Cp4.1LG04g11780 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g11780
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	6,7-dimethyl-8-ribityllumazine synthase
Location	Cp4.1LG04 : 8643206 .. 8645812 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAACGACGTCGTTTTAGAGCTAAAGAGCTTCACAGTCTCGTCTCTCTCGCGCTCTTCGTCGATTACAGTTTCTTCAGCCTGCAACTCAAGAATGCTTCACTCTCTCGTTCAAACCACTCTCCCTTCGCCTTACCAATTCACCTCCTTCCGCTTCAACTTACACAATTTCGATTCGATCAATCTTCTTCCCAAAACCCTTTTCCCTGATTTTGGACGCGAATCCAAAAATTCCTTCAAAACATTCATCATTTTCCACAAAAGATTCAGTAAATCCCGCTCCAACAGGCTCAATTCGTCGATCGTCGCTCACGCTTCTTTAATCGAGGCGCCGATTTTGTGGGCTGGTAGAGTTTGCATCTTCTATGCCCTTCTTAGAGTTGGTTTGGCTGGATCTCAATCTAATCCACTTGTTTCAGGTTGTGTTCGTCATCTGTGTTTCTTCATTTCTAGGCTGTTGAATGTTTTTATTTGGAAATCTTGTGTTTATGATTGTTTTTCTTCTCCAGATTTGGAATTCTCCGATGGGGAAATTATCAGTGATTTGGGGTTTTCTAAGTGGTTGGAAGTTGTAAGAGGAAAGCCAGGTTTGTGGGACTTAAGCTCTCTTGCTCATTGATTGATCTATGAACTTATGAACACACTAAATTCAGCAAAACTTGTTATGTTAATATCATGAACTGAAGAATTCGATCATTTCTACATTGAATGTTAGGCTGGAAGCTATGCTTTGTAACTCTATTTGATAGGACGTTCTTGTTTATAGTTTCCTTTTTGTAATATCTCATTATATGAATGTGATATCTATATCCTACTAAAAGGAGTGTCTGGAATGGTAGGCTTGTAGCCCATCTACAATTCTAAATGATCCTTGTGTGCAATGTTTTTGAGTTGAAATGTTCATTGCAGTTTTAAGCTGCTGCTACATTTCAATCCTGCTTTTAATAATGTGTTTGATCTTATATCCTAGAGTTTGGTATGGTCATTCATGTTCGTGGTTGATCTACAATAACTAATATCCATTGGATGTAAACTGAACTTGTTATGTCAATTATCAACGAAAGGGTCATATCATTATGGGACTTTGTGATGTTGCACCATTTTCTCTGTTAAATGACACTAGAGCAAGAATTATGGTTGTTGCTAGCAGATATTGTCTTCTTTGAGTTTTCCCTTTTGGGCTTTCCTTCAAGGTTTTTAAGACGCGCATGCTAGGAAGAGGTTTCCACGCCCTTATAAGGAATGATTTGTTCTCCTCTCCAACCAATGTGGGATCTCACAATCCACCTTCTTTCGGGGCCTGGCATCTTCGTTGGCTCACCACCCAGTGTCTGGCTCTGATACCATTTTTTGATTTGTGCGTGTCATCCTTCCGTAGGGGTCATGCTAATCTTCTTTGTATCGTTTCAATTTTATTGGATGTCCCCTTTATTGTGAGATTCAACATTGGTTGAAGAGGGGAACGAAACATTCATTATAAGGGTTTGGAAACCTCTTCCTAGCATATGCGTTTTAAAAACCTTGAGGGGAAGCTCGAAAGGAAAAGTCATATCTGCTCGTCTGCTCGCGGTGGACTTAGGCGGTTACAAATGATATTAGAGGCAGTCACTGGACAGTGCGAGACACTGGTTGGAGTAGGGCTAGACCGTCTCCATAGTAGATACATTTTAAAACCTTGAGGGGAAGCCCAAAGAAGACAATATTTGCTAGCGGTGGACTTGGGCTGTTATAAATGGTATTAGAGCTAGTCACCGGACGGTGCGAGACACTGGTCGGAGTAGTGCTAGACTCTCTCCACAATAGACGCGTTTTAAAAACCTTGAGGGGAAGTCCAGAAGAGAAAGCCCAAAGAGAACAATATCTGGTAGTAGTGGGCTTAAGCTATTACATATCATCAAGAATTTTACAGTGAATGAACATTCCACTTTCTTGTTTTTATTGGCAGTGGATGAAGCAGTTGATAAAAGGAAACTAGTGAGTAAATGGCATCCTACCACAAAGGGTACCCTCAGAAGGAACTACCGGGTACCTTCGAAATCCGAAGGACGACGCCTTCTTAAAGCCATCGCATCCCTCCTTTCCGATGACGATCACTTCATCGACGCCACTTCCCACAAGGTTGTAAATCCATTCCTTCCTTTCTATATAATGTGATGTCTGGTATCTACACCGTTCACTCTTCACACACGCAAGCCATTTCCTTTTCGTTTCGTTTCGTTTCATGATTCTCGAAGACATTACGACATAGGAGACGTGGTTTCATTGTTATAAACATCGCTTGGTTTGTCATTGGTAGGGTTGTCAAATCAGGAGGGAAAGTGCTCATGGGGAGAGTGTTTGCTGCAACAATGTGAGAGCTCTGTTTGATGAGCTTCCAACCCCACATCTTACTGTGGAAATAACTCCATTCCCTGCTGGGCCTCTCAATCAAAAGGATTACACCAAGGCTGAGAAACTAGAGAGAGTGCTCAGATCTGGCCCTTCTGTTTGAGACACTCCTTTTACACCTCTCTGTATTTTGTATCTCAACTTCTCTGTATAGCGTTTAAAGGAATCAATCTCGACCGGGACATCGTTTTAGACATTATATTAGCGGTTTCTATTTGACT

mRNA sequence

TAAACGACGTCGTTTTAGAGCTAAAGAGCTTCACAGTCTCGTCTCTCTCGCGCTCTTCGTCGATTACAGTTTCTTCAGCCTGCAACTCAAGAATGCTTCACTCTCTCGTTCAAACCACTCTCCCTTCGCCTTACCAATTCACCTCCTTCCGCTTCAACTTACACAATTTCGATTCGATCAATCTTCTTCCCAAAACCCTTTTCCCTGATTTTGGACGCGAATCCAAAAATTCCTTCAAAACATTCATCATTTTCCACAAAAGATTCAGTAAATCCCGCTCCAACAGGCTCAATTCGTCGATCGTCGCTCACGCTTCTTTAATCGAGGCGCCGATTTTGTGGGCTGGTAGAGTTTGCATCTTCTATGCCCTTCTTAGAGTTGGTTTGGCTGGATCTCAATCTAATCCACTTGTTTCAGATTTGGAATTCTCCGATGGGGAAATTATCAGTGATTTGGGGTTTTCTAAGTGGTTGGAAGTTGTAAGAGGAAAGCCAGTGGATGAAGCAGTTGATAAAAGGAAACTAGTGAGTAAATGGCATCCTACCACAAAGGGTACCCTCAGAAGGAACTACCGGGTACCTTCGAAATCCGAAGGACGACGCCTTCTTAAAGCCATCGCATCCCTCCTTTCCGATGACGATCACTTCATCGACGCCACTTCCCACAAGGGTTGTCAAATCAGGAGGGAAAGTGCTCATGGGGAGAGTGTTTGCTGCAACAATGTGAGAGCTCTGTTTGATGAGCTTCCAACCCCACATCTTACTGTGGAAATAACTCCATTCCCTGCTGGGCCTCTCAATCAAAAGGATTACACCAAGGCTGAGAAACTAGAGAGAGTGCTCAGATCTGGCCCTTCTGTTTGAGACACTCCTTTTACACCTCTCTGTATTTTGTATCTCAACTTCTCTGTATAGCGTTTAAAGGAATCAATCTCGACCGGGACATCGTTTTAGACATTATATTAGCGGTTTCTATTTGACT

Coding sequence (CDS)

ATGCTTCACTCTCTCGTTCAAACCACTCTCCCTTCGCCTTACCAATTCACCTCCTTCCGCTTCAACTTACACAATTTCGATTCGATCAATCTTCTTCCCAAAACCCTTTTCCCTGATTTTGGACGCGAATCCAAAAATTCCTTCAAAACATTCATCATTTTCCACAAAAGATTCAGTAAATCCCGCTCCAACAGGCTCAATTCGTCGATCGTCGCTCACGCTTCTTTAATCGAGGCGCCGATTTTGTGGGCTGGTAGAGTTTGCATCTTCTATGCCCTTCTTAGAGTTGGTTTGGCTGGATCTCAATCTAATCCACTTGTTTCAGATTTGGAATTCTCCGATGGGGAAATTATCAGTGATTTGGGGTTTTCTAAGTGGTTGGAAGTTGTAAGAGGAAAGCCAGTGGATGAAGCAGTTGATAAAAGGAAACTAGTGAGTAAATGGCATCCTACCACAAAGGGTACCCTCAGAAGGAACTACCGGGTACCTTCGAAATCCGAAGGACGACGCCTTCTTAAAGCCATCGCATCCCTCCTTTCCGATGACGATCACTTCATCGACGCCACTTCCCACAAGGGTTGTCAAATCAGGAGGGAAAGTGCTCATGGGGAGAGTGTTTGCTGCAACAATGTGAGAGCTCTGTTTGATGAGCTTCCAACCCCACATCTTACTGTGGAAATAACTCCATTCCCTGCTGGGCCTCTCAATCAAAAGGATTACACCAAGGCTGAGAAACTAGAGAGAGTGCTCAGATCTGGCCCTTCTGTTTGA

Protein sequence

MLHSLVQTTLPSPYQFTSFRFNLHNFDSINLLPKTLFPDFGRESKNSFKTFIIFHKRFSKSRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRVGLAGSQSNPLVSDLEFSDGEIISDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV

Homology

[Close]

BLAST of Cp4.1LG04g11780 vs. TrEMBL
Match: A0A0A0LX12_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G604060 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 5.5e-108
Identity = 206/263 (78.33%), Postives = 221/263 (84.03%), Query Frame = 1


Query: 1   MLHSLVQTTLPSPYQFTSFRFNLHNFDSINLL-PKTLFPDFGRESKNSFKTFIIFHK-RF 60
           MLHSL+     SP Q ++F F+ H+ +SINLL PK+LFP F    KN+  TF+ FHK R 
Sbjct: 1   MLHSLI-----SPSQSSTFPFHFHSLNSINLLLPKSLFPGFPSHPKNALTTFLHFHKTRS 60

Query: 61  SKSRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRVGLAGSQSNPLVSDLEFS----- 120
           +KS SN  NS     ASLIEAPILWAGR+CIFYALLR GLAGSQSNPL+SDL+ S     
Sbjct: 61  NKSLSNTFNSPSSTRASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLISDLDLSYGGSS 120

Query: 121 DGEIISDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLK 180
           DGE  SDLGFSKWLE VRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLK
Sbjct: 121 DGESSSDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLK 180

Query: 181 AIASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAG 240
           AI SLLSDDDHF+DATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHL VEITPFPAG
Sbjct: 181 AIMSLLSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAG 240

Query: 241 PLNQKDYTKAEKLERVLRSGPSV 257
           PLN+ DYTKAEKLERVLRSGPSV
Sbjct: 241 PLNENDYTKAEKLERVLRSGPSV 258

[Close]

BLAST of Cp4.1LG04g11780 vs. TrEMBL
Match: M5XTH2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010280mg PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 2.0e-94
Identity = 189/264 (71.59%), Postives = 212/264 (80.30%), Query Frame = 1


Query: 1   MLHSLVQTTLPS-PYQFTSFRFNLHNFDSINLLPKTLFPDFGRESKNSFKTFIIFHKR-- 60
           ML SLVQTTL S P+Q  SF+  LH      +LPKTLF   G E  N+ K  + F +R  
Sbjct: 1   MLLSLVQTTLTSSPFQSPSFKI-LH---PATVLPKTLFLGLGIEPTNALKRLLFFSQRSH 60

Query: 61  FSKSRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRVGLAGSQSNPLVSDL---EFSD 120
           ++KSR+ RL      HASL+EAP+LWAGR+CIFYALL+ GLAGSQ+NPLVSDL   E  D
Sbjct: 61  YTKSRNPRLT----IHASLLEAPVLWAGRLCIFYALLKTGLAGSQANPLVSDLGSTEEGD 120

Query: 121 GEII--SDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLL 180
           G  I  +DLGFS+WL  ++GKPV EA D+RKLVSKWHPTTKGTLRRNYRVPSKSEGRR L
Sbjct: 121 GVGIESADLGFSRWLNSIQGKPVKEAADRRKLVSKWHPTTKGTLRRNYRVPSKSEGRRAL 180

Query: 181 KAIASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPA 240
           KAIASLLS+DDHF+DATSHKGCQIRRESAHGE+VCCNNVRALFDELPTPHL VEITPFPA
Sbjct: 181 KAIASLLSEDDHFVDATSHKGCQIRRESAHGETVCCNNVRALFDELPTPHLVVEITPFPA 240

Query: 241 GPLNQKDYTKAEKLERVLRSGPSV 257
           G L + DYTKAEKLERVLRSGPSV
Sbjct: 241 GSLTETDYTKAEKLERVLRSGPSV 256

[Close]

BLAST of Cp4.1LG04g11780 vs. TrEMBL
Match: A9PIB4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s21420g PE=2 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 3.9e-90
Identity = 177/260 (68.08%), Postives = 200/260 (76.92%), Query Frame = 1


Query: 1   MLHSLVQTTLPSPYQF-TSFRFNLHNFDSINLLPKTLFPDFGRESKNSFKTFIIFHKRFS 60
           ML SLVQT   SP+Q  T  RFN     S  LLPK+LFP F   SK   +   +F    +
Sbjct: 1   MLLSLVQTIYTSPFQSKTLTRFN-SVIKSTTLLPKSLFPTFDCPSKTFSR---LFFNGNT 60

Query: 61  KSRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRVGLAGSQSNPLVSDLE---FSDGE 120
           + R     +S   HASLIEAP+LW GR+CIFYALL+ GLAGS++NPLVS L+      G 
Sbjct: 61  RDRKLTAGASFTVHASLIEAPVLWVGRLCIFYALLKAGLAGSEANPLVSGLDGGGVGGGA 120

Query: 121 IISDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIA 180
              DLGFSKW+E ++GKP  EA DKRKLVSKWHPTTKGTLRRNYRVPSKSEG+R LKAIA
Sbjct: 121 ESGDLGFSKWIEAIQGKPDKEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGQRRLKAIA 180

Query: 181 SLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLN 240
           +LLS+DD+F+DATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHL VEIT FPAGPL 
Sbjct: 181 ALLSEDDYFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLLVEITAFPAGPLT 240

Query: 241 QKDYTKAEKLERVLRSGPSV 257
           +KDY KAEKLERVLRSGPS+
Sbjct: 241 EKDYVKAEKLERVLRSGPSI 256

[Close]

BLAST of Cp4.1LG04g11780 vs. TrEMBL
Match: B9SY01_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1455560 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 4.4e-89
Identity = 175/262 (66.79%), Postives = 202/262 (77.10%), Query Frame = 1


Query: 1   MLHSLVQTTLPSPYQFTSFRFNLHNFDSINLLPKTLFPDF---GRESKNSFKTFIIFHKR 60
           M++SLVQ+     +Q  ++  N    +  +LLPK+LFP F   G     + K F+   KR
Sbjct: 1   MVNSLVQSVYTPSFQSNNYN-NTKIINPTSLLPKSLFPTFDTNGNHPTKTLKRFLYLTKR 60

Query: 61  FSKSRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRVGLAGSQSNPLVSDLEFSDGEI 120
              +R     +    +ASL+E P+LWAGR+CIFYALL+ GLAGS++NPLVS L+  DGE 
Sbjct: 61  SFATRK----TVTTTNASLLETPVLWAGRLCIFYALLKSGLAGSKTNPLVSGLD-GDGES 120

Query: 121 I---SDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKA 180
                DLGFSKWLE ++GKP  EA D+RKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKA
Sbjct: 121 AVESGDLGFSKWLENIQGKPDKEAADRRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKA 180

Query: 181 IASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGP 240
           IASLLSDDDHFI+ATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHL VEIT FPAGP
Sbjct: 181 IASLLSDDDHFIEATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLVVEITAFPAGP 240

Query: 241 LNQKDYTKAEKLERVLRSGPSV 257
           L +KDY KAEKLERVLRSGPS+
Sbjct: 241 LTEKDYVKAEKLERVLRSGPSI 256

[Close]

BLAST of Cp4.1LG04g11780 vs. TrEMBL
Match: A0A061GT71_THECC (6,7-dimethyl-8-ribityllumazine synthase OS=Theobroma cacao GN=TCM_040239 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.1e-87
Identity = 180/259 (69.50%), Postives = 200/259 (77.22%), Query Frame = 1


Query: 1   MLHSLVQTTLPSPYQFTS-FRFNLHNFDSINLLPKTLFPDFGRESKNSFKTFIIFHKRFS 60
           ML SLVQ++  S   F S    NL+      LLPKTLFP F  +  +  KT +    R  
Sbjct: 1   MLLSLVQSSFISSSTFHSKIHTNLNPLKPSFLLPKTLFPIFNTQPTS--KTLLKLSPR-- 60

Query: 61  KSRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRVGLAGSQSNPLVSDLEFSDGEI-- 120
                  N++ +  ASL+EAP+LWAGR+CI+YALL+ GLAGSQ+NPLVS LE S G I  
Sbjct: 61  -------NATGIC-ASLLEAPVLWAGRLCIYYALLKAGLAGSQANPLVSGLE-SGGTIGE 120

Query: 121 ISDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIAS 180
             DLGFSKWLE ++GKP  EA DKRKLVSKWHPTTKGTL+RNYRVPSKSEGRRLLKA+A 
Sbjct: 121 SGDLGFSKWLENIQGKPDKEAADKRKLVSKWHPTTKGTLKRNYRVPSKSEGRRLLKAVAF 180

Query: 181 LLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQ 240
           LLSDDDHF DATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPL +
Sbjct: 181 LLSDDDHFTDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLTE 240

Query: 241 KDYTKAEKLERVLRSGPSV 257
           KDY KAEKLERVLRS PSV
Sbjct: 241 KDYVKAEKLERVLRSAPSV 246

[Close]

BLAST of Cp4.1LG04g11780 vs. TAIR10
Match: AT3G32930.1 (AT3G32930.1 unknown protein)

HSP 1 Score: 304.3 bits (778), Expect = 7.1e-83
Identity = 162/262 (61.83%), Postives = 193/262 (73.66%), Query Frame = 1


Query: 4   SLVQTTLPSPYQFTSFRFNLHNFD-SINLLPKTLFPDFGRESKNSFKTFIIFHKRFSKSR 63
           SLVQ +  S ++  S    L N + S  LL K++FP     SK +      + K+ S   
Sbjct: 4   SLVQVSSVSNFRSQSTIPTLSNSNPSCLLLQKSIFPG----SKLTLHRIFRYPKKISNGS 63

Query: 64  SNRLNSSIVAHASLIEAPILWAGRVCIFYALLRVGLAGSQSNPLVS-------DLEFSDG 123
           +          ASL+E PILWAGR+C+FYAL++ G AGS+SNP+VS       D+E+ DG
Sbjct: 64  TR---------ASLLETPILWAGRICVFYALVKAGFAGSKSNPIVSGLDTGGVDVEYDDG 123

Query: 124 EIISDLGFSKWLEVVRG-KPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKA 183
              +DLGFSKWL+ ++G KP  +A DKRKLVSKWHPTTKGTLRRNYR+PSK+EG RLLKA
Sbjct: 124 ---ADLGFSKWLQNIKGNKPDKDAADKRKLVSKWHPTTKGTLRRNYRIPSKAEGNRLLKA 183

Query: 184 IASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGP 243
           IASLLSDDDHF DATSHKGCQIRRESAHG+SVCCNNVRALFDELPTPHL VEITPFPAGP
Sbjct: 184 IASLLSDDDHFRDATSHKGCQIRRESAHGQSVCCNNVRALFDELPTPHLVVEITPFPAGP 243

Query: 244 LNQKDYTKAEKLERVLRSGPSV 257
           L + DY KAEKLER+LRSG ++
Sbjct: 244 LTENDYLKAEKLERILRSGANI 249

[Close]

BLAST of Cp4.1LG04g11780 vs. NCBI nr
Match: gi|659100443|ref|XP_008451102.1| (PREDICTED: uncharacterized protein LOC103492482 [Cucumis melo])

HSP 1 Score: 401.0 bits (1029), Expect = 1.6e-108
Identity = 207/263 (78.71%), Postives = 223/263 (84.79%), Query Frame = 1


Query: 1   MLHSLVQTTLPSPYQFTSFRFNLHNFDSINLL-PKTLFPDFGRESKNSFKTFIIFHK-RF 60
           ML+SL+     SP Q ++F F+ H+ +SINLL PKTLFP F    KN+ +TF+ FHK R 
Sbjct: 1   MLYSLI-----SPSQSSTFPFHFHSLNSINLLLPKTLFPGFPSHPKNALRTFLHFHKTRS 60

Query: 61  SKSRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRVGLAGSQSNPLVSDLEFS----- 120
           +KS SN  NS     ASLIEAPILWAGR+CIFYALLR GLAGSQSNPL+SDL+ S     
Sbjct: 61  NKSLSNTFNSPSSTRASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLISDLDLSYGGSS 120

Query: 121 DGEIISDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLK 180
           DGE  SDLGFSKWLE VRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLK
Sbjct: 121 DGESSSDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLK 180

Query: 181 AIASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAG 240
           AIASLLSDDDHF+DATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHL VEITPFPAG
Sbjct: 181 AIASLLSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAG 240

Query: 241 PLNQKDYTKAEKLERVLRSGPSV 257
           PLN+ DYTKAEKLERVLRSGPSV
Sbjct: 241 PLNENDYTKAEKLERVLRSGPSV 258

[Close]

BLAST of Cp4.1LG04g11780 vs. NCBI nr
Match: gi|449462577|ref|XP_004149017.1| (PREDICTED: uncharacterized protein LOC101215704 [Cucumis sativus])

HSP 1 Score: 398.7 bits (1023), Expect = 7.9e-108
Identity = 206/263 (78.33%), Postives = 221/263 (84.03%), Query Frame = 1


Query: 1   MLHSLVQTTLPSPYQFTSFRFNLHNFDSINLL-PKTLFPDFGRESKNSFKTFIIFHK-RF 60
           MLHSL+     SP Q ++F F+ H+ +SINLL PK+LFP F    KN+  TF+ FHK R 
Sbjct: 1   MLHSLI-----SPSQSSTFPFHFHSLNSINLLLPKSLFPGFPSHPKNALTTFLHFHKTRS 60

Query: 61  SKSRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRVGLAGSQSNPLVSDLEFS----- 120
           +KS SN  NS     ASLIEAPILWAGR+CIFYALLR GLAGSQSNPL+SDL+ S     
Sbjct: 61  NKSLSNTFNSPSSTRASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLISDLDLSYGGSS 120

Query: 121 DGEIISDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLK 180
           DGE  SDLGFSKWLE VRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLK
Sbjct: 121 DGESSSDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLK 180

Query: 181 AIASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAG 240
           AI SLLSDDDHF+DATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHL VEITPFPAG
Sbjct: 181 AIMSLLSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAG 240

Query: 241 PLNQKDYTKAEKLERVLRSGPSV 257
           PLN+ DYTKAEKLERVLRSGPSV
Sbjct: 241 PLNENDYTKAEKLERVLRSGPSV 258

[Close]

BLAST of Cp4.1LG04g11780 vs. NCBI nr
Match: gi|645224626|ref|XP_008219201.1| (PREDICTED: uncharacterized protein LOC103319436 [Prunus mume])

HSP 1 Score: 353.6 bits (906), Expect = 2.9e-94
Identity = 189/264 (71.59%), Postives = 212/264 (80.30%), Query Frame = 1


Query: 1   MLHSLVQTTLPS-PYQFTSFRFNLHNFDSINLLPKTLFPDFGRESKNSFKTFIIFHKR-- 60
           ML SLVQTTL S P+Q  SF+  LH      +LPKTLF   G E  N+ K  + F +R  
Sbjct: 1   MLLSLVQTTLTSSPFQSPSFKI-LH---PTTVLPKTLFLGLGIEPTNALKRLLFFSQRSH 60

Query: 61  FSKSRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRVGLAGSQSNPLVSDL---EFSD 120
           ++KSR+ RL      HASL+EAP+LWAGR+CIFYALL+ GLAGSQ+NPLVSDL   E  D
Sbjct: 61  YTKSRNPRLT----IHASLLEAPVLWAGRLCIFYALLKTGLAGSQANPLVSDLGSTEEGD 120

Query: 121 GEII--SDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLL 180
           G  I  +DLGFS+WL  ++GKPV EA D+RKLVSKWHPTTKGTLRRNYRVPSKSEGRR L
Sbjct: 121 GVGIESADLGFSRWLNSIQGKPVKEAADRRKLVSKWHPTTKGTLRRNYRVPSKSEGRRAL 180

Query: 181 KAIASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPA 240
           KAIASLLS+DDHF+DATSHKGCQIRRESAHGE+VCCNNVRALFDELPTPHL VEITPFPA
Sbjct: 181 KAIASLLSEDDHFVDATSHKGCQIRRESAHGETVCCNNVRALFDELPTPHLVVEITPFPA 240

Query: 241 GPLNQKDYTKAEKLERVLRSGPSV 257
           G L + DYTKAEKLERVLRSGPSV
Sbjct: 241 GSLTETDYTKAEKLERVLRSGPSV 256

[Close]

BLAST of Cp4.1LG04g11780 vs. NCBI nr
Match: gi|596200176|ref|XP_007223684.1| (hypothetical protein PRUPE_ppa010280mg [Prunus persica])

HSP 1 Score: 353.6 bits (906), Expect = 2.9e-94
Identity = 189/264 (71.59%), Postives = 212/264 (80.30%), Query Frame = 1


Query: 1   MLHSLVQTTLPS-PYQFTSFRFNLHNFDSINLLPKTLFPDFGRESKNSFKTFIIFHKR-- 60
           ML SLVQTTL S P+Q  SF+  LH      +LPKTLF   G E  N+ K  + F +R  
Sbjct: 1   MLLSLVQTTLTSSPFQSPSFKI-LH---PATVLPKTLFLGLGIEPTNALKRLLFFSQRSH 60

Query: 61  FSKSRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRVGLAGSQSNPLVSDL---EFSD 120
           ++KSR+ RL      HASL+EAP+LWAGR+CIFYALL+ GLAGSQ+NPLVSDL   E  D
Sbjct: 61  YTKSRNPRLT----IHASLLEAPVLWAGRLCIFYALLKTGLAGSQANPLVSDLGSTEEGD 120

Query: 121 GEII--SDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLL 180
           G  I  +DLGFS+WL  ++GKPV EA D+RKLVSKWHPTTKGTLRRNYRVPSKSEGRR L
Sbjct: 121 GVGIESADLGFSRWLNSIQGKPVKEAADRRKLVSKWHPTTKGTLRRNYRVPSKSEGRRAL 180

Query: 181 KAIASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPA 240
           KAIASLLS+DDHF+DATSHKGCQIRRESAHGE+VCCNNVRALFDELPTPHL VEITPFPA
Sbjct: 181 KAIASLLSEDDHFVDATSHKGCQIRRESAHGETVCCNNVRALFDELPTPHLVVEITPFPA 240

Query: 241 GPLNQKDYTKAEKLERVLRSGPSV 257
           G L + DYTKAEKLERVLRSGPSV
Sbjct: 241 GSLTETDYTKAEKLERVLRSGPSV 256

[Close]

BLAST of Cp4.1LG04g11780 vs. NCBI nr
Match: gi|470117671|ref|XP_004294976.1| (PREDICTED: uncharacterized protein LOC101298104 [Fragaria vesca subsp. vesca])

HSP 1 Score: 344.7 bits (883), Expect = 1.3e-91
Identity = 184/265 (69.43%), Postives = 213/265 (80.38%), Query Frame = 1


Query: 1   MLHSLVQTTLPS-PYQFTSFR-FNLHNFDSINLLPKTLFPDFG-RESKNSFKTFIIFHK- 60
           ML SLVQTT  S P+Q TS   F   +  + + LPKTLF  F  + + N+ ++F++F K 
Sbjct: 1   MLLSLVQTTTTSSPFQSTSSSTFKTLSPTTTSNLPKTLFLGFPIQPTTNALQSFLLFTKI 60

Query: 61  -RFSKSRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRVGLAGSQSNPLVSDLEFSDG 120
             F K RS  +N      ASLIEAP+LWAGR+CIFYALL++GLAGSQ+NPLVSDL  S+G
Sbjct: 61  SHFGKPRSLSIN------ASLIEAPVLWAGRLCIFYALLKIGLAGSQANPLVSDLCESEG 120

Query: 121 EIIS----DLGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRL 180
             +     DLGFSKWL  ++GKPV +A D+RKLVSKWHPTTKGTLRRNYRVPSKSEGRR+
Sbjct: 121 GGVGVETDDLGFSKWLNSIQGKPVKDAADRRKLVSKWHPTTKGTLRRNYRVPSKSEGRRV 180

Query: 181 LKAIASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFP 240
           LKAIASLLSDDDHFIDA+SHKGCQIRRE+AHGESVCCNNVRALFDELPTPHL VEITPFP
Sbjct: 181 LKAIASLLSDDDHFIDASSHKGCQIRRETAHGESVCCNNVRALFDELPTPHLVVEITPFP 240

Query: 241 AGPLNQKDYTKAEKLERVLRSGPSV 257
           AG L +KDYTKAEKLE+VLRSGPS+
Sbjct: 241 AGSLTEKDYTKAEKLEKVLRSGPSI 259

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g11780 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG04g11780 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LX12_CUCSA	5.5e-108	78.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G604060 PE=4 SV=1	[more]
M5XTH2_PRUPE	2.0e-94	71.59	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010280mg PE=4 SV=1	[more]
A9PIB4_POPTR	3.9e-90	68.08	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s21420g PE=2 SV=1	[more]
B9SY01_RICCO	4.4e-89	66.79	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1455560 PE=4 SV=1	[more]
A0A061GT71_THECC	1.1e-87	69.50	6,7-dimethyl-8-ribityllumazine synthase OS=Theobroma cacao GN=TCM_040239 PE=4 SV...	[more]

BLAST of Cp4.1LG04g11780 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G32930.1	7.1e-83	61.83	unknown protein	[more]

BLAST of Cp4.1LG04g11780 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659100443\|ref\|XP_008451102.1\|	1.6e-108	78.71	PREDICTED: uncharacterized protein LOC103492482 [Cucumis melo]	[more]
gi\|449462577\|ref\|XP_004149017.1\|	7.9e-108	78.33	PREDICTED: uncharacterized protein LOC101215704 [Cucumis sativus]	[more]
gi\|645224626\|ref\|XP_008219201.1\|	2.9e-94	71.59	PREDICTED: uncharacterized protein LOC103319436 [Prunus mume]	[more]
gi\|596200176\|ref\|XP_007223684.1\|	2.9e-94	71.59	hypothetical protein PRUPE_ppa010280mg [Prunus persica]	[more]
gi\|470117671\|ref\|XP_004294976.1\|	1.3e-91	69.43	PREDICTED: uncharacterized protein LOC101298104 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g11780.1	Cp4.1LG04g11780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37229	FAMILY NOT NAMED	coord: 11..256 score: 5.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG04g11780	Cucsa.142870	Cucumber (Gy14) v1	cgycpeB0385
Cp4.1LG04g11780	CmaCh11G008170	Cucurbita maxima (Rimu)	cmacpeB153
Cp4.1LG04g11780	CmoCh10G010190	Cucurbita moschata (Rifu)	cmocpeB062
Cp4.1LG04g11780	CmoCh11G008220	Cucurbita moschata (Rifu)	cmocpeB129
Cp4.1LG04g11780	Cla004756	Watermelon (97103) v1	cpewmB642
Cp4.1LG04g11780	Csa1G604060	Cucumber (Chinese Long) v2	cpecuB652
Cp4.1LG04g11780	MELO3C015648	Melon (DHL92) v3.5.1	cpemeB620
Cp4.1LG04g11780	ClCG03G013990	Watermelon (Charleston Gray)	cpewcgB599
Cp4.1LG04g11780	CSPI01G29770	Wild cucumber (PI 183967)	cpecpiB655
Cp4.1LG04g11780	Lsi06G004540	Bottle gourd (USVL1VR-Ls)	cpelsiB563
Cp4.1LG04g11780	MELO3C015648.2	Melon (DHL92) v3.6.1	cpemedB733
Cp4.1LG04g11780	CsaV3_1G042230	Cucumber (Chinese Long) v3	cpecucB0813
Cp4.1LG04g11780	Bhi02G001426	Wax gourd	cpewgoB0901
Cp4.1LG04g11780	CsGy1G029120	Cucumber (Gy14) v2	cgybcpeB125
Cp4.1LG04g11780	Carg16968	Silver-seed gourd	carcpeB0656
Cp4.1LG04g11780	Carg18005	Silver-seed gourd	carcpeB0248

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG04g11780	Cp4.1LG18g01350	Cucurbita pepo (Zucchini)	cpecpeB363

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG04g11780	Wax gourd	cpewgoB0882
Cp4.1LG04g11780	Cucurbita maxima (Rimu)	cmacpeB086