Cp4.1LG05g01370 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCACCATTCTGTTACCTAATCCTATGGAGGCAGCAAGGGTTATGAGCGGAGACAAATGGATGAAGGCGAAGCAAGATATAGCCTTTGTGTTGCCTATTCAAGTCCTGCAGCGTGCCCCGGTGCCACCGTCCGGTCGCAACCCGTGCAGCACCATTCCTGGGCAAAGCAATGGCCGATGCACCCTCCAGACGATGAATGTCGCAGGTGGCCCTGCCCGCTTCGTCCAGGCGCCGCCTGCTATTCACGACCCGGCTCCCATTGCCTCAGCTGCTCAAAGTTCTTGA ATGTTCACCATTCTGTTACCTAATCCTATGGAGGCAGCAAGGGTTATGAGCGGAGACAAATGGATGAAGGCGAAGCAAGATATAGCCTTTGTGTTGCCTATTCAAGTCCTGCAGCGTGCCCCGGTGCCACCGTCCGGTCGCAACCCGTGCAGCACCATTCCTGGGCAAAGCAATGGCCGATGCACCCTCCAGACGATGAATGTCGCAGGTGGCCCTGCCCGCTTCGTCCAGGCGCCGCCTGCTATTCACGACCCGGCTCCCATTGCCTCAGCTGCTCAAAGTTCTTGA ATGTTCACCATTCTGTTACCTAATCCTATGGAGGCAGCAAGGGTTATGAGCGGAGACAAATGGATGAAGGCGAAGCAAGATATAGCCTTTGTGTTGCCTATTCAAGTCCTGCAGCGTGCCCCGGTGCCACCGTCCGGTCGCAACCCGTGCAGCACCATTCCTGGGCAAAGCAATGGCCGATGCACCCTCCAGACGATGAATGTCGCAGGTGGCCCTGCCCGCTTCGTCCAGGCGCCGCCTGCTATTCACGACCCGGCTCCCATTGCCTCAGCTGCTCAAAGTTCTTGA MFTILLPNPMEAARVMSGDKWMKAKQDIAFVLPIQVLQRAPVPPSGRNPCSTIPGQSNGRCTLQTMNVAGGPARFVQAPPAIHDPAPIASAAQSS
BLAST of Cp4.1LG05g01370 vs. TrEMBL
Match: A0A0A0LCX8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G391390 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 4.3e-18 Identity = 61/91 (67.03%), Postives = 67/91 (73.63%), Query Frame = 1
BLAST of Cp4.1LG05g01370 vs. TrEMBL
Match: A0A061F0W9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_026263 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 4.8e-09 Identity = 32/49 (65.31%), Postives = 35/49 (71.43%), Query Frame = 1
BLAST of Cp4.1LG05g01370 vs. TrEMBL
Match: A0A0D2PI32_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G248500 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 9.1e-08 Identity = 34/56 (60.71%), Postives = 39/56 (69.64%), Query Frame = 1
BLAST of Cp4.1LG05g01370 vs. TrEMBL
Match: B9I5L3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s04080g PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 5.9e-07 Identity = 37/84 (44.05%), Postives = 48/84 (57.14%), Query Frame = 1
BLAST of Cp4.1LG05g01370 vs. TrEMBL
Match: I1JRQ4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G248900 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.3e-06 Identity = 36/92 (39.13%), Postives = 46/92 (50.00%), Query Frame = 1
BLAST of Cp4.1LG05g01370 vs. NCBI nr
Match: gi|659123868|ref|XP_008461883.1| (PREDICTED: uncharacterized protein LOC103500372 [Cucumis melo]) HSP 1 Score: 102.8 bits (255), Expect = 3.3e-19 Identity = 62/91 (68.13%), Postives = 69/91 (75.82%), Query Frame = 1
BLAST of Cp4.1LG05g01370 vs. NCBI nr
Match: gi|700202788|gb|KGN57921.1| (hypothetical protein Csa_3G391390 [Cucumis sativus]) HSP 1 Score: 98.6 bits (244), Expect = 6.2e-18 Identity = 61/91 (67.03%), Postives = 67/91 (73.63%), Query Frame = 1
BLAST of Cp4.1LG05g01370 vs. NCBI nr
Match: gi|590642366|ref|XP_007030498.1| (Uncharacterized protein TCM_026263 [Theobroma cacao]) HSP 1 Score: 68.6 bits (166), Expect = 6.9e-09 Identity = 32/49 (65.31%), Postives = 35/49 (71.43%), Query Frame = 1
BLAST of Cp4.1LG05g01370 vs. NCBI nr
Match: gi|763759247|gb|KJB26578.1| (hypothetical protein B456_004G248500 [Gossypium raimondii]) HSP 1 Score: 64.3 bits (155), Expect = 1.3e-07 Identity = 34/56 (60.71%), Postives = 39/56 (69.64%), Query Frame = 1
BLAST of Cp4.1LG05g01370 vs. NCBI nr
Match: gi|224123488|ref|XP_002319090.1| (hypothetical protein POPTR_0013s04080g [Populus trichocarpa]) HSP 1 Score: 61.6 bits (148), Expect = 8.5e-07 Identity = 37/84 (44.05%), Postives = 48/84 (57.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |