Carg18005 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg18005
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	6,7-dimethyl-8-ribityllumazine synthase
Location	Cucurbita_argyrosperma_scaffold_171 : 334983 .. 337804 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAAACTGATAAGGAATAGAATATTTACAAAAAGTCTAAACGACGTCGTTTTAGGGCTAAAGAGCTTCACAGTCTCGTCTCTCTCGCGCTCTGCGTTGATTACGGTTTCTTCAGCCTGCAACTCAAGAATGCTTCACTCTCTCGTTCAAACTACTCTCCCTTCGCCTTACCAATTCACCTCCTTCCGCTTCAACTTACACAATTTCGATTCGATCAATCTTCTTCCCAAAGCCTTTTTCCCTGATTTTGGACGCGAATCCAAAAATTCCTTCAAAACATTCATCATTTTCCACAAAAGATTCAGTAAATCCCGCTCCAACAGGCTCAATTCGTCGATCGTCGCTCACGCTTCTTTAATCGAGGCGCCGATTTTGTGGGCTGGTAGAGTTTGCATCTTCTATGCCCTTCTTAGAGCTGGTTTGGCTGGATCTCAATCTAATCCACTTGTTTCAGGTTGTGTTCTTCATCTGGGTTTCTTCATTTCTAGGCTGTTGAATGTTTTTTTGGTGTTTTCCCCTTTTTTGATTGTGGGTTCTTGTTTTTATTGGGAAATCTTGTGTTTGTGATTGTTTTTCTTCTCCAGATTTGGAATTCTCCGATGGGGAAAGTATCAGTGATTTGGGGTTTTCTAAGTGGTTGGAAGTTGTAAGAGGAAAGCCAGGTTTGTGGGACTTAAGCTCTCTTGCTCATTGATTGATCTATGAACTTATGAACACACTAAATTCAGCTGAACTTGTTATGTCAATATCATGAACTGAAGAATTCGATCACTTCTACATTGAATGTTAGGCTGGAAGCTATGCTTTGTAACTCTAATTGATAGGACGTTCTTGTTTATCGTTTCCTTTTTGTAATATCTCATTATATGAATGTGATATCTATATCCTACTAAAAAGAGTGTCTGGAATGCTAGGCTTGTAGCCCATCTACAATTCTAAATGATCCTTGTGTGCAATGTTTTTGAGTTGAAATGTTCATTGCAGTTTTAAGCTGCTACTACATTTCAATCCTGCTTTTAATAATGTGTTTGATCTTATATCCTAGAGTTTGGAATGGTCATTCATGTTCGTGGTTGATGTACAATATCTAATATCCATTGGATGTAAACTAAACTTGTTATGTCAATTATCAACGAAAGGGTCATATCATTATGGGACTTTGTGATGTTGCACCATTTTCTCTGTTAAATGACACTAGAGCTAGAAATATGGCGGTAAGAGCCTAGACCCACGATATTGTCCTCTTTGAGTTTTCCCGTTTGGGCTTTCCTTCAAGGTTTTTAAGACATGTATGCTAGGAAGAGGTTTCCACACCCTTATAATGAATGCTTTGTTCTCCTCTTCAACCAATGTGGGATCTCACAATCCACCCCCTTTCGGGGCTTGGCGTCCTCATTGGCTCACCACCTGGTGTCTGGCTCTGAGACCTTTTTTTGATTTGTGTGTGTCATCCTTATGTAGGGTCATGCTAATCTTCTCTGTATCGTTTCAATTTTATTGGATGTCCCCTTTATTGTGAGATTCATCATTGGTTGAAGAGGGGAACGAAACATTCACTATAAGGGTTTGGAAACCTCTTCCTAGCAAACGTGTTTTAAATACCTTGAGGGGAAGCTCGAAAGGAAAATCCCAAAGAGGACAATATTTGCTAGCGGTGGACTTAGGCGGTTACAAATAATATTAGAGCCAATCACTGGACGGTGCGAGAAACTGGTTGGAGTAGGGCTAGACCCTCTCCATAGTAGACACATTTTAAAACTTTGAGGGGAAGCTCAAAGTGGAAAGCCCAAAAAGGACAATATTTGCTAGCAGTGGGCTTCGGCTGTTACAAATGATATTAGAGCCAGTCACCGGACGGTGCAAGACATTGGTCGGAGTAGGGCTAAACTCTCTCCATAGTAAACGCGTTTTAAAAACCTTGAGGGAAAAATTAAAAGAGAAAGCCCAAAAAGGACAATATCTACTAGTACATTTCATCTAGAATTGTGAACGAACATTCTACTTTCTTGTTTTTATTGGCAGTGGATGAAGCAGTTGATAAAAGGAAACTAGTGAGTAAATGGCATCCTACCACAAAGGGTACCCTCAGAAGGAACTACCGAGTACCTTCGAAATCCGAAGGACGACGCCTTCTTAAAGCCATCGCATCCCTCCTTTCCGATGACGATCACTTCATCGACGCCACTTCCCACAAGGTTTTAAATCCATTCCTTCATTTCTATATATAATGCGATGTCTGGTATCTACACCGTTCACTCTTCACACACGCAAGCCATTTCCTTTTCATTTCGTTTCGTTTCATGATTCTCAAAGACATTACGACATAGGAGACGTCGTTTCGTTGTTATAAACATCGCTTGGTTTGTCATTGGTAGGGTTGTCAAATCAGGAGGGAAAGTGCTCATGGGGAGAGTGTTTGCTGCAACAATGTGAGAGCTTTGTTTGATGAGCTTCCAACTCCACATCTTACTGTGGAAATAACTCCATTCCCTGCTGGGCCTCTCAATCAAAAGGATTACACCAAAGCTGAGAAACTAGAGAGAGTGCTCAGATCTGGCCCTTCTGTTTGAGATACTGCTTTTACACCTCTCTGTATTTTATATCTCAACTTCTCTGTATAGCGTTTAAAGGAATCAATCTCGACCGGGACATCGTTTTAGACATTATATGAGCGGTTTCTATTTGACTTAAAATTCATTGTCATAAAGATCAAAAGAAAAAGAGTATTTCTGAGATCCCGCATCGGTTGGAGAGGAGAACAAAACATCATTTATAAGAGTGTTGAAACCTCTCCCTAGCTTGAAGGGAAGCCCGAAAGG

mRNA sequence

ATGGATAAACTGATAAGGAATAGAATATTTACAAAAAGTCTAAACGACGTCGTTTTAGGGCTAAAGAGCTTCACAGTCTCGTCTCTCTCGCGCTCTGCGTTGATTACGGTTTCTTCAGCCTGCAACTCAAGAATGCTTCACTCTCTCGTTCAAACTACTCTCCCTTCGCCTTACCAATTCACCTCCTTCCGCTTCAACTTACACAATTTCGATTCGATCAATCTTCTTCCCAAAGCCTTTTTCCCTGATTTTGGACGCGAATCCAAAAATTCCTTCAAAACATTCATCATTTTCCACAAAAGATTCAGTAAATCCCGCTCCAACAGGCTCAATTCGTCGATCGTCGCTCACGCTTCTTTAATCGAGGCGCCGATTTTGTGGGCTGGTAGAGTTTGCATCTTCTATGCCCTTCTTAGAGCTGGTTTGGCTGGATCTCAATCTAATCCACTTGTTTCAGATTTGGAATTCTCCGATGGGGAAAGTATCAGTGATTTGGGGTTTTCTAAGTGGTTGGAAGTTGTAAGAGGAAAGCCAGTGGATGAAGCAGTTGATAAAAGGAAACTAGTGAGTAAATGGCATCCTACCACAAAGGGTACCCTCAGAAGGAACTACCGAGTACCTTCGAAATCCGAAGGACGACGCCTTCTTAAAGCCATCGCATCCCTCCTTTCCGATGACGATCACTTCATCGACGCCACTTCCCACAAGGGTTGTCAAATCAGGAGGGAAAGTGCTCATGGGGAGAGTGTTTGCTGCAACAATGTGAGAGCTTTGTTTGATGAGCTTCCAACTCCACATCTTACTGTGGAAATAACTCCATTCCCTGCTGGGCCTCTCAATCAAAAGGATTACACCAAAGCTGAGAAACTAGAGAGAGTGCTCAGATCTGGCCCTTCTGTTTGAGATACTGCTTTTACACCTCTCTGTATTTTATATCTCAACTTCTCTGTATAGCGTTTAAAGGAATCAATCTCGACCGGGACATCGTTTTAGACATTATATGAGCGGTTTCTATTTGACTTAAAATTCATTGTCATAAAGATCAAAAGAAAAAGAGTATTTCTGAGATCCCGCATCGGTTGGAGAGGAGAACAAAACATCATTTATAAGAGTGTTGAAACCTCTCCCTAGCTTGAAGGGAAGCCCGAAAGG

Coding sequence (CDS)

ATGGATAAACTGATAAGGAATAGAATATTTACAAAAAGTCTAAACGACGTCGTTTTAGGGCTAAAGAGCTTCACAGTCTCGTCTCTCTCGCGCTCTGCGTTGATTACGGTTTCTTCAGCCTGCAACTCAAGAATGCTTCACTCTCTCGTTCAAACTACTCTCCCTTCGCCTTACCAATTCACCTCCTTCCGCTTCAACTTACACAATTTCGATTCGATCAATCTTCTTCCCAAAGCCTTTTTCCCTGATTTTGGACGCGAATCCAAAAATTCCTTCAAAACATTCATCATTTTCCACAAAAGATTCAGTAAATCCCGCTCCAACAGGCTCAATTCGTCGATCGTCGCTCACGCTTCTTTAATCGAGGCGCCGATTTTGTGGGCTGGTAGAGTTTGCATCTTCTATGCCCTTCTTAGAGCTGGTTTGGCTGGATCTCAATCTAATCCACTTGTTTCAGATTTGGAATTCTCCGATGGGGAAAGTATCAGTGATTTGGGGTTTTCTAAGTGGTTGGAAGTTGTAAGAGGAAAGCCAGTGGATGAAGCAGTTGATAAAAGGAAACTAGTGAGTAAATGGCATCCTACCACAAAGGGTACCCTCAGAAGGAACTACCGAGTACCTTCGAAATCCGAAGGACGACGCCTTCTTAAAGCCATCGCATCCCTCCTTTCCGATGACGATCACTTCATCGACGCCACTTCCCACAAGGGTTGTCAAATCAGGAGGGAAAGTGCTCATGGGGAGAGTGTTTGCTGCAACAATGTGAGAGCTTTGTTTGATGAGCTTCCAACTCCACATCTTACTGTGGAAATAACTCCATTCCCTGCTGGGCCTCTCAATCAAAAGGATTACACCAAAGCTGAGAAACTAGAGAGAGTGCTCAGATCTGGCCCTTCTGTTTGA

Protein sequence

MDKLIRNRIFTKSLNDVVLGLKSFTVSSLSRSALITVSSACNSRMLHSLVQTTLPSPYQFTSFRFNLHNFDSINLLPKAFFPDFGRESKNSFKTFIIFHKRFSKSRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDLEFSDGESISDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV

Homology

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BLAST of Carg18005 vs. NCBI nr
Match: XP_022927378.1 (uncharacterized protein LOC111434216 [Cucurbita moschata])

HSP 1 Score: 568.5 bits (1464), Expect = 1.3e-158
Identity = 291/300 (97.00%), Postives = 292/300 (97.33%), Query Frame = 0


Query: 1   MDKLIRNRIFTKSLNDVVLGLKSFTVSSLSRSALITVSSACNSRMLHSLVQTTLPSPYQF 60
           MDKLIRNRIFTKSLN VVLGLKSFTVSSLSRSA ITVSSAC+SRMLHSLVQTTLPSPYQF
Sbjct: 1   MDKLIRNRIFTKSLNVVVLGLKSFTVSSLSRSASITVSSACSSRMLHSLVQTTLPSPYQF 60

Query: 61  TSFRFNLHNFDSINLLPKAFFPDFGRESKNSFKTFIIFHKRFSKSRSNRLNSSIVAHASL 120
           TSFRFNLHN DSINLLPKAFFPDFGRESKNS KTFIIF KRFSKSRSNRLNSSIVAHASL
Sbjct: 61  TSFRFNLHNIDSINLLPKAFFPDFGRESKNSSKTFIIFRKRFSKSRSNRLNSSIVAHASL 120

Query: 121 IEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDLEFSDGESISDLGFSKWLEVVRGKPVD 180
           IEAPILWAGRVCIFYALLRAGLAGSQSNPL SDLEFSDGESISDLGFSKWLEVVRGKPVD
Sbjct: 121 IEAPILWAGRVCIFYALLRAGLAGSQSNPLFSDLEFSDGESISDLGFSKWLEVVRGKPVD 180

Query: 181 EAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQI 240
           EAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLL AIASLLSDDDHFIDATSHKGCQI
Sbjct: 181 EAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLIAIASLLSDDDHFIDATSHKGCQI 240

Query: 241 RRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV 300
           RRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDYTKAEKLERVLRS PSV
Sbjct: 241 RRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDYTKAEKLERVLRSCPSV 300

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BLAST of Carg18005 vs. NCBI nr
Match: XP_023531897.1 (uncharacterized protein LOC111794024 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 509.6 bits (1311), Expect = 7.2e-141
Identity = 252/256 (98.44%), Postives = 252/256 (98.44%), Query Frame = 0


Query: 45  MLHSLVQTTLPSPYQFTSFRFNLHNFDSINLLPKAFFPDFGRESKNSFKTFIIFHKRFSK 104
           MLHSLVQTTLPSPYQFTSFRFNLHNFDSINLLPK  FPDFGRESKNSFKTFIIFHKRFSK
Sbjct: 1   MLHSLVQTTLPSPYQFTSFRFNLHNFDSINLLPKTLFPDFGRESKNSFKTFIIFHKRFSK 60

Query: 105 SRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDLEFSDGESISD 164
           SRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLR GLAGSQSNPLVSDLEFSDGE ISD
Sbjct: 61  SRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRVGLAGSQSNPLVSDLEFSDGEIISD 120

Query: 165 LGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLS 224
           LGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLS
Sbjct: 121 LGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLS 180

Query: 225 DDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDY 284
           DDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDY
Sbjct: 181 DDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDY 240

Query: 285 TKAEKLERVLRSGPSV 301
           TKAEKLERVLRSGPSV
Sbjct: 241 TKAEKLERVLRSGPSV 256

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BLAST of Carg18005 vs. NCBI nr
Match: XP_022967949.1 (uncharacterized protein LOC111467324 isoform X2 [Cucurbita maxima])

HSP 1 Score: 490.0 bits (1260), Expect = 5.9e-135
Identity = 242/256 (94.53%), Postives = 247/256 (96.48%), Query Frame = 0


Query: 45  MLHSLVQTTLPSPYQFTSFRFNLHNFDSINLLPKAFFPDFGRESKNSFKTFIIFHKRFSK 104
           MLHSLVQTTLPSP QFT FRFNL +  SINLLPK  FPDFGRE+KNSFKTFIIFHKRF+K
Sbjct: 1   MLHSLVQTTLPSPCQFTYFRFNLQSLHSINLLPKTLFPDFGREAKNSFKTFIIFHKRFNK 60

Query: 105 SRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDLEFSDGESISD 164
           SRSNRLNSSI+AHASLIEAPILWAGR+CIFYALLR GLAGSQSNPLVSDLEFSDGESISD
Sbjct: 61  SRSNRLNSSIIAHASLIEAPILWAGRLCIFYALLRVGLAGSQSNPLVSDLEFSDGESISD 120

Query: 165 LGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLS 224
           LGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLS
Sbjct: 121 LGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLS 180

Query: 225 DDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDY 284
           DDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHL VEITPFPAGPLNQKDY
Sbjct: 181 DDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDY 240

Query: 285 TKAEKLERVLRSGPSV 301
           TKAEKLERVLRSGPSV
Sbjct: 241 TKAEKLERVLRSGPSV 256

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BLAST of Carg18005 vs. NCBI nr
Match: XP_022967942.1 (uncharacterized protein LOC111467324 isoform X1 [Cucurbita maxima])

HSP 1 Score: 474.2 bits (1219), Expect = 3.4e-130
Identity = 242/286 (84.62%), Postives = 247/286 (86.36%), Query Frame = 0


Query: 45  MLHSLVQTTLPSPYQFTSFRFNLHNFDSINLLPKAFFPDFGRESKNSFKTFIIFHKRFSK 104
           MLHSLVQTTLPSP QFT FRFNL +  SINLLPK  FPDFGRE+KNSFKTFIIFHKRF+K
Sbjct: 1   MLHSLVQTTLPSPCQFTYFRFNLQSLHSINLLPKTLFPDFGREAKNSFKTFIIFHKRFNK 60

Query: 105 SRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRAGLAGSQSNPLVS------------ 164
           SRSNRLNSSI+AHASLIEAPILWAGR+CIFYALLR GLAGSQSNPLVS            
Sbjct: 61  SRSNRLNSSIIAHASLIEAPILWAGRLCIFYALLRVGLAGSQSNPLVSGCVLHLCFFISR 120

Query: 165 ------------------DLEFSDGESISDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHP 224
                             DLEFSDGESISDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHP
Sbjct: 121 LLNVFIGKSCVCDCFSSPDLEFSDGESISDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHP 180

Query: 225 TTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNN 284
           TTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNN
Sbjct: 181 TTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNN 240

Query: 285 VRALFDELPTPHLTVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV 301
           VRALFDELPTPHL VEITPFPAGPLNQKDYTKAEKLERVLRSGPSV
Sbjct: 241 VRALFDELPTPHLIVEITPFPAGPLNQKDYTKAEKLERVLRSGPSV 286

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BLAST of Carg18005 vs. NCBI nr
Match: XP_022157339.1 (uncharacterized protein LOC111024066 [Momordica charantia])

HSP 1 Score: 411.4 bits (1056), Expect = 2.7e-111
Identity = 207/261 (79.31%), Postives = 219/261 (83.91%), Query Frame = 0


Query: 45  MLHSLVQTTLPSPYQFTSFRFNLHNFDSINLLPKAFFPDFGRESKNSFKTFIIFHKRFSK 104
           ML S+V TT  SPYQ+T+F F+ H+  SINLLP+  FP FG E  N+ K F+ FH+   K
Sbjct: 1   MLLSIVHTTFTSPYQYTAFPFHFHSLHSINLLPRTLFPAFGTEPTNTLKAFLHFHQTSKK 60

Query: 105 SRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDLEFS-----DG 164
           S  +   S     ASLIEAPILWAGR+CIFYALLRAG AGSQSNPLVSDL+ S      G
Sbjct: 61  SHFSTFTSLTTTRASLIEAPILWAGRICIFYALLRAGFAGSQSNPLVSDLDVSYGGGAAG 120

Query: 165 ESISDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAI 224
           ES SDLGFSKWLE VRGKPVDEA DKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAI
Sbjct: 121 ESGSDLGFSKWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAI 180

Query: 225 ASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPL 284
           ASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHL VEITPFPAGPL
Sbjct: 181 ASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPL 240

Query: 285 NQKDYTKAEKLERVLRSGPSV 301
           NQKDYTKAEKLERVLRSGPSV
Sbjct: 241 NQKDYTKAEKLERVLRSGPSV 261

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BLAST of Carg18005 vs. TAIR10
Match: AT3G32930.1 (unknown protein)

HSP 1 Score: 303.9 bits (777), Expect = 1.1e-82
Identity = 163/262 (62.21%), Postives = 193/262 (73.66%), Query Frame = 0


Query: 48  SLVQTTLPSPYQFTSFRFNLHNFD-SINLLPKAFFPDFGRESKNSFKTFIIFHKRFSKSR 107
           SLVQ +  S ++  S    L N + S  LL K+ FP     SK +      + K+ S   
Sbjct: 4   SLVQVSSVSNFRSQSTIPTLSNSNPSCLLLQKSIFPG----SKLTLHRIFRYPKKISNGS 63

Query: 108 SNRLNSSIVAHASLIEAPILWAGRVCIFYALLRAGLAGSQSNPLVS-------DLEFSDG 167
           +          ASL+E PILWAGR+C+FYAL++AG AGS+SNP+VS       D+E+ DG
Sbjct: 64  T---------RASLLETPILWAGRICVFYALVKAGFAGSKSNPIVSGLDTGGVDVEYDDG 123

Query: 168 ESISDLGFSKWLEVVRG-KPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKA 227
              +DLGFSKWL+ ++G KP  +A DKRKLVSKWHPTTKGTLRRNYR+PSK+EG RLLKA
Sbjct: 124 ---ADLGFSKWLQNIKGNKPDKDAADKRKLVSKWHPTTKGTLRRNYRIPSKAEGNRLLKA 183

Query: 228 IASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGP 287
           IASLLSDDDHF DATSHKGCQIRRESAHG+SVCCNNVRALFDELPTPHL VEITPFPAGP
Sbjct: 184 IASLLSDDDHFRDATSHKGCQIRRESAHGQSVCCNNVRALFDELPTPHLVVEITPFPAGP 243

Query: 288 LNQKDYTKAEKLERVLRSGPSV 301
           L + DY KAEKLER+LRSG ++
Sbjct: 244 LTENDYLKAEKLERILRSGANI 249

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BLAST of Carg18005 vs. TrEMBL
Match: tr|A0A1S3BQQ9|A0A1S3BQQ9_CUCME (uncharacterized protein LOC103492482 OS=Cucumis melo OX=3656 GN=LOC103492482 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 4.1e-108
Identity = 207/263 (78.71%), Postives = 223/263 (84.79%), Query Frame = 0


Query: 45  MLHSLVQTTLPSPYQFTSFRFNLHNFDSIN-LLPKAFFPDFGRESKNSFKTFIIFHK-RF 104
           ML+SL+     SP Q ++F F+ H+ +SIN LLPK  FP F    KN+ +TF+ FHK R 
Sbjct: 1   MLYSLI-----SPSQSSTFPFHFHSLNSINLLLPKTLFPGFPSHPKNALRTFLHFHKTRS 60

Query: 105 SKSRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDLEF-----S 164
           +KS SN  NS     ASLIEAPILWAGR+CIFYALLRAGLAGSQSNPL+SDL+      S
Sbjct: 61  NKSLSNTFNSPSSTRASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLISDLDLSYGGSS 120

Query: 165 DGESISDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLK 224
           DGES SDLGFSKWLE VRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLK
Sbjct: 121 DGESSSDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLK 180

Query: 225 AIASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAG 284
           AIASLLSDDDHF+DATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHL VEITPFPAG
Sbjct: 181 AIASLLSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAG 240

Query: 285 PLNQKDYTKAEKLERVLRSGPSV 301
           PLN+ DYTKAEKLERVLRSGPSV
Sbjct: 241 PLNENDYTKAEKLERVLRSGPSV 258

[Close]

BLAST of Carg18005 vs. TrEMBL
Match: tr|A0A0A0LX12|A0A0A0LX12_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G604060 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 5.3e-108
Identity = 207/263 (78.71%), Postives = 222/263 (84.41%), Query Frame = 0


Query: 45  MLHSLVQTTLPSPYQFTSFRFNLHNFDSIN-LLPKAFFPDFGRESKNSFKTFIIFHK-RF 104
           MLHSL+     SP Q ++F F+ H+ +SIN LLPK+ FP F    KN+  TF+ FHK R 
Sbjct: 1   MLHSLI-----SPSQSSTFPFHFHSLNSINLLLPKSLFPGFPSHPKNALTTFLHFHKTRS 60

Query: 105 SKSRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDLEF-----S 164
           +KS SN  NS     ASLIEAPILWAGR+CIFYALLRAGLAGSQSNPL+SDL+      S
Sbjct: 61  NKSLSNTFNSPSSTRASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLISDLDLSYGGSS 120

Query: 165 DGESISDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLK 224
           DGES SDLGFSKWLE VRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLK
Sbjct: 121 DGESSSDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLK 180

Query: 225 AIASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAG 284
           AI SLLSDDDHF+DATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHL VEITPFPAG
Sbjct: 181 AIMSLLSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAG 240

Query: 285 PLNQKDYTKAEKLERVLRSGPSV 301
           PLN+ DYTKAEKLERVLRSGPSV
Sbjct: 241 PLNENDYTKAEKLERVLRSGPSV 258

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BLAST of Carg18005 vs. TrEMBL
Match: tr|M5XTH2|M5XTH2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G537200 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 4.8e-93
Identity = 187/264 (70.83%), Postives = 210/264 (79.55%), Query Frame = 0


Query: 45  MLHSLVQTTL-PSPYQFTSFRFNLHNFDSINLLPKAFFPDFGRESKNSFKTFIIFHKR-- 104
           ML SLVQTTL  SP+Q  SF+  LH      +LPK  F   G E  N+ K  + F +R  
Sbjct: 1   MLLSLVQTTLTSSPFQSPSFKI-LH---PATVLPKTLFLGLGIEPTNALKRLLFFSQRSH 60

Query: 105 FSKSRSNRLNSSIVAHASLIEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDL---EFSD 164
           ++KSR+ RL      HASL+EAP+LWAGR+CIFYALL+ GLAGSQ+NPLVSDL   E  D
Sbjct: 61  YTKSRNPRL----TIHASLLEAPVLWAGRLCIFYALLKTGLAGSQANPLVSDLGSTEEGD 120

Query: 165 GESI--SDLGFSKWLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLL 224
           G  I  +DLGFS+WL  ++GKPV EA D+RKLVSKWHPTTKGTLRRNYRVPSKSEGRR L
Sbjct: 121 GVGIESADLGFSRWLNSIQGKPVKEAADRRKLVSKWHPTTKGTLRRNYRVPSKSEGRRAL 180

Query: 225 KAIASLLSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPA 284
           KAIASLLS+DDHF+DATSHKGCQIRRESAHGE+VCCNNVRALFDELPTPHL VEITPFPA
Sbjct: 181 KAIASLLSEDDHFVDATSHKGCQIRRESAHGETVCCNNVRALFDELPTPHLVVEITPFPA 240

Query: 285 GPLNQKDYTKAEKLERVLRSGPSV 301
           G L + DYTKAEKLERVLRSGPSV
Sbjct: 241 GSLTETDYTKAEKLERVLRSGPSV 256

[Close]

BLAST of Carg18005 vs. TrEMBL
Match: tr|A0A2P5EZJ2|A0A2P5EZJ2_9ROSA (6,7-dimethyl-8-ribityllumazine synthase OS=Trema orientalis OX=63057 GN=TorRG33x02_133580 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.0e-91
Identity = 177/251 (70.52%), Postives = 202/251 (80.48%), Query Frame = 0


Query: 60  FTSFRFNLHNFDSINLLPKAFFPDFGRESKNSFKTFIIFHKRFSKS---RSNRLNSSI-- 119
           F+S  FN+ ++ +  LLPK  FP    E+ N  + F++   R S     R  R   S+  
Sbjct: 24  FSSNYFNIPSYST--LLPKTLFP----ETSNGLRAFLLHSSRRSHGSTLRGGRKPCSLTI 83

Query: 120 -VAHASLIEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDLEFSDGE----SISDLGFSK 179
               ASL+E+P++WAGRVCIFYALL+AGLAGSQ+NPLVSDLE SDG+      SD+GFSK
Sbjct: 84  STIQASLLESPVIWAGRVCIFYALLKAGLAGSQANPLVSDLERSDGDGGNGESSDMGFSK 143

Query: 180 WLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHF 239
           WL  ++GKPV EA D+RKLVSKWHPTTKGTL+RNYRVPSKSEGRRLLKAIASLLSDDDHF
Sbjct: 144 WLNSIQGKPVKEAADRRKLVSKWHPTTKGTLKRNYRVPSKSEGRRLLKAIASLLSDDDHF 203

Query: 240 IDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDYTKAEK 299
           +DATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHL VEITPFPAGPL +KDYTKAEK
Sbjct: 204 VDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLTEKDYTKAEK 263

Query: 300 LERVLRSGPSV 301
           LERVLR+GPSV
Sbjct: 264 LERVLRTGPSV 268

[Close]

BLAST of Carg18005 vs. TrEMBL
Match: tr|A0A2P5CVY1|A0A2P5CVY1_PARAD (6,7-dimethyl-8-ribityllumazine synthase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_118910 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.0e-90
Identity = 175/251 (69.72%), Postives = 202/251 (80.48%), Query Frame = 0


Query: 60  FTSFRFNLHNFDSINLLPKAFFPDFGRESKNSFKTFIIFHKRFSKS---RSNRLNSSI-- 119
           F+S  FN+ ++ +  LLPK  FP    E+ N  +  +++  R S     R  R   S+  
Sbjct: 24  FSSNYFNIPSYST--LLPKTLFP----ETSNGLRALLLYSSRRSHGPTLRGGRRPCSLSI 83

Query: 120 -VAHASLIEAPILWAGRVCIFYALLRAGLAGSQSNPLVSDLEFSDGE----SISDLGFSK 179
               ASL+E+P+LWAGRVCIFYALL+AGLAGSQ+NPLVSDLE SDG+      +D+GFSK
Sbjct: 84  STIQASLLESPVLWAGRVCIFYALLKAGLAGSQANPLVSDLERSDGDGGNGESTDMGFSK 143

Query: 180 WLEVVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHF 239
           WL  ++GKPV EA D+RKLVSKWHPTTKGTL+RNYRVPSKSEGRRLLKAIASLLSDDDHF
Sbjct: 144 WLNSIQGKPVKEAADRRKLVSKWHPTTKGTLKRNYRVPSKSEGRRLLKAIASLLSDDDHF 203

Query: 240 IDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLNQKDYTKAEK 299
           +DATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHL VEITPFP+GPL +KDYTKAEK
Sbjct: 204 VDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPSGPLTEKDYTKAEK 263

Query: 300 LERVLRSGPSV 301
           LERVLR+GPSV
Sbjct: 264 LERVLRTGPSV 268

The following BLAST results are available for this feature:

BLAST of Carg18005 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927378.1	1.3e-158	97.00	uncharacterized protein LOC111434216 [Cucurbita moschata]	[more]
XP_023531897.1	7.2e-141	98.44	uncharacterized protein LOC111794024 [Cucurbita pepo subsp. pepo]	[more]
XP_022967949.1	5.9e-135	94.53	uncharacterized protein LOC111467324 isoform X2 [Cucurbita maxima]	[more]
XP_022967942.1	3.4e-130	84.62	uncharacterized protein LOC111467324 isoform X1 [Cucurbita maxima]	[more]
XP_022157339.1	2.7e-111	79.31	uncharacterized protein LOC111024066 [Momordica charantia]	[more]

BLAST of Carg18005 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G32930.1	1.1e-82	62.21	unknown protein	[more]

BLAST of Carg18005 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg18005 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BQQ9\|A0A1S3BQQ9_CUCME	4.1e-108	78.71	uncharacterized protein LOC103492482 OS=Cucumis melo OX=3656 GN=LOC103492482 PE=...	[more]
tr\|A0A0A0LX12\|A0A0A0LX12_CUCSA	5.3e-108	78.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G604060 PE=4 SV=1	[more]
tr\|M5XTH2\|M5XTH2_PRUPE	4.8e-93	70.83	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G537200 PE=4 SV=1	[more]
tr\|A0A2P5EZJ2\|A0A2P5EZJ2_9ROSA	2.0e-91	70.52	6,7-dimethyl-8-ribityllumazine synthase OS=Trema orientalis OX=63057 GN=TorRG33x...	[more]
tr\|A0A2P5CVY1\|A0A2P5CVY1_PARAD	1.0e-90	69.72	6,7-dimethyl-8-ribityllumazine synthase OS=Parasponia andersonii OX=3476 GN=PanW...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18005-RA	Carg18005-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37229	FAMILY NOT NAMED	coord: 45..300

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg18005	Cla004756	Watermelon (97103) v1	carwmB0163
Carg18005	Csa1G604060	Cucumber (Chinese Long) v2	carcuB0192
Carg18005	MELO3C015648	Melon (DHL92) v3.5.1	carmeB0178
Carg18005	ClCG03G013990	Watermelon (Charleston Gray)	carwcgB0165
Carg18005	CSPI01G29770	Wild cucumber (PI 183967)	carcpiB0199
Carg18005	Cucsa.142870	Cucumber (Gy14) v1	carcgyB0212
Carg18005	CmaCh11G008170	Cucurbita maxima (Rimu)	carcmaB0231
Carg18005	CmoCh10G010190	Cucurbita moschata (Rifu)	carcmoB0240
Carg18005	CmoCh11G008220	Cucurbita moschata (Rifu)	carcmoB0241
Carg18005	Lsi06G004540	Bottle gourd (USVL1VR-Ls)	carlsiB155
Carg18005	Cp4.1LG04g11780	Cucurbita pepo (Zucchini)	carcpeB0248
Carg18005	Cp4.1LG18g01350	Cucurbita pepo (Zucchini)	carcpeB0247
Carg18005	CsGy1G029120	Cucumber (Gy14) v2	carcgybB0186
Carg18005	MELO3C015648.2	Melon (DHL92) v3.6.1	carmedB0182
Carg18005	CsaV3_1G042230	Cucumber (Chinese Long) v3	carcucB0199
Carg18005	Cla97C03G064190	Watermelon (97103) v2	carwmbB0178
Carg18005	Bhi02G001426	Wax gourd	carwgoB0222

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg18005	Carg16968	Silver-seed gourd	carcarB208

The following block(s) are covering this gene:


Gene	Organism	Block
Carg18005	Silver-seed gourd	carcarB209
Carg18005	Cucurbita maxima (Rimu)	carcmaB0230
Carg18005	Wax gourd	carwgoB0221