Cp4.1LG05g04110 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g04110
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLate embryogenesis abundant hydroxyproline-rich glycoprotein
LocationCp4.1LG05 : 2308854 .. 2309411 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAAAAGCGTAGCTGGAGCTGGAGCTGGGGGTCCGCCCTAGTCGGAGCAGCGTCGGCGATTGCAGCGACAGCGATCGTTTCCGCCAAGCCCAAGGACCCAACCTTCCACCTTATCTCAATTAAGTTCACTTCCTTCAAGCTGAAGCCGCCGGTAGTTGACGCCGAGCTCATCCTGACCGTCCACGTCACCAACCCCAACGTGGCCCCCATCCACTACTCCTCTACCTCCATGTCCATTTTCTACGACGGCTCCCTCCTCGGCTCGGCCCAGGTCGACGCCGGTTCGCAGCAGGCCCGGTCCTGTCAGGTCCTCCGCCTCCCAGCCCGACTCGACGGCCTGAAGCTGGCCCACAACGGCAGCCGGTTCATCTCCGACGTCATGAAACGAGAAATGGTTCTGGATGCGAGTGTGGATATTGGGGGAATTGCAAGAGTGCTTTGGTGGAGTCACAAGTTCAAGGTCCACGTGGACAGCCATCTCATCGTTGATCCCGTCTTCCTCGATGTGCTTGATCAGGAAAACACTTCCCAACTTGAGCTGTTTCTTTCTTGA

mRNA sequence

ATGGAGAAAAAGCGTAGCTGGAGCTGGAGCTGGGGGTCCGCCCTAGTCGGAGCAGCGTCGGCGATTGCAGCGACAGCGATCGTTTCCGCCAAGCCCAAGGACCCAACCTTCCACCTTATCTCAATTAAGTTCACTTCCTTCAAGCTGAAGCCGCCGGTAGTTGACGCCGAGCTCATCCTGACCGTCCACGTCACCAACCCCAACGTGGCCCCCATCCACTACTCCTCTACCTCCATGTCCATTTTCTACGACGGCTCCCTCCTCGGCTCGGCCCAGGTCGACGCCGGTTCGCAGCAGGCCCGGTCCTGTCAGGTCCTCCGCCTCCCAGCCCGACTCGACGGCCTGAAGCTGGCCCACAACGGCAGCCGGTTCATCTCCGACGTCATGAAACGAGAAATGGTTCTGGATGCGAGTGTGGATATTGGGGGAATTGCAAGAGTGCTTTGGTGGAGTCACAAGTTCAAGGTCCACGTGGACAGCCATCTCATCGTTGATCCCGTCTTCCTCGATGTGCTTGATCAGGAAAACACTTCCCAACTTGAGCTGTTTCTTTCTTGA

Coding sequence (CDS)

ATGGAGAAAAAGCGTAGCTGGAGCTGGAGCTGGGGGTCCGCCCTAGTCGGAGCAGCGTCGGCGATTGCAGCGACAGCGATCGTTTCCGCCAAGCCCAAGGACCCAACCTTCCACCTTATCTCAATTAAGTTCACTTCCTTCAAGCTGAAGCCGCCGGTAGTTGACGCCGAGCTCATCCTGACCGTCCACGTCACCAACCCCAACGTGGCCCCCATCCACTACTCCTCTACCTCCATGTCCATTTTCTACGACGGCTCCCTCCTCGGCTCGGCCCAGGTCGACGCCGGTTCGCAGCAGGCCCGGTCCTGTCAGGTCCTCCGCCTCCCAGCCCGACTCGACGGCCTGAAGCTGGCCCACAACGGCAGCCGGTTCATCTCCGACGTCATGAAACGAGAAATGGTTCTGGATGCGAGTGTGGATATTGGGGGAATTGCAAGAGTGCTTTGGTGGAGTCACAAGTTCAAGGTCCACGTGGACAGCCATCTCATCGTTGATCCCGTCTTCCTCGATGTGCTTGATCAGGAAAACACTTCCCAACTTGAGCTGTTTCTTTCTTGA

Protein sequence

MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVVDAELILTVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHNGSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLIVDPVFLDVLDQENTSQLELFLS
Homology
[Close]
BLAST of Cp4.1LG05g04110 vs. TrEMBL
Match: A0A0A0KGW5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G425170 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 2.7e-88
Identity = 170/185 (91.89%), Postives = 177/185 (95.68%), Query Frame = 1 

Query: 1   MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVVDAELIL 60
           M KKR+WSW+  SALVGAASAIAATAI+SAKPKDPTFHLISIKFTSFKLKPPVVD ELIL
Sbjct: 40  MGKKRNWSWT--SALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELIL 99

Query: 61  TVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHN 120
           TVHVTNPNVAPIHYSST+MSIFY+GSLLGSAQVDAGSQQ RSCQVLRLPARLDGLKLAH+
Sbjct: 100 TVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHH 159

Query: 121 GSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLIVDPVFLDVLDQENTSQL 180
           GSRFISDV KREMVLDASVDIGG ARVLWWSHKFKVHVDSHL VDPVFLDVLDQENTSQL
Sbjct: 160 GSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL 219

Query: 181 ELFLS 186
           ELFL+
Sbjct: 220 ELFLN 222

[Close]
BLAST of Cp4.1LG05g04110 vs. TrEMBL
Match: A0A0S3SBZ9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G164300 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 5.4e-73
Identity = 139/183 (75.96%), Postives = 160/183 (87.43%), Query Frame = 1 

Query: 1   MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVVDAELIL 60
           M KK  WSWS  SA++GAASA+AATA++SAKPKDPTFHLISI  TS KL  P++DAE++L
Sbjct: 1   MGKKVKWSWS--SAIIGAASAVAATALISAKPKDPTFHLISISMTSLKLNLPLLDAEVLL 60

Query: 61  TVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHN 120
           TVHVTNPN+API YSSTSMSIFY+GSLLGSAQV AGSQ  RSCQ+LRLPARL GL+LAH+
Sbjct: 61  TVHVTNPNIAPIDYSSTSMSIFYEGSLLGSAQVQAGSQPPRSCQLLRLPARLHGLQLAHH 120

Query: 121 GSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLIVDPVFLDVLDQENTSQL 180
             RF+ DV +REMVLDASVDI GIARV+WW H FKVHVDSH+ VDPVFLDV+DQENTS+L
Sbjct: 121 AKRFLQDVARREMVLDASVDIAGIARVMWWDHNFKVHVDSHVTVDPVFLDVIDQENTSEL 180

Query: 181 ELF 184
           E+F
Sbjct: 181 EVF 181

[Close]
BLAST of Cp4.1LG05g04110 vs. TrEMBL
Match: A0A0L9V6C7_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g136500 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 5.4e-73
Identity = 139/183 (75.96%), Postives = 160/183 (87.43%), Query Frame = 1 

Query: 1   MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVVDAELIL 60
           M KK  WSWS  SA++GAASA+AATA++SAKPKDPTFHLISI  TS KL  P++DAE++L
Sbjct: 1   MGKKVKWSWS--SAIIGAASAVAATALISAKPKDPTFHLISISMTSLKLNLPLLDAEVLL 60

Query: 61  TVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHN 120
           TVHVTNPN+API YSSTSMSIFY+GSLLGSAQV AGSQ  RSCQ+LRLPARL GL+LAH+
Sbjct: 61  TVHVTNPNIAPIDYSSTSMSIFYEGSLLGSAQVQAGSQPPRSCQLLRLPARLHGLQLAHH 120

Query: 121 GSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLIVDPVFLDVLDQENTSQL 180
             RF+ DV +REMVLDASVDI GIARV+WW H FKVHVDSH+ VDPVFLDV+DQENTS+L
Sbjct: 121 AKRFLQDVARREMVLDASVDIAGIARVMWWDHNFKVHVDSHVTVDPVFLDVIDQENTSEL 180

Query: 181 ELF 184
           E+F
Sbjct: 181 EVF 181

[Close]
BLAST of Cp4.1LG05g04110 vs. TrEMBL
Match: W9QJ47_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022324 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.2e-72
Identity = 140/185 (75.68%), Postives = 159/185 (85.95%), Query Frame = 1 

Query: 1   MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVVDAELIL 60
           M KK  WSWS  SAL+GAASA+AATA++ AKPKDPTFHLISI  TSFKL  PV+DAELIL
Sbjct: 1   MGKKVKWSWS--SALIGAASAVAATALIGAKPKDPTFHLISINLTSFKLNLPVLDAELIL 60

Query: 61  TVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHN 120
           TVHVTNPN++PIHYSST+MSIFY G LLGSA V AGSQ  RSCQ+LRLPARLDGL+LAH+
Sbjct: 61  TVHVTNPNISPIHYSSTTMSIFYQGELLGSADVQAGSQPPRSCQLLRLPARLDGLRLAHH 120

Query: 121 GSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLIVDPVFLDVLDQENTSQL 180
            +RF SDV KREM+LDA+VDIGG ARVLWW HKFKVHVDSH+ VDP+FLDV+ QEN S+L
Sbjct: 121 AARFFSDVAKREMLLDAAVDIGGTARVLWWDHKFKVHVDSHVTVDPLFLDVIGQENKSEL 180

Query: 181 ELFLS 186
            L L+
Sbjct: 181 TLNLA 183

[Close]
BLAST of Cp4.1LG05g04110 vs. TrEMBL
Match: V7AK04_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G095000g PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 2.7e-72
Identity = 137/183 (74.86%), Postives = 161/183 (87.98%), Query Frame = 1 

Query: 1   MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVVDAELIL 60
           M KK  WSWS  SA++GAASA+AATA++SAKPKDPTFHLISI FTS KL  P++DAE++L
Sbjct: 1   MGKKVKWSWS--SAIIGAASAVAATALISAKPKDPTFHLISINFTSLKLNLPLLDAEVLL 60

Query: 61  TVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHN 120
           TVHVTNPN+APIHYSSTSMSIFY+GSLLGSAQV AGSQ  RSCQ+LRLPARL  L+LA++
Sbjct: 61  TVHVTNPNIAPIHYSSTSMSIFYEGSLLGSAQVQAGSQPPRSCQLLRLPARLHALQLANH 120

Query: 121 GSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLIVDPVFLDVLDQENTSQL 180
            +RF+ DV +REMVLDA+VDI G ARV+WW H FKVHVDSH+ VDPVFLDV+DQENTS+L
Sbjct: 121 ATRFLHDVARREMVLDAAVDIAGAARVMWWDHNFKVHVDSHVTVDPVFLDVIDQENTSEL 180

Query: 181 ELF 184
           E+F
Sbjct: 181 EVF 181

[Close]
BLAST of Cp4.1LG05g04110 vs. TAIR10
Match: AT3G44380.1 (AT3G44380.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 250.4 bits (638), Expect = 8.8e-67
Identity = 122/177 (68.93%), Postives = 147/177 (83.05%), Query Frame = 1 

Query: 9   WSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVVDAELILTVHVTNPN 68
           WSW SAL+GAASA AA +++SAKPKDPTFHLISI  TS KL  PV+DAEL+LTVHVTNPN
Sbjct: 10  WSWSSALIGAASATAAASLLSAKPKDPTFHLISIDLTSLKLNLPVLDAELMLTVHVTNPN 69

Query: 69  VAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHNGSRFISDV 128
           +A IHYSST M+I YDG++LGSA+V AGSQ ARSCQ+LRLPARLDG++LA +  +F SDV
Sbjct: 70  IAAIHYSSTKMTILYDGTVLGSAEVKAGSQPARSCQLLRLPARLDGMELAQHARQFFSDV 129

Query: 129 MKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLIVDPVFLDVLDQENTSQLELFLS 186
             REM L+A + I G A+VLWW H F+VHVDS + VDPVFLDV+ QEN SQ++LFL+
Sbjct: 130 ANREMKLEAKLTIEGAAKVLWWDHSFRVHVDSFVTVDPVFLDVIGQENKSQMDLFLT 186

[Close]
BLAST of Cp4.1LG05g04110 vs. NCBI nr
Match: gi|659097347|ref|XP_008449575.1| (PREDICTED: uncharacterized protein LOC103491417 [Cucumis melo])

HSP 1 Score: 334.0 bits (855), Expect = 1.7e-88
Identity = 170/185 (91.89%), Postives = 178/185 (96.22%), Query Frame = 1 

Query: 1   MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVVDAELIL 60
           M KKR+WSWS  SALVGAASA+AATAI+SAKPKDPTFHLISIKFTSFKLKPPVVDAELIL
Sbjct: 100 MGKKRNWSWS--SALVGAASAVAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDAELIL 159

Query: 61  TVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHN 120
           TVHVTNPNVAPIHYSST+MSIFY+GSLLGSAQVDAGSQQ RSCQVLRLPARLDGLKLAH+
Sbjct: 160 TVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHH 219

Query: 121 GSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLIVDPVFLDVLDQENTSQL 180
           GSRFISDV KREMVLDASVDIGG A+VLWWSHKFKVHVDSHL VDPVFLDVLDQENTSQL
Sbjct: 220 GSRFISDVAKREMVLDASVDIGGFAKVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL 279

Query: 181 ELFLS 186
           ELFL+
Sbjct: 280 ELFLN 282

[Close]
BLAST of Cp4.1LG05g04110 vs. NCBI nr
Match: gi|449444795|ref|XP_004140159.1| (PREDICTED: uncharacterized protein LOC101218134 [Cucumis sativus])

HSP 1 Score: 332.8 bits (852), Expect = 3.8e-88
Identity = 170/185 (91.89%), Postives = 177/185 (95.68%), Query Frame = 1 

Query: 1   MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVVDAELIL 60
           M KKR+WSW+  SALVGAASAIAATAI+SAKPKDPTFHLISIKFTSFKLKPPVVD ELIL
Sbjct: 1   MGKKRNWSWT--SALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELIL 60

Query: 61  TVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHN 120
           TVHVTNPNVAPIHYSST+MSIFY+GSLLGSAQVDAGSQQ RSCQVLRLPARLDGLKLAH+
Sbjct: 61  TVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHH 120

Query: 121 GSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLIVDPVFLDVLDQENTSQL 180
           GSRFISDV KREMVLDASVDIGG ARVLWWSHKFKVHVDSHL VDPVFLDVLDQENTSQL
Sbjct: 121 GSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL 180

Query: 181 ELFLS 186
           ELFL+
Sbjct: 181 ELFLN 183

[Close]
BLAST of Cp4.1LG05g04110 vs. NCBI nr
Match: gi|700192825|gb|KGN48029.1| (hypothetical protein Csa_6G425170 [Cucumis sativus])

HSP 1 Score: 332.8 bits (852), Expect = 3.8e-88
Identity = 170/185 (91.89%), Postives = 177/185 (95.68%), Query Frame = 1 

Query: 1   MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVVDAELIL 60
           M KKR+WSW+  SALVGAASAIAATAI+SAKPKDPTFHLISIKFTSFKLKPPVVD ELIL
Sbjct: 40  MGKKRNWSWT--SALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELIL 99

Query: 61  TVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHN 120
           TVHVTNPNVAPIHYSST+MSIFY+GSLLGSAQVDAGSQQ RSCQVLRLPARLDGLKLAH+
Sbjct: 100 TVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHH 159

Query: 121 GSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLIVDPVFLDVLDQENTSQL 180
           GSRFISDV KREMVLDASVDIGG ARVLWWSHKFKVHVDSHL VDPVFLDVLDQENTSQL
Sbjct: 160 GSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL 219

Query: 181 ELFLS 186
           ELFL+
Sbjct: 220 ELFLN 222

[Close]
BLAST of Cp4.1LG05g04110 vs. NCBI nr
Match: gi|950941629|ref|XP_014493446.1| (PREDICTED: uncharacterized protein LOC106755749 [Vigna radiata var. radiata])

HSP 1 Score: 282.0 bits (720), Expect = 7.8e-73
Identity = 139/183 (75.96%), Postives = 160/183 (87.43%), Query Frame = 1 

Query: 1   MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVVDAELIL 60
           M KK  WSWS  SA++GAASA+AATA++SAKPKDPTFHLISI  TS KL  P++DAE++L
Sbjct: 1   MGKKVKWSWS--SAIIGAASAVAATALISAKPKDPTFHLISINMTSLKLNLPLLDAEVLL 60

Query: 61  TVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHN 120
           TVHVTNPN+API YSSTSMSIFY+GSLLGSAQV AGSQ  RSCQ+LRLPARL GL+LAH+
Sbjct: 61  TVHVTNPNIAPIDYSSTSMSIFYEGSLLGSAQVQAGSQPPRSCQLLRLPARLHGLQLAHH 120

Query: 121 GSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLIVDPVFLDVLDQENTSQL 180
             RF+ DV +REMVLDASVDI GIARV+WW H FKVHVDSH+ VDPVFLDV+DQENTS+L
Sbjct: 121 AKRFLQDVARREMVLDASVDIAGIARVMWWDHNFKVHVDSHVTVDPVFLDVIDQENTSEL 180

Query: 181 ELF 184
           E+F
Sbjct: 181 EVF 181

[Close]
BLAST of Cp4.1LG05g04110 vs. NCBI nr
Match: gi|920708541|gb|KOM50538.1| (hypothetical protein LR48_Vigan08g136500 [Vigna angularis])

HSP 1 Score: 282.0 bits (720), Expect = 7.8e-73
Identity = 139/183 (75.96%), Postives = 160/183 (87.43%), Query Frame = 1 

Query: 1   MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVVDAELIL 60
           M KK  WSWS  SA++GAASA+AATA++SAKPKDPTFHLISI  TS KL  P++DAE++L
Sbjct: 1   MGKKVKWSWS--SAIIGAASAVAATALISAKPKDPTFHLISISMTSLKLNLPLLDAEVLL 60

Query: 61  TVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHN 120
           TVHVTNPN+API YSSTSMSIFY+GSLLGSAQV AGSQ  RSCQ+LRLPARL GL+LAH+
Sbjct: 61  TVHVTNPNIAPIDYSSTSMSIFYEGSLLGSAQVQAGSQPPRSCQLLRLPARLHGLQLAHH 120

Query: 121 GSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLIVDPVFLDVLDQENTSQL 180
             RF+ DV +REMVLDASVDI GIARV+WW H FKVHVDSH+ VDPVFLDV+DQENTS+L
Sbjct: 121 AKRFLQDVARREMVLDASVDIAGIARVMWWDHNFKVHVDSHVTVDPVFLDVIDQENTSEL 180

Query: 181 ELF 184
           E+F
Sbjct: 181 EVF 181

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g04110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG05g04110 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGW5_CUCSA2.7e-8891.89Uncharacterized protein OS=Cucumis sativus GN=Csa_6G425170 PE=4 SV=1[more]
A0A0S3SBZ9_PHAAN5.4e-7375.96Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G164300 PE=... [more]
A0A0L9V6C7_PHAAN5.4e-7375.96Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g136500 PE=4 SV=1[more]
W9QJ47_9ROSA1.2e-7275.68Uncharacterized protein OS=Morus notabilis GN=L484_022324 PE=4 SV=1[more]
V7AK04_PHAVU2.7e-7274.86Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G095000g PE=4 SV=1[more]
BLAST of Cp4.1LG05g04110 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G44380.18.8e-6768.93 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
BLAST of Cp4.1LG05g04110 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659097347|ref|XP_008449575.1|1.7e-8891.89PREDICTED: uncharacterized protein LOC103491417 [Cucumis melo][more]
gi|449444795|ref|XP_004140159.1|3.8e-8891.89PREDICTED: uncharacterized protein LOC101218134 [Cucumis sativus][more]
gi|700192825|gb|KGN48029.1|3.8e-8891.89hypothetical protein Csa_6G425170 [Cucumis sativus][more]
gi|950941629|ref|XP_014493446.1|7.8e-7375.96PREDICTED: uncharacterized protein LOC106755749 [Vigna radiata var. radiata][more]
gi|920708541|gb|KOM50538.1|7.8e-7375.96hypothetical protein LR48_Vigan08g136500 [Vigna angularis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009269response to desiccation
Vocabulary: INTERPRO
TermDefinition
IPR013990WHy-dom
IPR013783Ig-like_fold
IPR004864LEA_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009269 response to desiccation
biological_process GO:0007032 endosome organization
biological_process GO:0008152 metabolic process
biological_process GO:0010091 trichome branching
biological_process GO:0007033 vacuole organization
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0005575 cellular_component
cellular_component GO:0005771 multivesicular body
cellular_component GO:0005634 nucleus
cellular_component GO:0009506 plasmodesma
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0005524 ATP binding
molecular_function GO:0008568 microtubule-severing ATPase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g04110.1Cp4.1LG05g04110.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA-14PFAMPF03168LEA_2coord: 61..158
score: 7.2
IPR013783Immunoglobulin-like foldGENE3DG3DSA:2.60.40.10coord: 56..118
score: 8.
IPR013990Water stress and hypersensitive response domainSMARTSM00769whycoord: 42..155
score: 2.0
NoneNo IPR availablePANTHERPTHR31852FAMILY NOT NAMEDcoord: 1..184
score: 2.8E
NoneNo IPR availablePANTHERPTHR31852:SF7LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEINcoord: 1..184
score: 2.8E
NoneNo IPR availableunknownSSF117070LEA14-likecoord: 24..142
score: 2.09

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG05g04110Cucsa.185690Cucumber (Gy14) v1cgycpeB0516
Cp4.1LG05g04110CmaCh20G001630Cucurbita maxima (Rimu)cmacpeB580
Cp4.1LG05g04110CmaCh02G013230Cucurbita maxima (Rimu)cmacpeB644
Cp4.1LG05g04110CmoCh02G013630Cucurbita moschata (Rifu)cmocpeB594
Cp4.1LG05g04110CmoCh20G001790Cucurbita moschata (Rifu)cmocpeB529
Cp4.1LG05g04110Cla008639Watermelon (97103) v1cpewmB745
Cp4.1LG05g04110Csa6G425170Cucumber (Chinese Long) v2cpecuB758
Cp4.1LG05g04110MELO3C014499Melon (DHL92) v3.5.1cpemeB693
Cp4.1LG05g04110ClCG02G022220Watermelon (Charleston Gray)cpewcgB659
Cp4.1LG05g04110CSPI06G23220Wild cucumber (PI 183967)cpecpiB761
Cp4.1LG05g04110Lsi10G011560Bottle gourd (USVL1VR-Ls)cpelsiB591
Cp4.1LG05g04110MELO3C014499.2Melon (DHL92) v3.6.1cpemedB827
Cp4.1LG05g04110CsaV3_6G038350Cucumber (Chinese Long) v3cpecucB0939
Cp4.1LG05g04110Bhi10G000014Wax gourdcpewgoB0946
Cp4.1LG05g04110CsGy6G022460Cucumber (Gy14) v2cgybcpeB861
Cp4.1LG05g04110Carg02638Silver-seed gourdcarcpeB1284
Cp4.1LG05g04110Carg18425Silver-seed gourdcarcpeB0582
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG05g04110Cp4.1LG16g08120Cucurbita pepo (Zucchini)cpecpeB319
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g04110Silver-seed gourdcarcpeB1282
Cp4.1LG05g04110Cucumber (Chinese Long) v3cpecucB0942
Cp4.1LG05g04110Cucurbita pepo (Zucchini)cpecpeB420
Cp4.1LG05g04110Cucumber (Gy14) v1cgycpeB0148
Cp4.1LG05g04110Cucurbita maxima (Rimu)cmacpeB886
Cp4.1LG05g04110Cucurbita moschata (Rifu)cmocpeB824
Cp4.1LG05g04110Wild cucumber (PI 183967)cpecpiB762
Cp4.1LG05g04110Cucumber (Chinese Long) v2cpecuB759
Cp4.1LG05g04110Watermelon (Charleston Gray)cpewcgB675
Cp4.1LG05g04110Watermelon (97103) v1cpewmB722
Cp4.1LG05g04110Melon (DHL92) v3.5.1cpemeB705
Cp4.1LG05g04110Cucumber (Gy14) v2cgybcpeB865