CmaCh02G013230 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh02G013230
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	Cma_Chr02 : 7758181 .. 7758738 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAAAAGCGTAGCTGGAGCTGGAGCTGGGGGTCCGCCCTAGTCGGAGCAGCGTCGGCGATTGCAGCGACAGCGATCGTTTCCGCCAAGCCCAAGGACCCAACCTTCCACCTTATCTCAATTAAGTTCACTTCCTTCAAGCTGAAGCCGCCGGTAATTGACGCCGAGCTCATCCTGACCGTCCACGTCACCAACCCCAACGTGGCCCCCATCCACTACTCCTCTACCTCCATGTCCATTTTCTACGACGGCTCCCTCCTCGGCTCGGCCCAGGTCGACGCCGGTTCGCAGCAGGCCCGGTCCTGTCAGGTCCTCCGCCTCCCAGCCCGACTCGACGGCCTGAAGCTAGCCCACAACGGCAGCCGGTTCATCTCCGACGTCATGAAGCGAGAAATGGTTCTGGATGCGAGTGTGGATATTGGGGGAATTGCAAGAGTGCTTTGGTGGAGTCACAAGTTCAAGGTCCACGTGGACAGCCATCTCACCGTTGATCCCGTCTTCCTTGATGTGCTTGATCAGGAAAACACTTCCCAACTTGAGCTGTTTCTTTCTTGA

mRNA sequence

ATGGAGAAAAAGCGTAGCTGGAGCTGGAGCTGGGGGTCCGCCCTAGTCGGAGCAGCGTCGGCGATTGCAGCGACAGCGATCGTTTCCGCCAAGCCCAAGGACCCAACCTTCCACCTTATCTCAATTAAGTTCACTTCCTTCAAGCTGAAGCCGCCGGTAATTGACGCCGAGCTCATCCTGACCGTCCACGTCACCAACCCCAACGTGGCCCCCATCCACTACTCCTCTACCTCCATGTCCATTTTCTACGACGGCTCCCTCCTCGGCTCGGCCCAGGTCGACGCCGGTTCGCAGCAGGCCCGGTCCTGTCAGGTCCTCCGCCTCCCAGCCCGACTCGACGGCCTGAAGCTAGCCCACAACGGCAGCCGGTTCATCTCCGACGTCATGAAGCGAGAAATGGTTCTGGATGCGAGTGTGGATATTGGGGGAATTGCAAGAGTGCTTTGGTGGAGTCACAAGTTCAAGGTCCACGTGGACAGCCATCTCACCGTTGATCCCGTCTTCCTTGATGTGCTTGATCAGGAAAACACTTCCCAACTTGAGCTGTTTCTTTCTTGA

Coding sequence (CDS)

ATGGAGAAAAAGCGTAGCTGGAGCTGGAGCTGGGGGTCCGCCCTAGTCGGAGCAGCGTCGGCGATTGCAGCGACAGCGATCGTTTCCGCCAAGCCCAAGGACCCAACCTTCCACCTTATCTCAATTAAGTTCACTTCCTTCAAGCTGAAGCCGCCGGTAATTGACGCCGAGCTCATCCTGACCGTCCACGTCACCAACCCCAACGTGGCCCCCATCCACTACTCCTCTACCTCCATGTCCATTTTCTACGACGGCTCCCTCCTCGGCTCGGCCCAGGTCGACGCCGGTTCGCAGCAGGCCCGGTCCTGTCAGGTCCTCCGCCTCCCAGCCCGACTCGACGGCCTGAAGCTAGCCCACAACGGCAGCCGGTTCATCTCCGACGTCATGAAGCGAGAAATGGTTCTGGATGCGAGTGTGGATATTGGGGGAATTGCAAGAGTGCTTTGGTGGAGTCACAAGTTCAAGGTCCACGTGGACAGCCATCTCACCGTTGATCCCGTCTTCCTTGATGTGCTTGATCAGGAAAACACTTCCCAACTTGAGCTGTTTCTTTCTTGA

Protein sequence

MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVIDAELILTVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHNGSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLS

Homology

[Close]

BLAST of CmaCh02G013230 vs. TrEMBL
Match: A0A0A0KGW5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G425170 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 5.4e-89
Identity = 170/185 (91.89%), Postives = 178/185 (96.22%), Query Frame = 1


Query: 1   MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVIDAELIL 60
           M KKR+WSW+  SALVGAASAIAATAI+SAKPKDPTFHLISIKFTSFKLKPPV+D ELIL
Sbjct: 40  MGKKRNWSWT--SALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELIL 99

Query: 61  TVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHN 120
           TVHVTNPNVAPIHYSST+MSIFY+GSLLGSAQVDAGSQQ RSCQVLRLPARLDGLKLAH+
Sbjct: 100 TVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHH 159

Query: 121 GSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL 180
           GSRFISDV KREMVLDASVDIGG ARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL
Sbjct: 160 GSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL 219

Query: 181 ELFLS 186
           ELFL+
Sbjct: 220 ELFLN 222

[Close]

BLAST of CmaCh02G013230 vs. TrEMBL
Match: A0A0S3SBZ9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G164300 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 6.4e-74
Identity = 140/183 (76.50%), Postives = 161/183 (87.98%), Query Frame = 1


Query: 1   MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVIDAELIL 60
           M KK  WSWS  SA++GAASA+AATA++SAKPKDPTFHLISI  TS KL  P++DAE++L
Sbjct: 1   MGKKVKWSWS--SAIIGAASAVAATALISAKPKDPTFHLISISMTSLKLNLPLLDAEVLL 60

Query: 61  TVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHN 120
           TVHVTNPN+API YSSTSMSIFY+GSLLGSAQV AGSQ  RSCQ+LRLPARL GL+LAH+
Sbjct: 61  TVHVTNPNIAPIDYSSTSMSIFYEGSLLGSAQVQAGSQPPRSCQLLRLPARLHGLQLAHH 120

Query: 121 GSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL 180
             RF+ DV +REMVLDASVDI GIARV+WW H FKVHVDSH+TVDPVFLDV+DQENTS+L
Sbjct: 121 AKRFLQDVARREMVLDASVDIAGIARVMWWDHNFKVHVDSHVTVDPVFLDVIDQENTSEL 180

Query: 181 ELF 184
           E+F
Sbjct: 181 EVF 181

[Close]

BLAST of CmaCh02G013230 vs. TrEMBL
Match: A0A0L9V6C7_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g136500 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 6.4e-74
Identity = 140/183 (76.50%), Postives = 161/183 (87.98%), Query Frame = 1


Query: 1   MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVIDAELIL 60
           M KK  WSWS  SA++GAASA+AATA++SAKPKDPTFHLISI  TS KL  P++DAE++L
Sbjct: 1   MGKKVKWSWS--SAIIGAASAVAATALISAKPKDPTFHLISISMTSLKLNLPLLDAEVLL 60

Query: 61  TVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHN 120
           TVHVTNPN+API YSSTSMSIFY+GSLLGSAQV AGSQ  RSCQ+LRLPARL GL+LAH+
Sbjct: 61  TVHVTNPNIAPIDYSSTSMSIFYEGSLLGSAQVQAGSQPPRSCQLLRLPARLHGLQLAHH 120

Query: 121 GSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL 180
             RF+ DV +REMVLDASVDI GIARV+WW H FKVHVDSH+TVDPVFLDV+DQENTS+L
Sbjct: 121 AKRFLQDVARREMVLDASVDIAGIARVMWWDHNFKVHVDSHVTVDPVFLDVIDQENTSEL 180

Query: 181 ELF 184
           E+F
Sbjct: 181 EVF 181

[Close]

BLAST of CmaCh02G013230 vs. TrEMBL
Match: W9QJ47_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022324 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.4e-73
Identity = 141/185 (76.22%), Postives = 160/185 (86.49%), Query Frame = 1


Query: 1   MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVIDAELIL 60
           M KK  WSWS  SAL+GAASA+AATA++ AKPKDPTFHLISI  TSFKL  PV+DAELIL
Sbjct: 1   MGKKVKWSWS--SALIGAASAVAATALIGAKPKDPTFHLISINLTSFKLNLPVLDAELIL 60

Query: 61  TVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHN 120
           TVHVTNPN++PIHYSST+MSIFY G LLGSA V AGSQ  RSCQ+LRLPARLDGL+LAH+
Sbjct: 61  TVHVTNPNISPIHYSSTTMSIFYQGELLGSADVQAGSQPPRSCQLLRLPARLDGLRLAHH 120

Query: 121 GSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL 180
            +RF SDV KREM+LDA+VDIGG ARVLWW HKFKVHVDSH+TVDP+FLDV+ QEN S+L
Sbjct: 121 AARFFSDVAKREMLLDAAVDIGGTARVLWWDHKFKVHVDSHVTVDPLFLDVIGQENKSEL 180

Query: 181 ELFLS 186
            L L+
Sbjct: 181 TLNLA 183

[Close]

BLAST of CmaCh02G013230 vs. TrEMBL
Match: V7AK04_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G095000g PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 3.2e-73
Identity = 138/183 (75.41%), Postives = 162/183 (88.52%), Query Frame = 1


Query: 1   MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVIDAELIL 60
           M KK  WSWS  SA++GAASA+AATA++SAKPKDPTFHLISI FTS KL  P++DAE++L
Sbjct: 1   MGKKVKWSWS--SAIIGAASAVAATALISAKPKDPTFHLISINFTSLKLNLPLLDAEVLL 60

Query: 61  TVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHN 120
           TVHVTNPN+APIHYSSTSMSIFY+GSLLGSAQV AGSQ  RSCQ+LRLPARL  L+LA++
Sbjct: 61  TVHVTNPNIAPIHYSSTSMSIFYEGSLLGSAQVQAGSQPPRSCQLLRLPARLHALQLANH 120

Query: 121 GSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL 180
            +RF+ DV +REMVLDA+VDI G ARV+WW H FKVHVDSH+TVDPVFLDV+DQENTS+L
Sbjct: 121 ATRFLHDVARREMVLDAAVDIAGAARVMWWDHNFKVHVDSHVTVDPVFLDVIDQENTSEL 180

Query: 181 ELF 184
           E+F
Sbjct: 181 EVF 181

[Close]

BLAST of CmaCh02G013230 vs. TAIR10
Match: AT3G44380.1 (AT3G44380.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 253.4 bits (646), Expect = 1.0e-67
Identity = 123/177 (69.49%), Postives = 148/177 (83.62%), Query Frame = 1


Query: 9   WSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVIDAELILTVHVTNPN 68
           WSW SAL+GAASA AA +++SAKPKDPTFHLISI  TS KL  PV+DAEL+LTVHVTNPN
Sbjct: 10  WSWSSALIGAASATAAASLLSAKPKDPTFHLISIDLTSLKLNLPVLDAELMLTVHVTNPN 69

Query: 69  VAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHNGSRFISDV 128
           +A IHYSST M+I YDG++LGSA+V AGSQ ARSCQ+LRLPARLDG++LA +  +F SDV
Sbjct: 70  IAAIHYSSTKMTILYDGTVLGSAEVKAGSQPARSCQLLRLPARLDGMELAQHARQFFSDV 129

Query: 129 MKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQLELFLS 186
             REM L+A + I G A+VLWW H F+VHVDS +TVDPVFLDV+ QEN SQ++LFL+
Sbjct: 130 ANREMKLEAKLTIEGAAKVLWWDHSFRVHVDSFVTVDPVFLDVIGQENKSQMDLFLT 186

[Close]

BLAST of CmaCh02G013230 vs. NCBI nr
Match: gi|659097347|ref|XP_008449575.1| (PREDICTED: uncharacterized protein LOC103491417 [Cucumis melo])

HSP 1 Score: 336.3 bits (861), Expect = 3.5e-89
Identity = 170/185 (91.89%), Postives = 179/185 (96.76%), Query Frame = 1


Query: 1   MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVIDAELIL 60
           M KKR+WSWS  SALVGAASA+AATAI+SAKPKDPTFHLISIKFTSFKLKPPV+DAELIL
Sbjct: 100 MGKKRNWSWS--SALVGAASAVAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDAELIL 159

Query: 61  TVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHN 120
           TVHVTNPNVAPIHYSST+MSIFY+GSLLGSAQVDAGSQQ RSCQVLRLPARLDGLKLAH+
Sbjct: 160 TVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHH 219

Query: 121 GSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL 180
           GSRFISDV KREMVLDASVDIGG A+VLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL
Sbjct: 220 GSRFISDVAKREMVLDASVDIGGFAKVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL 279

Query: 181 ELFLS 186
           ELFL+
Sbjct: 280 ELFLN 282

[Close]

BLAST of CmaCh02G013230 vs. NCBI nr
Match: gi|449444795|ref|XP_004140159.1| (PREDICTED: uncharacterized protein LOC101218134 [Cucumis sativus])

HSP 1 Score: 335.1 bits (858), Expect = 7.7e-89
Identity = 170/185 (91.89%), Postives = 178/185 (96.22%), Query Frame = 1


Query: 1   MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVIDAELIL 60
           M KKR+WSW+  SALVGAASAIAATAI+SAKPKDPTFHLISIKFTSFKLKPPV+D ELIL
Sbjct: 1   MGKKRNWSWT--SALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELIL 60

Query: 61  TVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHN 120
           TVHVTNPNVAPIHYSST+MSIFY+GSLLGSAQVDAGSQQ RSCQVLRLPARLDGLKLAH+
Sbjct: 61  TVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHH 120

Query: 121 GSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL 180
           GSRFISDV KREMVLDASVDIGG ARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL
Sbjct: 121 GSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL 180

Query: 181 ELFLS 186
           ELFL+
Sbjct: 181 ELFLN 183

[Close]

BLAST of CmaCh02G013230 vs. NCBI nr
Match: gi|700192825|gb|KGN48029.1| (hypothetical protein Csa_6G425170 [Cucumis sativus])

HSP 1 Score: 335.1 bits (858), Expect = 7.7e-89
Identity = 170/185 (91.89%), Postives = 178/185 (96.22%), Query Frame = 1


Query: 1   MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVIDAELIL 60
           M KKR+WSW+  SALVGAASAIAATAI+SAKPKDPTFHLISIKFTSFKLKPPV+D ELIL
Sbjct: 40  MGKKRNWSWT--SALVGAASAIAATAIISAKPKDPTFHLISIKFTSFKLKPPVVDTELIL 99

Query: 61  TVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHN 120
           TVHVTNPNVAPIHYSST+MSIFY+GSLLGSAQVDAGSQQ RSCQVLRLPARLDGLKLAH+
Sbjct: 100 TVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQQPRSCQVLRLPARLDGLKLAHH 159

Query: 121 GSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL 180
           GSRFISDV KREMVLDASVDIGG ARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL
Sbjct: 160 GSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL 219

Query: 181 ELFLS 186
           ELFL+
Sbjct: 220 ELFLN 222

[Close]

BLAST of CmaCh02G013230 vs. NCBI nr
Match: gi|950941629|ref|XP_014493446.1| (PREDICTED: uncharacterized protein LOC106755749 [Vigna radiata var. radiata])

HSP 1 Score: 285.0 bits (728), Expect = 9.2e-74
Identity = 140/183 (76.50%), Postives = 161/183 (87.98%), Query Frame = 1


Query: 1   MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVIDAELIL 60
           M KK  WSWS  SA++GAASA+AATA++SAKPKDPTFHLISI  TS KL  P++DAE++L
Sbjct: 1   MGKKVKWSWS--SAIIGAASAVAATALISAKPKDPTFHLISINMTSLKLNLPLLDAEVLL 60

Query: 61  TVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHN 120
           TVHVTNPN+API YSSTSMSIFY+GSLLGSAQV AGSQ  RSCQ+LRLPARL GL+LAH+
Sbjct: 61  TVHVTNPNIAPIDYSSTSMSIFYEGSLLGSAQVQAGSQPPRSCQLLRLPARLHGLQLAHH 120

Query: 121 GSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL 180
             RF+ DV +REMVLDASVDI GIARV+WW H FKVHVDSH+TVDPVFLDV+DQENTS+L
Sbjct: 121 AKRFLQDVARREMVLDASVDIAGIARVMWWDHNFKVHVDSHVTVDPVFLDVIDQENTSEL 180

Query: 181 ELF 184
           E+F
Sbjct: 181 EVF 181

[Close]

BLAST of CmaCh02G013230 vs. NCBI nr
Match: gi|920708541|gb|KOM50538.1| (hypothetical protein LR48_Vigan08g136500 [Vigna angularis])

HSP 1 Score: 285.0 bits (728), Expect = 9.2e-74
Identity = 140/183 (76.50%), Postives = 161/183 (87.98%), Query Frame = 1


Query: 1   MEKKRSWSWSWGSALVGAASAIAATAIVSAKPKDPTFHLISIKFTSFKLKPPVIDAELIL 60
           M KK  WSWS  SA++GAASA+AATA++SAKPKDPTFHLISI  TS KL  P++DAE++L
Sbjct: 1   MGKKVKWSWS--SAIIGAASAVAATALISAKPKDPTFHLISISMTSLKLNLPLLDAEVLL 60

Query: 61  TVHVTNPNVAPIHYSSTSMSIFYDGSLLGSAQVDAGSQQARSCQVLRLPARLDGLKLAHN 120
           TVHVTNPN+API YSSTSMSIFY+GSLLGSAQV AGSQ  RSCQ+LRLPARL GL+LAH+
Sbjct: 61  TVHVTNPNIAPIDYSSTSMSIFYEGSLLGSAQVQAGSQPPRSCQLLRLPARLHGLQLAHH 120

Query: 121 GSRFISDVMKREMVLDASVDIGGIARVLWWSHKFKVHVDSHLTVDPVFLDVLDQENTSQL 180
             RF+ DV +REMVLDASVDI GIARV+WW H FKVHVDSH+TVDPVFLDV+DQENTS+L
Sbjct: 121 AKRFLQDVARREMVLDASVDIAGIARVMWWDHNFKVHVDSHVTVDPVFLDVIDQENTSEL 180

Query: 181 ELF 184
           E+F
Sbjct: 181 EVF 181

The following BLAST results are available for this feature:

BLAST of CmaCh02G013230 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh02G013230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGW5_CUCSA	5.4e-89	91.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G425170 PE=4 SV=1	[more]
A0A0S3SBZ9_PHAAN	6.4e-74	76.50	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G164300 PE=...	[more]
A0A0L9V6C7_PHAAN	6.4e-74	76.50	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g136500 PE=4 SV=1	[more]
W9QJ47_9ROSA	1.4e-73	76.22	Uncharacterized protein OS=Morus notabilis GN=L484_022324 PE=4 SV=1	[more]
V7AK04_PHAVU	3.2e-73	75.41	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G095000g PE=4 SV=1	[more]

BLAST of CmaCh02G013230 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G44380.1	1.0e-67	69.49	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]

BLAST of CmaCh02G013230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659097347\|ref\|XP_008449575.1\|	3.5e-89	91.89	PREDICTED: uncharacterized protein LOC103491417 [Cucumis melo]	[more]
gi\|449444795\|ref\|XP_004140159.1\|	7.7e-89	91.89	PREDICTED: uncharacterized protein LOC101218134 [Cucumis sativus]	[more]
gi\|700192825\|gb\|KGN48029.1\|	7.7e-89	91.89	hypothetical protein Csa_6G425170 [Cucumis sativus]	[more]
gi\|950941629\|ref\|XP_014493446.1\|	9.2e-74	76.50	PREDICTED: uncharacterized protein LOC106755749 [Vigna radiata var. radiata]	[more]
gi\|920708541\|gb\|KOM50538.1\|	9.2e-74	76.50	hypothetical protein LR48_Vigan08g136500 [Vigna angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2
IPR013783	Ig-like_fold
IPR013990	WHy-dom

Vocabulary: **Biological Process**
Term	Definition
GO:0009269	response to desiccation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009269	response to desiccation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005524	ATP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G013230.1	CmaCh02G013230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA-14	PFAM	PF03168	LEA_2	coord: 61..160 score: 5.0
IPR013783	Immunoglobulin-like fold	GENE3D	G3DSA:2.60.40.10		coord: 56..118 score: 8.
IPR013990	Water stress and hypersensitive response domain	SMART	SM00769	why	coord: 42..155 score: 2.5
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 1..184 score: 3.3E
None	No IPR available	PANTHER	PTHR31852:SF7	LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN	coord: 1..184 score: 3.3E
None	No IPR available	unknown	SSF117070	LEA14-like	coord: 24..160 score: 1.24

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh02G013230	Cucsa.185690	Cucumber (Gy14) v1	cgycmaB0531
CmaCh02G013230	Cla008639	Watermelon (97103) v1	cmawmB592
CmaCh02G013230	Csa6G425170	Cucumber (Chinese Long) v2	cmacuB630
CmaCh02G013230	MELO3C014499	Melon (DHL92) v3.5.1	cmameB572
CmaCh02G013230	ClCG02G022220	Watermelon (Charleston Gray)	cmawcgB541
CmaCh02G013230	CSPI06G23220	Wild cucumber (PI 183967)	cmacpiB635
CmaCh02G013230	CmoCh02G013630	Cucurbita moschata (Rifu)	cmacmoB619
CmaCh02G013230	CmoCh20G001790	Cucurbita moschata (Rifu)	cmacmoB607
CmaCh02G013230	Lsi10G011560	Bottle gourd (USVL1VR-Ls)	cmalsiB540
CmaCh02G013230	Cp4.1LG16g08120	Cucurbita pepo (Zucchini)	cmacpeB627
CmaCh02G013230	Cp4.1LG05g04110	Cucurbita pepo (Zucchini)	cmacpeB644
CmaCh02G013230	MELO3C014499.2	Melon (DHL92) v3.6.1	cmamedB654
CmaCh02G013230	CsaV3_6G038350	Cucumber (Chinese Long) v3	cmacucB0752
CmaCh02G013230	Cla97C02G048310	Watermelon (97103) v2	cmawmbB629
CmaCh02G013230	Bhi10G000014	Wax gourd	cmawgoB0747
CmaCh02G013230	CsGy6G022460	Cucumber (Gy14) v2	cgybcmaB819
CmaCh02G013230	Carg02638	Silver-seed gourd	carcmaB1268
CmaCh02G013230	Carg18425	Silver-seed gourd	carcmaB0576

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh02G013230	CmaCh20G001630	Cucurbita maxima (Rimu)	cmacmaB470

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh02G013230	Cucurbita moschata (Rifu)	cmacmoB628
CmaCh02G013230	Wild cucumber (PI 183967)	cmacpiB648
CmaCh02G013230	Cucumber (Chinese Long) v2	cmacuB579
CmaCh02G013230	Cucumber (Chinese Long) v2	cmacuB641
CmaCh02G013230	Melon (DHL92) v3.5.1	cmameB585
CmaCh02G013230	Watermelon (Charleston Gray)	cmawcgB558
CmaCh02G013230	Watermelon (97103) v1	cmawmB582
CmaCh02G013230	Cucurbita pepo (Zucchini)	cmacpeB634
CmaCh02G013230	Bottle gourd (USVL1VR-Ls)	cmalsiB564
CmaCh02G013230	Cucumber (Gy14) v2	cgybcmaB123
CmaCh02G013230	Cucumber (Gy14) v2	cgybcmaB829
CmaCh02G013230	Silver-seed gourd	carcmaB0332
CmaCh02G013230	Cucumber (Chinese Long) v3	cmacucB0758
CmaCh02G013230	Cucumber (Chinese Long) v3	cmacucB0694
CmaCh02G013230	Watermelon (97103) v2	cmawmbB602
CmaCh02G013230	Watermelon (97103) v2	cmawmbB647
CmaCh02G013230	Cucurbita maxima (Rimu)	cmacmaB498
CmaCh02G013230	Cucurbita maxima (Rimu)	cmacmaB507
CmaCh02G013230	Cucumber (Gy14) v1	cgycmaB0152