Cp4.1LG05g01250 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG05g01250
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionG1-like protein
LocationCp4.1LG05 : 327268 .. 327819 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCCATCACTGAATTTGAAGGCCTCAACGCCCAACAATTTGGAGGCTCCAGTGTTCCAAATTTAGGTGGTGGGTCGTCGTCCTCTTCTTCTTCTTCTTCTTCTTCTTCAAACAGCCGCTATGAGAATCAAAAACGGCGAGATTGGAACACATTTTGCCAATACCTGAAAAATCACCGACCCCCACTTGCCCTTTCAAGGTGTAGTGGAGCTCATGTTCTTGAATTCCTTCGGTATTTGGACCAATTTGGTAAGACCAAAGTCCACACTCCGATCTGCCCTTTCTACGGCCATCCCAACCCTCCAGCCCCATGTCCCTGCCCTCTACGCCAAGCATGGGGCAGCCTGGATGCTCTTATTGGCCGCCTTCGTGCAGCCTTTGAAGAGAACGGTGGGATGCCCGAAGCTAACCCTTTTGGTGCCCGTGCTATTAGGCTTTATCTTCGAGAGGTTCGTGATGTGCAGTCTAAAGCAAGAGGAATTAGCTATGAGAAGAAGAAACGAAAGCGCCCTCAACAACAAATCCTTCCACCTCCCACGGGAGCTTAA

mRNA sequence

ATGGATTCCATCACTGAATTTGAAGGCCTCAACGCCCAACAATTTGGAGGCTCCAGTGTTCCAAATTTAGGTGGTGGGTCGTCGTCCTCTTCTTCTTCTTCTTCTTCTTCTTCAAACAGCCGCTATGAGAATCAAAAACGGCGAGATTGGAACACATTTTGCCAATACCTGAAAAATCACCGACCCCCACTTGCCCTTTCAAGGTGTAGTGGAGCTCATGTTCTTGAATTCCTTCGGTATTTGGACCAATTTGGTAAGACCAAAGTCCACACTCCGATCTGCCCTTTCTACGGCCATCCCAACCCTCCAGCCCCATGTCCCTGCCCTCTACGCCAAGCATGGGGCAGCCTGGATGCTCTTATTGGCCGCCTTCGTGCAGCCTTTGAAGAGAACGGTGGGATGCCCGAAGCTAACCCTTTTGGTGCCCGTGCTATTAGGCTTTATCTTCGAGAGGTTCGTGATGTGCAGTCTAAAGCAAGAGGAATTAGCTATGAGAAGAAGAAACGAAAGCGCCCTCAACAACAAATCCTTCCACCTCCCACGGGAGCTTAA

Coding sequence (CDS)

ATGGATTCCATCACTGAATTTGAAGGCCTCAACGCCCAACAATTTGGAGGCTCCAGTGTTCCAAATTTAGGTGGTGGGTCGTCGTCCTCTTCTTCTTCTTCTTCTTCTTCTTCAAACAGCCGCTATGAGAATCAAAAACGGCGAGATTGGAACACATTTTGCCAATACCTGAAAAATCACCGACCCCCACTTGCCCTTTCAAGGTGTAGTGGAGCTCATGTTCTTGAATTCCTTCGGTATTTGGACCAATTTGGTAAGACCAAAGTCCACACTCCGATCTGCCCTTTCTACGGCCATCCCAACCCTCCAGCCCCATGTCCCTGCCCTCTACGCCAAGCATGGGGCAGCCTGGATGCTCTTATTGGCCGCCTTCGTGCAGCCTTTGAAGAGAACGGTGGGATGCCCGAAGCTAACCCTTTTGGTGCCCGTGCTATTAGGCTTTATCTTCGAGAGGTTCGTGATGTGCAGTCTAAAGCAAGAGGAATTAGCTATGAGAAGAAGAAACGAAAGCGCCCTCAACAACAAATCCTTCCACCTCCCACGGGAGCTTAA

Protein sequence

MDSITEFEGLNAQQFGGSSVPNLGGGSSSSSSSSSSSSNSRYENQKRRDWNTFCQYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAIRLYLREVRDVQSKARGISYEKKKRKRPQQQILPPPTGA
BLAST of Cp4.1LG05g01250 vs. Swiss-Prot
Match: LSH3_ARATH (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 OS=Arabidopsis thaliana GN=LSH3 PE=1 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.1e-71
Identity = 136/166 (81.93%), Postives = 146/166 (87.95%), Query Frame = 1

Query: 10  LNAQQFGGSSVPNLGGGSSS---SSSSSSSSSNSRYENQKRRDWNTFCQYLKNHRPPLAL 69
           LN      SSV    GG ++   SSSSS S+++SRYENQKRRDWNTF QYL+NHRPPL+L
Sbjct: 20  LNIISNNSSSVTGATGGEATQPLSSSSSPSANSSRYENQKRRDWNTFGQYLRNHRPPLSL 79

Query: 70  SRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRA 129
           SRCSGAHVLEFLRYLDQFGKTKVHT IC FYGHPNPPAPCPCPLRQAWGSLDALIGRLRA
Sbjct: 80  SRCSGAHVLEFLRYLDQFGKTKVHTNICHFYGHPNPPAPCPCPLRQAWGSLDALIGRLRA 139

Query: 130 AFEENGGMPEANPFGARAIRLYLREVRDVQSKARGISYEKKKRKRP 173
           AFEENGG PE NPFGARA+RLYLREVRD+QSKARG+SYEKKKRKRP
Sbjct: 140 AFEENGGKPETNPFGARAVRLYLREVRDMQSKARGVSYEKKKRKRP 185

BLAST of Cp4.1LG05g01250 vs. Swiss-Prot
Match: G1L6_ORYSJ (Protein G1-like6 OS=Oryza sativa subsp. japonica GN=G1L6 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 9.4e-71
Identity = 133/185 (71.89%), Postives = 149/185 (80.54%), Query Frame = 1

Query: 7   FEGLNAQQFGGSSVPNLGGGSSSSSSSSSSSSNSRYENQKRRDWNTFCQYLKNHRPPLAL 66
           F G  +   G  +  + GGG    S SSSS S SRYE+QKRRDWNTF QYL+NHRPPL+L
Sbjct: 48  FSGAGSSSSGAGT--SAGGGGGGPSPSSSSPSLSRYESQKRRDWNTFGQYLRNHRPPLSL 107

Query: 67  SRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRA 126
           SRCSGAHVLEFL+Y+DQFGKTKVHTP+CPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRA
Sbjct: 108 SRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRA 167

Query: 127 AFEENGGMPEANPFGARAIRLYLREVRDVQSKARGISYEKKKRKR---------PQQQIL 183
           A+EENGG PE NPFGARA+RLYLREVR+ Q++ARGISYEKKKRK+         P  +  
Sbjct: 168 AYEENGGTPEMNPFGARAVRLYLREVRETQARARGISYEKKKRKKPSSAGAGAGPSSEGS 227

BLAST of Cp4.1LG05g01250 vs. Swiss-Prot
Match: G1L6_ORYSI (Protein G1-like6 OS=Oryza sativa subsp. indica GN=OsI_09389 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 9.4e-71
Identity = 133/185 (71.89%), Postives = 149/185 (80.54%), Query Frame = 1

Query: 7   FEGLNAQQFGGSSVPNLGGGSSSSSSSSSSSSNSRYENQKRRDWNTFCQYLKNHRPPLAL 66
           F G  +   G  +  + GGG    S SSSS S SRYE+QKRRDWNTF QYL+NHRPPL+L
Sbjct: 48  FSGAGSSSSGAGT--SAGGGGGGPSPSSSSPSLSRYESQKRRDWNTFGQYLRNHRPPLSL 107

Query: 67  SRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRA 126
           SRCSGAHVLEFL+Y+DQFGKTKVHTP+CPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRA
Sbjct: 108 SRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRA 167

Query: 127 AFEENGGMPEANPFGARAIRLYLREVRDVQSKARGISYEKKKRKR---------PQQQIL 183
           A+EENGG PE NPFGARA+RLYLREVR+ Q++ARGISYEKKKRK+         P  +  
Sbjct: 168 AYEENGGTPEMNPFGARAVRLYLREVRETQARARGISYEKKKRKKPSSAGAGAGPSSEGS 227

BLAST of Cp4.1LG05g01250 vs. Swiss-Prot
Match: LSH4_ARATH (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana GN=LSH4 PE=1 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.1e-70
Identity = 133/156 (85.26%), Postives = 140/156 (89.74%), Query Frame = 1

Query: 27  SSSSSSSSSSSSN--SRYENQKRRDWNTFCQYLKNHRPPLALSRCSGAHVLEFLRYLDQF 86
           SSSSSSS  S +N  SRYENQKRRDWNTF QYL+NHRPPL+LSRCSGAHVLEFLRYLDQF
Sbjct: 32  SSSSSSSGGSGTNQLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQF 91

Query: 87  GKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARA 146
           GKTKVHT +CPF+GHPNPPAPC CPLRQAWGSLDALIGRLRAAFEENGG PE NPFGARA
Sbjct: 92  GKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNPFGARA 151

Query: 147 IRLYLREVRDVQSKARGISYEKKKRKRPQQQILPPP 181
           +RLYLREVRD Q+KARGISYEKKKRKRP     PPP
Sbjct: 152 VRLYLREVRDSQAKARGISYEKKKRKRP-----PPP 182

BLAST of Cp4.1LG05g01250 vs. Swiss-Prot
Match: G1L4_ORYSI (Protein G1-like4 OS=Oryza sativa subsp. indica GN=OsI_16643 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 6.7e-69
Identity = 133/185 (71.89%), Postives = 148/185 (80.00%), Query Frame = 1

Query: 22  NLGGGSSSSSSSSSS------SSNSRYENQKRRDWNTFCQYLKNHRPPLALSRCSGAHVL 81
           N GGG SSSS+SS S       S SRYE QKRRDWNTF QYL+NHRPPL+L++CSGAHVL
Sbjct: 16  NGGGGGSSSSNSSPSMGAGAPQSPSRYEAQKRRDWNTFGQYLRNHRPPLSLAQCSGAHVL 75

Query: 82  EFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMP 141
           EFLRYLDQFGKTKVHT  CPF+GHP+PPAPCPCPLRQAWGSLDAL+GRLRAAFEENGG P
Sbjct: 76  EFLRYLDQFGKTKVHTAACPFFGHPSPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGRP 135

Query: 142 EANPFGARAIRLYLREVRDVQSKARGISYEKKKRKRPQQQIL-----------------P 184
           E+NPF ARA+RLYLREVR+ Q++ARG+SYEKKKRK+PQQQ L                 P
Sbjct: 136 ESNPFAARAVRLYLREVREHQARARGVSYEKKKRKKPQQQQLQGGDSSGLHGHQHHPPPP 195

BLAST of Cp4.1LG05g01250 vs. TrEMBL
Match: A0A0A0LB62_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G383780 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 7.7e-80
Identity = 160/183 (87.43%), Postives = 166/183 (90.71%), Query Frame = 1

Query: 1   MDSI-TEFEGLNA---QQFG----GSSVPNLGGGSSSSSSSSSSSSNSRYENQKRRDWNT 60
           MDSI +EFE LN    Q FG     +++ NL  GSSSSSSSSSSSS  RYENQKRRDWNT
Sbjct: 1   MDSILSEFESLNNNNNQPFGVVVTNNTLQNLVVGSSSSSSSSSSSS--RYENQKRRDWNT 60

Query: 61  FCQYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQ 120
           FCQYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQ
Sbjct: 61  FCQYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQ 120

Query: 121 AWGSLDALIGRLRAAFEENGGMPEANPFGARAIRLYLREVRDVQSKARGISYEKKKRKRP 176
           AWGSLDALIGRLRAAFEENGGMPEANPFGARA+RLYLREVRD+QSKARGISYEKKKRKRP
Sbjct: 121 AWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRP 180

BLAST of Cp4.1LG05g01250 vs. TrEMBL
Match: A0A061DNN8_THECC (IQ motif and SEC7 domain-containing protein 2 OS=Theobroma cacao GN=TCM_004015 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 3.6e-77
Identity = 153/187 (81.82%), Postives = 163/187 (87.17%), Query Frame = 1

Query: 1   MDSITEFEGLNAQQFGGSSVPNLGGGS-SSSSSSSSSSSNSRYENQKRRDWNTFCQYLKN 60
           MDSI E +  N++     +V N G  S +SSSS SSSS++SRYENQKRRDWNTF QYLKN
Sbjct: 1   MDSIREMDSSNSEN-ASLNVSNNGTASLASSSSPSSSSTSSRYENQKRRDWNTFGQYLKN 60

Query: 61  HRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDA 120
           HRPPL+LSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDA
Sbjct: 61  HRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDA 120

Query: 121 LIGRLRAAFEENGGMPEANPFGARAIRLYLREVRDVQSKARGISYEKKKRKRPQQQ---I 180
           LIGRLRAAFEENGG PEANPFGARA+RLYLREVRD+QSKARGISYEKKKRKRP  Q    
Sbjct: 121 LIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPAQQIPT 180

Query: 181 LPPPTGA 184
           LPPP GA
Sbjct: 181 LPPPPGA 186

BLAST of Cp4.1LG05g01250 vs. TrEMBL
Match: B9GS06_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s03860g PE=4 SV=2)

HSP 1 Score: 292.0 bits (746), Expect = 5.2e-76
Identity = 152/194 (78.35%), Postives = 163/194 (84.02%), Query Frame = 1

Query: 1   MDSITEFEGLNAQQFGGSSVPNLGGGSSSSSSSSSSSSN--SRYENQKRRDWNTFCQYLK 60
           M+SI E E  N++    +++ N     S S+SSS SSS   SRYENQKRRDWNTF QYLK
Sbjct: 1   MNSIPEMENSNSENISFNNIGNSPTAMSVSNSSSPSSSTAPSRYENQKRRDWNTFGQYLK 60

Query: 61  NHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLD 120
           NHRPPL+LSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLD
Sbjct: 61  NHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLD 120

Query: 121 ALIGRLRAAFEENGGMPEANPFGARAIRLYLREVRDVQSKARGISYEKKKRKR-PQQQI- 180
           ALIGRLRAAFEENGG PEANPFGARA+RLYLREVRD+QSKARG+SYEKKKRKR PQQQI 
Sbjct: 121 ALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGVSYEKKKRKRPPQQQIQ 180

Query: 181 -------LPPPTGA 184
                  LPPP GA
Sbjct: 181 SLPLPLPLPPPPGA 194

BLAST of Cp4.1LG05g01250 vs. TrEMBL
Match: F6HZL1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g03530 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 5.2e-76
Identity = 147/185 (79.46%), Postives = 162/185 (87.57%), Query Frame = 1

Query: 1   MDSITEFEGLNAQQFGGSSVPNLGGGSSSSSSSSSSSSNSRYENQKRRDWNTFCQYLKNH 60
           MDSI E +  N++    +S+      S+++SSSS+S++ SRYENQKRRDWNTF QYLKNH
Sbjct: 1   MDSIPEMDSSNSEN---TSINTSSNSSAATSSSSASTTPSRYENQKRRDWNTFGQYLKNH 60

Query: 61  RPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDAL 120
           RPPL+LSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDAL
Sbjct: 61  RPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDAL 120

Query: 121 IGRLRAAFEENGGMPEANPFGARAIRLYLREVRDVQSKARGISYEKKKRKRPQQQILP-- 180
           IGRLRAAFEENGG PEANPFGARA+RLYLREVRD+QSKARGISYEKKKRKR  QQ+ P  
Sbjct: 121 IGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRLPQQMPPQL 180

Query: 181 PPTGA 184
           PP GA
Sbjct: 181 PPPGA 182

BLAST of Cp4.1LG05g01250 vs. TrEMBL
Match: A0A0D2QFS1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G178100 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 5.2e-76
Identity = 150/190 (78.95%), Postives = 159/190 (83.68%), Query Frame = 1

Query: 1   MDSITEFEGLNAQQFGGSSVPNLGGGSSSSSSSSSSSSNSRYENQKRRDWNTFCQYLKNH 60
           MDSI E +  N++     +V N GG S  SSSSS +SS  RYENQKRRDWNTF QYLKNH
Sbjct: 1   MDSIRETDSSNSENVSLINVSNNGGTSLPSSSSSPTSS--RYENQKRRDWNTFGQYLKNH 60

Query: 61  RPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDAL 120
           RPPL+LSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPP PCPCPLRQAWGSLDAL
Sbjct: 61  RPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPVPCPCPLRQAWGSLDAL 120

Query: 121 IGRLRAAFEENGGMPEANPFGARAIRLYLREVRDVQSKARGISYEKKKRKRPQQQIL--- 180
           IGRLRAAFEENGG PE NPFGARA+RLYLREVRD+QSKARGISYEKKKRKRP  Q +   
Sbjct: 121 IGRLRAAFEENGGKPEVNPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPAQQIPTL 180

Query: 181 ----PPPTGA 184
               PPPTGA
Sbjct: 181 PLPPPPPTGA 188

BLAST of Cp4.1LG05g01250 vs. TAIR10
Match: AT2G31160.1 (AT2G31160.1 Protein of unknown function (DUF640))

HSP 1 Score: 270.8 bits (691), Expect = 6.2e-73
Identity = 136/166 (81.93%), Postives = 146/166 (87.95%), Query Frame = 1

Query: 10  LNAQQFGGSSVPNLGGGSSS---SSSSSSSSSNSRYENQKRRDWNTFCQYLKNHRPPLAL 69
           LN      SSV    GG ++   SSSSS S+++SRYENQKRRDWNTF QYL+NHRPPL+L
Sbjct: 20  LNIISNNSSSVTGATGGEATQPLSSSSSPSANSSRYENQKRRDWNTFGQYLRNHRPPLSL 79

Query: 70  SRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRA 129
           SRCSGAHVLEFLRYLDQFGKTKVHT IC FYGHPNPPAPCPCPLRQAWGSLDALIGRLRA
Sbjct: 80  SRCSGAHVLEFLRYLDQFGKTKVHTNICHFYGHPNPPAPCPCPLRQAWGSLDALIGRLRA 139

Query: 130 AFEENGGMPEANPFGARAIRLYLREVRDVQSKARGISYEKKKRKRP 173
           AFEENGG PE NPFGARA+RLYLREVRD+QSKARG+SYEKKKRKRP
Sbjct: 140 AFEENGGKPETNPFGARAVRLYLREVRDMQSKARGVSYEKKKRKRP 185

BLAST of Cp4.1LG05g01250 vs. TAIR10
Match: AT3G23290.2 (AT3G23290.2 Protein of unknown function (DUF640))

HSP 1 Score: 266.5 bits (680), Expect = 1.2e-71
Identity = 133/156 (85.26%), Postives = 140/156 (89.74%), Query Frame = 1

Query: 27  SSSSSSSSSSSSN--SRYENQKRRDWNTFCQYLKNHRPPLALSRCSGAHVLEFLRYLDQF 86
           SSSSSSS  S +N  SRYENQKRRDWNTF QYL+NHRPPL+LSRCSGAHVLEFLRYLDQF
Sbjct: 32  SSSSSSSGGSGTNQLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQF 91

Query: 87  GKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARA 146
           GKTKVHT +CPF+GHPNPPAPC CPLRQAWGSLDALIGRLRAAFEENGG PE NPFGARA
Sbjct: 92  GKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNPFGARA 151

Query: 147 IRLYLREVRDVQSKARGISYEKKKRKRPQQQILPPP 181
           +RLYLREVRD Q+KARGISYEKKKRKRP     PPP
Sbjct: 152 VRLYLREVRDSQAKARGISYEKKKRKRP-----PPP 182

BLAST of Cp4.1LG05g01250 vs. TAIR10
Match: AT5G28490.1 (AT5G28490.1 Protein of unknown function (DUF640))

HSP 1 Score: 244.6 bits (623), Expect = 4.8e-65
Identity = 117/153 (76.47%), Postives = 134/153 (87.58%), Query Frame = 1

Query: 29  SSSSSSSSSSNSRYENQKRRDWNTFCQYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTK 88
           +SS+  +  S+SRYENQKRRDWNTFCQYL+NHRPPL+L  CSGAHVLEFLRYLDQFGKTK
Sbjct: 13  NSSTQLTPPSSSRYENQKRRDWNTFCQYLRNHRPPLSLPSCSGAHVLEFLRYLDQFGKTK 72

Query: 89  VHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAIRLY 148
           VH   C F+G PNPPAPCPCPLRQAWGSLDALIGRLRAA+EENGG PEANPFG+RA+RL+
Sbjct: 73  VHHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGPPEANPFGSRAVRLF 132

Query: 149 LREVRDVQSKARGISYEKKKRK--RPQQQILPP 180
           LREVRD Q+KARG+SYEKK+++  R + Q  PP
Sbjct: 133 LREVRDFQAKARGVSYEKKRKRVNRQKPQTQPP 165

BLAST of Cp4.1LG05g01250 vs. TAIR10
Match: AT3G04510.1 (AT3G04510.1 Protein of unknown function (DUF640))

HSP 1 Score: 238.4 bits (607), Expect = 3.4e-63
Identity = 112/156 (71.79%), Postives = 134/156 (85.90%), Query Frame = 1

Query: 21  PNLGGGSSSSSSSSSSSSNSRYENQKRRDWNTFCQYLKNHRPPLALSRCSGAHVLEFLRY 80
           PN    + + SS SS  S+SRYENQKRRDWNTFCQYL+NH PPL+L+ CSGAHVL+FLRY
Sbjct: 13  PNTSLSTQTPSSFSSPPSSSRYENQKRRDWNTFCQYLRNHHPPLSLASCSGAHVLDFLRY 72

Query: 81  LDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPF 140
           LDQFGKTKVH   C F+G PNPPAPCPCPLRQAWGSLDALIGRLRAA+EENGG PE +PF
Sbjct: 73  LDQFGKTKVHHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGAPETSPF 132

Query: 141 GARAIRLYLREVRDVQSKARGISYEKKKRKRPQQQI 177
           G+R++R++LREVRD Q+K+RG+SYEKK+++   +QI
Sbjct: 133 GSRSVRIFLREVRDFQAKSRGVSYEKKRKRVNNKQI 168

BLAST of Cp4.1LG05g01250 vs. TAIR10
Match: AT1G07090.1 (AT1G07090.1 Protein of unknown function (DUF640))

HSP 1 Score: 237.3 bits (604), Expect = 7.6e-63
Identity = 114/156 (73.08%), Postives = 131/156 (83.97%), Query Frame = 1

Query: 17  GSSVPNLGGGSSSSSSSSSSSSNSRYENQKRRDWNTFCQYLKNHRPPLALSRCSGAHVLE 76
           G S P  G     S  SS  ++ SRYE+QKRRDWNTF QYLKNH+PPLALSRCSGAHV+E
Sbjct: 7   GRSDPVKGDDPGPSFVSSPPATPSRYESQKRRDWNTFLQYLKNHKPPLALSRCSGAHVIE 66

Query: 77  FLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPE 136
           FL+YLDQFGKTKVH   CP++GH  PP+PC CPL+QAWGSLDALIGRLRAA+EENGG P+
Sbjct: 67  FLKYLDQFGKTKVHVAACPYFGHQQPPSPCSCPLKQAWGSLDALIGRLRAAYEENGGRPD 126

Query: 137 ANPFGARAIRLYLREVRDVQSKARGISYEKKKRKRP 173
           +NPF ARA+R+YLREVR+ Q+KARGI YEKKKRKRP
Sbjct: 127 SNPFAARAVRIYLREVRESQAKARGIPYEKKKRKRP 162

BLAST of Cp4.1LG05g01250 vs. NCBI nr
Match: gi|700202769|gb|KGN57902.1| (hypothetical protein Csa_3G383780 [Cucumis sativus])

HSP 1 Score: 304.7 bits (779), Expect = 1.1e-79
Identity = 160/183 (87.43%), Postives = 166/183 (90.71%), Query Frame = 1

Query: 1   MDSI-TEFEGLNA---QQFG----GSSVPNLGGGSSSSSSSSSSSSNSRYENQKRRDWNT 60
           MDSI +EFE LN    Q FG     +++ NL  GSSSSSSSSSSSS  RYENQKRRDWNT
Sbjct: 1   MDSILSEFESLNNNNNQPFGVVVTNNTLQNLVVGSSSSSSSSSSSS--RYENQKRRDWNT 60

Query: 61  FCQYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQ 120
           FCQYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQ
Sbjct: 61  FCQYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQ 120

Query: 121 AWGSLDALIGRLRAAFEENGGMPEANPFGARAIRLYLREVRDVQSKARGISYEKKKRKRP 176
           AWGSLDALIGRLRAAFEENGGMPEANPFGARA+RLYLREVRD+QSKARGISYEKKKRKRP
Sbjct: 121 AWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRP 180

BLAST of Cp4.1LG05g01250 vs. NCBI nr
Match: gi|778681005|ref|XP_011651439.1| (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 304.7 bits (779), Expect = 1.1e-79
Identity = 160/183 (87.43%), Postives = 166/183 (90.71%), Query Frame = 1

Query: 1   MDSI-TEFEGLNA---QQFG----GSSVPNLGGGSSSSSSSSSSSSNSRYENQKRRDWNT 60
           MDSI +EFE LN    Q FG     +++ NL  GSSSSSSSSSSSS  RYENQKRRDWNT
Sbjct: 1   MDSILSEFESLNNNNNQPFGVVVTNNTLQNLVVGSSSSSSSSSSSS--RYENQKRRDWNT 60

Query: 61  FCQYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQ 120
           FCQYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQ
Sbjct: 61  FCQYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQ 120

Query: 121 AWGSLDALIGRLRAAFEENGGMPEANPFGARAIRLYLREVRDVQSKARGISYEKKKRKRP 176
           AWGSLDALIGRLRAAFEENGGMPEANPFGARA+RLYLREVRD+QSKARGISYEKKKRKRP
Sbjct: 121 AWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRP 180

BLAST of Cp4.1LG05g01250 vs. NCBI nr
Match: gi|778681002|ref|XP_004152052.2| (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 isoform X1 [Cucumis sativus])

HSP 1 Score: 304.7 bits (779), Expect = 1.1e-79
Identity = 160/183 (87.43%), Postives = 166/183 (90.71%), Query Frame = 1

Query: 1   MDSI-TEFEGLNA---QQFG----GSSVPNLGGGSSSSSSSSSSSSNSRYENQKRRDWNT 60
           MDSI +EFE LN    Q FG     +++ NL  GSSSSSSSSSSSS  RYENQKRRDWNT
Sbjct: 1   MDSILSEFESLNNNNNQPFGVVVTNNTLQNLVVGSSSSSSSSSSSS--RYENQKRRDWNT 60

Query: 61  FCQYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQ 120
           FCQYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQ
Sbjct: 61  FCQYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQ 120

Query: 121 AWGSLDALIGRLRAAFEENGGMPEANPFGARAIRLYLREVRDVQSKARGISYEKKKRKRP 176
           AWGSLDALIGRLRAAFEENGGMPEANPFGARA+RLYLREVRD+QSKARGISYEKKKRKRP
Sbjct: 121 AWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRP 180

BLAST of Cp4.1LG05g01250 vs. NCBI nr
Match: gi|659093194|ref|XP_008447416.1| (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Cucumis melo])

HSP 1 Score: 303.1 bits (775), Expect = 3.2e-79
Identity = 159/183 (86.89%), Postives = 165/183 (90.16%), Query Frame = 1

Query: 1   MDSI-TEFEGLNAQQ---FG----GSSVPNLGGGSSSSSSSSSSSSNSRYENQKRRDWNT 60
           MDSI +EFE LN      FG     +++ NL  GSSSSSSSSSSSS  RYENQKRRDWNT
Sbjct: 1   MDSILSEFESLNNNNNPPFGVVVTNNTLQNLVVGSSSSSSSSSSSS--RYENQKRRDWNT 60

Query: 61  FCQYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQ 120
           FCQYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQ
Sbjct: 61  FCQYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQ 120

Query: 121 AWGSLDALIGRLRAAFEENGGMPEANPFGARAIRLYLREVRDVQSKARGISYEKKKRKRP 176
           AWGSLDALIGRLRAAFEENGGMPEANPFGARA+RLYLREVRD+QSKARGISYEKKKRKRP
Sbjct: 121 AWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRP 180

BLAST of Cp4.1LG05g01250 vs. NCBI nr
Match: gi|590715738|ref|XP_007050277.1| (IQ motif and SEC7 domain-containing protein 2 [Theobroma cacao])

HSP 1 Score: 295.8 bits (756), Expect = 5.1e-77
Identity = 153/187 (81.82%), Postives = 163/187 (87.17%), Query Frame = 1

Query: 1   MDSITEFEGLNAQQFGGSSVPNLGGGS-SSSSSSSSSSSNSRYENQKRRDWNTFCQYLKN 60
           MDSI E +  N++     +V N G  S +SSSS SSSS++SRYENQKRRDWNTF QYLKN
Sbjct: 1   MDSIREMDSSNSEN-ASLNVSNNGTASLASSSSPSSSSTSSRYENQKRRDWNTFGQYLKN 60

Query: 61  HRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDA 120
           HRPPL+LSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDA
Sbjct: 61  HRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDA 120

Query: 121 LIGRLRAAFEENGGMPEANPFGARAIRLYLREVRDVQSKARGISYEKKKRKRPQQQ---I 180
           LIGRLRAAFEENGG PEANPFGARA+RLYLREVRD+QSKARGISYEKKKRKRP  Q    
Sbjct: 121 LIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPAQQIPT 180

Query: 181 LPPPTGA 184
           LPPP GA
Sbjct: 181 LPPPPGA 186

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
LSH3_ARATH1.1e-7181.93Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 OS=Arabidopsis thaliana GN=LSH3 PE=1 ... [more]
G1L6_ORYSJ9.4e-7171.89Protein G1-like6 OS=Oryza sativa subsp. japonica GN=G1L6 PE=1 SV=1[more]
G1L6_ORYSI9.4e-7171.89Protein G1-like6 OS=Oryza sativa subsp. indica GN=OsI_09389 PE=3 SV=1[more]
LSH4_ARATH2.1e-7085.26Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana GN=LSH4 PE=1 ... [more]
G1L4_ORYSI6.7e-6971.89Protein G1-like4 OS=Oryza sativa subsp. indica GN=OsI_16643 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LB62_CUCSA7.7e-8087.43Uncharacterized protein OS=Cucumis sativus GN=Csa_3G383780 PE=4 SV=1[more]
A0A061DNN8_THECC3.6e-7781.82IQ motif and SEC7 domain-containing protein 2 OS=Theobroma cacao GN=TCM_004015 P... [more]
B9GS06_POPTR5.2e-7678.35Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s03860g PE=4 SV=2[more]
F6HZL1_VITVI5.2e-7679.46Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g03530 PE=4 SV=... [more]
A0A0D2QFS1_GOSRA5.2e-7678.95Uncharacterized protein OS=Gossypium raimondii GN=B456_001G178100 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G31160.16.2e-7381.93 Protein of unknown function (DUF640)[more]
AT3G23290.21.2e-7185.26 Protein of unknown function (DUF640)[more]
AT5G28490.14.8e-6576.47 Protein of unknown function (DUF640)[more]
AT3G04510.13.4e-6371.79 Protein of unknown function (DUF640)[more]
AT1G07090.17.6e-6373.08 Protein of unknown function (DUF640)[more]
Match NameE-valueIdentityDescription
gi|700202769|gb|KGN57902.1|1.1e-7987.43hypothetical protein Csa_3G383780 [Cucumis sativus][more]
gi|778681005|ref|XP_011651439.1|1.1e-7987.43PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 isoform X2 [Cucumis sativu... [more]
gi|778681002|ref|XP_004152052.2|1.1e-7987.43PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 isoform X1 [Cucumis sativu... [more]
gi|659093194|ref|XP_008447416.1|3.2e-7986.89PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Cucumis melo][more]
gi|590715738|ref|XP_007050277.1|5.1e-7781.82IQ motif and SEC7 domain-containing protein 2 [Theobroma cacao][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006936ALOG_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009855 determination of bilateral symmetry
biological_process GO:0048439 flower morphogenesis
biological_process GO:0010492 maintenance of shoot apical meristem identity
biological_process GO:0010014 meristem initiation
biological_process GO:0010199 organ boundary specification between lateral organs and the meristem
biological_process GO:0048441 petal development
biological_process GO:0009944 polarity specification of adaxial/abaxial axis
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0048834 specification of petal number
biological_process GO:0048438 floral whorl development
biological_process GO:0009299 mRNA transcription
biological_process GO:0009416 response to light stimulus
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g01250.1Cp4.1LG05g01250.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006936ALOG domainPFAMPF04852DUF640coord: 34..154
score: 1.2
IPR006936ALOG domainPROFILEPS51697ALOGcoord: 41..168
score: 84
NoneNo IPR availablePANTHERPTHR31165FAMILY NOT NAMEDcoord: 27..175
score: 1.6E
NoneNo IPR availablePANTHERPTHR31165:SF13PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATEDcoord: 27..175
score: 1.6E

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG05g01250Cp4.1LG15g00860Cucurbita pepo (Zucchini)cpecpeB273
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g01250Cucumber (Chinese Long) v3cpecucB0889
Cp4.1LG05g01250Wax gourdcpewgoB0922
Cp4.1LG05g01250Cucurbita pepo (Zucchini)cpecpeB189
Cp4.1LG05g01250Cucurbita pepo (Zucchini)cpecpeB340
Cp4.1LG05g01250Cucurbita pepo (Zucchini)cpecpeB478
Cp4.1LG05g01250Cucurbita pepo (Zucchini)cpecpeB507
Cp4.1LG05g01250Cucumber (Gy14) v1cgycpeB0683
Cp4.1LG05g01250Cucumber (Gy14) v1cgycpeB1011
Cp4.1LG05g01250Cucurbita maxima (Rimu)cmacpeB290
Cp4.1LG05g01250Cucurbita maxima (Rimu)cmacpeB407
Cp4.1LG05g01250Cucurbita maxima (Rimu)cmacpeB843
Cp4.1LG05g01250Cucurbita maxima (Rimu)cmacpeB930
Cp4.1LG05g01250Cucurbita moschata (Rifu)cmocpeB252
Cp4.1LG05g01250Cucurbita moschata (Rifu)cmocpeB369
Cp4.1LG05g01250Cucurbita moschata (Rifu)cmocpeB791
Cp4.1LG05g01250Cucurbita moschata (Rifu)cmocpeB865
Cp4.1LG05g01250Wild cucumber (PI 183967)cpecpiB716
Cp4.1LG05g01250Wild cucumber (PI 183967)cpecpiB726
Cp4.1LG05g01250Cucumber (Chinese Long) v2cpecuB715
Cp4.1LG05g01250Cucumber (Chinese Long) v2cpecuB724
Cp4.1LG05g01250Bottle gourd (USVL1VR-Ls)cpelsiB584
Cp4.1LG05g01250Watermelon (Charleston Gray)cpewcgB682
Cp4.1LG05g01250Watermelon (97103) v1cpewmB752
Cp4.1LG05g01250Melon (DHL92) v3.5.1cpemeB694
Cp4.1LG05g01250Melon (DHL92) v3.5.1cpemeB702
Cp4.1LG05g01250Cucumber (Gy14) v2cgybcpeB249
Cp4.1LG05g01250Cucumber (Gy14) v2cgybcpeB432
Cp4.1LG05g01250Melon (DHL92) v3.6.1cpemedB825
Cp4.1LG05g01250Melon (DHL92) v3.6.1cpemedB834
Cp4.1LG05g01250Silver-seed gourdcarcpeB0328
Cp4.1LG05g01250Silver-seed gourdcarcpeB0335
Cp4.1LG05g01250Silver-seed gourdcarcpeB1332
Cp4.1LG05g01250Silver-seed gourdcarcpeB1506