ClCG03G013990 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTCCTCAGTCTCCAACTCAAGAATGCTTCCCTCTCTCATTTCCCCTTACCAATCCACCCTTTTCCCCTTCCACTTTCACTCTCTCCATTCCATCAATCTTCTTCTTCCCAAAACCCTTTTCCCTGATTTTCCATCTCAAGCCAAAAATACCCTCAAAACCTTCCTCCATTTCCACAAAACAAGATCCAACAAATCCTTCTACAACACCTTCAATTCCCCTTCCTCCACTCACGCTTCTCTCATCGAGGCTCCTATTTTGTGGGCTGGTAGACTTTGCATCTTCTATGCCCTTCTAAGAGCTGGTCTTGCTGGATCTCAATCTAACCCACTTGTCTCTGGTTTGTCTTCTTTCTGATTTTCTTTCCTTTTCAATGTTTTTTTTTCTTTTCTGATTCTGGGTTCTGGTTTTTATCGGGAAATTTTGTGTTTGTGCTTTTTTTGTTCTTCCTTTCCAGATTTGGACTTATCCTACGGTGGTAATGCTGATGGGGAAAGCAGCAGTGATTTGGGGTTTTCTAAGTGGTTGGAGAGTGTAAGAGGAAAGCCAGGTTTGTGGACGATCTTAAACTTGCTTGATTTGTGGGTTATGCAGTTGGATTTTGTGAACATACTAATCTGTTTTGCCAATATCATTAACTGCAAAGAGTGCATTGATCAACATTGCCTTTTGTTTTGATTTTAAATTGAAAAAAGGGACTAAATTCTACAAATTATATGGCTGAAACTCCAATAATCAATAGCTATATAGTTGACATTGAATGACTTCTTTTGTTGGATAGGGTACAAAAGATTAATAGAAAACGTTTTAGCAGTTAAGTTATGATTGTATAACATTGCTGGAAGTAATTGTTTAGTCCGATGTTATCCAGATTTTAGTGGGTTTAGTCTTGTATTTCTTGTATTATATTAGCAAGTTCGAGTTTTATGTTGATGTAATCACCTTTTGGTGTTTGGGGTTCACCCTTGCTTTCAGTTATCAATGAAATTGTTTCTTTTACCAAAGAAAAAGTTTGAGTTTTATGCTTTGTTTCCTCTTTTGTACTTCGAGCATTAGTCTCATTTTATTAATTCAATGGAAATCTTGATTGCTAATACTTTTGGACTTTGTTAAGCCTTTCTTCTGTTGAATCTTGAATGCTTGGGCTGGAAGATAAATTTTGCAACTCTATTTAATGGGGATCTCTTGTGTAGAGTTTCCCTTTTGTAATATATTTGTATCCTATAAAAGAAAAAGTCTTGAATGCTAGGCCTGGCAGATCATCTATAATTCTTAATGATCTTTGTGAATGTTCTATAGTTGTTCCATGTTTACATTCTTGCAGCTGCGATTTGAACCCTGCTTACAATATTATGTTTAATTTGATTCTAGACTTTACTATGCTAATTTGCTGGTATTCTTTGATTCTGTTCTTTGCACCTTATAGTAGCCCTGTTGAATTGAATAATATAGCTAGATTATAGTTTTGTATGTGAAACTAAAGGAATTTATTCATGATCTTCAAACAGAACTAAAACCTTTTCAGTATTTTCTTTCCTCAACATCTGGAATTGGCAGTGTATGAATGTTCTACTTGTGTTTGTTGACAGTGGATGAAGCAGTTGACAAAAGGAAACTAGTGAGCAAATGGCATCCTACCACAAAGGGAACCCTCAGAAGGAACTATCGGGTGCCTTCAAAATCCGAAGGACGACGTCTTCTTAAAGCCATCGCATCCCTCCTCTCCGACGATGATCACTTCGTTGATGCCACATCCCACAAGGTTCTAAATCTAATAACAATCCTAGAATTCATTCCTTCATTTCCATTTCATATCATGCCACATCCCACAAGGTTCTAAATCTAATAACAATCCTAGAATTCATTCCTTCATTTCCATTTCATATCATGCCTGGTATCCATCCTGTTCACTCTTCACACACGAAAACCCTTCCTTTCTTGTTCCACTTCATGATTATTCTCGAAGGACATCACGACGTAGAGGTTTGCCATTTGTAGGGCTGTCAAATCAGGAGGGAAAGTGCTCATGGGGAGAGTGTTTGTTGCAACAATGTGAGAGCTTTGTTTGATGAGCTTCCAACCCCACATCTTATTGTGGAAATAACTCCATTCCCTGCTGGGCCTCTCAATGAAAATGATTACACAAAGGCTGAGAAACTAGAGAGAGTGCTCAGATCTGGTCCTTCTGTTTGAGATTATTTCTAAATCTCTATGTATTATTATATCTCAACTTCTCTGTACAGTGTTGGAAAGTTGAAACTAATCAATCTTGAATCTTGATAGGGACGTCTCTTTTAGAAGAATGTTTCAGTGTGAAACGTTTCTTAGAGATATTTAACAAAATTTCTAGCAGTTG ATTTCCTCAGTCTCCAACTCAAGAATGCTTCCCTCTCTCATTTCCCCTTACCAATCCACCCTTTTCCCCTTCCACTTTCACTCTCTCCATTCCATCAATCTTCTTCTTCCCAAAACCCTTTTCCCTGATTTTCCATCTCAAGCCAAAAATACCCTCAAAACCTTCCTCCATTTCCACAAAACAAGATCCAACAAATCCTTCTACAACACCTTCAATTCCCCTTCCTCCACTCACGCTTCTCTCATCGAGGCTCCTATTTTGTGGGCTGGTAGACTTTGCATCTTCTATGCCCTTCTAAGAGCTGGTCTTGCTGGATCTCAATCTAACCCACTTGTCTCTGATTTGGACTTATCCTACGGTGGTAATGCTGATGGGGAAAGCAGCAGTGATTTGGGGTTTTCTAAGTGGTTGGAGAGTGTAAGAGGAAAGCCAGTGGATGAAGCAGTTGACAAAAGGAAACTAGTGAGCAAATGGCATCCTACCACAAAGGGAACCCTCAGAAGGAACTATCGGGTGCCTTCAAAATCCGAAGGACGACGTCTTCTTAAAGCCATCGCATCCCTCCTCTCCGACGATGATCACTTCGTTGATGCCACATCCCACAAGGGCTGTCAAATCAGGAGGGAAAGTGCTCATGGGGAGAGTGTTTGTTGCAACAATGTGAGAGCTTTGTTTGATGAGCTTCCAACCCCACATCTTATTGTGGAAATAACTCCATTCCCTGCTGGGCCTCTCAATGAAAATGATTACACAAAGGCTGAGAAACTAGAGAGAGTGCTCAGATCTGGTCCTTCTGTTTGAGATTATTTCTAAATCTCTATGTATTATTATATCTCAACTTCTCTGTACAGTGTTGGAAAGTTGAAACTAATCAATCTTGAATCTTGATAGGGACGTCTCTTTTAGAAGAATGTTTCAGTGTGAAACGTTTCTTAGAGATATTTAACAAAATTTCTAGCAGTTG ATGCTTCCCTCTCTCATTTCCCCTTACCAATCCACCCTTTTCCCCTTCCACTTTCACTCTCTCCATTCCATCAATCTTCTTCTTCCCAAAACCCTTTTCCCTGATTTTCCATCTCAAGCCAAAAATACCCTCAAAACCTTCCTCCATTTCCACAAAACAAGATCCAACAAATCCTTCTACAACACCTTCAATTCCCCTTCCTCCACTCACGCTTCTCTCATCGAGGCTCCTATTTTGTGGGCTGGTAGACTTTGCATCTTCTATGCCCTTCTAAGAGCTGGTCTTGCTGGATCTCAATCTAACCCACTTGTCTCTGATTTGGACTTATCCTACGGTGGTAATGCTGATGGGGAAAGCAGCAGTGATTTGGGGTTTTCTAAGTGGTTGGAGAGTGTAAGAGGAAAGCCAGTGGATGAAGCAGTTGACAAAAGGAAACTAGTGAGCAAATGGCATCCTACCACAAAGGGAACCCTCAGAAGGAACTATCGGGTGCCTTCAAAATCCGAAGGACGACGTCTTCTTAAAGCCATCGCATCCCTCCTCTCCGACGATGATCACTTCGTTGATGCCACATCCCACAAGGGCTGTCAAATCAGGAGGGAAAGTGCTCATGGGGAGAGTGTTTGTTGCAACAATGTGAGAGCTTTGTTTGATGAGCTTCCAACCCCACATCTTATTGTGGAAATAACTCCATTCCCTGCTGGGCCTCTCAATGAAAATGATTACACAAAGGCTGAGAAACTAGAGAGAGTGCTCAGATCTGGTCCTTCTGTTTGA MLPSLISPYQSTLFPFHFHSLHSINLLLPKTLFPDFPSQAKNTLKTFLHFHKTRSNKSFYNTFNSPSSTHASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLVSDLDLSYGGNADGESSSDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNENDYTKAEKLERVLRSGPSV
BLAST of ClCG03G013990 vs. TrEMBL
Match: A0A0A0LX12_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G604060 PE=4 SV=1) HSP 1 Score: 487.6 bits (1254), Expect = 9.0e-135 Identity = 240/258 (93.02%), Postives = 246/258 (95.35%), Query Frame = 1
BLAST of ClCG03G013990 vs. TrEMBL
Match: M5XTH2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010280mg PE=4 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 1.0e-93 Identity = 182/253 (71.94%), Postives = 201/253 (79.45%), Query Frame = 1
BLAST of ClCG03G013990 vs. TrEMBL
Match: A9PIB4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s21420g PE=2 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 8.0e-91 Identity = 180/263 (68.44%), Postives = 205/263 (77.95%), Query Frame = 1
BLAST of ClCG03G013990 vs. TrEMBL
Match: B9SY01_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1455560 PE=4 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 1.8e-90 Identity = 180/267 (67.42%), Postives = 210/267 (78.65%), Query Frame = 1
BLAST of ClCG03G013990 vs. TrEMBL
Match: A0A067FIF4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025764mg PE=4 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 1.2e-89 Identity = 173/249 (69.48%), Postives = 194/249 (77.91%), Query Frame = 1
BLAST of ClCG03G013990 vs. TAIR10
Match: AT3G32930.1 (AT3G32930.1 unknown protein) HSP 1 Score: 317.8 bits (813), Expect = 6.3e-87 Identity = 160/234 (68.38%), Postives = 185/234 (79.06%), Query Frame = 1
BLAST of ClCG03G013990 vs. NCBI nr
Match: gi|659100443|ref|XP_008451102.1| (PREDICTED: uncharacterized protein LOC103492482 [Cucumis melo]) HSP 1 Score: 491.9 bits (1265), Expect = 6.9e-136 Identity = 242/258 (93.80%), Postives = 248/258 (96.12%), Query Frame = 1
BLAST of ClCG03G013990 vs. NCBI nr
Match: gi|449462577|ref|XP_004149017.1| (PREDICTED: uncharacterized protein LOC101215704 [Cucumis sativus]) HSP 1 Score: 487.6 bits (1254), Expect = 1.3e-134 Identity = 240/258 (93.02%), Postives = 246/258 (95.35%), Query Frame = 1
BLAST of ClCG03G013990 vs. NCBI nr
Match: gi|1009123923|ref|XP_015878799.1| (PREDICTED: uncharacterized protein LOC107415047 [Ziziphus jujuba]) HSP 1 Score: 352.1 bits (902), Expect = 8.5e-94 Identity = 186/261 (71.26%), Postives = 205/261 (78.54%), Query Frame = 1
BLAST of ClCG03G013990 vs. NCBI nr
Match: gi|645224626|ref|XP_008219201.1| (PREDICTED: uncharacterized protein LOC103319436 [Prunus mume]) HSP 1 Score: 351.3 bits (900), Expect = 1.5e-93 Identity = 182/253 (71.94%), Postives = 201/253 (79.45%), Query Frame = 1
BLAST of ClCG03G013990 vs. NCBI nr
Match: gi|596200176|ref|XP_007223684.1| (hypothetical protein PRUPE_ppa010280mg [Prunus persica]) HSP 1 Score: 351.3 bits (900), Expect = 1.5e-93 Identity = 182/253 (71.94%), Postives = 201/253 (79.45%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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