Cp4.1LG05g03710 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG05g03710
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Methyl-CpG-binding domain-containing protein 13
Location	Cp4.1LG05 : 1747256 .. 1755286 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGTAGGCATAACGGGGACGGATTGATCTGGTTTGAAAATTGAGGAAATCAATGTTGTTCAGCTCTTTCATTTGGCTTCCATTTTAACCCAACGGGTTGAAGCAGAAGATGAAGATCTAATCCACTGATTCAATGGTCAAACCCCTCTTAACCAAAAAGGTCTCTGGAGAGAGAGAGAGAGAGTGCGAAAAGGAGCTTCTGGTTGCGTCTTGAAGAACCCCATGTTCGAGGCCTGAGCTTTTTTCCCTCTCCACTAGCAGACCCATCTCAGTGAATAATCTTTTCCTTTTTGTACAAAAAAAAGAAAAGAAAAAAAGAGAAGGATTTCCATTTGCACCCACGTGTACGCACCTCAATTTCTCCCCTTCCCCCTTCCCTTTCCCTTTTGCCTTCTTTCTTTGACCTAATTAATTCCGTTTTGGTGTTCAGCTTCGAGTTTCAGCTCCATTCTTACGCGGACTGTGGGAAACCGATCTCGATTGCTCACTGTCTGCTGATCTATTGTTCATTTTTCAGGGAAGATGGTGTCTAAGGGTTCGCCGGACTGGCTTCCCTCCGGCTGGACTGTGCAGTTTAAAGTCCAGAAGACGGGCAGGAAAATTAGGGTAATTTTTTATTTTTTATTTTTTTTATTTTAAAGAACTTCAGTGGCATTTTTGGGGGCTTTGATTATGGGTTTTGCTTTTTGGCTGGTGCTTGTGAGTTTTGGGGCGGATTGTGTTGTGTGACATGTTTCTCTTCTGGTTTGTTCATTGGAATTTTGGTATTGGGTCTGCAGGGTTTGTGTTTTTTTCCATATTGTTGGGTGTAGTGCTCTGAATGTTCAGCCCTTTTCTTTGGTGGGCATATTATATAGATATCTCGTGTTCTCAAGGGAAGAAAGGGCATTTGACTAGTACTAGAATGTCTTGTGGAAGACATAGTCTGTCTCTTTTTGTTTCTATGGTGGTTTTGCTTCTGGTTAGCTCTCTTATAACCTACCCTTGATGTAAAGTTGTTTCTTCATCTTCCTACTTCAACTGTGGTTCTTGCTAGTCAGAGTGGAGTTTCTTCCCCTCCACTGAACCACAACGATCTGCCGAATAAAAAGCGAAGCTTTTATTGTCTCTTTGCACATCCTATCCCAAGTGATGGAAAGGAATTAGAAGTCTCATATGTTGGAAGAAACCCATTTGTTTCCTTTACCTTGACTTCATCTCAAAGACTGAATCCTTGGTTTTCTGAAGGAGTTCCCCGTCACTTCTGTTAAGGGATGTTTTTTTACAAAACAAGACGTGCACCGGGTTTTATTATGGATAGAAGAATTATATAACTTGAGGACTGTCACCTGCAAATTTTTAAGATAAAAGATTATGGAGGCACAAGGCAGGGAAGATATTATTATTCTACTGGGAGATAATAGATCAGGGTGGAGGAAATTCGTGGAGCTTTTACGACAAAACTCAACGAATTTCAAAGAACCCTGGAACAGGCATCAAAGATATATAGTGGAAAAGAAACCTGTTACCAAAAAGAGAAGTGTAAACGGAACCTTTACTGATGAGAAGTGGAAGACAAGTCTGTGGTCGTTTGCATAGTTTTCACTTGGAGAAAAATGTGAACTTCTACCAAATGGATTGGAAAAGAACTATAGTGCTCAAAGGATGGTTACTTCGATGGAGGTTGGTTTAAAATTTGGCAAAACATATTGGAAACTTCGGTCTTCGATTCTTTGTTGAACTCCTGCCAACCAAATAATTCTCTGTAATCTAGTGTATGTTATATAAATATGGAGGAAGCTAGAATCTGATGCATGAAATATGAACAGGGGACGGTGCTAAGGCCATTCTATATGAGAGGAGGCCACAAAAAACTTATACCCCTAAACAATACCGGCAAGAACTTCTAGAACATACATCCCAACACTGAGATTGTTCCTTTCCCTATGAATGGTGGTGTTCAAAACCGCAGACTTTTAGCAATCTCCTGTCACCGGCCTGATAGTGTGCTAGAAGTGGCTGGACAGGTTTTTTTTGGCAAACCCCTTAAGCACCTAATTGAAAGTTGGGACTTCCTGGAGTTAGGATTAAAGCACCTATAGGTTGATTCATTTTGTTGGGCATGTGGAAACATTGTGAACTAAAATAGCTTTCTTCATAGTTGTTACTTGTTCCATCCCGACTTCCTGACGTAGTTTTACTGTGCTCGTTTCCCAAATTTGAGAAATTTAAGTTGAAACCAGAATCCCTGAAATTCTCTGAAAAAGTGTCTTATTTCTTCACTTCTCTTGTTCTGTAAGGCACCGGCTGTGTATGATAGATATATGCTTTAAGGCATTTGGAACGTTTTTTTTTTCTGGAAATAGAAGTTGTGAGCATCTAGGCCTACTTATGCACCTTGACTTATATCGTGACACAGCTGTTTGATATTGGTAAAATCTTAGTAAAGTTGATACCCTAACTAGGTTCCAACGCTATAAAGAAGGAAGAAAAAAACAAAAAACAAAAAACTAGGTAACCTCCATGTTTAGATCTGTGTTTACTGCTTGCCACTTTGATCATTGGGCCAATCCATGTGGTTCACCTGAAATGAATGATTTATTAGGGAAAAGCTCACATTACCGTATGACAACAATTTTATTCACGTTACCAAATCTTACTTACATTTTTACACTGTTTGGGATTTTATAGTTCTATACAAACTTGGAGAGTGGAAAAAGCTTTTATTCTAAGGATGATGTTATTGGATATATTAAAAGCGTTCAGTCTCAAAAGTCTTCACCAACTTCAAGTCGCATCAAAACGCAGTCAGGAAATAGTCCAGTGCAAGTGAGTTTGACTCCTGAACATATTTTTCCTTAAAAAAAATCCATTTTCATTTAAATTGTTTTATTTTTCCTCTGGTATAGCTCACAGTAAAAGCAAATGAACGCCCTGAATGGTTGCCTGCTGGCTGGAAAGTGGAGTCAAGAACACGAATGAGTGGTTCGAATGTTGGAGGAGTATACAAGGTAGCATATGTGTGCTAAGCTAAGTCAATTCATTATTGAGTGCTTACCCACTTCTTGCTTGTTGCAGTGTTACATTGATCCAGTGACAGGCAACAGATTTTATTCTAAGCCAGAGGTATTTCGATACCTCAGAACAGTGAAAAACAAAGTGTGCACATTGAAGGAGAGAAAGACAAGCAACGGCAAGAAGTCTAGAACCCATGTATGTTTCCTTACCAATCTCTTTTCGTGTTATTTTTTCCATTTCTTTTTCCTTTCCCCCGATTTTTTTGTCATCTTATAAAAAAAGTTGAAGATCGATTGAATGGGTAATGAAGGCTGATGATACTATAATATGCTGGACTTCTTAAAAATTTTAGTACAGCTGAGGGTGCATGAGAGATTTTACTAGCCTTCAGTGTGACAATTACATTCTTTAGAATCTTGGCATCAACTTAATGTTGGAATTTAACAAAAAACAACTGTGGACTCGTTTCTTCTTGTTCATCATGACACCACGAGAATACACATGGTTTACACTTAAAGGTCATATTCAAAGAGACTGGTGACAACCTGCCCAGGATGTAGGGTTTCGGTGTCCAGGATTTAAAACCTTGTTAGATTCTTGGACAACTAGATGGTTGAGGTGCATCTAAGCTGGATTGGATAATTACAGGGCTAAAAAGGGAGGTTTTTAGGTGATTCTGAAATGCTGCTTGCATACTGTGCTTCTTGGACTGCTTATGAATGCTTTGTACTATTTGCTTATTGAGTTGCGTAGCTGATATTCATATGTACTCTAGGTTGTTATTGAGCATTATAAAGATGAAGATTTGCCGCCTGGATGGATAAAGGAGATCAAGATCAGAGAAAAAGCAGATGGCATTAGGAAAGATCCCGTATGAGCTTCTTACTTCTGTCCCTCCGGGGCAAAAAAAAAAAAGAAAAAAAAAAGACATGCATATGTAAGAAAGAAACAGGCACACACACACACACACACACACACACACACAGATAAAAGAAGGTTATGCAATCATTGTCTTCTCACTGTTCCAAGCATGATTCATCTGCATTGTTAATTTCAATATAATTTCACTGCGTGGTTTCTCTCTTAGTTATATCCAACTCTCTTATGGGCTACCTGCTACAGTTTTACATAGATCCAAAATCTGGATATGTATTCCGCTCCAAGAAGGACGTTTTACGCTATCTTGAGACCGGAGAGATCAGTAGACATGCATTTAAACCAAAGGAAGGGGTTGATAATGATCAAGAATCGATTAATCACAAAATAATATCAGTAAGTCCTCTTGTTAGGTTCATGTGGGAATGCTGTAATGATATCACTTGCTGTAATCAGTTTGGTTTTAAATTTTGTCCTCCTCACTTTACTCTGTAATCAGTATGTTTTAGTCAACTGACCCTGAATGAAAGCCCCTACAATCCATTAATGGAAAGATTGATAGGAAAATGAACCCAAATTATGACGGGTTATTTTAGCGACAATGCTTCAGTCCGTTTCTAGCTATGCTTCAATGGTTTCTAATGAGGATAGTTTTAAAATTCTGAATTGTTGCTTGCTCTTATTTTAGAGCCCTTCTACTGCTAAAGGACAGAAACCAGAGCACCCTACAGCAACCCCACAACCTCTTGCAGGTACGAGCATTTGTAGATTGCTAACATTTTCTGGTGCTTATTGATTAGCCATACTGAAACGCTGTCCAAATACTTGTAGGAATAACTTTTATCTAGTTCTATACCACCTTTGATGATTTAATATGCAATAGATGTTGTAGGGAAGGAAATGCCAACAGAGAGCAGTTCAGAATTTCCAGGAGACCAAATTCTACTACCATCGGGGCGATATGGGAACCTGTCTTCTGAACTGAATGCTTCTGTTTCGCGTGTTGGAACTGTCACAAAGATTGTTTCGTCGCTGGTCAGGGAGCCTTCTGAAATCAAAGAGAAAAGTCGGAGAAGTTCAGCATCTCCTGAACCTGATCTTCCAGATGGTAAGGAAACTGAAAGAGCATCAGATGATGTACCAGTTTCAACTTCTGCTTCTGAGTTGGAGCAAGAGAAGGCATTGCCAAAAGCTGAAAAGCAAGAAAGTAATAAAGTTGATCCTGAAAACACTCCACTTTCAACCACTGCATCGAAGTTGCAACAAGAGAAGACTGCAATCTGTGATGTGATGGAAATGGGTGACAATGGGGAAAAGATAGAGACAGAACGAGATGACAATGGGGAAAATACAGAGACGGAAGGAGGCGACAATGGGGAACATACAGAAACTAAAAGAGTTGACAGTAGGAAAAAGACGAAGACAAGGAGGTTCAAGAAGAAGAAAGATATCAGCTTGCCTCGAAGGTCTTCGAAACGACTTGCTGGACGAAAACCAGAGTCGGCGCGTAAAGTAGAGGCAAAAGAAGTTCCTCAAGCTTCGAATAGAAACTGTCTTACTAAAGTTAGTCCAGATGCTGATAAAGCATGTCAGCAGCACAATGTAGGGCCAGAAAGGGTCAATGAAGATCATGGATCTAAATTCAAGGACATACCATTGCATGAAAATCCTTCTAATAAGAGGAAAACCCCTCCGGAATGCGGCCTAGATGTCCCACAAGAGAAAATACAGAGAATACGAACTGAAAAAAAGGATGATGTACAGATTGAAGCGCAGCTGAGTGTTCCAATTGCTGAATTTTGGTCAGACCCATGTCTGGAATTTGCAATCAAGACCCTTACAGGCGCATTGCCAGTGGAGAACGCAACCACCACCGATGGGCTAGTTTCTGATCCTACAATTGATTTCCTGCAAGGGCAGAAATCAGTCAAAAATGGTTCGGGAAGCTGCATGGATAAGAGAACTCAAGAGAACACAAAATTCAAGAACAAGAAAGAGTTCACATCAAATCGTCAATCTTCAAGTACTAATGGGCTCAAACCTGAATTGGCATCAAATATAATATCCTTTCAACAAGCAAACGATCGTTCAAATGAAGCTGTTCTAGCTTTCAATTTATCAGACAGTGGAATACTTGGAGAACCACAGAATGAACCGTGTAAAACATCTTGCCAAAAATTTCCACCCAGAGAGCTGCATCACCCTCCACCGGATAGGATCAATACATGTCACGAGAGCAACAAAATGGCGCTCGATGATCTGAATCAAAAGCATCAAACGAAAGACACAACCTCTGAAACTCCAATAGCCTTCCCATTTGGAGATTCCTGGGCAGACCCGTGCTTGGATTTTGCATTCAAGACTCTCACGGGTGCAATACCAATAGAAGGTAGTCTGGAAATTCAAAGCTACTTTGAGGAGCGAATCGAGTCCTCTCGAAGCCAAAGAGAGAGTAGCATAGCGCTTCCAGATTATGGATCCCCGAACTTCTTCCAAAACGATATATCGTCCCACTTTGATGGACCCGAAAAATCTGGTTCAGTACAGCACTTGAGTTTAGATCCTCTGCTGGGGAATGTGAATCTACCAAGCTGCAGTGGGTTCACTTCTCAACAGCAGCCTCGCGTAGATAGAAACAGACCTTTCAAGGGAAGGTGAAGTTTTTGAGGGAAGTGTAGCTTTTGGATGTAATAACAGCACAGGTCAGGTCTTGAGAAGAACGGCTCATTGCTCTTTTCTTCTTTTTAGCAAATCTGTATTATAATGGATGCTCCAATCTGGCATTTCAAATTCAGTAACTCCCACGTCAAACTCGAACCACTCTGTACCCTTTGCCAGAAATAGAAGAAAACAAATTCCTAATTTTTTTTATTGAAACAACTAACACTAGAATCGAATTGTTTGGATGTGATTAATTAGTAAAAAATCCAAAACAAAAACACATACATGAATGTTTGATGAGTTGTTATCTAATATTTGATGCATTGTTGATATTCCTTAAGAAATTTCTGATTAGCTCAAGAATATAACAAGAACGTTCATTACAACGAAACCAACTTTATTCTTAACCAACAATGACGACACGCCAAACTCGAGTTTAGCTTAATTTGTTAAAGTATATTATGTAGATTGAGAATTTAGAGGTTTAAATATTCACTCAGAAAAACTGATGACAAACAACATGTAGGAAATTCAGACACAACAAAGATCTTCTGATCTCTGAACACATTGGATTCGAAATCCCTCAAACATACAATTAGCAATCATGGAGTAGCGGTGGATCTCATTCTCCATCTGCGGATTGCTTCCATCCACCATAAGCTTCGTCTTCCCCTTGAAAATCTGTTGCAGTTCTCTCCTGCAGGCAGAGAATCGAAGTGTTAATAGCAAAATTAGCATAGCAAATGCTTATAGACAAGCCAAAAAGTCGAAATTTTATCTGATAATTCTACAACATAGTCGGAAGTAAAGAAGGAGAGCAACCTCAGGAGCGAAAGTAAGGCCAACTCGGATCTCTCCGCGGTATTCTGCATCCTTGACAACGTTATATGGTGTTGCAGGGAGGGTTTTTTCAAGGTAAACAGGTTCCAGAGGAATGCTGCAAATAATATACAGGGCATTTGAACAGGCTTGTGTTTTCATTATCAAACAGTCCTCATAGAACAAAATATACCCCATGATCTAAGCTAGTTTTTCGCTTTAGCGCATAGAAAGACCGTGCCAAGCAGATCAGAAAAATAACCATTCATACCAAGCTCAAAAATCCACTTCCTTTTCAATTAAAGCCTTGATTATGAGGAATAATTTGTTACCAGTGTAGAGGTTGGTTGTTCCTAAGAGAATTAAGAGTCATTTTTACTTACGTTACTTCGCCCACAAAGTCATCTTGCGTGCCACTATCACTGTCCAGTATCTTCAGGGTGATCTCTTCAGCGCCATCAGATATGGTGAATACAAAAGTCTCATTCCATTCAGGCTCGGACCCCTTTCCTGTATGCAATCAATAAACAATTCTGATGGTAGAAACACTTCCAAGTTTTTTAAAATAGGAGATGGTAGAGATTTGAGGATTATATTGAACATAAACCAACCCGACGAAACACTGCTTTTCTGCTCCTGTGAGCGGCAAGTAAGAACAACATAAGGATCCATGTCACC

mRNA sequence

TTGGTAGGCATAACGGGGACGGATTGATCTGGTTTGAAAATTGAGGAAATCAATGTTGTTCAGCTCTTTCATTTGGCTTCCATTTTAACCCAACGGGTTGAAGCAGAAGATGAAGATCTAATCCACTGATTCAATGGTCAAACCCCTCTTAACCAAAAAGGTCTCTGGAGAGAGAGAGAGAGAGTGCGAAAAGGAGCTTCTGGTTGCGTCTTGAAGAACCCCATGTTCGAGGCCTGAGCTTTTTTCCCTCTCCACTAGCAGACCCATCTCAGTGAATAATCTTTTCCTTTTTGTACAAAAAAAAGAAAAGAAAAAAAGAGAAGGATTTCCATTTGCACCCACGTGTACGCACCTCAATTTCTCCCCTTCCCCCTTCCCTTTCCCTTTTGCCTTCTTTCTTTGACCTAATTAATTCCGTTTTGGTGTTCAGCTTCGAGTTTCAGCTCCATTCTTACGCGGACTGTGGGAAACCGATCTCGATTGCTCACTGTCTGCTGATCTATTGTTCATTTTTCAGGGAAGATGGTGTCTAAGGGTTCGCCGGACTGGCTTCCCTCCGGCTGGACTGTGCAGTTTAAAGTCCAGAAGACGGGCAGGAAAATTAGGTTCTATACAAACTTGGAGAGTGGAAAAAGCTTTTATTCTAAGGATGATGTTATTGGATATATTAAAAGCGTTCAGTCTCAAAAGTCTTCACCAACTTCAAGTCGCATCAAAACGCAGTCAGGAAATAGTCCAGTGCAACTCACAGTAAAAGCAAATGAACGCCCTGAATGGTTGCCTGCTGGCTGGAAAGTGGAGTCAAGAACACGAATGAGTGGTTCGAATGTTGGAGGAGTATACAAGTGTTACATTGATCCAGTGACAGGCAACAGATTTTATTCTAAGCCAGAGGTATTTCGATACCTCAGAACAGTGAAAAACAAAGTGTGCACATTGAAGGAGAGAAAGACAAGCAACGGCAAGAAGTCTAGAACCCATGTTGTTATTGAGCATTATAAAGATGAAGATTTGCCGCCTGGATGGATAAAGGAGATCAAGATCAGAGAAAAAGCAGATGGCATTAGGAAAGATCCCTTTTACATAGATCCAAAATCTGGATATGTATTCCGCTCCAAGAAGGACGTTTTACGCTATCTTGAGACCGGAGAGATCAGTAGACATGCATTTAAACCAAAGGAAGGGGTTGATAATGATCAAGAATCGATTAATCACAAAATAATATCAAGCCCTTCTACTGCTAAAGGACAGAAACCAGAGCACCCTACAGCAACCCCACAACCTCTTGCAGATGTTGTAGGGAAGGAAATGCCAACAGAGAGCAGTTCAGAATTTCCAGGAGACCAAATTCTACTACCATCGGGGCGATATGGGAACCTGTCTTCTGAACTGAATGCTTCTGTTTCGCGTGTTGGAACTGTCACAAAGATTGTTTCGTCGCTGGTCAGGGAGCCTTCTGAAATCAAAGAGAAAAGTCGGAGAAGTTCAGCATCTCCTGAACCTGATCTTCCAGATGGTAAGGAAACTGAAAGAGCATCAGATGATGTACCAGTTTCAACTTCTGCTTCTGAGTTGGAGCAAGAGAAGGCATTGCCAAAAGCTGAAAAGCAAGAAAGTAATAAAGTTGATCCTGAAAACACTCCACTTTCAACCACTGCATCGAAGTTGCAACAAGAGAAGACTGCAATCTGTGATGTGATGGAAATGGGTGACAATGGGGAAAAGATAGAGACAGAACGAGATGACAATGGGGAAAATACAGAGACGGAAGGAGGCGACAATGGGGAACATACAGAAACTAAAAGAGTTGACAGTAGGAAAAAGACGAAGACAAGGAGGTTCAAGAAGAAGAAAGATATCAGCTTGCCTCGAAGGTCTTCGAAACGACTTGCTGGACGAAAACCAGAGTCGGCGCGTAAAGTAGAGGCAAAAGAAGTTCCTCAAGCTTCGAATAGAAACTGTCTTACTAAAGTTAGTCCAGATGCTGATAAAGCATGTCAGCAGCACAATGTAGGGCCAGAAAGGGTCAATGAAGATCATGGATCTAAATTCAAGGACATACCATTGCATGAAAATCCTTCTAATAAGAGGAAAACCCCTCCGGAATGCGGCCTAGATGTCCCACAAGAGAAAATACAGAGAATACGAACTGAAAAAAAGGATGATGTACAGATTGAAGCGCAGCTGAGTGTTCCAATTGCTGAATTTTGGTCAGACCCATGTCTGGAATTTGCAATCAAGACCCTTACAGGCGCATTGCCAGTGGAGAACGCAACCACCACCGATGGGCTAGTTTCTGATCCTACAATTGATTTCCTGCAAGGGCAGAAATCAGTCAAAAATGGTTCGGGAAGCTGCATGGATAAGAGAACTCAAGAGAACACAAAATTCAAGAACAAGAAAGAGTTCACATCAAATCGTCAATCTTCAAGTACTAATGGGCTCAAACCTGAATTGGCATCAAATATAATATCCTTTCAACAAGCAAACGATCGTTCAAATGAAGCTGTTCTAGCTTTCAATTTATCAGACAGTGGAATACTTGGAGAACCACAGAATGAACCGTGTAAAACATCTTGCCAAAAATTTCCACCCAGAGAGCTGCATCACCCTCCACCGGATAGGATCAATACATGTCACGAGAGCAACAAAATGGCGCTCGATGATCTGAATCAAAAGCATCAAACGAAAGACACAACCTCTGAAACTCCAATAGCCTTCCCATTTGGAGATTCCTGGGCAGACCCGTGCTTGGATTTTGCATTCAAGACTCTCACGGGTGCAATACCAATAGAAGGTAGTCTGGAAATTCAAAGCTACTTTGAGGAGCGAATCGAGTCCTCTCGAAGCCAAAGAGAGAGTAGCATAGCGCTTCCAGATTATGGATCCCCGAACTTCTTCCAAAACGATATATCGTCCCACTTTGATGGACCCGAAAAATCTGGTTCAGTACAGCACTTGAGTTTAGATCCTCTGCTGGGGAATGTGAATCTACCAAGCTGCAGTGGGTTCACTTCTCAACAGCAGCCTCGCGTAGATAGAAACAGACCTTTCAAGGGAAGGTGAAGTTTTTGAGGGAAGTGTAGCTTTTGGATGTAATAACAGCACAGGTCAGGTCTTGAGAAGAACGGCTCATTGCTCTTTTCTTCTTTTTAGCAAATCTGTATTATAATGGATGCTCCAATCTGGCATTTCAAATTCAGTAACTCCCACGTCAAACTCGAACCACTCTGTACCCTTTGCCAGAAATAGAAGAAAACAAATTCCTAATTTTTTTTATTGAAACAACTAACACTAGAATCGAATTGTTTGGATGTGATTAATTAGTAAAAAATCCAAAACAAAAACACATACATGAATGTTTGATGAGTTGTTATCTAATATTTGATGCATTGTTGATATTCCTTAAGAAATTTCTGATTAGCTCAAGAATATAACAAGAACGTTCATTACAACGAAACCAACTTTATTCTTAACCAACAATGACGACACGCCAAACTCGAGTTTAGCTTAATTTGTTAAAGTATATTATGTAGATTGAGAATTTAGAGGTTTAAATATTCACTCAGAAAAACTGATGACAAACAACATGTAGGAAATTCAGACACAACAAAGATCTTCTGATCTCTGAACACATTGGATTCGAAATCCCTCAAACATACAATTAGCAATCATGGAGTAGCGGTGGATCTCATTCTCCATCTGCGGATTGCTTCCATCCACCATAAGCTTCGTCTTCCCCTTGAAAATCTGTTGCAGTTCTCTCCTGCAGGCAGAGAATCGAAGTGTTAATAGCAAAATTAGCATAGCAAATGCTTATAGACAAGCCAAAAAGTCGAAATTTTATCTGATAATTCTACAACATAGTCGGAAGTAAAGAAGGAGAGCAACCTCAGGAGCGAAAGTAAGGCCAACTCGGATCTCTCCGCGGTATTCTGCATCCTTGACAACGTTATATGGTGTTGCAGGGAGGGTTTTTTCAAGGTAAACAGGTTCCAGAGGAATGCTGCAAATAATATACAGGGCATTTGAACAGGCTTGTGTTTTCATTATCAAACAGTCCTCATAGAACAAAATATACCCCATGATCTAAGCTAGTTTTTCGCTTTAGCGCATAGAAAGACCGTGCCAAGCAGATCAGAAAAATAACCATTCATACCAAGCTCAAAAATCCACTTCCTTTTCAATTAAAGCCTTGATTATGAGGAATAATTTGTTACCAGTGTAGAGGTTGGTTGTTCCTAAGAGAATTAAGAGTCATTTTTACTTACGTTACTTCGCCCACAAAGTCATCTTGCGTGCCACTATCACTGTCCAGTATCTTCAGGGTGATCTCTTCAGCGCCATCAGATATGGTGAATACAAAAGTCTCATTCCATTCAGGCTCGGACCCCTTTCCTGTATGCAATCAATAAACAATTCTGATGGTAGAAACACTTCCAAGTTTTTTAAAATAGGAGATGGTAGAGATTTGAGGATTATATTGAACATAAACCAACCCGACGAAACACTGCTTTTCTGCTCCTGTGAGCGGCAAGTAAGAACAACATAAGGATCCATGTCACC

Coding sequence (CDS)

ATGGTGTCTAAGGGTTCGCCGGACTGGCTTCCCTCCGGCTGGACTGTGCAGTTTAAAGTCCAGAAGACGGGCAGGAAAATTAGGTTCTATACAAACTTGGAGAGTGGAAAAAGCTTTTATTCTAAGGATGATGTTATTGGATATATTAAAAGCGTTCAGTCTCAAAAGTCTTCACCAACTTCAAGTCGCATCAAAACGCAGTCAGGAAATAGTCCAGTGCAACTCACAGTAAAAGCAAATGAACGCCCTGAATGGTTGCCTGCTGGCTGGAAAGTGGAGTCAAGAACACGAATGAGTGGTTCGAATGTTGGAGGAGTATACAAGTGTTACATTGATCCAGTGACAGGCAACAGATTTTATTCTAAGCCAGAGGTATTTCGATACCTCAGAACAGTGAAAAACAAAGTGTGCACATTGAAGGAGAGAAAGACAAGCAACGGCAAGAAGTCTAGAACCCATGTTGTTATTGAGCATTATAAAGATGAAGATTTGCCGCCTGGATGGATAAAGGAGATCAAGATCAGAGAAAAAGCAGATGGCATTAGGAAAGATCCCTTTTACATAGATCCAAAATCTGGATATGTATTCCGCTCCAAGAAGGACGTTTTACGCTATCTTGAGACCGGAGAGATCAGTAGACATGCATTTAAACCAAAGGAAGGGGTTGATAATGATCAAGAATCGATTAATCACAAAATAATATCAAGCCCTTCTACTGCTAAAGGACAGAAACCAGAGCACCCTACAGCAACCCCACAACCTCTTGCAGATGTTGTAGGGAAGGAAATGCCAACAGAGAGCAGTTCAGAATTTCCAGGAGACCAAATTCTACTACCATCGGGGCGATATGGGAACCTGTCTTCTGAACTGAATGCTTCTGTTTCGCGTGTTGGAACTGTCACAAAGATTGTTTCGTCGCTGGTCAGGGAGCCTTCTGAAATCAAAGAGAAAAGTCGGAGAAGTTCAGCATCTCCTGAACCTGATCTTCCAGATGGTAAGGAAACTGAAAGAGCATCAGATGATGTACCAGTTTCAACTTCTGCTTCTGAGTTGGAGCAAGAGAAGGCATTGCCAAAAGCTGAAAAGCAAGAAAGTAATAAAGTTGATCCTGAAAACACTCCACTTTCAACCACTGCATCGAAGTTGCAACAAGAGAAGACTGCAATCTGTGATGTGATGGAAATGGGTGACAATGGGGAAAAGATAGAGACAGAACGAGATGACAATGGGGAAAATACAGAGACGGAAGGAGGCGACAATGGGGAACATACAGAAACTAAAAGAGTTGACAGTAGGAAAAAGACGAAGACAAGGAGGTTCAAGAAGAAGAAAGATATCAGCTTGCCTCGAAGGTCTTCGAAACGACTTGCTGGACGAAAACCAGAGTCGGCGCGTAAAGTAGAGGCAAAAGAAGTTCCTCAAGCTTCGAATAGAAACTGTCTTACTAAAGTTAGTCCAGATGCTGATAAAGCATGTCAGCAGCACAATGTAGGGCCAGAAAGGGTCAATGAAGATCATGGATCTAAATTCAAGGACATACCATTGCATGAAAATCCTTCTAATAAGAGGAAAACCCCTCCGGAATGCGGCCTAGATGTCCCACAAGAGAAAATACAGAGAATACGAACTGAAAAAAAGGATGATGTACAGATTGAAGCGCAGCTGAGTGTTCCAATTGCTGAATTTTGGTCAGACCCATGTCTGGAATTTGCAATCAAGACCCTTACAGGCGCATTGCCAGTGGAGAACGCAACCACCACCGATGGGCTAGTTTCTGATCCTACAATTGATTTCCTGCAAGGGCAGAAATCAGTCAAAAATGGTTCGGGAAGCTGCATGGATAAGAGAACTCAAGAGAACACAAAATTCAAGAACAAGAAAGAGTTCACATCAAATCGTCAATCTTCAAGTACTAATGGGCTCAAACCTGAATTGGCATCAAATATAATATCCTTTCAACAAGCAAACGATCGTTCAAATGAAGCTGTTCTAGCTTTCAATTTATCAGACAGTGGAATACTTGGAGAACCACAGAATGAACCGTGTAAAACATCTTGCCAAAAATTTCCACCCAGAGAGCTGCATCACCCTCCACCGGATAGGATCAATACATGTCACGAGAGCAACAAAATGGCGCTCGATGATCTGAATCAAAAGCATCAAACGAAAGACACAACCTCTGAAACTCCAATAGCCTTCCCATTTGGAGATTCCTGGGCAGACCCGTGCTTGGATTTTGCATTCAAGACTCTCACGGGTGCAATACCAATAGAAGGTAGTCTGGAAATTCAAAGCTACTTTGAGGAGCGAATCGAGTCCTCTCGAAGCCAAAGAGAGAGTAGCATAGCGCTTCCAGATTATGGATCCCCGAACTTCTTCCAAAACGATATATCGTCCCACTTTGATGGACCCGAAAAATCTGGTTCAGTACAGCACTTGAGTTTAGATCCTCTGCTGGGGAATGTGAATCTACCAAGCTGCAGTGGGTTCACTTCTCAACAGCAGCCTCGCGTAGATAGAAACAGACCTTTCAAGGGAAGGTGA

Protein sequence

MVSKGSPDWLPSGWTVQFKVQKTGRKIRFYTNLESGKSFYSKDDVIGYIKSVQSQKSSPTSSRIKTQSGNSPVQLTVKANERPEWLPAGWKVESRTRMSGSNVGGVYKCYIDPVTGNRFYSKPEVFRYLRTVKNKVCTLKERKTSNGKKSRTHVVIEHYKDEDLPPGWIKEIKIREKADGIRKDPFYIDPKSGYVFRSKKDVLRYLETGEISRHAFKPKEGVDNDQESINHKIISSPSTAKGQKPEHPTATPQPLADVVGKEMPTESSSEFPGDQILLPSGRYGNLSSELNASVSRVGTVTKIVSSLVREPSEIKEKSRRSSASPEPDLPDGKETERASDDVPVSTSASELEQEKALPKAEKQESNKVDPENTPLSTTASKLQQEKTAICDVMEMGDNGEKIETERDDNGENTETEGGDNGEHTETKRVDSRKKTKTRRFKKKKDISLPRRSSKRLAGRKPESARKVEAKEVPQASNRNCLTKVSPDADKACQQHNVGPERVNEDHGSKFKDIPLHENPSNKRKTPPECGLDVPQEKIQRIRTEKKDDVQIEAQLSVPIAEFWSDPCLEFAIKTLTGALPVENATTTDGLVSDPTIDFLQGQKSVKNGSGSCMDKRTQENTKFKNKKEFTSNRQSSSTNGLKPELASNIISFQQANDRSNEAVLAFNLSDSGILGEPQNEPCKTSCQKFPPRELHHPPPDRINTCHESNKMALDDLNQKHQTKDTTSETPIAFPFGDSWADPCLDFAFKTLTGAIPIEGSLEIQSYFEERIESSRSQRESSIALPDYGSPNFFQNDISSHFDGPEKSGSVQHLSLDPLLGNVNLPSCSGFTSQQQPRVDRNRPFKGR

Homology

[Close]

BLAST of Cp4.1LG05g03710 vs. Swiss-Prot
Match: MBD13_ARATH (Methyl-CpG-binding domain-containing protein 13 OS=Arabidopsis thaliana GN=MBD13 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 5.6e-09
Identity = 69/258 (26.74%), Postives = 119/258 (46.12%), Query Frame = 1


Query: 142 RKTSNGKKSRTHVVIEHYKDEDLPPGWIKEIKIREKADG-IRKDPFYIDPKSGYVFRSKK 201
           R   NG+K +  V++E    + LP GWIK+++I  ++    R+DPF+IDPKS Y+F+S K
Sbjct: 19  RVRKNGRKDK--VIVEKSAAQGLPEGWIKKLEITNRSGRKTRRDPFFIDPKSEYIFQSFK 78

Query: 202 DVLRYLETGEISRHAFKPKEGVDNDQESINHKIISSPSTAKGQKPEHPTATPQPLADVVG 261
           D  RY+ETG I  +A K KE    D +S N K +        +  +      + + DV  
Sbjct: 79  DASRYVETGNIGHYARKLKESDIEDDDSGNGKTVLRLEYVDKRSADDVLEKEKTIDDVRR 138

Query: 262 KEMPTESSSEFPGDQILLPSGRYGNLSSELNASVSRVGTVTKIVSSLVREPSEIKEKSRR 321
            +    SSS+       + S    +LS   +  +  +G   +     V++P E +  ++R
Sbjct: 139 SKRRNLSSSDEHSKNCKMTS----DLSIVTSQVLEDLGKKEE-----VKDPIEKQLIAKR 198

Query: 322 SSASPEPDLPDGKETERASDDVPVSTSASELEQEK---------ALPKAEKQESNKVDPE 381
            + S          TE    D+  + S+S  + EK           PK E     + + +
Sbjct: 199 VTRSQ----TKASTTEEVVVDLKRNLSSSNAKSEKDSVNSSVRSQKPKKEAVMKEEEEQD 258

Query: 382 NTPLSTTASKLQQEKTAI 390
           ++    T SK++++K  +
Sbjct: 259 SSEKRITRSKVEEKKNEL 261

[Close]

BLAST of Cp4.1LG05g03710 vs. Swiss-Prot
Match: MBD7_ARATH (Methyl-CpG-binding domain-containing protein 7 OS=Arabidopsis thaliana GN=MBD7 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.7e-08
Identity = 46/122 (37.70%), Postives = 57/122 (46.72%), Query Frame = 1


Query: 86  LPAGWKVESRTRMSGSNVGGVYKCYIDPVTGNRFYSKPEVFRYLRTVKNKV-CTLKERKT 145
           LP GW VE   R +   +    K Y++  TG RF S   V RYLR  +N +   L+  + 
Sbjct: 116 LPRGWSVEEVPRKNSHYID---KYYVERKTGKRFRSLVSVERYLRESRNSIEQQLRVLQN 175

Query: 146 SNGKKSRTHVVIEHYKDEDLPPGWIKEIKIREKADGIRKDPFYIDPKSGYVFRSKKDVLR 205
             G          H KD  LP GWI E K R  +  I  D  YI+P +G  FRS   V R
Sbjct: 176 RRG----------HSKDFRLPDGWIVEEKPRRSSSHI--DRSYIEPGTGNKFRSMAAVER 222

Query: 206 YL 207
           YL
Sbjct: 236 YL 222

[Close]

BLAST of Cp4.1LG05g03710 vs. Swiss-Prot
Match: MBD6_ARATH (Methyl-CpG-binding domain-containing protein 6 OS=Arabidopsis thaliana GN=MBD6 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 3.4e-06
Identity = 34/93 (36.56%), Postives = 44/93 (47.31%), Query Frame = 1


Query: 58  SPTSSRIKTQSGNSPVQLTVKANERP------EWLPAGWKVESRTRMSGSNVGGVYKCYI 117
           S  S RI   +G   V    ++  R        WLP GW+VE + R SG+  G V K Y 
Sbjct: 47  SGESVRIGMANGTDQVNHQTESKSRKRAAPGDNWLPPGWRVEDKIRTSGATAGSVDKYYY 106

Query: 118 DPVTGNRFYSKPEVFRYLRTVKNKVCTLKERKT 145
           +P TG +F S+ EV  YL    +K  T K   T
Sbjct: 107 EPNTGRKFRSRTEVLYYLEHGTSKRGTKKAENT 139

[Close]

BLAST of Cp4.1LG05g03710 vs. Swiss-Prot
Match: MBD5_ARATH (Methyl-CpG-binding domain-containing protein 5 OS=Arabidopsis thaliana GN=MBD5 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 7.5e-06
Identity = 29/68 (42.65%), Postives = 36/68 (52.94%), Query Frame = 1


Query: 85  WLPAGWKVESRTRMSGSNVGGVYKCYIDPVTGNRFYSKPEVFRYLR--TVKNKVCTLKER 144
           WLP  W+ E R R SG+  G V K Y +P+TG +F SK EV  YL   T K K     E 
Sbjct: 34  WLPPDWRTEIRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHGTPKKKSVKTAEN 93

Query: 145 KTSNGKKS 151
             S+ + S
Sbjct: 94  GDSHSEHS 101

[Close]

BLAST of Cp4.1LG05g03710 vs. TrEMBL
Match: A0A0A0KKL3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G154900 PE=4 SV=1)

HSP 1 Score: 1035.0 bits (2675), Expect = 5.0e-299
Identity = 588/891 (65.99%), Postives = 670/891 (75.20%), Query Frame = 1


Query: 1   MVSKGSPDWLPSGWTVQFKVQKTGRKIRFYTNLESGKSFYSKDDVIGYIKSVQSQKSSPT 60
           MV+KGSPDWLPSGWTVQ+KVQKTGRKIRFYTNLE+GKSFY KDDVIGYIKS QSQKS PT
Sbjct: 1   MVAKGSPDWLPSGWTVQYKVQKTGRKIRFYTNLENGKSFYYKDDVIGYIKSTQSQKSQPT 60

Query: 61  SSRIKTQSGNSPVQLTVKANERPEWLPAGWKVESRTRMSGSNVGGVYKCYIDPVTGNRFY 120
           S  +KTQSGNSP+QLTVK+NE PEWLPAGWKVESRTRMSGSNVG VYKCYIDPVT +RFY
Sbjct: 61  SRGVKTQSGNSPLQLTVKSNEHPEWLPAGWKVESRTRMSGSNVGAVYKCYIDPVTDSRFY 120

Query: 121 SKPEVFRYLRTVKNKVCTLKERKTSNGKKSRTHVVIEHYKDEDLPPGWIKEIKIREKADG 180
           SKPEVFR+LRTVKNK+CTLKER+TSNGKKSR+ VVIEHYKDEDLPPGWIKEIKI+EKADG
Sbjct: 121 SKPEVFRHLRTVKNKLCTLKERRTSNGKKSRSRVVIEHYKDEDLPPGWIKEIKIKEKADG 180

Query: 181 IRKDPFYIDPKSGYVFRSKKDVLRYLETGEISRHAFKPKEGVDNDQESINHKIISSPSTA 240
           IRKDPFYIDPKSGYVFRSKK+V RYLETGEISRHAFKPKEG D DQE I+ K   S ST 
Sbjct: 181 IRKDPFYIDPKSGYVFRSKKEVFRYLETGEISRHAFKPKEGGDEDQELISDK--KSRSTV 240

Query: 241 KGQKPEHPTATPQPLADVVGKEMPTESSSEFPGDQILLPSGRYGNLSSELNASVSRVGTV 300
           +GQK E   ATPQ LA   G+EM T   SE PG  I     R    S+  +A V  V TV
Sbjct: 241 RGQKLEQSAATPQSLA---GEEMATGRRSERPGVHIQQLKQRQNVSSALKDALVLPVETV 300

Query: 301 TKIV---SSLVREPSEIKEKSRRSSASPEPDLPDGKETER-ASDDVPVSTSASELEQE-K 360
            +I+    ++++E +EI+EKS +  +SP+ D  +G E ER +SD+V VS  ASE +QE K
Sbjct: 301 EEIILPQEAVIKESTEIEEKSHKDLSSPKADHTEGNENERVSSDNVAVSICASESDQEIK 360

Query: 361 ALPKAEKQESNKVD----PENTPLSTTASKLQQEKTAICDVMEMGDNGEKIETERDDNGE 420
           ALPK +K ESNK++    P+N+PL  TASKL+ EK AI + ME                 
Sbjct: 361 ALPKVQKLESNKIEIVVTPDNSPLINTASKLEHEKIAISNTME----------------- 420

Query: 421 NTETEGGDNGEHTETKRVDSRKKTKTRRFKKKKDISLPRRSSKRLAGRKPESARKVEAKE 480
                 G NG           +KTKTR+ KKKKD++LPRRSSKRLAG +PE   K +AKE
Sbjct: 421 -----SGVNG-----------RKTKTRKSKKKKDVNLPRRSSKRLAGLEPELVPKEDAKE 480

Query: 481 VPQASNRNCLTKVSPDA-------------DKACQQHNVGPERVNEDHGSKFKDIPLHEN 540
           VPQ SNRN  T+VSPDA             DKA QQ +V  E+ N+DH    KD PL EN
Sbjct: 481 VPQVSNRNIFTEVSPDAGLAVKADADVHNTDKASQQLDVRSEKDNKDHTPNHKDTPLREN 540

Query: 541 ---------PSNKRKTPPECGLDVPQEKIQRIRTEKKDDVQIEAQLSVPIAEFWSDPCLE 600
                    PSNKRKTP  CG+D P+EKIQR+ TEKKDD ++EAQL+VPIA+FWSDPCLE
Sbjct: 541 HKDMSLCENPSNKRKTPLACGVDAPEEKIQRVETEKKDDGKMEAQLNVPIADFWSDPCLE 600

Query: 601 FAIKTLTGALPVENATTTDGLVSDPTIDFLQGQKSVKNGSGSCMDKRTQENTKFKNKKEF 660
           FAIKTLTGALPVENATTT+  VS+PT++FLQGQ SVKNG GS M+KRTQ N + +NKKE 
Sbjct: 601 FAIKTLTGALPVENATTTNEPVSNPTVNFLQGQSSVKNGPGSRMNKRTQGNKRIRNKKEL 660

Query: 661 TSNRQSSSTNGLKPELASNIISFQQA--NDRSNEAVLAFNLSDSGILGEP-QNEPCKTSC 720
           T++ QS S NGLKPELASNIISF QA  N  SNEAVLAFNLSD  I G+P +NE  KTSC
Sbjct: 661 TTSSQSPSINGLKPELASNIISFDQANPNHHSNEAVLAFNLSDGRIHGQPSKNEQYKTSC 720

Query: 721 QKFPPRELHHPPP-------DRINTCHESNKMALDDLNQKHQTKD-TTSETPIAFPFGDS 780
           +   P ELHH  P       + I+ CHESN M LDD +Q  QT D  TSE P++FPFGDS
Sbjct: 721 EILTPSELHHSLPQVDSERFNGISACHESNNMMLDDPHQILQTNDHMTSEVPLSFPFGDS 780

Query: 781 WADPCLDFAFKTLTGAIPIEGSLEIQSYFEERIESSRSQRESSIALPDYGSPNFFQNDIS 840
           WADPCLDFAFKTLTGAIPI+ SLEIQS+FEER+ESSRSQ++SS ALPD+GSPN FQNDIS
Sbjct: 781 WADPCLDFAFKTLTGAIPIDDSLEIQSFFEERLESSRSQKDSSPALPDFGSPNLFQNDIS 840

Query: 841 SHFDGPEKSGSVQHLSLDP--LLGNVNLPSCSGFTSQQQPRVDRNRPFKGR 848
           SHFDGPEKS S QHLSLDP   LGNV+LPSCSGFTSQQQ  VDRNR F+GR
Sbjct: 841 SHFDGPEKSVSGQHLSLDPQLSLGNVSLPSCSGFTSQQQSSVDRNRSFRGR 853

[Close]

BLAST of Cp4.1LG05g03710 vs. TrEMBL
Match: A0A067K0Z5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20630 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 7.0e-67
Identity = 259/819 (31.62%), Postives = 379/819 (46.28%), Query Frame = 1


Query: 1   MVSKGSPDWLPSGWTVQFKVQKTGRKIRFYTNLESGKSFYSKDDVIGYIKSVQSQKSSPT 60
           M ++ SP+ LP GWTVQF V KTGRKI++Y N  +G+ ++S DD I Y +   +Q     
Sbjct: 1   MTAEYSPEELPHGWTVQFNVLKTGRKIKYYLNSGTGQKYFSTDDFIRYFRGQGTQLDQHH 60

Query: 61  SSRIKTQSGNSPVQLTVKANERPEWLPAGWKVESRTRMSGSNVGGVYKCYIDPVTGNRFY 120
            S+      +   QL   ANERPEWLP GW VE +TR SG   G VYKCY+DP TG +FY
Sbjct: 61  PSKSLIGLPSKKKQLIEYANERPEWLPNGWVVELKTRKSGDASGKVYKCYVDPSTGCKFY 120

Query: 121 SKPEVFRYLRTVKNKVCTLKERKTSNGKKSRTHVVIEHYKDEDLPPGWIKEIKIREKADG 180
           SKP V RYL T+K +  T K+++T       + V  E    +DLPPGWIKEIKI   A+G
Sbjct: 121 SKPAVVRYLETIKQRSYTPKQKETLKSALPTSEVKFEKSTVDDLPPGWIKEIKITANANG 180

Query: 181 IRKDPFYIDPKSGYVFRSKKDVLRYLETGEISRHAFKPKEGVDNDQESINHKIISSPSTA 240
           IRKDP+YIDP  GYVFRSK+DV RYLETG+IS+HAF PK      +     +I+ SP+ A
Sbjct: 181 IRKDPYYIDPIKGYVFRSKRDVERYLETGKISKHAFLPK------KRHTGERILPSPA-A 240

Query: 241 KGQKPEHPTATPQPLADVVGKEMPTESSSEFPGDQILLPSGRYGNLSSELNASVSRVGTV 300
           K QK +HP    Q L      ++ + +SSE   D +    G+          SV+ V T+
Sbjct: 241 KRQKVKHPAHGQQLLTGKGRSDVDSRTSSE--ADSLRKSRGK----------SVTSV-TM 300

Query: 301 TKIVSSLVREPSEIKEKSRRSSASPEPDLPDG----KETERASDDVPVSTSASELEQEK- 360
             +V +L           R S  SP  ++ D     KE    +   P     S   Q+K 
Sbjct: 301 LPVVGTL----------DRPSQKSPRDNVMDNDVKYKENSNRNFSAPTKAEVSRRNQDKR 360

Query: 361 ---------ALPKAEKQESNKVDPENTPLSTTASKLQQEKTAICDVMEMGDNGEK----- 420
                     +PK   ++   ++ E   +S   S  ++ + ++C       +G+K     
Sbjct: 361 TNVCDGYGLLIPKGNNEQGQSLESE---ISRDESSKRKTENSLCK-----SSGKKWFNLP 420

Query: 421 ---------IETERDDNG----ENTETEG--GDNGEHTETKRVDS-RKKTKTRRFKKKKD 480
                    IE E  DN      N+E +   G N   +  K  +S +++T T +   K+ 
Sbjct: 421 RRSSRRLAGIEPELVDNSLLVQANSEADNKQGQNSYESAIKGDESYKRRTHTSKADNKRG 480

Query: 481 ISLPRRSSKRLAGRKPE----SARKVEA--KEVPQASNRNCLT---KVSPDADKACQQHN 540
           + LP RSSKRLAG +PE    S   V+A  K +        L    K    ADK C Q  
Sbjct: 481 L-LPCRSSKRLAGIEPELVANSVSIVQALPKTIKSPKIEAILAVGLKSDVLADKKCDQ-- 540

Query: 541 VGPERVNE--DHGSKFKDIPLHENPSNKRKTPPECGLDVPQEKIQRIRTEKKDDVQIEAQ 600
           +  E + +  DH S   D PL E+ S K         D     +      K++  ++ + 
Sbjct: 541 IQAESITQILDHSSSNADNPLLEDTSKKNPK-----YDTTCSVLSEANVSKRNQCEMVSA 600

Query: 601 LSVPIAEFWSDPCLEFAIKTLTGALPVENATTTDGLVSDPTIDFLQGQKSVKNGSGSCMD 660
           +  P+              T T     E  +   G          +GQ  ++N      +
Sbjct: 601 VDKPVL-------------TPTADTREEENSLESGAKG-------RGQGKIQNILIRTSN 660

Query: 661 KRTQENTKFKNKKEFTSNRQSSSTNGLKPELASNIISFQQANDRS-----NEAVLAFNLS 720
           K+     +  +K+            GL+PELA+N  S  QA   +     +E++ A +L+
Sbjct: 661 KKGINLPRRSSKR----------LAGLEPELAANSESSAQAVQNAKTSCRSESIQAASLT 720

Query: 721 DSGILGEPQNEPCKTSCQ-KFPPRELHHPPPDRINTCHESNKMAL---------DDLNQK 759
              +  +P ++P K   +  F P  L              N++++           + + 
Sbjct: 721 SDALANKP-SQPLKAEPRTDFTPHALTDFSNSLTGELSSQNQVSIHGQAFSKDQSQVLKT 742

[Close]

BLAST of Cp4.1LG05g03710 vs. TrEMBL
Match: A0A0D2P1S4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G022700 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.2e-53
Identity = 152/383 (39.69%), Postives = 206/383 (53.79%), Query Frame = 1


Query: 1   MVSKGSPDWLPSGWTVQFKVQKTGRKIRFYTNLESGKSFYSKDDVIGYIKSVQSQKSSPT 60
           M  + SPDWLP+GWT +F+ QKTGR+I  Y NL +G+ F++KDD+I Y K+    +S   
Sbjct: 1   MTEETSPDWLPAGWTQEFRFQKTGRRITHYVNLATGQKFFTKDDLIRYTKTETKTESKQY 60

Query: 61  SSRIKT------QSGNSPVQLTVKANERPEWLPAGWKVESRTRMSGSNVGGVYKCYIDPV 120
             R+ T       S NS V   VK NE PEWLP  W VE +T  SG  +G   K Y+DP 
Sbjct: 61  DDRLLTLKQITKPSTNSQVNAAVKENECPEWLPKNWFVEVKTHKSGEFIGKRVKIYVDPS 120

Query: 121 TGNRFYSKPEVFRYLRTVKNKVCTLKERKTSNGKKSRTHVVIEHYKDEDLPPGWIKEIKI 180
           TG RFYSKP VFR+L+  + +    K  K      SR  VVIE    +DLP GWIKEIKI
Sbjct: 121 TGLRFYSKPAVFRFLKQAEQR--NRKTNKKKQAAYSRKKVVIEKSTVDDLPAGWIKEIKI 180

Query: 181 REKADGIRKDPFYIDPKSGYVFRSKKDVLRYLETGEISRHAFKPKEGVDNDQESINHKII 240
           +  A+G+RKDP+Y DP SGYVFRSKK VL YLETGEI+R AF P +   ND +++  +  
Sbjct: 181 QRNANGVRKDPYYTDPVSGYVFRSKKAVLHYLETGEIARSAFLPPK--SNDDQNLTDEDG 240

Query: 241 SSPSTAKGQK-----PEHPTATPQPLADVVGKEMPTESSSEFPGDQILLPSGRYGNLSSE 300
           S    AK QK      +    T    +D+ G E  TE S E   D+    +G    L++E
Sbjct: 241 SQLPEAKRQKVKLLATKRQLVTDGETSDLSGLE--TEISKEGQIDEDCADTG----LATE 300

Query: 301 LNASVSRVGTVTKIVSSLVREPSEIKEKSRRSS-ASPEPDLPDGKETERASDDVPVSTSA 360
            N   +   + +  ++       + K  S  +  AS   D  D KE    S     ++  
Sbjct: 301 RNPKTAEKSSQSSSIAHKASNGEQGKIVSADNMLASTAAD--DEKEKSNISSS---NSGK 360

Query: 361 SELEQEKALPKAEKQESNKVDPE 372
           S+ ++E  LP       ++++PE
Sbjct: 361 SKNKKELDLPHGSSNRLDQLEPE 368

[Close]

BLAST of Cp4.1LG05g03710 vs. TrEMBL
Match: V7CK04_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G155600g PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 1.3e-49
Identity = 227/733 (30.97%), Postives = 335/733 (45.70%), Query Frame = 1


Query: 78  KANERPEWLPAGWKVESRTRMSGSNVGGVYKCYIDPVTGNRFYSKPEVFRYLRTVKN--- 137
           K+NE PEWLP GW VES+TR SG+N+G  YKCYIDP TG +FYSKPEV RYL TV +   
Sbjct: 27  KSNEHPEWLPDGWIVESKTRKSGANMGCGYKCYIDP-TGCKFYSKPEVLRYLETVNSNSH 86

Query: 138 -------------------------KVCTLKERKTSNGKKSRTHVVIEHYKDEDLPPGWI 197
                                    ++  +K +K+SNG +     V E    EDLPPGW 
Sbjct: 87  SSKKEKMRKSNDAVEKSTAEDLPPDQIADVKMKKSSNGYRIDPDTV-EKSPVEDLPPGWT 146

Query: 198 KEIKIREKADGIRKDPFYIDPKSGYVFRSKKDVLRYLETGEISRHAFKPKEGVDNDQESI 257
            E K+R+   G RKD FYIDP SGYVFRSKKD LRY+++G+IS  A KP +  + D++ +
Sbjct: 147 IEAKVRKGGTGNRKDLFYIDPVSGYVFRSKKDALRYVKSGDISACAIKPFKRQNQDEDKV 206

Query: 258 NHKIISSPSTAKGQKPEHPTATPQPLADVVGKEMPTESSSEFPGDQILLPSGRYGNLSSE 317
           ++ +    S  +   P H T   +      GK +  +S  +   +   LP G        
Sbjct: 207 SNAV--EKSIIEDLPPGHLTKV-KIRKGSNGKRIDPDSDKKSQVED--LPPG-------- 266

Query: 318 LNASVSRVGTVTKIVSSLVREPSEIKEKSRRSSASPEPDLPDGKETERAS-DDVPVSTSA 377
                        I  + VR+    K+K  +SS   +  L       R S DDV      
Sbjct: 267 ------------WITEAKVRKGGTGKKKDLQSSTGKKQKLKQSATNRRHSVDDVLEKNHV 326

Query: 378 SELEQEKALPKAEKQESNKVDPENTPLSTTASKLQQEKTAI------CDVMEMG------ 437
             + +      +EK  SN+     T  S  A +  +  + +      C   E        
Sbjct: 327 VNMMEH----ASEKNHSNR-SLSKTKESNVARRFSRRLSGVEHDQLTCVANEQALQVPKR 386

Query: 438 DNGEKIE-TERDDNGENTETEGG--DNGEHTETKRVDSRKKTKTRRFKKKKDISLPRRSS 497
           D G+KI   + D   ++++   G  + G   + K + +  K+ T   KK+K I    R+S
Sbjct: 387 DFGKKISILDTDLTNKSSQLPSGVLEIGREEQGKVLLNSNKSGT---KKEKQIFC--RAS 446

Query: 498 KRLAGRKPE-SARKVEAKEVPQASNRNCLTKVSPDADKACQQHNVGPERVNEDHGSKFKD 557
           KRLAG +P+  +  +  K+  ++       K   +     QQ +  P     DH +    
Sbjct: 447 KRLAGLQPKLMSNSISHKKAYKSK------KSKGEVKATLQQSDGQPVMELADHAT---- 506

Query: 558 IPLHENPSNKRKTPPECGLDVPQEKIQRIRTEKKDDVQIEAQLSVPIAEFWSDPCLEFAI 617
             ++   SNK +  PE       +  +    E   D + E   S      WSDPCLEFAI
Sbjct: 507 --INGESSNKGRKLPEATPITSNQLKKFDDKEINKDEKSELAQSFAFHYSWSDPCLEFAI 566

Query: 618 KTLTGALPVENATTTDGLVSDPTIDFLQGQKSVKNGSGSCMDKRTQENT-KFKNKKEFTS 677
           +TLTG LPVE+ +T +G       +     + V+N +G+  DK ++ N+ K KNKKE T 
Sbjct: 567 QTLTGTLPVED-STDNGNARVSETNTSPKNRLVENVTGNSSDKTSRVNSKKSKNKKEPTV 626

Query: 678 NRQ-SSSTNGLKPEL--ASNIISFQQANDRSNEAVLAFNLSDSGILGEP-QNEPCKTSCQ 737
            RQ S    G +PE+      + +       N+ V A     +G+ G P   E  K   Q
Sbjct: 627 PRQLSKRLAGNEPEVLPTEKAVEYAAPQKSCNDNVAATASLTNGVSGHPYDREESKLVVQ 686

Query: 738 KFPPRELHHPPPDRINTCHESNKMALDDL--NQKHQTKDTTSETPIAFPFGDSWADPCLD 759
                 L      +I   +++  +  + L  ++     D  S +    PFGDSW+DPCL+
Sbjct: 687 --ASDRLCRESLSKIEKSYDTKTVPNEQLRRHEDENVDDERSYSQFPTPFGDSWSDPCLE 707

[Close]

BLAST of Cp4.1LG05g03710 vs. TrEMBL
Match: A0A067EK95_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0013392mg PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.9e-49
Identity = 116/259 (44.79%), Postives = 152/259 (58.69%), Query Frame = 1


Query: 6   SPDWLPSGWTVQFKVQKTGRKIRFYTNLESGKSFYSKDDVIGYIKSVQSQ--KSSPTSS- 65
           S + LP+ WT +FKV+K GRK ++Y N+ +G+ F+SK+D++ Y+K  ++Q  + SPTSS 
Sbjct: 5   SEERLPTDWTAKFKVEKNGRKTKYYMNVRTGQKFFSKEDLLRYVKMKRTQLDEPSPTSSH 64

Query: 66  ----------------------RIKTQSGNSPVQLTVKANERPEWLPAGWKVESRTRMSG 125
                                 R K  S N  ++  V  N RP+WLP GW V+ +TR SG
Sbjct: 65  GKRHLENSSSKLVAKENKQENSRSKRHSENRSMKPVVDENNRPDWLPDGWVVDLKTRKSG 124

Query: 126 SNVGGVYKCYIDPVTGNRFYSKPEVFRYLRTVKNK--VCTLKERKTSNGKKSRTH----- 185
           S VG  YK YI+P+TG +F+S PEV R+L +VKN+   C  K   T   K   T      
Sbjct: 125 SAVGRQYKVYIEPITGCKFFSMPEVLRHLESVKNRNSECERKTTPTETSKYEGTRKVSTK 184

Query: 186 --------VVIEHYKDEDLPPGWIKEIKIREKADGIRKDPFYIDPKSGYVFRSKKDVLRY 224
                   VV+E     DLPP W KE KI++ A GIRKD ++ DP SGYVF SKKDV RY
Sbjct: 185 RERETTERVVVEKSTVVDLPPSWTKETKIKKTARGIRKDRYFTDPVSGYVFCSKKDVFRY 244

[Close]

BLAST of Cp4.1LG05g03710 vs. TAIR10
Match: AT1G63240.1 (AT1G63240.1 unknown protein)

HSP 1 Score: 67.0 bits (162), Expect = 6.3e-11
Identity = 41/124 (33.06%), Postives = 61/124 (49.19%), Query Frame = 1


Query: 1   MVSKGSPDWLPSGWTVQFKVQKTGRKIRFYTNLESGKSFYSKDDVIGYIKSVQSQKSSPT 60
           + +  +PDWLP GW     V K GR+ R YT L +GK   +KD V+ YIK  + ++    
Sbjct: 9   ITADATPDWLPVGWIAHSTVLKRGRQTRTYTQLRTGKKLSTKDQVLEYIKMEKIREKREA 68

Query: 61  SSRIKTQSGNSPVQLTVKANERPEWLPAGWKVESRTRMSGSNVGGVYKCYIDPVTGNRFY 120
             + + ++    +Q    A+ERP WLP   K E      G   G  YK  ++  T N F 
Sbjct: 69  GIK-RNKASLKALQDKETASERPSWLPDERKAELEIGYVG---GNPYKMNVN--TSNDFN 126

Query: 121 SKPE 125
           + P+
Sbjct: 129 TNPK 126

[Close]

BLAST of Cp4.1LG05g03710 vs. TAIR10
Match: AT5G52230.1 (AT5G52230.1 methyl-CPG-binding domain protein 13)

HSP 1 Score: 64.7 bits (156), Expect = 3.1e-10
Identity = 69/258 (26.74%), Postives = 119/258 (46.12%), Query Frame = 1


Query: 142 RKTSNGKKSRTHVVIEHYKDEDLPPGWIKEIKIREKADG-IRKDPFYIDPKSGYVFRSKK 201
           R   NG+K +  V++E    + LP GWIK+++I  ++    R+DPF+IDPKS Y+F+S K
Sbjct: 19  RVRKNGRKDK--VIVEKSAAQGLPEGWIKKLEITNRSGRKTRRDPFFIDPKSEYIFQSFK 78

Query: 202 DVLRYLETGEISRHAFKPKEGVDNDQESINHKIISSPSTAKGQKPEHPTATPQPLADVVG 261
           D  RY+ETG I  +A K KE    D +S N K +        +  +      + + DV  
Sbjct: 79  DASRYVETGNIGHYARKLKESDIEDDDSGNGKTVLRLEYVDKRSADDVLEKEKTIDDVRR 138

Query: 262 KEMPTESSSEFPGDQILLPSGRYGNLSSELNASVSRVGTVTKIVSSLVREPSEIKEKSRR 321
            +    SSS+       + S    +LS   +  +  +G   +     V++P E +  ++R
Sbjct: 139 SKRRNLSSSDEHSKNCKMTS----DLSIVTSQVLEDLGKKEE-----VKDPIEKQLIAKR 198

Query: 322 SSASPEPDLPDGKETERASDDVPVSTSASELEQEK---------ALPKAEKQESNKVDPE 381
            + S          TE    D+  + S+S  + EK           PK E     + + +
Sbjct: 199 VTRSQ----TKASTTEEVVVDLKRNLSSSNAKSEKDSVNSSVRSQKPKKEAVMKEEEEQD 258

Query: 382 NTPLSTTASKLQQEKTAI 390
           ++    T SK++++K  +
Sbjct: 259 SSEKRITRSKVEEKKNEL 261

[Close]

BLAST of Cp4.1LG05g03710 vs. TAIR10
Match: AT5G59800.1 (AT5G59800.1 methyl-CPG-binding domain 7)

HSP 1 Score: 61.6 bits (148), Expect = 2.7e-09
Identity = 46/122 (37.70%), Postives = 57/122 (46.72%), Query Frame = 1


Query: 86  LPAGWKVESRTRMSGSNVGGVYKCYIDPVTGNRFYSKPEVFRYLRTVKNKV-CTLKERKT 145
           LP GW VE   R +   +    K Y++  TG RF S   V RYLR  +N +   L+  + 
Sbjct: 116 LPRGWSVEEVPRKNSHYID---KYYVERKTGKRFRSLVSVERYLRESRNSIEQQLRVLQN 175

Query: 146 SNGKKSRTHVVIEHYKDEDLPPGWIKEIKIREKADGIRKDPFYIDPKSGYVFRSKKDVLR 205
             G          H KD  LP GWI E K R  +  I  D  YI+P +G  FRS   V R
Sbjct: 176 RRG----------HSKDFRLPDGWIVEEKPRRSSSHI--DRSYIEPGTGNKFRSMAAVER 222

Query: 206 YL 207
           YL
Sbjct: 236 YL 222

[Close]

BLAST of Cp4.1LG05g03710 vs. TAIR10
Match: AT5G59380.1 (AT5G59380.1 methyl-CPG-binding domain 6)

HSP 1 Score: 55.5 bits (132), Expect = 1.9e-07
Identity = 34/93 (36.56%), Postives = 44/93 (47.31%), Query Frame = 1


Query: 58  SPTSSRIKTQSGNSPVQLTVKANERP------EWLPAGWKVESRTRMSGSNVGGVYKCYI 117
           S  S RI   +G   V    ++  R        WLP GW+VE + R SG+  G V K Y 
Sbjct: 47  SGESVRIGMANGTDQVNHQTESKSRKRAAPGDNWLPPGWRVEDKIRTSGATAGSVDKYYY 106

Query: 118 DPVTGNRFYSKPEVFRYLRTVKNKVCTLKERKT 145
           +P TG +F S+ EV  YL    +K  T K   T
Sbjct: 107 EPNTGRKFRSRTEVLYYLEHGTSKRGTKKAENT 139

[Close]

BLAST of Cp4.1LG05g03710 vs. TAIR10
Match: AT3G46580.1 (AT3G46580.1 methyl-CPG-binding domain protein 5)

HSP 1 Score: 54.3 bits (129), Expect = 4.2e-07
Identity = 29/68 (42.65%), Postives = 36/68 (52.94%), Query Frame = 1


Query: 85  WLPAGWKVESRTRMSGSNVGGVYKCYIDPVTGNRFYSKPEVFRYLR--TVKNKVCTLKER 144
           WLP  W+ E R R SG+  G V K Y +P+TG +F SK EV  YL   T K K     E 
Sbjct: 34  WLPPDWRTEIRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHGTPKKKSVKTAEN 93

Query: 145 KTSNGKKS 151
             S+ + S
Sbjct: 94  GDSHSEHS 101

[Close]

BLAST of Cp4.1LG05g03710 vs. NCBI nr
Match: gi|449452356|ref|XP_004143925.1| (PREDICTED: methyl-CpG-binding domain-containing protein 13 isoform X2 [Cucumis sativus])

HSP 1 Score: 1035.0 bits (2675), Expect = 7.2e-299
Identity = 588/891 (65.99%), Postives = 670/891 (75.20%), Query Frame = 1


Query: 1   MVSKGSPDWLPSGWTVQFKVQKTGRKIRFYTNLESGKSFYSKDDVIGYIKSVQSQKSSPT 60
           MV+KGSPDWLPSGWTVQ+KVQKTGRKIRFYTNLE+GKSFY KDDVIGYIKS QSQKS PT
Sbjct: 1   MVAKGSPDWLPSGWTVQYKVQKTGRKIRFYTNLENGKSFYYKDDVIGYIKSTQSQKSQPT 60

Query: 61  SSRIKTQSGNSPVQLTVKANERPEWLPAGWKVESRTRMSGSNVGGVYKCYIDPVTGNRFY 120
           S  +KTQSGNSP+QLTVK+NE PEWLPAGWKVESRTRMSGSNVG VYKCYIDPVT +RFY
Sbjct: 61  SRGVKTQSGNSPLQLTVKSNEHPEWLPAGWKVESRTRMSGSNVGAVYKCYIDPVTDSRFY 120

Query: 121 SKPEVFRYLRTVKNKVCTLKERKTSNGKKSRTHVVIEHYKDEDLPPGWIKEIKIREKADG 180
           SKPEVFR+LRTVKNK+CTLKER+TSNGKKSR+ VVIEHYKDEDLPPGWIKEIKI+EKADG
Sbjct: 121 SKPEVFRHLRTVKNKLCTLKERRTSNGKKSRSRVVIEHYKDEDLPPGWIKEIKIKEKADG 180

Query: 181 IRKDPFYIDPKSGYVFRSKKDVLRYLETGEISRHAFKPKEGVDNDQESINHKIISSPSTA 240
           IRKDPFYIDPKSGYVFRSKK+V RYLETGEISRHAFKPKEG D DQE I+ K   S ST 
Sbjct: 181 IRKDPFYIDPKSGYVFRSKKEVFRYLETGEISRHAFKPKEGGDEDQELISDK--KSRSTV 240

Query: 241 KGQKPEHPTATPQPLADVVGKEMPTESSSEFPGDQILLPSGRYGNLSSELNASVSRVGTV 300
           +GQK E   ATPQ LA   G+EM T   SE PG  I     R    S+  +A V  V TV
Sbjct: 241 RGQKLEQSAATPQSLA---GEEMATGRRSERPGVHIQQLKQRQNVSSALKDALVLPVETV 300

Query: 301 TKIV---SSLVREPSEIKEKSRRSSASPEPDLPDGKETER-ASDDVPVSTSASELEQE-K 360
            +I+    ++++E +EI+EKS +  +SP+ D  +G E ER +SD+V VS  ASE +QE K
Sbjct: 301 EEIILPQEAVIKESTEIEEKSHKDLSSPKADHTEGNENERVSSDNVAVSICASESDQEIK 360

Query: 361 ALPKAEKQESNKVD----PENTPLSTTASKLQQEKTAICDVMEMGDNGEKIETERDDNGE 420
           ALPK +K ESNK++    P+N+PL  TASKL+ EK AI + ME                 
Sbjct: 361 ALPKVQKLESNKIEIVVTPDNSPLINTASKLEHEKIAISNTME----------------- 420

Query: 421 NTETEGGDNGEHTETKRVDSRKKTKTRRFKKKKDISLPRRSSKRLAGRKPESARKVEAKE 480
                 G NG           +KTKTR+ KKKKD++LPRRSSKRLAG +PE   K +AKE
Sbjct: 421 -----SGVNG-----------RKTKTRKSKKKKDVNLPRRSSKRLAGLEPELVPKEDAKE 480

Query: 481 VPQASNRNCLTKVSPDA-------------DKACQQHNVGPERVNEDHGSKFKDIPLHEN 540
           VPQ SNRN  T+VSPDA             DKA QQ +V  E+ N+DH    KD PL EN
Sbjct: 481 VPQVSNRNIFTEVSPDAGLAVKADADVHNTDKASQQLDVRSEKDNKDHTPNHKDTPLREN 540

Query: 541 ---------PSNKRKTPPECGLDVPQEKIQRIRTEKKDDVQIEAQLSVPIAEFWSDPCLE 600
                    PSNKRKTP  CG+D P+EKIQR+ TEKKDD ++EAQL+VPIA+FWSDPCLE
Sbjct: 541 HKDMSLCENPSNKRKTPLACGVDAPEEKIQRVETEKKDDGKMEAQLNVPIADFWSDPCLE 600

Query: 601 FAIKTLTGALPVENATTTDGLVSDPTIDFLQGQKSVKNGSGSCMDKRTQENTKFKNKKEF 660
           FAIKTLTGALPVENATTT+  VS+PT++FLQGQ SVKNG GS M+KRTQ N + +NKKE 
Sbjct: 601 FAIKTLTGALPVENATTTNEPVSNPTVNFLQGQSSVKNGPGSRMNKRTQGNKRIRNKKEL 660

Query: 661 TSNRQSSSTNGLKPELASNIISFQQA--NDRSNEAVLAFNLSDSGILGEP-QNEPCKTSC 720
           T++ QS S NGLKPELASNIISF QA  N  SNEAVLAFNLSD  I G+P +NE  KTSC
Sbjct: 661 TTSSQSPSINGLKPELASNIISFDQANPNHHSNEAVLAFNLSDGRIHGQPSKNEQYKTSC 720

Query: 721 QKFPPRELHHPPP-------DRINTCHESNKMALDDLNQKHQTKD-TTSETPIAFPFGDS 780
           +   P ELHH  P       + I+ CHESN M LDD +Q  QT D  TSE P++FPFGDS
Sbjct: 721 EILTPSELHHSLPQVDSERFNGISACHESNNMMLDDPHQILQTNDHMTSEVPLSFPFGDS 780

Query: 781 WADPCLDFAFKTLTGAIPIEGSLEIQSYFEERIESSRSQRESSIALPDYGSPNFFQNDIS 840
           WADPCLDFAFKTLTGAIPI+ SLEIQS+FEER+ESSRSQ++SS ALPD+GSPN FQNDIS
Sbjct: 781 WADPCLDFAFKTLTGAIPIDDSLEIQSFFEERLESSRSQKDSSPALPDFGSPNLFQNDIS 840

Query: 841 SHFDGPEKSGSVQHLSLDP--LLGNVNLPSCSGFTSQQQPRVDRNRPFKGR 848
           SHFDGPEKS S QHLSLDP   LGNV+LPSCSGFTSQQQ  VDRNR F+GR
Sbjct: 841 SHFDGPEKSVSGQHLSLDPQLSLGNVSLPSCSGFTSQQQSSVDRNRSFRGR 853

[Close]

BLAST of Cp4.1LG05g03710 vs. NCBI nr
Match: gi|778699725|ref|XP_011654766.1| (PREDICTED: methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucumis sativus])

HSP 1 Score: 1028.1 bits (2657), Expect = 8.8e-297
Identity = 588/898 (65.48%), Postives = 670/898 (74.61%), Query Frame = 1


Query: 1   MVSKGSPDWLPSGWTVQFKVQKTGRKIRFYTNLESGKSFYSKDDVIGYIKSVQSQKSSPT 60
           MV+KGSPDWLPSGWTVQ+KVQKTGRKIRFYTNLE+GKSFY KDDVIGYIKS QSQKS PT
Sbjct: 1   MVAKGSPDWLPSGWTVQYKVQKTGRKIRFYTNLENGKSFYYKDDVIGYIKSTQSQKSQPT 60

Query: 61  SSRIKTQSGNSPVQLTVKANERPEWLPAGWKVESRTRMSGSNVGGVYKCYIDPVTGNRFY 120
           S  +KTQSGNSP+QLTVK+NE PEWLPAGWKVESRTRMSGSNVG VYKCYIDPVT +RFY
Sbjct: 61  SRGVKTQSGNSPLQLTVKSNEHPEWLPAGWKVESRTRMSGSNVGAVYKCYIDPVTDSRFY 120

Query: 121 SKPEVFRYLRTVKNKVCTLKERKTSNGKKSRTHVVIEHYKDEDLPPGWIKEIKIREKADG 180
           SKPEVFR+LRTVKNK+CTLKER+TSNGKKSR+ VVIEHYKDEDLPPGWIKEIKI+EKADG
Sbjct: 121 SKPEVFRHLRTVKNKLCTLKERRTSNGKKSRSRVVIEHYKDEDLPPGWIKEIKIKEKADG 180

Query: 181 IRKDP-------FYIDPKSGYVFRSKKDVLRYLETGEISRHAFKPKEGVDNDQESINHKI 240
           IRKDP       FYIDPKSGYVFRSKK+V RYLETGEISRHAFKPKEG D DQE I+ K 
Sbjct: 181 IRKDPLCPTFLQFYIDPKSGYVFRSKKEVFRYLETGEISRHAFKPKEGGDEDQELISDK- 240

Query: 241 ISSPSTAKGQKPEHPTATPQPLADVVGKEMPTESSSEFPGDQILLPSGRYGNLSSELNAS 300
             S ST +GQK E   ATPQ LA   G+EM T   SE PG  I     R    S+  +A 
Sbjct: 241 -KSRSTVRGQKLEQSAATPQSLA---GEEMATGRRSERPGVHIQQLKQRQNVSSALKDAL 300

Query: 301 VSRVGTVTKIV---SSLVREPSEIKEKSRRSSASPEPDLPDGKETER-ASDDVPVSTSAS 360
           V  V TV +I+    ++++E +EI+EKS +  +SP+ D  +G E ER +SD+V VS  AS
Sbjct: 301 VLPVETVEEIILPQEAVIKESTEIEEKSHKDLSSPKADHTEGNENERVSSDNVAVSICAS 360

Query: 361 ELEQE-KALPKAEKQESNKVD----PENTPLSTTASKLQQEKTAICDVMEMGDNGEKIET 420
           E +QE KALPK +K ESNK++    P+N+PL  TASKL+ EK AI + ME          
Sbjct: 361 ESDQEIKALPKVQKLESNKIEIVVTPDNSPLINTASKLEHEKIAISNTME---------- 420

Query: 421 ERDDNGENTETEGGDNGEHTETKRVDSRKKTKTRRFKKKKDISLPRRSSKRLAGRKPESA 480
                        G NG           +KTKTR+ KKKKD++LPRRSSKRLAG +PE  
Sbjct: 421 ------------SGVNG-----------RKTKTRKSKKKKDVNLPRRSSKRLAGLEPELV 480

Query: 481 RKVEAKEVPQASNRNCLTKVSPDA-------------DKACQQHNVGPERVNEDHGSKFK 540
            K +AKEVPQ SNRN  T+VSPDA             DKA QQ +V  E+ N+DH    K
Sbjct: 481 PKEDAKEVPQVSNRNIFTEVSPDAGLAVKADADVHNTDKASQQLDVRSEKDNKDHTPNHK 540

Query: 541 DIPLHEN---------PSNKRKTPPECGLDVPQEKIQRIRTEKKDDVQIEAQLSVPIAEF 600
           D PL EN         PSNKRKTP  CG+D P+EKIQR+ TEKKDD ++EAQL+VPIA+F
Sbjct: 541 DTPLRENHKDMSLCENPSNKRKTPLACGVDAPEEKIQRVETEKKDDGKMEAQLNVPIADF 600

Query: 601 WSDPCLEFAIKTLTGALPVENATTTDGLVSDPTIDFLQGQKSVKNGSGSCMDKRTQENTK 660
           WSDPCLEFAIKTLTGALPVENATTT+  VS+PT++FLQGQ SVKNG GS M+KRTQ N +
Sbjct: 601 WSDPCLEFAIKTLTGALPVENATTTNEPVSNPTVNFLQGQSSVKNGPGSRMNKRTQGNKR 660

Query: 661 FKNKKEFTSNRQSSSTNGLKPELASNIISFQQA--NDRSNEAVLAFNLSDSGILGEP-QN 720
            +NKKE T++ QS S NGLKPELASNIISF QA  N  SNEAVLAFNLSD  I G+P +N
Sbjct: 661 IRNKKELTTSSQSPSINGLKPELASNIISFDQANPNHHSNEAVLAFNLSDGRIHGQPSKN 720

Query: 721 EPCKTSCQKFPPRELHHPPP-------DRINTCHESNKMALDDLNQKHQTKD-TTSETPI 780
           E  KTSC+   P ELHH  P       + I+ CHESN M LDD +Q  QT D  TSE P+
Sbjct: 721 EQYKTSCEILTPSELHHSLPQVDSERFNGISACHESNNMMLDDPHQILQTNDHMTSEVPL 780

Query: 781 AFPFGDSWADPCLDFAFKTLTGAIPIEGSLEIQSYFEERIESSRSQRESSIALPDYGSPN 840
           +FPFGDSWADPCLDFAFKTLTGAIPI+ SLEIQS+FEER+ESSRSQ++SS ALPD+GSPN
Sbjct: 781 SFPFGDSWADPCLDFAFKTLTGAIPIDDSLEIQSFFEERLESSRSQKDSSPALPDFGSPN 840

Query: 841 FFQNDISSHFDGPEKSGSVQHLSLDP--LLGNVNLPSCSGFTSQQQPRVDRNRPFKGR 848
            FQNDISSHFDGPEKS S QHLSLDP   LGNV+LPSCSGFTSQQQ  VDRNR F+GR
Sbjct: 841 LFQNDISSHFDGPEKSVSGQHLSLDPQLSLGNVSLPSCSGFTSQQQSSVDRNRSFRGR 860

[Close]

BLAST of Cp4.1LG05g03710 vs. NCBI nr
Match: gi|659073745|ref|XP_008437229.1| (PREDICTED: transcriptional regulator ATRX homolog isoform X3 [Cucumis melo])

HSP 1 Score: 690.6 bits (1781), Expect = 3.3e-195
Identity = 414/663 (62.44%), Postives = 470/663 (70.89%), Query Frame = 1


Query: 1   MVSKGSPDWLPSGWTVQFKVQKTGRKIRFYTNLESGKSFYSKDDVIGYIKSVQSQKSSPT 60
           MV+KGSPDWLPSGWTVQ+KVQKTGRKIRFYTNLE+GKSFY KDDV+GYIKS QSQKS PT
Sbjct: 1   MVAKGSPDWLPSGWTVQYKVQKTGRKIRFYTNLETGKSFYYKDDVLGYIKSTQSQKSQPT 60

Query: 61  SSRIKTQSGNSPVQLTVKANERPEWLPAGWKVESRTRMSGSNVGGVYKCYIDPVTGNRFY 120
           S  IKTQSGNSPVQ TVK+NE PEWLPAGWKVESRTRMSGSNVG VYKCYIDPVT +RFY
Sbjct: 61  SRGIKTQSGNSPVQQTVKSNEHPEWLPAGWKVESRTRMSGSNVGAVYKCYIDPVTDSRFY 120

Query: 121 SKPEVFRYLRTVKNKVCTLKERKTSNGKKSRTHVVIEHYKDEDLPPGWIKEIKIREKADG 180
           SKPEVFR+LRTVKNK+CTLKER+TSNG KSR+ VVIEHYKDEDLPPGWIKEIKI+EKADG
Sbjct: 121 SKPEVFRHLRTVKNKLCTLKERRTSNGTKSRSRVVIEHYKDEDLPPGWIKEIKIKEKADG 180

Query: 181 IRKDPFYIDPKSGYVFRSKKDVLRYLETGEISRHAFKPKEGVDNDQESINHKIISSPSTA 240
           IRKDPFYIDPKSGY+FRSKK+V RYLETGEISRHAFKPKEG D +QE I+ K   S ST 
Sbjct: 181 IRKDPFYIDPKSGYIFRSKKEVFRYLETGEISRHAFKPKEGGDEEQELISDK--KSRSTV 240

Query: 241 KGQKPEHPTATPQPLADVVGKEMPTESSSEFPGDQILLPSGRYGNLSSELNASVSRVGTV 300
           +GQK E   ATPQPLA   G+EM T   SE PG  I     R    S+  +A V  V TV
Sbjct: 241 RGQKLELSAATPQPLA---GEEMATGRRSERPGVHIQQLKQRRNVSSALKDALVLPVETV 300

Query: 301 TKIV---------SSLVREPSEIKEKSRRSSASPEPDLPDGKETER-ASDDVPVSTSASE 360
            +I+         S+ ++EP+EI+E+S R+S+SP+ D   G ETER +SD+V VST ASE
Sbjct: 301 EEIILPQEAVIKESTEIKEPTEIEERSHRNSSSPKADHTGGNETERVSSDNVAVSTCASE 360

Query: 361 LEQEKALPKAEKQESNKVD----PENTPLSTTASKLQQEKTAICDVMEMGDNGEKIETER 420
            +QEKALPK EK ESNK+D    P+N+PL  TASKL                 E+I T  
Sbjct: 361 SDQEKALPKVEKLESNKIDIVVTPDNSPLIDTASKL---------------EHERIAT-- 420

Query: 421 DDNGENTETEGGDNGEHTETKRVDSRKKTKTRRFKKKKDISLPRRSSKRLAGRKPESARK 480
                +   E  DNG           +KTKTR+ +KKKD++LPRRSSKRLAG +PE   K
Sbjct: 421 -----SNPMESDDNG-----------RKTKTRKSRKKKDVNLPRRSSKRLAGLEPELVPK 480

Query: 481 VEAKEVPQASNRNCLTKVSPDA-------------DKACQQHNVGPERVNEDHGSKFKDI 540
           V+AKEVPQASNRN  T+VSPDA             DKA QQ ++  E+ NE H    KD 
Sbjct: 481 VDAKEVPQASNRNIFTEVSPDAGLTVKADADVHNTDKASQQLDMRSEKDNEHHIPNHKDT 540

Query: 541 PLHEN------------------PSNKRKTPPECGLDVPQEKIQRIRTEKKDDVQIEAQL 600
            L EN                   SNKRKT   C LD P+EKIQR+ TEKKDD ++EAQL
Sbjct: 541 SLRENHKDTSLRENHKDTSLCENSSNKRKTLT-CCLDAPEEKIQRVETEKKDDGKMEAQL 600

Query: 601 SVPIAEFWSDPCLEFAIKTLTGALPVENATTTDGLVS----DP----TIDFLQGQKSVKN 611
            VPIA+FWSDPCLEFAIKTLTGALPVENATTT+  VS    DP    T+DFLQGQ SVK 
Sbjct: 601 DVPIADFWSDPCLEFAIKTLTGALPVENATTTNEPVSSTTVDPVSNTTVDFLQGQSSVKK 624

[Close]

BLAST of Cp4.1LG05g03710 vs. NCBI nr
Match: gi|659073741|ref|XP_008437227.1| (PREDICTED: uncharacterized protein LOC103482721 isoform X1 [Cucumis melo])

HSP 1 Score: 683.7 bits (1763), Expect = 4.0e-193
Identity = 414/670 (61.79%), Postives = 470/670 (70.15%), Query Frame = 1


Query: 1   MVSKGSPDWLPSGWTVQFKVQKTGRKIRFYTNLESGKSFYSKDDVIGYIKSVQSQKSSPT 60
           MV+KGSPDWLPSGWTVQ+KVQKTGRKIRFYTNLE+GKSFY KDDV+GYIKS QSQKS PT
Sbjct: 1   MVAKGSPDWLPSGWTVQYKVQKTGRKIRFYTNLETGKSFYYKDDVLGYIKSTQSQKSQPT 60

Query: 61  SSRIKTQSGNSPVQLTVKANERPEWLPAGWKVESRTRMSGSNVGGVYKCYIDPVTGNRFY 120
           S  IKTQSGNSPVQ TVK+NE PEWLPAGWKVESRTRMSGSNVG VYKCYIDPVT +RFY
Sbjct: 61  SRGIKTQSGNSPVQQTVKSNEHPEWLPAGWKVESRTRMSGSNVGAVYKCYIDPVTDSRFY 120

Query: 121 SKPEVFRYLRTVKNKVCTLKERKTSNGKKSRTHVVIEHYKDEDLPPGWIKEIKIREKADG 180
           SKPEVFR+LRTVKNK+CTLKER+TSNG KSR+ VVIEHYKDEDLPPGWIKEIKI+EKADG
Sbjct: 121 SKPEVFRHLRTVKNKLCTLKERRTSNGTKSRSRVVIEHYKDEDLPPGWIKEIKIKEKADG 180

Query: 181 IRKDP-------FYIDPKSGYVFRSKKDVLRYLETGEISRHAFKPKEGVDNDQESINHKI 240
           IRKDP       FYIDPKSGY+FRSKK+V RYLETGEISRHAFKPKEG D +QE I+ K 
Sbjct: 181 IRKDPLYPTFLQFYIDPKSGYIFRSKKEVFRYLETGEISRHAFKPKEGGDEEQELISDK- 240

Query: 241 ISSPSTAKGQKPEHPTATPQPLADVVGKEMPTESSSEFPGDQILLPSGRYGNLSSELNAS 300
             S ST +GQK E   ATPQPLA   G+EM T   SE PG  I     R    S+  +A 
Sbjct: 241 -KSRSTVRGQKLELSAATPQPLA---GEEMATGRRSERPGVHIQQLKQRRNVSSALKDAL 300

Query: 301 VSRVGTVTKIV---------SSLVREPSEIKEKSRRSSASPEPDLPDGKETER-ASDDVP 360
           V  V TV +I+         S+ ++EP+EI+E+S R+S+SP+ D   G ETER +SD+V 
Sbjct: 301 VLPVETVEEIILPQEAVIKESTEIKEPTEIEERSHRNSSSPKADHTGGNETERVSSDNVA 360

Query: 361 VSTSASELEQEKALPKAEKQESNKVD----PENTPLSTTASKLQQEKTAICDVMEMGDNG 420
           VST ASE +QEKALPK EK ESNK+D    P+N+PL  TASKL                 
Sbjct: 361 VSTCASESDQEKALPKVEKLESNKIDIVVTPDNSPLIDTASKL---------------EH 420

Query: 421 EKIETERDDNGENTETEGGDNGEHTETKRVDSRKKTKTRRFKKKKDISLPRRSSKRLAGR 480
           E+I T       +   E  DNG           +KTKTR+ +KKKD++LPRRSSKRLAG 
Sbjct: 421 ERIAT-------SNPMESDDNG-----------RKTKTRKSRKKKDVNLPRRSSKRLAGL 480

Query: 481 KPESARKVEAKEVPQASNRNCLTKVSPDA-------------DKACQQHNVGPERVNEDH 540
           +PE   KV+AKEVPQASNRN  T+VSPDA             DKA QQ ++  E+ NE H
Sbjct: 481 EPELVPKVDAKEVPQASNRNIFTEVSPDAGLTVKADADVHNTDKASQQLDMRSEKDNEHH 540

Query: 541 GSKFKDIPLHEN------------------PSNKRKTPPECGLDVPQEKIQRIRTEKKDD 600
               KD  L EN                   SNKRKT   C LD P+EKIQR+ TEKKDD
Sbjct: 541 IPNHKDTSLRENHKDTSLRENHKDTSLCENSSNKRKTLT-CCLDAPEEKIQRVETEKKDD 600

Query: 601 VQIEAQLSVPIAEFWSDPCLEFAIKTLTGALPVENATTTDGLVS----DP----TIDFLQ 611
            ++EAQL VPIA+FWSDPCLEFAIKTLTGALPVENATTT+  VS    DP    T+DFLQ
Sbjct: 601 GKMEAQLDVPIADFWSDPCLEFAIKTLTGALPVENATTTNEPVSSTTVDPVSNTTVDFLQ 631

[Close]

BLAST of Cp4.1LG05g03710 vs. NCBI nr
Match: gi|659073743|ref|XP_008437228.1| (PREDICTED: uncharacterized protein LOC103482721 isoform X2 [Cucumis melo])

HSP 1 Score: 679.9 bits (1753), Expect = 5.8e-192
Identity = 414/670 (61.79%), Postives = 470/670 (70.15%), Query Frame = 1


Query: 1   MVSKGSPDWLPSGWTVQFKVQKTGRKIRFYTNLESGKSFYSKDDVIGYIKSVQSQKSSPT 60
           MV+KGSPDWLPSGWTVQ+KVQKTGRKIRFYTNLE+GKSFY KDDV+GYIKS QSQKS PT
Sbjct: 1   MVAKGSPDWLPSGWTVQYKVQKTGRKIRFYTNLETGKSFYYKDDVLGYIKSTQSQKSQPT 60

Query: 61  SSRIKTQSGNSPVQLTVKANERPEWLPAGWKVESRTRMSGSNVGGVYKCYIDPVTGNRFY 120
           S  IKTQSGNSPVQ TVK+NE PEWLPAGWKVESRTRMSGSNVG VYKCYIDPVT +RFY
Sbjct: 61  SRGIKTQSGNSPVQ-TVKSNEHPEWLPAGWKVESRTRMSGSNVGAVYKCYIDPVTDSRFY 120

Query: 121 SKPEVFRYLRTVKNKVCTLKERKTSNGKKSRTHVVIEHYKDEDLPPGWIKEIKIREKADG 180
           SKPEVFR+LRTVKNK+CTLKER+TSNG KSR+ VVIEHYKDEDLPPGWIKEIKI+EKADG
Sbjct: 121 SKPEVFRHLRTVKNKLCTLKERRTSNGTKSRSRVVIEHYKDEDLPPGWIKEIKIKEKADG 180

Query: 181 IRKDP-------FYIDPKSGYVFRSKKDVLRYLETGEISRHAFKPKEGVDNDQESINHKI 240
           IRKDP       FYIDPKSGY+FRSKK+V RYLETGEISRHAFKPKEG D +QE I+ K 
Sbjct: 181 IRKDPLYPTFLQFYIDPKSGYIFRSKKEVFRYLETGEISRHAFKPKEGGDEEQELISDK- 240

Query: 241 ISSPSTAKGQKPEHPTATPQPLADVVGKEMPTESSSEFPGDQILLPSGRYGNLSSELNAS 300
             S ST +GQK E   ATPQPLA   G+EM T   SE PG  I     R    S+  +A 
Sbjct: 241 -KSRSTVRGQKLELSAATPQPLA---GEEMATGRRSERPGVHIQQLKQRRNVSSALKDAL 300

Query: 301 VSRVGTVTKIV---------SSLVREPSEIKEKSRRSSASPEPDLPDGKETER-ASDDVP 360
           V  V TV +I+         S+ ++EP+EI+E+S R+S+SP+ D   G ETER +SD+V 
Sbjct: 301 VLPVETVEEIILPQEAVIKESTEIKEPTEIEERSHRNSSSPKADHTGGNETERVSSDNVA 360

Query: 361 VSTSASELEQEKALPKAEKQESNKVD----PENTPLSTTASKLQQEKTAICDVMEMGDNG 420
           VST ASE +QEKALPK EK ESNK+D    P+N+PL  TASKL                 
Sbjct: 361 VSTCASESDQEKALPKVEKLESNKIDIVVTPDNSPLIDTASKL---------------EH 420

Query: 421 EKIETERDDNGENTETEGGDNGEHTETKRVDSRKKTKTRRFKKKKDISLPRRSSKRLAGR 480
           E+I T       +   E  DNG           +KTKTR+ +KKKD++LPRRSSKRLAG 
Sbjct: 421 ERIAT-------SNPMESDDNG-----------RKTKTRKSRKKKDVNLPRRSSKRLAGL 480

Query: 481 KPESARKVEAKEVPQASNRNCLTKVSPDA-------------DKACQQHNVGPERVNEDH 540
           +PE   KV+AKEVPQASNRN  T+VSPDA             DKA QQ ++  E+ NE H
Sbjct: 481 EPELVPKVDAKEVPQASNRNIFTEVSPDAGLTVKADADVHNTDKASQQLDMRSEKDNEHH 540

Query: 541 GSKFKDIPLHEN------------------PSNKRKTPPECGLDVPQEKIQRIRTEKKDD 600
               KD  L EN                   SNKRKT   C LD P+EKIQR+ TEKKDD
Sbjct: 541 IPNHKDTSLRENHKDTSLRENHKDTSLCENSSNKRKTLT-CCLDAPEEKIQRVETEKKDD 600

Query: 601 VQIEAQLSVPIAEFWSDPCLEFAIKTLTGALPVENATTTDGLVS----DP----TIDFLQ 611
            ++EAQL VPIA+FWSDPCLEFAIKTLTGALPVENATTT+  VS    DP    T+DFLQ
Sbjct: 601 GKMEAQLDVPIADFWSDPCLEFAIKTLTGALPVENATTTNEPVSSTTVDPVSNTTVDFLQ 630

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g03710 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MBD13_ARATH	5.6e-09	26.74	Methyl-CpG-binding domain-containing protein 13 OS=Arabidopsis thaliana GN=MBD13...	[more]
MBD7_ARATH	4.7e-08	37.70	Methyl-CpG-binding domain-containing protein 7 OS=Arabidopsis thaliana GN=MBD7 P...	[more]
MBD6_ARATH	3.4e-06	36.56	Methyl-CpG-binding domain-containing protein 6 OS=Arabidopsis thaliana GN=MBD6 P...	[more]
MBD5_ARATH	7.5e-06	42.65	Methyl-CpG-binding domain-containing protein 5 OS=Arabidopsis thaliana GN=MBD5 P...	[more]

BLAST of Cp4.1LG05g03710 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKL3_CUCSA	5.0e-299	65.99	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G154900 PE=4 SV=1	[more]
A0A067K0Z5_JATCU	7.0e-67	31.62	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20630 PE=4 SV=1	[more]
A0A0D2P1S4_GOSRA	1.2e-53	39.69	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G022700 PE=4 SV=1	[more]
V7CK04_PHAVU	1.3e-49	30.97	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G155600g PE=4 SV=1	[more]
A0A067EK95_CITSI	2.9e-49	44.79	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0013392mg PE=4 ...	[more]

BLAST of Cp4.1LG05g03710 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G63240.1	6.3e-11	33.06	unknown protein	[more]
AT5G52230.1	3.1e-10	26.74	methyl-CPG-binding domain protein 13	[more]
AT5G59800.1	2.7e-09	37.70	methyl-CPG-binding domain 7	[more]
AT5G59380.1	1.9e-07	36.56	methyl-CPG-binding domain 6	[more]
AT3G46580.1	4.2e-07	42.65	methyl-CPG-binding domain protein 5	[more]

BLAST of Cp4.1LG05g03710 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449452356\|ref\|XP_004143925.1\|	7.2e-299	65.99	PREDICTED: methyl-CpG-binding domain-containing protein 13 isoform X2 [Cucumis s...	[more]
gi\|778699725\|ref\|XP_011654766.1\|	8.8e-297	65.48	PREDICTED: methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucumis s...	[more]
gi\|659073745\|ref\|XP_008437229.1\|	3.3e-195	62.44	PREDICTED: transcriptional regulator ATRX homolog isoform X3 [Cucumis melo]	[more]
gi\|659073741\|ref\|XP_008437227.1\|	4.0e-193	61.79	PREDICTED: uncharacterized protein LOC103482721 isoform X1 [Cucumis melo]	[more]
gi\|659073743\|ref\|XP_008437228.1\|	5.8e-192	61.79	PREDICTED: uncharacterized protein LOC103482721 isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR001739	Methyl_CpG_DNA-bd

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g03710.1	Cp4.1LG05g03710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001739	Methyl-CpG DNA binding	GENE3D	G3DSA:3.30.890.10		coord: 7..54 score: 4.3E-5coord: 83..139 score: 6.5E-14coord: 157..237 score: 2.7
IPR001739	Methyl-CpG DNA binding	PFAM	PF01429	MBD	coord: 80..134 score: 1.1E-10coord: 162..210 score: 9.
IPR001739	Methyl-CpG DNA binding	PROFILE	PS50982	MBD	coord: 1..71 score: 9.742coord: 76..149 score: 13.59coord: 154..229 score: 14
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 81..135 score: 1.8E-13coord: 8..54 score: 2.84E-6coord: 158..212 score: 2.13
None	No IPR available	PANTHER	PTHR34067	FAMILY NOT NAMED	coord: 7..247 score: 1.4E-75coord: 334..588 score: 1.4
None	No IPR available	PANTHER	PTHR34067:SF1	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 13	coord: 7..247 score: 1.4E-75coord: 334..588 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG05g03710	Cucsa.302890	Cucumber (Gy14) v1	cgycpeB0792
Cp4.1LG05g03710	CmaCh16G001310	Cucurbita maxima (Rimu)	cmacpeB361
Cp4.1LG05g03710	CmaCh02G014750	Cucurbita maxima (Rimu)	cmacpeB647
Cp4.1LG05g03710	CmoCh16G001360	Cucurbita moschata (Rifu)	cmocpeB326
Cp4.1LG05g03710	CmoCh02G015110	Cucurbita moschata (Rifu)	cmocpeB596
Cp4.1LG05g03710	Cla006190	Watermelon (97103) v1	cpewmB703
Cp4.1LG05g03710	Cla011473	Watermelon (97103) v1	cpewmB717
Cp4.1LG05g03710	Csa3G181990	Cucumber (Chinese Long) v2	cpecuB719
Cp4.1LG05g03710	Csa5G154900	Cucumber (Chinese Long) v2	cpecuB736
Cp4.1LG05g03710	MELO3C005647	Melon (DHL92) v3.5.1	cpemeB647
Cp4.1LG05g03710	MELO3C006898	Melon (DHL92) v3.5.1	cpemeB697
Cp4.1LG05g03710	ClCG01G002970	Watermelon (Charleston Gray)	cpewcgB639
Cp4.1LG05g03710	ClCG05G007960	Watermelon (Charleston Gray)	cpewcgB676
Cp4.1LG05g03710	CSPI05G05700	Wild cucumber (PI 183967)	cpecpiB738
Cp4.1LG05g03710	CSPI03G16830	Wild cucumber (PI 183967)	cpecpiB721
Cp4.1LG05g03710	Lsi09G002880	Bottle gourd (USVL1VR-Ls)	cpelsiB582
Cp4.1LG05g03710	Lsi05G012390	Bottle gourd (USVL1VR-Ls)	cpelsiB624
Cp4.1LG05g03710	MELO3C005647.2	Melon (DHL92) v3.6.1	cpemedB774
Cp4.1LG05g03710	CsaV3_5G003080	Cucumber (Chinese Long) v3	cpecucB0915
Cp4.1LG05g03710	CsaV3_3G017000	Cucumber (Chinese Long) v3	cpecucB0896
Cp4.1LG05g03710	Bhi01G000972	Wax gourd	cpewgoB0929
Cp4.1LG05g03710	Bhi12G000218	Wax gourd	cpewgoB0910
Cp4.1LG05g03710	CsGy5G002990	Cucumber (Gy14) v2	cgybcpeB691
Cp4.1LG05g03710	CsGy3G016920	Cucumber (Gy14) v2	cgybcpeB427
Cp4.1LG05g03710	Carg02512	Silver-seed gourd	carcpeB1282

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG05g03710	Cp4.1LG09g00820	Cucurbita pepo (Zucchini)	cpecpeB058

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG05g03710	Melon (DHL92) v3.6.1	cpemedB831
Cp4.1LG05g03710	Silver-seed gourd	carcpeB1298
Cp4.1LG05g03710	Cucurbita pepo (Zucchini)	cpecpeB012
Cp4.1LG05g03710	Cucurbita pepo (Zucchini)	cpecpeB226
Cp4.1LG05g03710	Cucurbita maxima (Rimu)	cmacpeB329
Cp4.1LG05g03710	Cucurbita moschata (Rifu)	cmocpeB292