BLAST of Cp4.1LG04g15880 vs. Swiss-Prot
Match:
ROC4_NICSY (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1)
HSP 1 Score: 318.9 bits (816), Expect = 5.9e-86
Identity = 185/316 (58.54%), Postives = 226/316 (71.52%), Query Frame = 1
Query: 3 STSATSILKPLSKA-DPCLLSLPSVFTYRAPQSFLSFP---SKFIPF---HLSSSHSSVF 62
S + I+KP S A + CL+SLP +F ++P + P HLS ++S
Sbjct: 2 SCATKPIIKPSSMATNSCLISLPPLFATTTKSKSFAYPYLSNTLKPIKLLHLSCTYSPCI 61
Query: 63 FPSKKKPHLSSLIASVAQEDDTITIDQK--LAGDEEGWEAEGEEV---GGSEAEGGLLEL 122
KKK +S+L +E++T+ +D + +GD +E GEE G EA G E
Sbjct: 62 LSPKKKTSVSAL----QEEENTLILDGQGQESGDLFNFEPSGEETEEEGFVEAVGDAGES 121
Query: 123 GEDE--EEEGSYVEPNEDAKLFVGNLPYDVDSQKLAMLFEKVGTVEIAEVVYNRDTDQSR 182
E E EEE + EP EDAKLFVGNLPYDVDS+ LA LFE+ G VEIAEV+YNRDTDQSR
Sbjct: 122 DEVEADEEEEEFQEPPEDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSR 181
Query: 183 GFGFVTMSTVEEAEKAVDALNRYDLSGRLLTVNKAAPRGSRPEPTPRTFQSAYRLYVGNL 242
GFGFVTMSTVEEAEKAV+ NRYD++GRLLTVNKAA RG RPE PRTF+ +YR+YVGN+
Sbjct: 182 GFGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVNKAARRGERPERPPRTFEQSYRIYVGNI 241
Query: 243 PWDVDNARLEQVFSEHGKVVDARVLFDRDSGRSRGFGFVTMADETGMNDAIAALDGQSID 302
PW +D+ARLEQ+FSEHGKVV ARV++DR++GRSRGFGFVTMA E M+DAIA LDGQS+D
Sbjct: 242 PWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLD 301
Query: 303 GRAIRVNVAEERPRRN 305
GR IRVNVAE+R RRN
Sbjct: 302 GRTIRVNVAEDRSRRN 313
BLAST of Cp4.1LG04g15880 vs. Swiss-Prot
Match:
ROC3_NICSY (28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1)
HSP 1 Score: 317.0 bits (811), Expect = 2.2e-85
Identity = 170/289 (58.82%), Postives = 216/289 (74.74%), Query Frame = 1
Query: 19 CLLSLPSVFTYRAPQSFLSFP---SKFIPFHLSSSHSSVFFPSKKKPHLSSLIASVAQED 78
CL+SLP FT +S S+P ++ P LSSS ++ +K+ + ++ ++++D
Sbjct: 6 CLISLPPFFT--TTKSISSYPFLSTQLKPISLSSSLPTLLSLNKRTTQFPTFVSVLSEDD 65
Query: 79 DTITIDQKLAGDEEGWEAEGEEVGGSEAEGGLLELGEDEEEEGSYVEPNEDAKLFVGNLP 138
+T+ +D +E GG + + E GE EE Y EP+EDAKLFVGNLP
Sbjct: 66 NTLVLDD-------------QEQGG-DFPSFVGEAGETEE----YQEPSEDAKLFVGNLP 125
Query: 139 YDVDSQKLAMLFEKVGTVEIAEVVYNRDTDQSRGFGFVTMSTVEEAEKAVDALNRYDLSG 198
YD+DS+ LA LF++ G VEIAEV+YNR+TD+SRGFGFVTMSTVEEA+KAV+ ++YDL+G
Sbjct: 126 YDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYDLNG 185
Query: 199 RLLTVNKAAPRGSRPEPTPRTFQSAYRLYVGNLPWDVDNARLEQVFSEHGKVVDARVLFD 258
RLLTVNKAAPRGSRPE PRTFQ YR+YVGN+PWD+D+ARLEQVFSEHGKVV ARV+FD
Sbjct: 186 RLLTVNKAAPRGSRPERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFD 245
Query: 259 RDSGRSRGFGFVTMADETGMNDAIAALDGQSIDGRAIRVNVAEERPRRN 305
R+SGRSRGFGFVTM+ E M++AIA LDGQ++DGR IRVN AEERPRRN
Sbjct: 246 RESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNAAEERPRRN 274
BLAST of Cp4.1LG04g15880 vs. Swiss-Prot
Match:
CP31A_ARATH (31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=CP31A PE=1 SV=1)
HSP 1 Score: 307.8 bits (787), Expect = 1.4e-82
Identity = 179/326 (54.91%), Postives = 227/326 (69.63%), Query Frame = 1
Query: 1 MASTSATSILKPLSKADPC---LLSLPSVFTY----RAPQSFLSFPSKFIPFHLSSSHSS 60
MAS+ TS LKPL+ AD + S PS+ + R S +S + I LS S S
Sbjct: 1 MASSIVTSSLKPLAMADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGRINLPLSFSRVS 60
Query: 61 VFFPSKKKPHLSSLIASVAQEDD--------TITIDQKLAGDEEGWEAEGEEVGGSEAEG 120
+ +K S ++ VAQ D ++ +++ E +EG+E G +EG
Sbjct: 61 LSLKTKTHLKKSPFVSFVAQTSDWAEEGGEGSVAVEETENSLESQDVSEGDESEGDASEG 120
Query: 121 GLLELGEDE--------EEEGSYVEPNEDAKLFVGNLPYDVDSQKLAMLFEKVGTVEIAE 180
+ E E E E + EP+E+AKLFVGNL YDV+SQ LAMLFE+ GTVEIAE
Sbjct: 121 DVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAE 180
Query: 181 VVYNRDTDQSRGFGFVTMSTVEEAEKAVDALNRYDLSGRLLTVNKAAPRGSRPEPTPRTF 240
V+YNR+TDQSRGFGFVTMS+V+EAE AV+ NRYDL+GRLLTVNKAAPRGSRPE PR +
Sbjct: 181 VIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVY 240
Query: 241 QSAYRLYVGNLPWDVDNARLEQVFSEHGKVVDARVLFDRDSGRSRGFGFVTMADETGMND 300
+ A+R+YVGNLPWDVDN RLEQ+FSEHGKVV+ARV++DR++GRSRGFGFVTM+D +N+
Sbjct: 241 EPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNE 300
Query: 301 AIAALDGQSIDGRAIRVNVAEERPRR 304
AI+ALDGQ+++GRAIRVNVAEERP R
Sbjct: 301 AISALDGQNLEGRAIRVNVAEERPPR 326
BLAST of Cp4.1LG04g15880 vs. Swiss-Prot
Match:
CP31B_ARATH (RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana GN=CP31B PE=1 SV=1)
HSP 1 Score: 283.5 bits (724), Expect = 2.7e-75
Identity = 161/301 (53.49%), Postives = 212/301 (70.43%), Query Frame = 1
Query: 4 TSATSILKPLSKADPCLLSLPSVFTYRAPQSF-LSFPSKFIPFHLSSSHSSVFFPSKKKP 63
T + +L + + L +PS+F + +S +F P +L+ S SK
Sbjct: 7 TPSLKLLAMTNSSSSTLFCIPSIFNISSSESHRFNFSLSSRPVNLTLS-----LKSKTLR 66
Query: 64 HLSSLIASVAQEDDTITIDQKLAGDEEGWEAEGEEVGGSEAEGGLLELGEDEEEEGSYVE 123
+ S ++ V+Q + A +EEG E +GG+ ++ + E+ + E
Sbjct: 67 NSSPVVTFVSQTSNW-------AEEEEG---EDGSIGGTSVT---VDESFESEDGVGFPE 126
Query: 124 PNEDAKLFVGNLPYDVDSQKLAMLFEKVGTVEIAEVVYNRDTDQSRGFGFVTMSTVEEAE 183
P E+AKLFVGNLPYDVDSQ LAMLFE+ GTVEI+EV+YNRDTDQSRGFGFVTMSTVEEAE
Sbjct: 127 PPEEAKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAE 186
Query: 184 KAVDALNRYDLSGRLLTVNKAAPRGSRPEPTPRTFQSAYRLYVGNLPWDVDNARLEQVFS 243
KAV+ N ++++GR LTVN+AAPRGSRPE PR + +A+R+YVGNLPWDVD+ RLE++FS
Sbjct: 187 KAVEKFNSFEVNGRRLTVNRAAPRGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLERLFS 246
Query: 244 EHGKVVDARVLFDRDSGRSRGFGFVTMADETGMNDAIAALDGQSIDGRAIRVNVAEERPR 303
EHGKVVDARV+ DR++GRSRGFGFV M++E +N AIAALDGQ+++GRAI+VNVAEER R
Sbjct: 247 EHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAALDGQNLEGRAIKVNVAEERTR 289
BLAST of Cp4.1LG04g15880 vs. Swiss-Prot
Match:
ROC1_SPIOL (28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea PE=1 SV=1)
HSP 1 Score: 280.8 bits (717), Expect = 1.8e-74
Identity = 150/227 (66.08%), Postives = 180/227 (79.30%), Query Frame = 1
Query: 91 WEAEGEE----VGGSEAEGGL-----LELGEDEEEEGS--YVEPNEDAKLFVGNLPYDVD 150
WE EG G S+ EG + ++ ++ EG + EP E+AKLFVGNLPYDVD
Sbjct: 8 WEQEGSTNAVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVGNLPYDVD 67
Query: 151 SQKLAMLFEKVGTVEIAEVVYNRDTDQSRGFGFVTMSTVEEAEKAVDALNRYDLSGRLLT 210
S+KLA +F+ G VEIAEV+YNR+TD+SRGFGFVTMSTVEEAEKAV+ LN YD+ GR LT
Sbjct: 68 SEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLT 127
Query: 211 VNKAAPRGSRPEPTPR-TFQSAYRLYVGNLPWDVDNARLEQVFSEHGKVVDARVLFDRDS 270
VNKAAPRGS PE PR F+ + R+YVGNLPWDVD +RLEQ+FSEHGKVV ARV+ DR++
Sbjct: 128 VNKAAPRGS-PERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRET 187
Query: 271 GRSRGFGFVTMADETGMNDAIAALDGQSIDGRAIRVNVAEERPRRNF 306
GRSRGFGFVTM+ E+ +NDAIAALDGQ++DGRA+RVNVAEERPRR F
Sbjct: 188 GRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRAF 233
BLAST of Cp4.1LG04g15880 vs. TrEMBL
Match:
A0A0A0LNS8_CUCSA (Ribonucleoprotein OS=Cucumis sativus GN=Csa_1G002890 PE=4 SV=1)
HSP 1 Score: 454.5 bits (1168), Expect = 1.0e-124
Identity = 247/331 (74.62%), Postives = 268/331 (80.97%), Query Frame = 1
Query: 1 MASTSATSILKPLSKADPCLLSLPSVFTYRAPQSFLSFPSKFIPFHLSSS--HSSVFFPS 60
MAS+SATS+ KPLSK D C LSLPS+FT R P +FLSFPSKFIPFHLSSS +SS F PS
Sbjct: 74 MASSSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSYSSGFSPS 133
Query: 61 KKKPHLSSLIASV--AQEDDTITIDQKLAGDEEG----------------------WEAE 120
KKKPHL S+ + AQEDDTITID KL DE G WE E
Sbjct: 134 KKKPHLPSVAQTSDWAQEDDTITIDPKLDNDENGGEEGGPHWENEELSETESRISDWEGE 193
Query: 121 GEEVGGSEAEGGLLELGEDEEEEGSYVEPNEDAKLFVGNLPYDVDSQKLAMLFEKVGTVE 180
GE+ GGSEAE G E ++E E+G Y EPNEDAKLFVGNLPYD+DS+KLAMLFEK GTVE
Sbjct: 194 GED-GGSEAEVGGDEEEDEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVE 253
Query: 181 IAEVVYNRDTDQSRGFGFVTMSTVEEAEKAVDALNRYDLSGRLLTVNKAAPRGSRPEPTP 240
IAEV+YNR+TD+SRGFGFVTMSTVEEAEKAVD NRYDLSGRLLTVNKAAPRGSR E P
Sbjct: 254 IAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYDLSGRLLTVNKAAPRGSRQEREP 313
Query: 241 RTFQSAYRLYVGNLPWDVDNARLEQVFSEHGKVVDARVLFDRDSGRSRGFGFVTMADETG 300
R FQ +R+YVGNLPWDVDN RLEQ+FSEHGKVVDARVL+DRDSGRSRGFGFVTMADETG
Sbjct: 314 RPFQPTFRIYVGNLPWDVDNGRLEQLFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETG 373
Query: 301 MNDAIAALDGQSIDGRAIRVNVAEERPRRNF 306
MNDAIAALDGQS+DGRAIRVNVAEERPRRNF
Sbjct: 374 MNDAIAALDGQSLDGRAIRVNVAEERPRRNF 403
BLAST of Cp4.1LG04g15880 vs. TrEMBL
Match:
A0A067K455_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11382 PE=4 SV=1)
HSP 1 Score: 374.4 bits (960), Expect = 1.3e-100
Identity = 210/332 (63.25%), Postives = 244/332 (73.49%), Query Frame = 1
Query: 3 STSATSILKPLSKADPCLLSLPSVFTYRAPQSFLSFPSKFIPFHLSS-SHSSVFFPSKKK 62
S +A+ KPLS AD CLLSLPS+FT + P LS P + I HLS SHS K K
Sbjct: 2 SATASPTFKPLSMADSCLLSLPSIFTAKRPYQCLSIPPRPIKLHLSHPSHSLSVLSLKPK 61
Query: 63 PHLSSLIASVAQEDD----------TITI-----------DQKLAGDE---EGWEAEGEE 122
H SSLI VAQ D TITI +Q+ G E WE+EGE+
Sbjct: 62 THFSSLIPFVAQTSDWAQQGEEDETTITITESEQEESTWENQESDGAEARVSDWESEGED 121
Query: 123 V----GGSEAEGGLLELGEDEEEEGSYVEPNEDAKLFVGNLPYDVDSQKLAMLFEKVGTV 182
GG E E G E ++ E + +VEP EDAK+FVGNLPYDVDS+KLAMLFE+ GTV
Sbjct: 122 AAAVAGGDEGESGEEESFQEPEADEGFVEPPEDAKIFVGNLPYDVDSEKLAMLFEQAGTV 181
Query: 183 EIAEVVYNRDTDQSRGFGFVTMSTVEEAEKAVDALNRYDLSGRLLTVNKAAPRGSRPEPT 242
EIAEV+YNR+ D SRGFGFVTMSTVEEAEKAV+ +RYDLSGRLLTVNKA+PRGSRPE
Sbjct: 182 EIAEVIYNRENDSSRGFGFVTMSTVEEAEKAVEMFHRYDLSGRLLTVNKASPRGSRPERP 241
Query: 243 PRTFQSAYRLYVGNLPWDVDNARLEQVFSEHGKVVDARVLFDRDSGRSRGFGFVTMADET 302
PRT++ A+R+YVGNLPWDVDNARLEQVFSEHGKVV+ARV++DR++GRSRGFGFVTMA ET
Sbjct: 242 PRTYEPAFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMASET 301
Query: 303 GMNDAIAALDGQSIDGRAIRVNVAEERPRRNF 306
++DAIAALDG+S+DGRAIRVNVAE RPRRNF
Sbjct: 302 ELHDAIAALDGRSLDGRAIRVNVAEGRPRRNF 333
BLAST of Cp4.1LG04g15880 vs. TrEMBL
Match:
A0A0D2QLE8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G063100 PE=4 SV=1)
HSP 1 Score: 369.0 bits (946), Expect = 5.5e-99
Identity = 208/312 (66.67%), Postives = 240/312 (76.92%), Query Frame = 1
Query: 7 TSILKPLSKADPC-LLSLPSVFTYRAPQ-SFLSFPSKFIPFHLSSSHSSVFFPSKKKPHL 66
+SI KP+S AD C L+ +PS+FT + S LSFP K I LSSSHSS K K H
Sbjct: 2 SSITKPISMADSCCLVCIPSLFTTCSKSPSILSFPPKRINLLLSSSHSSTSLTLKTKAHF 61
Query: 67 SSLIASVAQEDD----------TITIDQKLAGDEEGWEAEGEEVGGSEAEGGLLE-LGED 126
SSL++ VAQ D TITID + +G E WE +E G E E + E D
Sbjct: 62 SSLVSFVAQTSDCAQQEEENDATITIDDEESGIEAKWE--NDESDGPEGEDAVFEEQSGD 121
Query: 127 EEEEGSYVEPNEDAKLFVGNLPYDVDSQKLAMLFEKVGTVEIAEVVYNRDTDQSRGFGFV 186
EEEGS EP+E+AKLFVGNLP DVDSQ LAMLFEK GTVEIAEV+YNRDT+QSRGFGFV
Sbjct: 122 SEEEGS--EPSEEAKLFVGNLPSDVDSQSLAMLFEKAGTVEIAEVIYNRDTEQSRGFGFV 181
Query: 187 TMSTVEEAEKAVDALNRYDLSGRLLTVNKAAPRGSRPEPTPRTFQSAYRLYVGNLPWDVD 246
TMS++EEAEKAV+ NRYDL+GRLLTVNKAAPRGSR + PR F+ A+R+YVGNLPWDVD
Sbjct: 182 TMSSIEEAEKAVEQFNRYDLNGRLLTVNKAAPRGSRLDRPPRVFERAFRVYVGNLPWDVD 241
Query: 247 NARLEQVFSEHGKVVDARVLFDRDSGRSRGFGFVTMADETGMNDAIAALDGQSIDGRAIR 306
NARLEQVFSEHGKVV+ARV++DR++GRSRGFGFVTM+ ET +NDAIAALDGQS+DGRAIR
Sbjct: 242 NARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIR 301
BLAST of Cp4.1LG04g15880 vs. TrEMBL
Match:
A0A0B0MUX7_GOSAR (31 kDa ribonucleoprotein, chloroplastic-like protein OS=Gossypium arboreum GN=F383_32022 PE=4 SV=1)
HSP 1 Score: 367.9 bits (943), Expect = 1.2e-98
Identity = 206/312 (66.03%), Postives = 241/312 (77.24%), Query Frame = 1
Query: 7 TSILKPLSKADPC-LLSLPSVFTYRAPQ-SFLSFPSKFIPFHLSSSHSSVFFPSKKKPHL 66
+SI KP+S AD C L+ +PS+FT + S LSFP K I LSSSHSS K K H
Sbjct: 2 SSITKPISMADSCCLVCIPSLFTTCSKSPSLLSFPPKPINLFLSSSHSSTSLTLKTKTHF 61
Query: 67 SSLIASVAQEDD----------TITIDQKLAGDEEGWEAEGEEVGGSEAEGGLLE-LGED 126
SSL++ VAQ D TITID + +G E WE + + G E + + E D
Sbjct: 62 SSLVSFVAQTSDWAQQEEENDATITIDDEESGIEAKWENDDSD--GPEGKDAVFEEQSRD 121
Query: 127 EEEEGSYVEPNEDAKLFVGNLPYDVDSQKLAMLFEKVGTVEIAEVVYNRDTDQSRGFGFV 186
EEEGS EP+E+AKLFVGNLP+DVDSQ LAMLFEK GTVEIAEV+YNRDT+QSRGFGFV
Sbjct: 122 LEEEGS--EPSEEAKLFVGNLPFDVDSQSLAMLFEKAGTVEIAEVIYNRDTEQSRGFGFV 181
Query: 187 TMSTVEEAEKAVDALNRYDLSGRLLTVNKAAPRGSRPEPTPRTFQSAYRLYVGNLPWDVD 246
TMS++EEAEKAV+ NRYDL+GRLLTVNKAAPRGSR + PR F+ A+R+YVGNLPWDVD
Sbjct: 182 TMSSIEEAEKAVEQFNRYDLNGRLLTVNKAAPRGSRLDRPPRVFERAFRVYVGNLPWDVD 241
Query: 247 NARLEQVFSEHGKVVDARVLFDRDSGRSRGFGFVTMADETGMNDAIAALDGQSIDGRAIR 306
NARLEQVFSEHGKVV+ARV++DR++GRSRGFGFVTM+ ET +NDAIAALDGQS+DGRAIR
Sbjct: 242 NARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIR 301
BLAST of Cp4.1LG04g15880 vs. TrEMBL
Match:
A0A0B0PKT7_GOSAR (31 kDa ribonucleoprotein, chloroplastic-like protein OS=Gossypium arboreum GN=F383_06366 PE=4 SV=1)
HSP 1 Score: 366.7 bits (940), Expect = 2.7e-98
Identity = 208/319 (65.20%), Postives = 243/319 (76.18%), Query Frame = 1
Query: 7 TSILKPLSKADPC-LLSLPSVFTYRAPQ-SFLSFPSKFIPFHLSSSHSSVFFPSKKKPHL 66
+SI K +S AD C L+ +PSVFT + S LSFP K I LSSSHSS K + H
Sbjct: 4 SSITKSISMADSCCLVCIPSVFTTCSKSPSLLSFPPKPINLFLSSSHSSTSLTLKTRTHF 63
Query: 67 SSLIASVAQEDD----------TITIDQKLAGDEEG---WEAE----GEEVGGSEAE-GG 126
SSL++ VAQ D TITID+ + EEG WE + E + G+E E G
Sbjct: 64 SSLVSFVAQTSDWAQQGEENDTTITIDEDESETEEGESKWENDESDGAEAIWGTEGEDAG 123
Query: 127 LLELGEDEEEEGSYVEPNEDAKLFVGNLPYDVDSQKLAMLFEKVGTVEIAEVVYNRDTDQ 186
E D EEEGS EP+E+AKLFVGNLP+DVDSQ LAMLFEK GTVEIAEV+YNRDT+Q
Sbjct: 124 FEEQSGDSEEEGS--EPSEEAKLFVGNLPFDVDSQSLAMLFEKAGTVEIAEVIYNRDTEQ 183
Query: 187 SRGFGFVTMSTVEEAEKAVDALNRYDLSGRLLTVNKAAPRGSRPEPTPRTFQSAYRLYVG 246
SRGFGFVTMS++EEAEKAV+ NRYDL+GRLLTVNKAAPRG+R + PR F+ A+R+YVG
Sbjct: 184 SRGFGFVTMSSIEEAEKAVEQFNRYDLNGRLLTVNKAAPRGTRVDQPPRVFERAFRVYVG 243
Query: 247 NLPWDVDNARLEQVFSEHGKVVDARVLFDRDSGRSRGFGFVTMADETGMNDAIAALDGQS 306
NLPWDVDNARLEQVFSEHGKVV+ARV++DR++GRSRGFGFVTM+ ET +NDAIAALDGQS
Sbjct: 244 NLPWDVDNARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQS 303
BLAST of Cp4.1LG04g15880 vs. TAIR10
Match:
AT4G24770.1 (AT4G24770.1 31-kDa RNA binding protein)
HSP 1 Score: 307.8 bits (787), Expect = 7.7e-84
Identity = 179/326 (54.91%), Postives = 227/326 (69.63%), Query Frame = 1
Query: 1 MASTSATSILKPLSKADPC---LLSLPSVFTY----RAPQSFLSFPSKFIPFHLSSSHSS 60
MAS+ TS LKPL+ AD + S PS+ + R S +S + I LS S S
Sbjct: 1 MASSIVTSSLKPLAMADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGRINLPLSFSRVS 60
Query: 61 VFFPSKKKPHLSSLIASVAQEDD--------TITIDQKLAGDEEGWEAEGEEVGGSEAEG 120
+ +K S ++ VAQ D ++ +++ E +EG+E G +EG
Sbjct: 61 LSLKTKTHLKKSPFVSFVAQTSDWAEEGGEGSVAVEETENSLESQDVSEGDESEGDASEG 120
Query: 121 GLLELGEDE--------EEEGSYVEPNEDAKLFVGNLPYDVDSQKLAMLFEKVGTVEIAE 180
+ E E E E + EP+E+AKLFVGNL YDV+SQ LAMLFE+ GTVEIAE
Sbjct: 121 DVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAE 180
Query: 181 VVYNRDTDQSRGFGFVTMSTVEEAEKAVDALNRYDLSGRLLTVNKAAPRGSRPEPTPRTF 240
V+YNR+TDQSRGFGFVTMS+V+EAE AV+ NRYDL+GRLLTVNKAAPRGSRPE PR +
Sbjct: 181 VIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVY 240
Query: 241 QSAYRLYVGNLPWDVDNARLEQVFSEHGKVVDARVLFDRDSGRSRGFGFVTMADETGMND 300
+ A+R+YVGNLPWDVDN RLEQ+FSEHGKVV+ARV++DR++GRSRGFGFVTM+D +N+
Sbjct: 241 EPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNE 300
Query: 301 AIAALDGQSIDGRAIRVNVAEERPRR 304
AI+ALDGQ+++GRAIRVNVAEERP R
Sbjct: 301 AISALDGQNLEGRAIRVNVAEERPPR 326
BLAST of Cp4.1LG04g15880 vs. TAIR10
Match:
AT5G50250.1 (AT5G50250.1 chloroplast RNA-binding protein 31B)
HSP 1 Score: 283.5 bits (724), Expect = 1.5e-76
Identity = 161/301 (53.49%), Postives = 212/301 (70.43%), Query Frame = 1
Query: 4 TSATSILKPLSKADPCLLSLPSVFTYRAPQSF-LSFPSKFIPFHLSSSHSSVFFPSKKKP 63
T + +L + + L +PS+F + +S +F P +L+ S SK
Sbjct: 7 TPSLKLLAMTNSSSSTLFCIPSIFNISSSESHRFNFSLSSRPVNLTLS-----LKSKTLR 66
Query: 64 HLSSLIASVAQEDDTITIDQKLAGDEEGWEAEGEEVGGSEAEGGLLELGEDEEEEGSYVE 123
+ S ++ V+Q + A +EEG E +GG+ ++ + E+ + E
Sbjct: 67 NSSPVVTFVSQTSNW-------AEEEEG---EDGSIGGTSVT---VDESFESEDGVGFPE 126
Query: 124 PNEDAKLFVGNLPYDVDSQKLAMLFEKVGTVEIAEVVYNRDTDQSRGFGFVTMSTVEEAE 183
P E+AKLFVGNLPYDVDSQ LAMLFE+ GTVEI+EV+YNRDTDQSRGFGFVTMSTVEEAE
Sbjct: 127 PPEEAKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAE 186
Query: 184 KAVDALNRYDLSGRLLTVNKAAPRGSRPEPTPRTFQSAYRLYVGNLPWDVDNARLEQVFS 243
KAV+ N ++++GR LTVN+AAPRGSRPE PR + +A+R+YVGNLPWDVD+ RLE++FS
Sbjct: 187 KAVEKFNSFEVNGRRLTVNRAAPRGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLERLFS 246
Query: 244 EHGKVVDARVLFDRDSGRSRGFGFVTMADETGMNDAIAALDGQSIDGRAIRVNVAEERPR 303
EHGKVVDARV+ DR++GRSRGFGFV M++E +N AIAALDGQ+++GRAI+VNVAEER R
Sbjct: 247 EHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAALDGQNLEGRAIKVNVAEERTR 289
BLAST of Cp4.1LG04g15880 vs. TAIR10
Match:
AT2G37220.1 (AT2G37220.1 RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 186.0 bits (471), Expect = 3.4e-47
Identity = 104/219 (47.49%), Postives = 134/219 (61.19%), Query Frame = 1
Query: 104 EGGLLELGEDEEEEGSYVEPNEDAKLFVGNLPYDVDSQKLAMLFEKVGTVEIAEVVYNRD 163
E G ++ +E+ S D KLFVGNLP++VDS +LA LFE G VE+ EV+Y++
Sbjct: 73 EDGFADVAPPKEQSFS-----ADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKI 132
Query: 164 TDQSRGFGFVTMSTVEEAEKAVDALNRYDLSGRLLTVNKAAPRGSRPEPTPRTFQSAY-- 223
T +SRGFGFVTMS+V E E A N Y+L GR L VN P R + R +S++
Sbjct: 133 TGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGS 192
Query: 224 -----------------RLYVGNLPWDVDNARLEQVFSEHGKVVDARVLFDRDSGRSRGF 283
R+YVGNL W VD+ LE +FSE GKVV+ARV++DRDSGRS+GF
Sbjct: 193 SGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGF 252
Query: 284 GFVTMADETGMNDAIAALDGQSIDGRAIRVNVAEERPRR 304
GFVT + +AI +LDG +DGR IRV+ AE RP R
Sbjct: 253 GFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPR 286
BLAST of Cp4.1LG04g15880 vs. TAIR10
Match:
AT1G60000.1 (AT1G60000.1 RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 158.3 bits (399), Expect = 7.5e-39
Identity = 87/195 (44.62%), Postives = 123/195 (63.08%), Query Frame = 1
Query: 108 LELGEDEEEEGSYVEPNEDA----KLFVGNLPYDVDSQKLAMLFEKVGTVEIAEVVYNRD 167
++L E+E+++G+ + A KL+ GNLPY+VDS LA + + E+ EV+YNRD
Sbjct: 62 VKLEEEEKDDGASAVLDPPAAVNTKLYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRD 121
Query: 168 TDQSRGFGFVTMSTVEEAEKAVDALNRYDLSGRLLTVNKAAPRGSRPEPTPRTFQSAYRL 227
T QSRGF FVTMS VE+ +D L+ + GR L VN A +P P ++ ++L
Sbjct: 122 TGQSRGFAFVTMSNVEDCNIIIDNLDGTEYLGRALKVNFADK--PKPNKEPLYPETEHKL 181
Query: 228 YVGNLPWDVDNARLEQVFSEHGKVVDARVLFDRDSGRSRGFGFVTMADETGMNDAIAALD 287
+VGNL W V + L F E G VV ARV+FD D+GRSRG+GFV + + M A+ +LD
Sbjct: 182 FVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALESLD 241
Query: 288 GQSIDGRAIRVNVAE 299
G ++GRAIRVN+A+
Sbjct: 242 GFELEGRAIRVNLAQ 254
BLAST of Cp4.1LG04g15880 vs. TAIR10
Match:
AT3G52380.1 (AT3G52380.1 chloroplast RNA-binding protein 33)
HSP 1 Score: 153.3 bits (386), Expect = 2.4e-37
Identity = 86/243 (35.39%), Postives = 145/243 (59.67%), Query Frame = 1
Query: 69 ASVAQEDDTITIDQKLAGDEEGWEAEGEEVGGSEAEGGLLELGEDEEEEGSYVEPNEDAK 128
AS A ++ +++++ +EEG EGEE E EEE+ + E+ +
Sbjct: 74 ASSADDEIQASVEEEEEVEEEG--DEGEE--------------EVEEEKQTTQASGEEGR 133
Query: 129 LFVGNLPYDVDSQKLAMLFEKVGTVEIAEVVYNRDTDQSRGFGFVTMSTVEEAEKAVDAL 188
L+VGNLPY + S +L+ +F + GTV ++VY++ TD+SRGFGFVTM ++EEA++A+
Sbjct: 134 LYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMF 193
Query: 189 NRYDLSGRLLTVN-KAAPRGSRPE-------PTPRTF-QSAYRLYVGNLPWDVDNARLEQ 248
N + GR + VN PRG E R++ S +++Y GNL W++ + L+
Sbjct: 194 NSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLKD 253
Query: 249 VFSEHGKVVDARVLFDRDSGRSRGFGFVTMADETGMNDAIAALDGQSIDGRAIRVNVAEE 303
F + V+ A+V+++R++GRSRGFGF++ + A+A ++G ++GRA+R+N+A E
Sbjct: 254 AFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASE 300
BLAST of Cp4.1LG04g15880 vs. NCBI nr
Match:
gi|449440612|ref|XP_004138078.1| (PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis sativus])
HSP 1 Score: 454.5 bits (1168), Expect = 1.4e-124
Identity = 247/331 (74.62%), Postives = 268/331 (80.97%), Query Frame = 1
Query: 1 MASTSATSILKPLSKADPCLLSLPSVFTYRAPQSFLSFPSKFIPFHLSSS--HSSVFFPS 60
MAS+SATS+ KPLSK D C LSLPS+FT R P +FLSFPSKFIPFHLSSS +SS F PS
Sbjct: 1 MASSSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSYSSGFSPS 60
Query: 61 KKKPHLSSLIASV--AQEDDTITIDQKLAGDEEG----------------------WEAE 120
KKKPHL S+ + AQEDDTITID KL DE G WE E
Sbjct: 61 KKKPHLPSVAQTSDWAQEDDTITIDPKLDNDENGGEEGGPHWENEELSETESRISDWEGE 120
Query: 121 GEEVGGSEAEGGLLELGEDEEEEGSYVEPNEDAKLFVGNLPYDVDSQKLAMLFEKVGTVE 180
GE+ GGSEAE G E ++E E+G Y EPNEDAKLFVGNLPYD+DS+KLAMLFEK GTVE
Sbjct: 121 GED-GGSEAEVGGDEEEDEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVE 180
Query: 181 IAEVVYNRDTDQSRGFGFVTMSTVEEAEKAVDALNRYDLSGRLLTVNKAAPRGSRPEPTP 240
IAEV+YNR+TD+SRGFGFVTMSTVEEAEKAVD NRYDLSGRLLTVNKAAPRGSR E P
Sbjct: 181 IAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYDLSGRLLTVNKAAPRGSRQEREP 240
Query: 241 RTFQSAYRLYVGNLPWDVDNARLEQVFSEHGKVVDARVLFDRDSGRSRGFGFVTMADETG 300
R FQ +R+YVGNLPWDVDN RLEQ+FSEHGKVVDARVL+DRDSGRSRGFGFVTMADETG
Sbjct: 241 RPFQPTFRIYVGNLPWDVDNGRLEQLFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETG 300
Query: 301 MNDAIAALDGQSIDGRAIRVNVAEERPRRNF 306
MNDAIAALDGQS+DGRAIRVNVAEERPRRNF
Sbjct: 301 MNDAIAALDGQSLDGRAIRVNVAEERPRRNF 330
BLAST of Cp4.1LG04g15880 vs. NCBI nr
Match:
gi|700208424|gb|KGN63520.1| (Ribonucleoprotein [Cucumis sativus])
HSP 1 Score: 454.5 bits (1168), Expect = 1.4e-124
Identity = 247/331 (74.62%), Postives = 268/331 (80.97%), Query Frame = 1
Query: 1 MASTSATSILKPLSKADPCLLSLPSVFTYRAPQSFLSFPSKFIPFHLSSS--HSSVFFPS 60
MAS+SATS+ KPLSK D C LSLPS+FT R P +FLSFPSKFIPFHLSSS +SS F PS
Sbjct: 74 MASSSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSYSSGFSPS 133
Query: 61 KKKPHLSSLIASV--AQEDDTITIDQKLAGDEEG----------------------WEAE 120
KKKPHL S+ + AQEDDTITID KL DE G WE E
Sbjct: 134 KKKPHLPSVAQTSDWAQEDDTITIDPKLDNDENGGEEGGPHWENEELSETESRISDWEGE 193
Query: 121 GEEVGGSEAEGGLLELGEDEEEEGSYVEPNEDAKLFVGNLPYDVDSQKLAMLFEKVGTVE 180
GE+ GGSEAE G E ++E E+G Y EPNEDAKLFVGNLPYD+DS+KLAMLFEK GTVE
Sbjct: 194 GED-GGSEAEVGGDEEEDEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVE 253
Query: 181 IAEVVYNRDTDQSRGFGFVTMSTVEEAEKAVDALNRYDLSGRLLTVNKAAPRGSRPEPTP 240
IAEV+YNR+TD+SRGFGFVTMSTVEEAEKAVD NRYDLSGRLLTVNKAAPRGSR E P
Sbjct: 254 IAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYDLSGRLLTVNKAAPRGSRQEREP 313
Query: 241 RTFQSAYRLYVGNLPWDVDNARLEQVFSEHGKVVDARVLFDRDSGRSRGFGFVTMADETG 300
R FQ +R+YVGNLPWDVDN RLEQ+FSEHGKVVDARVL+DRDSGRSRGFGFVTMADETG
Sbjct: 314 RPFQPTFRIYVGNLPWDVDNGRLEQLFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETG 373
Query: 301 MNDAIAALDGQSIDGRAIRVNVAEERPRRNF 306
MNDAIAALDGQS+DGRAIRVNVAEERPRRNF
Sbjct: 374 MNDAIAALDGQSLDGRAIRVNVAEERPRRNF 403
BLAST of Cp4.1LG04g15880 vs. NCBI nr
Match:
gi|802649492|ref|XP_012079947.1| (PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Jatropha curcas])
HSP 1 Score: 374.4 bits (960), Expect = 1.9e-100
Identity = 210/332 (63.25%), Postives = 244/332 (73.49%), Query Frame = 1
Query: 3 STSATSILKPLSKADPCLLSLPSVFTYRAPQSFLSFPSKFIPFHLSS-SHSSVFFPSKKK 62
S +A+ KPLS AD CLLSLPS+FT + P LS P + I HLS SHS K K
Sbjct: 2 SATASPTFKPLSMADSCLLSLPSIFTAKRPYQCLSIPPRPIKLHLSHPSHSLSVLSLKPK 61
Query: 63 PHLSSLIASVAQEDD----------TITI-----------DQKLAGDE---EGWEAEGEE 122
H SSLI VAQ D TITI +Q+ G E WE+EGE+
Sbjct: 62 THFSSLIPFVAQTSDWAQQGEEDETTITITESEQEESTWENQESDGAEARVSDWESEGED 121
Query: 123 V----GGSEAEGGLLELGEDEEEEGSYVEPNEDAKLFVGNLPYDVDSQKLAMLFEKVGTV 182
GG E E G E ++ E + +VEP EDAK+FVGNLPYDVDS+KLAMLFE+ GTV
Sbjct: 122 AAAVAGGDEGESGEEESFQEPEADEGFVEPPEDAKIFVGNLPYDVDSEKLAMLFEQAGTV 181
Query: 183 EIAEVVYNRDTDQSRGFGFVTMSTVEEAEKAVDALNRYDLSGRLLTVNKAAPRGSRPEPT 242
EIAEV+YNR+ D SRGFGFVTMSTVEEAEKAV+ +RYDLSGRLLTVNKA+PRGSRPE
Sbjct: 182 EIAEVIYNRENDSSRGFGFVTMSTVEEAEKAVEMFHRYDLSGRLLTVNKASPRGSRPERP 241
Query: 243 PRTFQSAYRLYVGNLPWDVDNARLEQVFSEHGKVVDARVLFDRDSGRSRGFGFVTMADET 302
PRT++ A+R+YVGNLPWDVDNARLEQVFSEHGKVV+ARV++DR++GRSRGFGFVTMA ET
Sbjct: 242 PRTYEPAFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMASET 301
Query: 303 GMNDAIAALDGQSIDGRAIRVNVAEERPRRNF 306
++DAIAALDG+S+DGRAIRVNVAE RPRRNF
Sbjct: 302 ELHDAIAALDGRSLDGRAIRVNVAEGRPRRNF 333
BLAST of Cp4.1LG04g15880 vs. NCBI nr
Match:
gi|823121829|ref|XP_012468629.1| (PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Gossypium raimondii])
HSP 1 Score: 369.0 bits (946), Expect = 7.9e-99
Identity = 208/312 (66.67%), Postives = 240/312 (76.92%), Query Frame = 1
Query: 7 TSILKPLSKADPC-LLSLPSVFTYRAPQ-SFLSFPSKFIPFHLSSSHSSVFFPSKKKPHL 66
+SI KP+S AD C L+ +PS+FT + S LSFP K I LSSSHSS K K H
Sbjct: 2 SSITKPISMADSCCLVCIPSLFTTCSKSPSILSFPPKRINLLLSSSHSSTSLTLKTKAHF 61
Query: 67 SSLIASVAQEDD----------TITIDQKLAGDEEGWEAEGEEVGGSEAEGGLLE-LGED 126
SSL++ VAQ D TITID + +G E WE +E G E E + E D
Sbjct: 62 SSLVSFVAQTSDCAQQEEENDATITIDDEESGIEAKWE--NDESDGPEGEDAVFEEQSGD 121
Query: 127 EEEEGSYVEPNEDAKLFVGNLPYDVDSQKLAMLFEKVGTVEIAEVVYNRDTDQSRGFGFV 186
EEEGS EP+E+AKLFVGNLP DVDSQ LAMLFEK GTVEIAEV+YNRDT+QSRGFGFV
Sbjct: 122 SEEEGS--EPSEEAKLFVGNLPSDVDSQSLAMLFEKAGTVEIAEVIYNRDTEQSRGFGFV 181
Query: 187 TMSTVEEAEKAVDALNRYDLSGRLLTVNKAAPRGSRPEPTPRTFQSAYRLYVGNLPWDVD 246
TMS++EEAEKAV+ NRYDL+GRLLTVNKAAPRGSR + PR F+ A+R+YVGNLPWDVD
Sbjct: 182 TMSSIEEAEKAVEQFNRYDLNGRLLTVNKAAPRGSRLDRPPRVFERAFRVYVGNLPWDVD 241
Query: 247 NARLEQVFSEHGKVVDARVLFDRDSGRSRGFGFVTMADETGMNDAIAALDGQSIDGRAIR 306
NARLEQVFSEHGKVV+ARV++DR++GRSRGFGFVTM+ ET +NDAIAALDGQS+DGRAIR
Sbjct: 242 NARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIR 301
BLAST of Cp4.1LG04g15880 vs. NCBI nr
Match:
gi|728824702|gb|KHG05903.1| (31 kDa ribonucleoprotein, chloroplastic -like protein [Gossypium arboreum])
HSP 1 Score: 367.9 bits (943), Expect = 1.8e-98
Identity = 206/312 (66.03%), Postives = 241/312 (77.24%), Query Frame = 1
Query: 7 TSILKPLSKADPC-LLSLPSVFTYRAPQ-SFLSFPSKFIPFHLSSSHSSVFFPSKKKPHL 66
+SI KP+S AD C L+ +PS+FT + S LSFP K I LSSSHSS K K H
Sbjct: 2 SSITKPISMADSCCLVCIPSLFTTCSKSPSLLSFPPKPINLFLSSSHSSTSLTLKTKTHF 61
Query: 67 SSLIASVAQEDD----------TITIDQKLAGDEEGWEAEGEEVGGSEAEGGLLE-LGED 126
SSL++ VAQ D TITID + +G E WE + + G E + + E D
Sbjct: 62 SSLVSFVAQTSDWAQQEEENDATITIDDEESGIEAKWENDDSD--GPEGKDAVFEEQSRD 121
Query: 127 EEEEGSYVEPNEDAKLFVGNLPYDVDSQKLAMLFEKVGTVEIAEVVYNRDTDQSRGFGFV 186
EEEGS EP+E+AKLFVGNLP+DVDSQ LAMLFEK GTVEIAEV+YNRDT+QSRGFGFV
Sbjct: 122 LEEEGS--EPSEEAKLFVGNLPFDVDSQSLAMLFEKAGTVEIAEVIYNRDTEQSRGFGFV 181
Query: 187 TMSTVEEAEKAVDALNRYDLSGRLLTVNKAAPRGSRPEPTPRTFQSAYRLYVGNLPWDVD 246
TMS++EEAEKAV+ NRYDL+GRLLTVNKAAPRGSR + PR F+ A+R+YVGNLPWDVD
Sbjct: 182 TMSSIEEAEKAVEQFNRYDLNGRLLTVNKAAPRGSRLDRPPRVFERAFRVYVGNLPWDVD 241
Query: 247 NARLEQVFSEHGKVVDARVLFDRDSGRSRGFGFVTMADETGMNDAIAALDGQSIDGRAIR 306
NARLEQVFSEHGKVV+ARV++DR++GRSRGFGFVTM+ ET +NDAIAALDGQS+DGRAIR
Sbjct: 242 NARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIR 301
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| ROC4_NICSY | 5.9e-86 | 58.54 | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1 | [more] |
| ROC3_NICSY | 2.2e-85 | 58.82 | 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1 | [more] |
| CP31A_ARATH | 1.4e-82 | 54.91 | 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=CP31A PE=1 SV... | [more] |
| CP31B_ARATH | 2.7e-75 | 53.49 | RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana GN=CP31B PE=1 S... | [more] |
| ROC1_SPIOL | 1.8e-74 | 66.08 | 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea PE=1 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LNS8_CUCSA | 1.0e-124 | 74.62 | Ribonucleoprotein OS=Cucumis sativus GN=Csa_1G002890 PE=4 SV=1 | [more] |
| A0A067K455_JATCU | 1.3e-100 | 63.25 | Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11382 PE=4 SV=1 | [more] |
| A0A0D2QLE8_GOSRA | 5.5e-99 | 66.67 | Uncharacterized protein OS=Gossypium raimondii GN=B456_001G063100 PE=4 SV=1 | [more] |
| A0A0B0MUX7_GOSAR | 1.2e-98 | 66.03 | 31 kDa ribonucleoprotein, chloroplastic-like protein OS=Gossypium arboreum GN=F3... | [more] |
| A0A0B0PKT7_GOSAR | 2.7e-98 | 65.20 | 31 kDa ribonucleoprotein, chloroplastic-like protein OS=Gossypium arboreum GN=F3... | [more] |
