNTVDQDEEERQKNEEKNVMGQFDFEFENS 323

Query: 312 ---------ESKIVEERDDLEADDSE----------IPMDEVARLSSSVMNFHRLAMMMK 371
                    E ++ EE ++   +D E            M+E  +LSS V   HRLA+MM 
Sbjct: 324 KDEKECEEDEEEVEEEIEEDVVEDGENERGGDEGARFVMEEAPKLSSGVTRVHRLALMMD 383

Query: 372 KPNGFINRNPAWPKEKD------APEPLTPLSQSLPPRP------PSLTAAT-------- 428
           K + F NRNP WP + +        EP+T L+QSLPPRP      PS  AAT        
Sbjct: 384 KSSVFANRNPTWPHKFNDIAKFGEVEPITSLTQSLPPRPPVARMIPSSPAATMAATEVTA 443

The following BLAST results are available for this feature:

BLAST of CmoCh20G001620 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FAFL_ARATH	1.7e-43	36.51	Protein FAF-like, chloroplastic OS=Arabidopsis thaliana GN=At5g22090 PE=2 SV=1	[more]
FAF3_ARATH	2.3e-11	27.75	Protein FANTASTIC FOUR 3 OS=Arabidopsis thaliana GN=FAF3 PE=2 SV=1	[more]
FAF4_ARATH	1.9e-10	31.44	Protein FANTASTIC FOUR 4 OS=Arabidopsis thaliana GN=FAF4 PE=2 SV=1	[more]
FAF2_ARATH	2.0e-07	31.84	Protein FANTASTIC FOUR 2 OS=Arabidopsis thaliana GN=FAF2 PE=2 SV=1	[more]
FAF1_ARATH	2.0e-07	28.64	Protein FANTASTIC FOUR 1 OS=Arabidopsis thaliana GN=FAF1 PE=2 SV=1	[more]

BLAST of CmoCh20G001620 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI67_CUCSA	6.7e-143	64.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G426380 PE=4 SV=1	[more]
B9RJ16_RICCO	3.3e-73	39.39	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1756120 PE=4 SV=1	[more]
A0A067LEM2_JATCU	9.5e-73	41.00	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23902 PE=4 SV=1	[more]
A0A0A0M0D7_CUCSA	2.2e-69	43.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G635920 PE=4 SV=1	[more]
B9HQ73_POPTR	1.1e-68	40.43	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s02170g PE=4 SV=2	[more]

BLAST of CmoCh20G001620 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22090.1	9.8e-45	36.51	Protein of unknown function (DUF3049)	[more]
AT5G19260.1	1.3e-12	27.75	Protein of unknown function (DUF3049)	[more]
AT3G06020.1	1.1e-11	31.44	Protein of unknown function (DUF3049)	[more]
AT1G03170.1	1.1e-08	31.84	Protein of unknown function (DUF3049)	[more]
AT4G02810.1	1.1e-08	28.64	Protein of unknown function (DUF3049)	[more]

BLAST of CmoCh20G001620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445011\|ref\|XP_004140267.1\|	9.6e-143	64.95	PREDICTED: protein FAF-like, chloroplastic [Cucumis sativus]	[more]
gi\|659097390\|ref\|XP_008449599.1\|	2.1e-137	62.53	PREDICTED: protein FAF-like, chloroplastic [Cucumis melo]	[more]
gi\|255545349\|ref\|XP_002513735.1\|	4.7e-73	39.39	PREDICTED: protein FAF-like, chloroplastic [Ricinus communis]	[more]
gi\|802562391\|ref\|XP_012066343.1\|	1.4e-72	41.00	PREDICTED: protein FAF-like, chloroplastic [Jatropha curcas]	[more]
gi\|743902511\|ref\|XP_011044595.1\|	3.7e-70	41.13	PREDICTED: protein FAF-like, chloroplastic [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021410	FAF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G001620.1	CmoCh20G001620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021410	The fantastic four family	PFAM	PF11250	FAF	coord: 202..255 score: 1.8
None	No IPR available	PANTHER	PTHR33155	FAMILY NOT NAMED	coord: 10..65 score: 2.8E-35coord: 87..291 score: 2.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh20G001620	Cucsa.185920	Cucumber (Gy14) v1	cgycmoB0532
CmoCh20G001620	CmaCh20G001450	Cucurbita maxima (Rimu)	cmacmoB550
CmoCh20G001620	CmaCh02G013030	Cucurbita maxima (Rimu)	cmacmoB607
CmoCh20G001620	Cla008617	Watermelon (97103) v1	cmowmB520
CmoCh20G001620	Csa6G426380	Cucumber (Chinese Long) v2	cmocuB552
CmoCh20G001620	MELO3C014521	Melon (DHL92) v3.5.1	cmomeB509
CmoCh20G001620	ClCG02G022450	Watermelon (Charleston Gray)	cmowcgB490
CmoCh20G001620	CSPI06G23440	Wild cucumber (PI 183967)	cmocpiB557
CmoCh20G001620	Lsi10G011350	Bottle gourd (USVL1VR-Ls)	cmolsiB484
CmoCh20G001620	Cp4.1LG16g08220	Cucurbita pepo (Zucchini)	cmocpeB517
CmoCh20G001620	Cp4.1LG05g04450	Cucurbita pepo (Zucchini)	cmocpeB535
CmoCh20G001620	MELO3C014521.2	Melon (DHL92) v3.6.1	cmomedB585
CmoCh20G001620	CsaV3_6G038580	Cucumber (Chinese Long) v3	cmocucB0659
CmoCh20G001620	Cla97C02G048530	Watermelon (97103) v2	cmowmbB557
CmoCh20G001620	Bhi10G000149	Wax gourd	cmowgoB0687
CmoCh20G001620	CsGy6G022740	Cucumber (Gy14) v2	cgybcmoB777
CmoCh20G001620	Carg02657	Silver-seed gourd	carcmoB1236
CmoCh20G001620	Carg18409	Silver-seed gourd	carcmoB0559

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh20G001620	CmoCh02G013440	Cucurbita moschata (Rifu)	cmocmoB405

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh20G001620	Watermelon (97103) v2	cmowmbB541
CmoCh20G001620	Cucurbita moschata (Rifu)	cmocmoB210
CmoCh20G001620	Cucurbita moschata (Rifu)	cmocmoB423
CmoCh20G001620	Watermelon (Charleston Gray)	cmowcgB473
CmoCh20G001620	Cucurbita pepo (Zucchini)	cmocpeB523
CmoCh20G001620	Cucurbita pepo (Zucchini)	cmocpeB540
CmoCh20G001620	Bottle gourd (USVL1VR-Ls)	cmolsiB507
CmoCh20G001620	Cucumber (Gy14) v2	cgybcmoB361
CmoCh20G001620	Melon (DHL92) v3.6.1	cmomedB583