Cp4.1LG04g06860 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g06860
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Transcription cofactor, putative
Location	Cp4.1LG04 : 4599218 .. 4620775 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGAATCCGAAGTCGATGCCGGGGATTGGAGGTCTCAATTGCAGCCGGATTCTCGGCATCAAATTGTCGACAGAATGTATGATTTCTTGCTTCTTTCATGCATATTTGAGAAATTTGTTTGAGCTTTTGTAACTTCTTTTGTGTTCATAGTTCGCTGCTTAGATTAGTTACTATGGGATGGTTTTCTGAATTAAGCTATGAACAGCAAAATTTTGGAAGTATAGAATCATCTTCGACCTTATTCTACCATTTCTTAGATTTGTGTATAACTGATCGATGCGAACTGATTCCAAAACCTAGTTCTATAATATTATCTCCTTCATTTTTCCATTTCTGGTTTGAAGATATGGTAGGTTAGGTTTTGTGGAGGCGGTTCCTATTTGTTACTTCAGGTATTAGCCCCTTCTTTGAACATAAGAAGTATAAGTTATTTGAAGTAGTATGGATCCTATTGAATTTTCCTCGACTGATCTAAAGTCCCTTTCTTCAAAATGCCTAATTGTGAGATCCCACATTGGTTGAAGAGGGTGGAACGAAACATTCCTCCTTAAGGTGTGGAAACCTCTCCCTAGTAAACGTGTTTTAAAACTGCGAGACTGACGATGATACGTAATAGGCCAAAGCAGGCAATATCTGTTAGAGGTGGGCTTGGGATGTTACAAATGGTATCAGAATCAAACACCGGGAGGTATGCCAGCGAGGACGCTAGGCCCTCAAGGGGGGTGGATTGTGAGATCCCACAACATTCCTTATAAGGGTGTAGAAACGTCTCCCTAGAAGACACACTTTAAAACCGTGAGGCTGACGACAATACGTAACGGGCCTAAGCGGACAATATCTACTAGCGGTGGGCTTGAGCTGTTACAAATGGTATCAGAGTCAGACACTGGGCGGTGTGCCAGCGAAGACTCTAGGCCCTCAAGGGGGGTGGATTGTGAGATCCCATGTTGGTTGGAGAGGGGAACGAAACATTCTTCCTAAGGGTGTGGAGACCTCTCCCTAGTAGACGTGTTTTAAAACCGTGAGGCTGATAGCGATAAGGGGCCAAAGCGAACAATATCTGTTAGTGGNATTTAGATTGTTTCGGAACTTCTGAATGGATTCAAATCATTTGGGGCCTGCTCAAGGTGGAGAATCCGAAGTCGATGCCGGGGATTGGAGGTCTCAATTGCAGCCGGATTCTCGGCATCAAATTGTCGACAGAATGTATGATTTCTTGCTTCTTTCATGCATATTTGAGAAATTTGTTTGAGCTTTTGTAACTTCTTTTGTGTTCATAGTTCGCTGCTTAGATTAGTTACTATGGGATGGTTTTCTGAATTAAGCTATGAACAGCAAAATTTTGGAAGTATAGAATCATCTTCGACCTTATTCTACCATTTCTTAGATTTGTGTATAACTGATCGATGCGAACTGATTCCAAAACCTAGTTCTATAATATTATCTCCTTCATTTTTCCATTTCTGGTTTGAAGATATGGTAGGTTAGGTTTTGTGGAGGCGGTTCCTATTTGTTACTTCAGGTATTAGCCCCTTCTTTGAACATAAGAAGTATAAGTTATTTGAAGTAGTATGGATCCTATTGAATTTTCCTCGACTGATCTAAAGTCCCTTTCTTCAAAATGCCTAATTGTGAGATCCCACATTGGTTGAAGAGGGTGGAACGAAACATTCCTCCTTAAGGTGTGGAAACCTCTCCCTAGTAAACGTGTTTTAAAACTGCGAGACTGACGATGATACGTAATAGGCCAAAGCAGGCAATATCTGTTAGAGGTGGGCTTGGGATGTTACAAATGGTATCAGAATCAAACACCGGGAGGTATGCCAGCGAGGACGCTAGGCCCTCAAGGGGGGTGGATTGTGAGATCCCACAACATTCCTTATAAGGGTGTAGAAACGTCTCCCTAGAAGACACACTTTAAAACCGTGAGGCTGACGACAATACGTAACGGGCCTAAGCGGACAATATCTACTAGCGGTGGGCTTGAGCTGTTACAAATGGTATCAGAGTCAGACACTGGGCGGTGTGCCAGCGAAGACTCTAGGCCCTCAAGGGGGGTGGATTGTGAGATCCCATGTTGGTTGGAGAGGGGAACGAAACATTCTTCCTAAGGGTGTGGAGACCTCTCCCTAGTAGACGTGTTTTAAAACCGTGAGGCTGATAGCGATAAGGGGCCAAAGCGAACAATATCTGTTAGTGGTGAGCTTGGATTGTTACAAATGGTATCAGAGTCAGACATCGGGCGGTGTGCCAGCGAGGACGTTAGGCCCTCAAGGGGGTGGAATGTTAGATCCCACATTAGCTTGAGAGGGGAACGAAACGTTCCTAATAAGGGTGTAGAAACCTCTCCCTAGTAGACGCGTTTTAAAAGNGCCAAAGCAGGCAATATCTGTTAGAGGTGGGCTTGGGATGTTACAAATGGTATCAGAATCAAACACCGGGAGGTATGCCAGCGAGGACGCTAGGCCCTCAAGGGGGGTGGATTGTGAGATCCCACAACATTCCTTATAAGGGTGTAGAAACGTCTCCCTAGAAGACACACTTTAAAACCGTGAGGCTGACGACAATACGTAACGGGCCTAAGCGGACAATATCTACTAGCGGTGGGCTTGAGCTGTTACAAATGGTATCAGAGTCAGACACTGGGCGGTGTGCCAGCGAAGACTCTAGGCCCTCAAGGGGGGTGGATTGTGAGATCCCATGTTGGTTGGAGAGGGGAACGAAACATTCTTCCTAAGGGTGTGGAGACCTCTCCCTAGTAGACGTGTTTTAAAACCGTGAGGCTGATAGCGATAAGGGGCCAAAGCGAACAATATCTGTTAGTGGTGAGCTTGGATTGTTACAAATGGTATCAGAGTCAGACATCGGGCGGTGTGCCAGCGAGGACGTTAGGCCCTCAAGGGGGTGGAATGTTAGATCCCACATTAGCTTGAGAGGGGAACGAAACGTTCCTAATAAGGGTGTAGAAACCTCTCCCTAGTAGACGCGTTTTAAAAGAGCGAAACATAACGGACCAAAGCGGACAATATCTGCTAGTGGTGGGCTTAGACTGTTACACAAATATTTTGAATCATGAACGTGGATTACTGGGGTAGTTTTTCCTTCCTGAACAGCTTCCCATGCTTTTGTGTTTAATGAACTTGTCAGCCATCATCTTCTCCATTTTTATGTAGAATGGAGACATTGAAGAGGCTCCTTCCTGTTTCTGGTCCTGAGGGATTGAGTGAGATGAGGAAAATTGCTGTAAGGTTCGAGGAAAAGATTTATACTGCCGCTACTAGTGAGGTACTTCCTGCTCACTTGTTATAGTTCTCAAGGATTGTAAGAACAAACATTATCTTATTTATGTTTAGCCCATTTGCTATAACAATAAGATTCCAATTTGATTTGGTTCCTAAGATTTAGTTCTGTACTGAAAGATACTTTTGTATAAGAACTTGTTCATAAAGCCCTGATTTATTATGCTATGTAGTGTTGCACTAAATAAATACCAATTATATTTTGAACCTCTGATTTCAGTCAGAGTACCGAAGGAAAATANGTTGGAGAGGGGAACGAAACATTCCTTATAAGAGTGTAGAAACCTCTCCCTAGAAGACACGCTTTAAAAACGTGAGGCTTACGACAATACGTAACAGGCCAAAGCGGACAATATCTATTAGCGGTGAGCTTGGGCTGTTACAAATGGTATCAGAGTTCAGTCACTGGCCGGTGTGCCAGTGAGGACTCTAGGCCCTCAAGGGGGGGGGGGGANAACTGTGAAGATGCTTACTATGGAACCCAACTCTGAGACGACCACTGCATTACCACCAAAGTCTGCGCCCACGATCAACTGCCGAATTCGTTCGACCCGATTCACATCTCCGCCGCCGAATTCTGGCTTTCGTTCAGCCCTAAACAACGAGTAAACTCCATAACAGCCTTACTTTCCATCCTTGAAGGACTCTATTCAATCTCTCTTTTTGCTTTGTTATTGGGATTTTGACGCAGTTTTTTCTCGTGGGTTGTTTTGGAACTTTTGAATGGATTCGAATAATTGGAGGCCTGCTCAAGGTGGAGAACCCAGAGTCGATGCTGGGGATTGGAGGTCTCAATTGCAGCCGGATTCTCGGCATCAAATTGTCGACAGAATGTATGATTTCTTGCTTCTTTCATGCATATTTGAGAAATTTGTTTGAGCTTTTGTAACTTCTTTTGTGTTCATAGTTCGCTGCTTAGATTAGTTACTATGGGATGGTTTTCTGAATTAAGCTATGAACAGCAAAATTTTGGAAGTATAGAATCATCTTCGACCTTATTCTACCATTTCTTAGATTTGTGTATAACTGATCGATGCGAACTGATTCCAAAACCTAGTTCTATAATATTATCTCCTTCATTTTTCCATTTCTGGTTTGAAGATATGGTAGGTTAGGTTTTGTGGAGGCGGTTCCTATTTGTTACTTCAGGTATTAGCCCCTTCTTTGAACATAAGAAGTATAAGTTATTTGAAGTAGTATGGATCCTATTGAATTTTCCTCGACTGATCTAAAGTCCATTCCTTCAAAATGCCTAATTGTGAGATCCCACATTGGTGGAAGAGGGAACAAAACATTTCTCATTAAGATGTAGAAACCTCTCCCTAGTAGACGTGTTTTAAAACTGCGAGACTGACGACGATATGTAACGGGCTAAAGCGGACAATATCTGTTAGCGGTGGGCTTGAGATGTTACAAATGGTATCAGAATCAAACACTGGGAGGTATGCCAGCGAGGGTGCTAGGCCCTCAAGGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGAGGAACGAAACACTCCTATAAGGGTGTAGAAACCTCTCCCTAAAAGACACGGTTTAAAACCGTGAGGCTGACGACAATACGTAACGGGCCATAGCGGACAATATCCCAGTGGTGAGCTTGGGCTGTTACAAATGGTATCAGAGTTAGACACTTGGCGGTGTGCCAGCGAGGACTCTAGGCCCTCAATAGGGGTGGATTGTGAGATCCTACATTAGTTGGAGAGGGGAACGAAACATTCCTTATAAGAGTGTAGAAACCTCTCCCTAGAAGACACGCTTTAAAAACGTGAGGCTTACGACAATACGTAACAGGCCAAAGCGGACAATATCTATTAGCGGTGAGCTTGGGCTGTTACAAATGGTATCAGAGTTCAGTCACTGGCCGGTGTGCCAGTGAGGACTCTAGGCCCTCAAGGGGGGGGGATTGTGAGATCCCACATTGGTTGGAGAGTGGAACGAAACATTCCTTAGAAGGGTGTAGGAACCTCTACCTAGAAGACACGCTTTAAAATCGTGAGGCTGACAACAATATGTAACGGGCCAAAGCGGACAATATCTACTAGTGGTGAGCTTGGGCTGTTACAAACGGTATCAAAGTCAGACACTGGGCGGTGTGTCAGCGAGGGCTCTAGGCCCTCAAGGGGGGTGGATTGTGAAATCCTACATTGGTTGGAGGGGGGAACGAAACATTCCTTAGAAGGGTGTAGAAACCTCTCCCTAGAAGACATACTTTAAAATCGTGAGGCTGATGACAATACATAACGGGCCAAAGCGGACAATATCTACTAGCGGTGAGCTTGGGCTGTTACAAATGGTATCAGAGTCAGACACTGGCCGGTGTGCTAGCGAGGACTCTAGGCCTTCAAGGTGGGTGAATTGTGAGGTCCCACATTGGTTGGAGAGGGGAACAAAACATTCTTCCTAAGGGTGTGGAGACCTCTCCCTAGTAGACGTGTTTTAAAACCGTGAGGCTGACAGCGATAGGAGGCCAAAGCGGACAATATATATTAGTGGTGAACTTGGACTATTACAAATGGTATTAGAGTCAGACATCTGGCGGTGTGCCAGCGAGGACGCTAGGCCCTCAAGGGGGTGGAATGTGAGATCCCACATTAGCTTGAGAGGGGAACGAAACGTTCCTCATAAGGGTGTAGAAACCTCTCCCTAGTAGACGCGTTTTAAAACNATAAGGGTGTAGAAACCTCTCCCTAAAAGACACGGTTTAAAACCGTGAGGCTGACGACAATACGTAACGGGCCATAGCGGACAATATCCCAGTGGTGAGCTTGGGCTGTTACAAATGGTATCAGAGTTAGACACTTGGCGGTGTGCCAGCGAGGACTCTAGGCCCTCAATAGGGGTGGATTGTGAGATCCTACATTAGTTGGAGAGGGGAACGAAACATTCCTTATAAGAGTGTAGAAACCTCTCCCTAGAAGACACGCTTTAAAAACGTGAGGCTTACGACAATACGTAACAGGCCAAAGCGGACAATATCTATTAGCGGTGAGCTTGGGCTGTTACAAATGGTATCAGAGTTCAGTCACTGGCCGGTGTGCCAGTGAGGACTCTAGGCCCTCAAGGNAAGACATGCTTTAAAACCGTGAGGCTGACGACAATACGTAACGGGCCAAAGCGGGCAATATCTACTAGTGGTGTGCTTGGACTGTTACAAATGGTATCAGAGTCGGACAATGGGTGGTGTGCCAGCGAGGACTCTAGGCCCTCAAGGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGTGGAACGAAACATTCCTTAGAAGGGTGTAGGAACCTCTACCTAGAAGACACGCTTTAAAATCGTGAGGCTGACAACAATATGTAACGGGCCAAAGCGGACAATATCTACTAGTGGTGAGCTTGGGCTGTTACAAACGGTATCAAAGTCAGACACTGGGCGGTGTGTCAGCGAGGGCTCTAGGCCCTCAAGGGGGGTGGATTGTGAAATCCTACATTGGTTGGAGGGGGGAACGAAACATTCCTTAGAAGGGTGTAGAAACCTCTCCCTAGAAGACATACTTTAAAATCGTGAGGCTGATGACAATACATAACGGGCCAAAGCGGACAATATCTACTAGCGGTGAGCTTGGGCTGTTACAAATGGTATCAGAGTCAGACACTGGCCGGTGTGCTAGCGAGGACTCTAGGCCTTCAAGGTGGGTGAATTGTGAGGTCCCACATTGGTTGGAGAGGGGAACAAAACATTCTTCCTAAGGGTGTGGAGACCTCTCCCTAGTAGACGTGTTTTAAAACCGTGAGGCTGACAGCGATAGGAGGCCAAAGCGGACAATATATATTAGTGGTGAACTTGGACTATTACAAATGGTATTAGAGTCAGACATCTGGCGGTGTGCCAGCGAGGACGCTAGGCCCTCAAGGGGGTGGAATGTGAGATCCCACATTAGCTTGAGAGGGGAACGAAACGTTCCTCATAAGGGTGTAGAAACCTCTCCCTAGTAGACGCGTTTTAAAACAGCGAAACGTAACGGGACAAAGCGAACAATATCGGCTAGCGGTGGGCTTAGGCTATTACACTAATATTTTGAATCATGAACGTGGATTACTACGGTAGTTTTTCCTTCCTGAACAGCTTCCCATGCTTTTGTGTTTAATAACCTTGTCAGCCATCATCTTTTCCATTTTTATGTAGAATGGAGACATTGAAGAGGATCCTTCCTGTTTCTGGTCCCGAGGGATTGAGTGAGATGAGGAAAATTGCTGTAAGGTTCGAGGAAAAGATTTATACTGCCGCTACTAGTGAGGTACTTCCTGCTCACTTGTTATAGTTCTCAAGGATTTTAAGAACAAACATTATCTTATTTATGTTTAGCCCATTTGCTAGAACAATAAGATTCCAATTTGATTTGGTTCCTAAGATTTAGTTCTGTACTGATAGATACTTTTGTATAAGAACTTGTTCATAAAGCCCTGATTTATTATGCTATGTAGTGTTGCACTAAATAAATACCAATTATATTTTGAACCTCTGATTTCAGTCAGAGTACCGAAGGAAAATATATGTGAAGATGCTTCTTATGGAACCCAACTCTGAGACGACCACTGCATTACCATCAATGTCTGGGCCTATGGCTTCCGATCAACCTTAGAAACAGGCTGCAATTACTCTTCCACAACATCCAAAATAACACTGCTTCCTCTAATGTATTTACCAACTCTTAGAGGCCAATATACTTCATTGGCTAATAAGGTGAATGAGTCTACAGTTTGAACGTGTTAGTGTTGGAATGAGATATTGTATGATAATTGAAACTGTTCTGAATCTTGAATGTTCATGAGATTGTTTTGAATGAAATATTGTATGACAATTGAAACTGTTCTTAATCTTGAATGTTCATGATATTGTTTTAAATGAGATATTATATGATCATTGAAATTGTTTTTAATCTTGAATGTTGATGATATTGTTTTGAATGAAATATTATATGATAATTGAAATTGTTCTTAATCTTGAATGTCCATGATATTGTTTTGAATGAGATATTATATGATCATTGAAACTGTTCTTAATCTTGAATGTTCATGATATTGTTTTGTTTTGAATGAGATATTATGTGATAATTGAAACTGTTCTTAATCTTGAATGTTCATGATATTGTTTTGANTCCCTAGTAGACGCGTTTTAAAACAGCGAAACGTAACGGGACAAAGCGAACAATATCGGCTAGCGGTGGGCTTAGGCTATTACACTAATATTTTGAATCATGAACGTGGATTACTACGGTAGTTTTTCCTTCCTGAACAGCTTCCCATGCTTTTGTGTTTAATAACCTTGTCAGCCATCATCTTTTCCATTTTTATGTAGAATGGAGACATTGAAGAGGATCCTTCCTGTTTCTGGTCCCGAGGGATTGAGTGAGATGAGGAAAATTGCTGTAAGGTTCGAGGAAAAGATTTATACTGCCGCTACTAGTGAGGTACTTCCTGCTCACTTGTTATAGTTCTCAAGGATTTTAAGAACAAACATTATCTTATTTATGTTTAGCCCATTTGCTAGAACAATAAGATTCCAATTTGATTTGGTTCCTAAGATTTAGTTCTGTACTGATAGATACTTTTGTATAAGAACTTGTTCATAAAGCCCTGATTTATTATGCTATGTAGTGTTGCACTAAATAAATACCAATTATATTTTGAACCTCTGATTTCAGTCAGAGTACCGAAGGAAAATATATGTGAAGATGCTTCTTATGGAACCCAACTCTGAGACGACCACTGCATTACCATCAATGTCTGGGCCTATGGCTTCCGATCAACCTTAGAAACAGGCTGCAATTACTCTTCCACAACATCCAAAATAACACTGCTTCCTCTAATGTATTTACCAACTCTTAGAGGCCAATATACTTCATTGGCTAATAAGGTGAATGAGTCTACAGTTTGAACGTGTTAGTGTTGGAATGAGATATTGTATGATAATTGAAACTGTTCTGAATCTTGAATGTTCATGAGATTGTTTTGAATGAAATATTGTATGACAATTGAAACTGTTCTTAATCTTGAATGTTCATGATATTGTTTTAAATGAGATATTATATGATCATTGAAATTGTTTTTAATCTTGAATGTTGATGATATTGTTTTGAATGAAATATTATATGATAATTGAAATTGTTCTTAATCTTGAATGTCCATGATATTGTTTTGAATGAGATATTATATGATCATTGAAACTGTTCTTAATCTTGAATGTTCATGATATTGTTTTGTTTTGAATGAGATATTATGTGATAATTGAAACTGTTCTTAATCTTGAATGTTCATGATATTGTTTTGAATGAGATATTATCTGATAATTGAAACGGTTTTGAATCTTGTATGTTCATGATATTGTTGTGATAGTTTTTCATGTTCGTATCACTAAATGAAACTGATTCGAAATTTCACGCATATTTGTGACTTATCGGTGACAATAACACGAAAATGGACTTAGAGTGATGTTGTGTGAGTGAAGAGTAGACTCGTGGTGGCCGAAAATCAAGCAGAGACGTCAGAAGGAAAAAGAATCGATCGAAGATTAGGGTTGCGATTAGCGTGACAGTCGGGTGAAGAAGAAACGACCCGTGGACTCGGGTTTGGACTCGGGGCACACCATCTGCAGCCACTGACTTCGTGTAGCCAACGACGACAGGTAAGCTAGGCCCACTTAATGCTACGCATATGGCCTATGAGACGCACCTTGCAACCCACAAAACTCGCGCGATCTGCACTCCCGAGCAACCTGACCCGAAGTCTGTGCCTCAACCCGACTAATGACTCGCGCTTCTCAGCCCCACACGTGTCTTGTCTCCAGTTGCGGCTCGTTCAGCATTGCACTCCTCGACTCGGCTCTGGCGCTGCTCCGTGGCGTAAACGGCTCGGGTTTGTGTATTTCAACATGCAATATAATCTAAACTTAGCCCTACAGATAAAGAATCACTTCAAGGGAAAGTAAAATTCAGATTAACTTGTTGATCAAATATCTCAAGACAATAATACTTGTTTGAGATTCGAATCACTCCACAAACAAGATTGATCTCGAGCTTGAATAATTCTATATGCAACCTAAACTACATAGAATTGCAAAGAAACAACATTGGCTAAAGGAAAGCACAAATGCTCATTTACTGTATTTTAAAAGTCTATTTTACAACTCTAACATACATGGCATTATATAGGCTCAAAATAAAAACTCTTTAACCTTCCACGGGGCTTTCCAAGAGATGTAACTTTCATACTTTATGACCACAATTAGACCATAATTAGTCACCAGGTAAATAAACCTTAAAATACACTAAAAATACAATAACTCTAGATTATCAACATTTAAGAATAAATGAAGCCCCATCTTGAAGTCTTTGTTGCATAAATGAAGCTTGATTATTCTTAACGTGACATTAATGTTGCATGATAAGATGCCTTGGTTCATATCGATTCCTGTTTCCTCAATTTAAGTTGAATTAAGTTAGGAGTTGGATTTACGAAAAGAATTAGGTAAATATTTCTAATAGGTTGAAGCGCCTTCGAATAAGTTGAAACGAACTTCGAGGGACGAAGTCAAACCAATTCAGAAATTAGATAGAGTTTCGGTTAAAGCCAACCAAGTAAGTGGCTCTACTATCAGTATGGTTGGAAGAGTTGCTTTATATATGATGACACGTGCCTAGTGGCCATGTATGTGTCATATGTTTGATGATATAATATGTTTTGCTACATGATATGCCCAGATATGCCAATTAATATTAGAACGTAAATGAATTTCGTATTATGCCTCGATGAATTATGATATGCTATGAAATGCCATTATACGCTGTGATATGATTATACTAGGTCATGATATGTTACGACATGCTATGACATGTTTTGAGACAAGAAGATTTATGATCGACAACCCTTAAGATATGTTTCAAAGATTATGCTATAAATGAAATGATTTTGTAAGGGCTGTCTTGCACGATTTGTTTGCAATGAAAAATGTTGGGACCTCATGCATAAATGTATGTTCACAAACGTAGGGATATTTTCTCTTATGAAGAGTACGAATGCGTACGTTATGAAAAGGAAAATGATCATCATGTTTATCATGATGCTACGACGGTCGCTATTGAATGTTGCAATGTTGCCTTCTAACTTGGGCTGTCTTTAGGATGGTTGATGGCTCGACCGCGCACGACCTTTTGGGCTTGGCTTCGAATGATGATTTTGAACCCCCGCTTGCGGTGGGTGTGAATAGTCGATCGAAGTCCAAGCTCGTTTTAGCGTACGACGCATGAGTGGTGATTTGGTTGCTTGGGTCTATAGGCTTGATGCTCGGGCATCAAACTGTAGGCGACATCTCCTCCTCATTGGTGTGTCCCAAAGTATTTTGAGTGACCGTAGTCCATTTGGGGGTCCGACAATAACACCAGAGAAGCTAGCTCGACCAACACTAGAATTTATGTTTGAATTTTGGGCATTGGATGGGATGAGGTGTGCCTCCTTTAGAACATATTCAAATTTGGTGAAGATCCAACGATTGAAAATGAAGATACGGTAGATTTTCTGATTTGTACTATTTCCGTAATAATCTCAAAGTTCAAGGGTATTTTGGTAATTTCAAAGGTCTAAAATTACTTCTTAGGGTATTGAAAATAACTTGCTATAAGAGTGTCTTAAGATTGGACTCCAATGTGACTACGACTGGACTAGGTCAGTTGCCCAATCCAACATTTGTTGACTGATTCAAAGATTTCAAGAGGTAATTTCTTAGAAATTCATCAGAAAATTTGATGAACATTGAGGAGAAACCGAGTAACTTGGTACCCAAGGTGTGAGGAGACAATCATTTATAAGGCTGTTCCCGATTCACTCTCTCCTTTTGCTTTGTTATTAGGGTTTTGACGCAGTTTAGATTGTTTCGAAACTTTTGAATGGATTCAAATCATTTGGGGCCTGCTCAAGGTGGAGAATNAACATTGGCTAAAGGAAAGCACAAATGCTCATTTACTGTATTTTAAAAGTCTATTTTACAACTCTAACATACATGGCATTATATAGGCTCAAAATAAAAACTCTTTAACCTTCCACGGGGCTTTCCAAGAGATGTAACTTTCATACTTTATGACCACAATTAGACCATAATTAGTCACCAGGTAAATAAACCTTAAAATACACTAAAAATACAATAACTCTAGATTATCAACATTTAAGAATAAATGAAGCCCCATCTTGAAGTCTTTGTTGCATAAATGAAGCTTGATTATTCTTAACGTGACATTAATGTTGCATGATAAGATGCCTTGGTTCATATCGATTCCTGTTTCCTCAATTTAAGTTGAATTAAGTTAGGAGTTGGATTTACGAAAAGAATTAGGTAAATATTTCTAATAGGTTGAAGCGCCTTCGAATAAGTTGAAACGAACTTCGAGGGACGAAGTCAAACCAATTCAGAAATTAGATAGAGTTTCGGTTAAAGCCAACCAAGTAAGTGGCTCTACTATCAGTATGGTTGGAAGAGTTGCTTTATATATGATGACACGTGCCTAGTGGCCATGTATGTGTCATATGTTTGATGATATAATATGTTTTGCTACATGATATGCCCAGATATGCCAATTAATATTAGAACGTAAATGAATTTCGTATTATGCCTCGATGAATTATGATATGCTATGAAATGCCATTATACGCTGTGATATGATTATACTAGGTCATGATATGTTACGACATGCTATGACATGTTTTGAGACAAGAAGATTTATGATCGACAACCCTTAAGATATGTTTCAAAGATTATGCTATAAATGAAATGATTTTGTAAGGGCTGTCTTGCACGATTTGTTTGCAATGAAAAATGTTGGGACCTCATGCATAAATGTATGTTCACAAACGTAGGGATATTTTCTCTTATGAAGAGTACGAATGCGTACGTTATGAAAAGGAAAATGATCATCATGTTTATCATGATGCTACGACGGTCGCTATTGAATGTTGCAATGTTGCCTTCTAACTTGGGCTGTCTTTAGGATGGTTGATGGCTCGACCGCGCACGACCTTTTGGGCTTGGCTTCGAATGATGATTTTGAACCCCCGCTTGCGGTGGGTGTGAATAGTCGATCGAAGTCCAAGCTCGTTTTAGCGTACGACGCATGAGTGGTGATTTGGTTGCTTGGGTCTATAGGCTTGATGCTCGGGCATCAAACTGTAGGCGACATCTCCTCCTCATTGGTGTGTCCCAAAGTATTTTGAGTGACCGTAGTCCATTTGGGGGTCCGACAATAACACCAGAGAAGCTAGCTCGACCAACACTAGAATTTATGTTTGAATTTTGGGCATTGGATGGGATGAGGTGTGCCTCCTTTAGAACATATTCAAATTTGGTGAAGATCCAACGATTGAAAATGAAGATACGGTAGATTTTCTGATTTGTACTATTTCCGTAATAATCTCAAAGTTCAAGGGTATTTTGGTAATTTCAAAGGTCTAAAATTACTTCTTAGGGTATTGAAAATAACTTGCTATAAGAGTGTCTTAAGATTGGACTCCAATGTGACTACGACTGGACTAGGTCAGTTGCCCAATCCAACATTTGTTGACTGATTCAAAGATTTCAAGAGGTAATTTCTTAGAAATTCATCAGAAAATTTGATGAACATTGAGGAGAAACCGAGTAACTTGGTACCCAAGGTGTGAGGAGACAATCATTTATAAGGCTGTTCCCGATTCACTCTCTCCTTTTGCTTTGTTATTAGGGTTTTGACGCAGTTTAGATTGTTTCGAAACTTTTGAATGGATTCAAATCATTTGGGGCCTGCTCAAGGTGGAGAATCCGAAGTCGATGCTGGGGATTGGAGGTCTCAATTGCAGCCGGAATCTCGGCATCGAATTGTCGACAAGATGTATGATTACTTTCTTCTTTCATGCCATTAATACCCTATTTGAGAAATTTGTTTGCGTTTTTGTAACTTTTTGATTCATAGTTCGCTGCTTAGATTAGTTACTAGGGGATGGTTTTCTGAATTAAGCTATGAACGGCAAAACCTTATCCTACTTTTTCTTAGATTTGTGTTGAACTGATGGATGGGAATTGATTCCAAAACCTCGTTGAAGATTGTTGGGAGGGAATTCCATGTTGGTTAATTAAGAGGATGATTGTAAGAAATATTATCTTCATTGGTATGAGGCCTTTTGGAAAACCAAAAGAAAAGCCACGAGAGGTTATGCTCAAAGTGGAAACTATCATATCATTGTAAAGAGTCGTGATTCCTAACATGGTATCAAAGTCATGCACTTAACTTAGCAATGTTAATAGAATCTTCAATTGTCGAACAAATTGTAAGCCTGGAAGGTATAGTCAAAAGTGCTCAAGAGAAAGGAGTCGAGCCTCGTTTAAGGGGCAAATGTTTGACAGCCACATAGACCTCAAAGAAGGCTCTATGGTGTAGTTTGTTCGAGGAAAGGATTGTTGAGAATTGTTGGGAGAGTCGTGGTTCCTAACCAATTTGTTAAAATTATCCCCGTTCATTTTTCCATTTCTGGTTTGAAGATATGGTAGGTTAGATTTTGTGGAGGCAGTTCCTATTTGTTTCTTCAGGTATTATGGTAGGTTAGATTTTGTGGAGGCGGTTCCTATTTGTTGCTTCAGGTATCACCCCCTTCATCGAACATAAGAAGTATAAGTTATTTGAAGCAGTATGGATCCTATTGAATTTTCCTCAACTATTCTAAATTCCATTCCTTTAGAATGCTCTTATATTAGTTGAAAATGCTCCTATATTAGTTGGAGAAGGGAACAAAACATTTCTCGTAAGGGTGTGAAAACGTTTCCTTAGTAGACGTGTTTTAGAACTGTGAGGTTGACGACGATACGAAACAGGCCAAAGTGGACAATATTTGTNAAGTCCAAGCTCGTTTTAGCGTACGACGCATGAGTGGTGATTTGGTTGCTTGGGTCTATAGGCTTGATGCTCGGGCATCAAACTGTAGGCGACATCTCCTCCTCATTGGTGTGTCCCAAAGTATTTTGAGTGACCGTAGTCCATTTGGGGGTCCGACAATAACACCAGAGAAGCTAGCTCGACCAACACTAGAATTTATGTTTGAATTTTGGGCATTGGATGGGATGAGGTGTGCCTCCTTTAGAACATATTCAAATTTGGTGAAGATCCAACGATTGAAAATGAAGATACGGTAGATTTTCTGATTTGTACTATTTCCGTAATAATCTCAAAGTTCAAGGGTATTTTGGTAATTTCAAAGGTCTAAAATTACTTCTTAGGGTATTGAAAATAACTTGCTATAAGAGTGTCTTAAGATTGGACTCCAATGTGACTACGACTGGACTAGGTCAGTTGCCCAATCCAACATTTGTTGACTGATTCAAAGATTTCAAGAGGTAATTTCTTAGAAATTCATCAGAAAATTTGATGAACATTGAGGAGAAACCGAGTAACTTGGTACCCAAGGTGTGAGGAGACAATCATTTATAAGGCTGTTCCCGATTCACTCTCTCCTTTTGCTTTGTTATTAGGGTTTTGACGCAGTTTAGATTGTTTCGAAACTTTTGAATGGATTCAAATCATTTGGGGCCTGCTCAAGGTGGAGAATCCGAAGTCGATGCTGGGGATTGGAGGTCTCAATTGCAGCCGGAATCTCGGCATCGAATTGTCGACAAGATGTATGATTACTTTCTTCTTTCATGCCATTAATACCCTATTTGAGAAATTTGTTTGCGTTTTTGTAACTTTTTGATTCATAGTTCGCTGCTTAGATTAGTTACTAGGGGATGGTTTTCTGAATTAAGCTATGAACGGCAAAACCTTATCCTACTTTTTCTTAGATTTGTGTTGAACTGATGGATGGGAATTGATTCCAAAACCTCGTTGAAGATTGTTGGGAGGGAATTCCATGTTGGTTAATTAAGAGGATGATTGTAAGAAATATTATCTTCATTGGTATGAGGCCTTTTGGAAAACCAAAAGAAAAGCCACGAGAGGTTATGCTCAAAGTGGAAACTATCATATCATTGTAAAGAGTCGTGATTCCTAACATGGTATCAAAGTCATGCACTTAACTTAGCAATGTTAATAGAATCTTCAATTGTCGAACAAATTGTAAGCCTGGAAGGTATAGTCAAAAGTGCTCAAGAGAAAGGAGTCGAGCCTCGTTTAAGGGGCAAATGTTTGACAGCCACATAGACCTCAAAGAAGGCTCTATGGTGTAGTTTGTTCGAGGAAAGGATTGTTGAGAATTGTTGGGAGAGTCGTGGTTCCTAACCAATTTGTTAAAATTATCCCCGTTCATTTTTCCATTTCTGGTTTGAAGATATGGTAGGTTAGATTTTGTGGAGGCAGTTCCTATTTGTTTCTTCAGGTATTATGGTAGGTTAGATTTTGTGGAGGCGGTTCCTATTTGTTGCTTCAGGTATCACCCCCTTCATCGAACATAAGAAGTATAAGTTATTTGAAGCAGTATGGATCCTATTGAATTTTCCTCAACTATTCTAAATTCCATTCCTTTAGAATGCTCTTATATTAGTTGAAAATGCTCCTATATTAGTTGGAGAAGGGAACAAAACATTTCTCGTAAGGGTGTGAAAACGTTTCCTTAGTAGACGTGTTTTAGAACTGTGAGGTTGACGACGATACGAAACAGGCCAAAGTGGACAATATTTGTTAGTAGCGAGCTTAGACTGTTACAAATGGTATCAGAGTCAGACATCGAAAGATGTGCCAGCGAAGACGCTAGGCTCTCAAAGGGGTGGATTGTGAGATCCCACGTTGGTTGGAGAGGGGAATGAAACATTCTTCATAAGAGTGTGGAAACCTCTCCCTAGTAGATGCGTTTTAAAACTGTGAGGCTGACAGTAATATGTAACGGACCAAAGTGGACAATATCTGCTAGCGGTAAGCTTAAGCTGTTACACTAATATTTTGAATCATGGACGTGGGTTACAGCTATAGTGTTTCGCTCCCAAACAGCTTCCTGTGCTTTTGCATTTAATAAACTTGTCAGCCACCATCTTTTCCATTTTTATGTAGAATTGAGACATTGAAGAGGCACCTTCCTGTTTCGGGTCCTGAGGGGTTGAGTGAGGTGAGGAAAATTGCTGTAAGGTTCGAGGAAAAGGTTCACACTGTCGCTACCAGTCAGGTACTTGCTGCTCTCACTTGTATGAAGCCCTGATCTATTATGCTATCTACTAAATACAACACTGAGTACTCACCATTTCTATTTTGAACCTCTGATTTCAGTCAGATTACCTAAGGAAAATATCTCTGAGGATGCTTACTATGGAAACCAAGCCTGGGACGACCCCTGCATTACCATCAATGTCTGGGCCTATGGCTTCCAATCAACCTTAGCCACGCCTGCAATGACTCTCCCAGAATATCCAAAATAACACTGCTCCTTCTAATGTATTTACCAACTCTGTGAGGCCAATAATGTAAATATACTTTATTCGCTATTAAGGTAAACACTCTACTATTATTAGAACGTTTCAGTGCTTGGAATGAGATATTTATATGATAATTGAAACTCTTCTGCCTCTTTTAAGTGTTCATGAGATTGGTTTGAATGAGATATCATATCATAATTAAAATTGTTCTGAATCTTGAGTGTTCATGAGACTGGTTTGAATTGAAACTGTTCTGAATCTTGAGTGTTCACGAGATTGGTTTGAATGAGATATTATATGATAATTGAAACTGTTTTGAATCTTGAGTGTTCATATTAGATGATGATTGAAACTGTTCTGAATCTTGAATGTTCATGAGATTGGTTTGAATGAGATATTACATGATAATTGAAGCGGTTCTGAATCTTGAATGTTCATGAGATTGTTTTGAATGAGATATGATATGATAATTGAAATTGTTTTGAATCTTGAATGTTTATGAGATTGTTTTGAATGAGATGTTATATGATAATTGAAACGGATATGAATCTTGAATGTTCATGATATTGTTGTGATAGTTTTTCATGTTGGTATCACTAAATAAAAATGTTTCGGAATCTCACGCATATTTGTGACTTCATTAAACGCTATGTTTACAAAGGTTATGTGTAACTGCAGCAGAAAAAAGAAAAAAAAAGAATGATGAATGATGNCTTTTGTTGGTCCCTTTTTCCTTCTCGAACACCTTGAAATTCTTTCTCGGAGAAATTAAAATTTCGAGAAATTCCTTAAAATTTGAAAAAATGTGCTTACTTTTTCCGTGCCTAAAATTACTTCTTATGAGGATGAAAATAACTCATTTAAGACTCTTGTTCTCGTTTGAATGTCTTAATTTCTTTTCTTGATGTTTTGGGTCGATCCTTATTTTGGATATTACACCAAACCTCAAAGCCCAATCCAACAAGCTTACAGACTCGATTCCAATGTGATTACGACTGGACTATGTCAGTTGTCCATCCCAACATTTGTCGACTGATGCGAAGATGTCAAGAGGTAATTTCTTAGAAATTCATAAGAAAATATTTTATGAACATTGAGGAGAAACCGAGGTGTGTCGATTCTTCACTCTCTCCTTTTGCTTTGTTATTGGGGTTTTGACGCAATTTCTTCTCGTAGGTTATTTCGCAACTTTTGAATGGATTCAAATCATTTAGGGCCTGCTCAAGGTGGAGAACCCGAAGTCGATGCCGGGGTTTGGAGGTCTCAGTTGCCGCCGGATTCTCGGCATCGAATTGTCAACAGCATGTATGATTTCTTGCTTCTTTGAGAAGTTTGTCTGAGATTTTGTAACTTTTTGTGTTCACAGTTCGCTGCTTAGATTAGTTACTATGTGATGGTTTTCTGAATTAAGCTATGAACGGCAAAACCTTTTTCTACCTTTTCTTAAATTTGTGTTTTAACTGATGGATGCGAACTGATTTTTCCAAAACCTTATCAAAGTAAAAACTACGAGAGATTATGCTTAAAGTGGAAAATATCATGCAATTGCATAAAGTCGTGATTCCTAACTTGGTATCAGAGTCATGCTATATTAAGATATAGCAATGTTGATAGAATCTCAAATGTCGAACAAAGAAGTTGTGAGCTTTGAAGGTGTAGTCAAAAGTGACTCAAGTGTTCTCTGTTCAAGGGATCCAGAGAAAGAAGTCGAGGGTGTACTTTGTTCGAGGGCTTCAGAGAAAGGAGTCGAGCCTCGTTTAAGGGGAGATTGTTCTTGAGGGCTACATAGTTCTCAGGAGAGTCTCTATAGTGTAGTTACTTTGTTCGAGGGCTCCAGAGAAAGTAGTCGAGCTTCGTTTAAGGGGAAATTGTTCTCGAGGACTACATAGTTCTCAGGAGAAGTTCTATAGTGTAGTTTGTTCGAGGGAAGGATTGTTGAAGATTGGTGAGAGAGTGGTGATTTAAAATTATCCCGTTCACTTTTCCATTTCTGGTTTGAAGATGTGGTAGGTTAGATTTTGTGGATGCGGTTCCTATTTGTTTCTTCAAGTATTACCCCCTTCATTGAACATAAGACGTATATCTTATTTGAAGCAGTATGGATCCTATTGAATTTTCCTCAACTGTTCTAAAGTCCATTCGTTCCGAATGCCTAATTGTGAGATCCCATAGTAGTTGGAGAGGGGAACGAAACATTCGTCGTAATGGTGTGAAAACCTCTCCCTAGTAGACGCGTTTTAAAACCGTGAGACTGACAATGATACTTAACGGACCAAAGCGGACAATATATTTTAGTGGTGGGCTTAGGCTGTTACAAATGGTACTAGAGTCACCTAGCGAGGACGCTAGACCCTCTAGGGGTGGAATGTGAGATCCCACATCGGTTGGAGAGCGGAACCCTAGACCCTCAAGAGGTGATTGCGAGATCCCATATCGGTTGGAGAGGGGAACCCTAGACCCTCAAGGGGTGAATTGTGAGATCCCACATCAGTTGGAGAGGGGAACCTTAGACCCTCAAGGCATGGATTGTGAGATCCCACATTGGTTGGAGAGGGAACGAAACATTCCTCGTAAGGGTGTGGAAACCTCCATAGTAAACGCGTTTTAAAACGGCGATACATAACAGGTCAAAACAAATAATATCTGCTAGCGGTAAGCTTAAGCTGTTACACTAATATTTTGAATCATGGACGTGGGTTACAGCCATAGTGTTTCGCTCTCGAACAGCTTCCCATGCTTTTGCGTTTAATAAACTTGTCAGCCATCATCTTTTCCATTTTTATGTAGCATTGAGACATTGAAGAGGCACATTCCTGTTTCTGGTCCTGAGGGATTGAATGAGTTGAGGAAAATTGCTGTAAGGTTCGAGGAAAAGGTTTACAATGCCGCTACCAGTCAGGTACTTGCTGCTCTCACTTGTATAAAGCCCTGATTTATTATGCTATCTACTAAATACAACGCTGAGTACTCACCATTTCCATTTTGAACCTCTGATTTCAGTCAGATTACCTAAGGAAAATATCTCTGAGGATGCTTACTATGGAAACCAAGTCTGGGACGTTCACTGCATTACCATCAGTGTCGGGCCCTGTGTCTTCCAATCAACCTTAGTCAGAGAACATCCACAATAACAATGTTTCTTCTAATGTATTTACCAACTCTCAGAGGCCAATATACTTTATTAGTATATTGGCTAATAAGGTAAATGACTCTACTATTAGAACGTCTAGAACGTCTTAGTATGTCTTAGTGTTGGAATGAGATATTATATGATAGTCTTAGTACGTCTTAGTGTTGGAATAGAACTGTTCTGAATCTTGAATGTTTATTATGTTAGTCTTAGTACGTCTTAGTGTTGGAATGAGATATTATATGATAATTAGAACTGTTCTAAATCTTGAATGTTTATTGAGAACGGTTCTGAATCTTGAATGTTCGTTCAGAACGGTTATGAATCTTGAATGTTCATTGAGAACAGTTCTGAATCTTGAATGTTCGTTGAGAACGGTTCTGAATCTTGAATGTTCGTTGAGAACGGTTCCGAATCTTGGTTCTGAATCTTGAATGTTCGTTGAGAACCGTTCTGAATCTTGAATGTTCGTTGAGAACGATTCTGAATCTTGAATGTTCGTTGAGAACGGTTCTGAATCTTGAATGTTCATTGAGAACTGTTCTGAATCTTGAATGTTCATTGAGAACTGTTCCGAATCTTGAATGTTCATTGAGATTGTTGTGATAGTTTTTCATGTTCGTATCACTTAATGAAAATGTTACTTAATGAAAATGTTACGGAATCTCATGCATATTTGTGACTTTATAAACGCTATGTTTCTAAGGAGCTGTATAACGG

mRNA sequence

GGAGAATCCGAAGTCGATGCCGGGGATTGGAGGTCTCAATTGCAGCCGGATTCTCGGCATCAAATTGTCGACAGAATATATGGTAGGTTAGGTTTTGTGGAGGCGGTTCCTATTTGTTACTTCAGAATGGAGACATTGAAGAGGCTCCTTCCTGTTTCTGGTCCTGAGGGATTGAGTGAGATGAGGAAAATTGCTGTAAGGTTCGAGGAAAAGATTTATACTGCCGCTACTAGTGAGTTTTTTCTCGTGGGTTGTTTTGGAACTTTTGAATGGATTCGAATAATTGGAGGCCTGCTCAAGGTGGAGAACCCAGAGTCGATGCTGGGGATTGGAGGTCTCAATTGCAGCCGGATTCTCGGCATCAAATTGTCGACAGAATGTGGAGAATCCGAAGTCGATGCTGGGGATTGGAGGTCTCAATTGCAGCCGGAATCTCGGCATCGAATTGTCGACAAGATAATTGAGACATTGAAGAGGCACCTTCCTGTTTCGGGTCCTGAGGGGTTGAGTGAGGTGAGGAAAATTGCTGTAAGGTTCGAGGAAAAGGTTCACACTGTCGCTACCAGTCAGTCAGATTACCTAAGGAAAATATCTCTGAGGATGCTTACTATGGAAACCAAGCCTGGGACGACCCCTGCATTACCATCAATTTGTCCATCCCAACATTTGTCGACTGATGCGAAGATGTCAAGAGGGCCTGCTCAAGGTGGAGAACCCGAAGTCGATGCCGGGGTTTGGAGGTCTCAGTTGCCGCCGGATTCTCGGCATCGAATTGTCAACAGCATCATTGAGACATTGAAGAGGCACATTCCTGTTTCTGGTCCTGAGGGATTGAATGAGTTGAGGAAAATTGCTGTAAGGTTCGAGGAAAAGGTTTACAATGCCGCTACCAGTCAGTCAGATTACCTAAGGAAAATATCTCTGAGGATGCTTACTATGGAAACCAAGTCTGGGACGTTCACTGCATTACCATCAGTGTCGGGCCCTGTGTCTTCCAATCAACCTTAGTCAGAGAACATCCACAATAACAATGTTTCTTCTAATGTATTTACCAACTCTCAGAGGCCAATATACTTTATTAGTATATTGGCTAATAAGGTAAATGACTCTACTATTAGAACGTCTAGAACGTCTTAGTATGTCTTAGTGTTGGAATGAGATATTATATGATAGTCTTAGTACGTCTTAGTGTTGGAATAGAACTGTTCTGAATCTTGAATGTTTATTATGTTAGTCTTAGTACGTCTTAGTGTTGGAATGAGATATTATATGATAATTAGAACTGTTCTAAATCTTGAATGTTTATTGAGAACGGTTCTGAATCTTGAATGTTCGTTCAGAACGGTTATGAATCTTGAATGTTCATTGAGAACAGTTCTGAATCTTGAATGTTCGTTGAGAACGGTTCTGAATCTTGAATGTTCGTTGAGAACGGTTCCGAATCTTGGTTCTGAATCTTGAATGTTCGTTGAGAACCGTTCTGAATCTTGAATGTTCGTTGAGAACGATTCTGAATCTTGAATGTTCGTTGAGAACGGTTCTGAATCTTGAATGTTCATTGAGAACTGTTCTGAATCTTGAATGTTCATTGAGAACTGTTCCGAATCTTGAATGTTCATTGAGATTGTTGTGATAGTTTTTCATGTTCGTATCACTTAATGAAAATGTTACTTAATGAAAATGTTACGGAATCTCATGCATATTTGTGACTTTATAAACGCTATGTTTCTAAGGAGCTGTATAACGG

Coding sequence (CDS)

GGAGAATCCGAAGTCGATGCCGGGGATTGGAGGTCTCAATTGCAGCCGGATTCTCGGCATCAAATTGTCGACAGAATATATGGTAGGTTAGGTTTTGTGGAGGCGGTTCCTATTTGTTACTTCAGAATGGAGACATTGAAGAGGCTCCTTCCTGTTTCTGGTCCTGAGGGATTGAGTGAGATGAGGAAAATTGCTGTAAGGTTCGAGGAAAAGATTTATACTGCCGCTACTAGTGAGTTTTTTCTCGTGGGTTGTTTTGGAACTTTTGAATGGATTCGAATAATTGGAGGCCTGCTCAAGGTGGAGAACCCAGAGTCGATGCTGGGGATTGGAGGTCTCAATTGCAGCCGGATTCTCGGCATCAAATTGTCGACAGAATGTGGAGAATCCGAAGTCGATGCTGGGGATTGGAGGTCTCAATTGCAGCCGGAATCTCGGCATCGAATTGTCGACAAGATAATTGAGACATTGAAGAGGCACCTTCCTGTTTCGGGTCCTGAGGGGTTGAGTGAGGTGAGGAAAATTGCTGTAAGGTTCGAGGAAAAGGTTCACACTGTCGCTACCAGTCAGTCAGATTACCTAAGGAAAATATCTCTGAGGATGCTTACTATGGAAACCAAGCCTGGGACGACCCCTGCATTACCATCAATTTGTCCATCCCAACATTTGTCGACTGATGCGAAGATGTCAAGAGGGCCTGCTCAAGGTGGAGAACCCGAAGTCGATGCCGGGGTTTGGAGGTCTCAGTTGCCGCCGGATTCTCGGCATCGAATTGTCAACAGCATCATTGAGACATTGAAGAGGCACATTCCTGTTTCTGGTCCTGAGGGATTGAATGAGTTGAGGAAAATTGCTGTAAGGTTCGAGGAAAAGGTTTACAATGCCGCTACCAGTCAGTCAGATTACCTAAGGAAAATATCTCTGAGGATGCTTACTATGGAAACCAAGTCTGGGACGTTCACTGCATTACCATCAGTGTCGGGCCCTGTGTCTTCCAATCAACCTTAG

Protein sequence

GESEVDAGDWRSQLQPDSRHQIVDRIYGRLGFVEAVPICYFRMETLKRLLPVSGPEGLSEMRKIAVRFEEKIYTAATSEFFLVGCFGTFEWIRIIGGLLKVENPESMLGIGGLNCSRILGIKLSTECGESEVDAGDWRSQLQPESRHRIVDKIIETLKRHLPVSGPEGLSEVRKIAVRFEEKVHTVATSQSDYLRKISLRMLTMETKPGTTPALPSICPSQHLSTDAKMSRGPAQGGEPEVDAGVWRSQLPPDSRHRIVNSIIETLKRHIPVSGPEGLNELRKIAVRFEEKVYNAATSQSDYLRKISLRMLTMETKSGTFTALPSVSGPVSSNQP

Homology

[Close]

BLAST of Cp4.1LG04g06860 vs. Swiss-Prot
Match: MD15A_ARATH (Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana GN=MED15A PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.6e-29
Identity = 61/99 (61.62%), Postives = 80/99 (80.81%), Query Frame = 1


Query: 237 GEPEVDAGVWRSQLPPDSRHRIVNSIIETLKRHIPVSGPEGLNELRKIAVRFEEKVYNAA 296
           GEP +D G WR+QLPPDSR +IVN I+ETLK+H+P SGPEG+NELR+IA RFEEK+++ A
Sbjct: 13  GEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGA 72

Query: 297 TSQSDYLRKISLRMLTMETKS----GTFTALPSVSGPVS 332
            +Q+DYLRKIS++MLTMETKS    G+  A+P+ +   S
Sbjct: 73  LNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTS 111

[Close]

BLAST of Cp4.1LG04g06860 vs. TrEMBL
Match: A0A078H3Z0_BRANA (BnaC05g12030D protein OS=Brassica napus GN=BnaC05g12030D PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 9.5e-60
Identity = 138/329 (41.95%), Postives = 192/329 (58.36%), Query Frame = 1


Query: 2   ESEVDAGDWRSQLQPDSRHQIVDRIYGRLGFVEAVPICYFRMETLKRLLPVSGPEGLSEM 61
           E  V+A DWR+ L PDSR +  ++I G                T+K+ +P  G E   E+
Sbjct: 49  EPAVNASDWRTCLLPDSRKKNANKIKG----------------TVKKHIPNRGKERNKEL 108

Query: 62  RKIAVRFEEKIYTAATSEFFLVGCFGTFEWIRIIGGLLKVENPESMLGIGGLNCSRILGI 121
           +KIA  FEE I+  A  + F+      F W                       C +I+ +
Sbjct: 109 KKIAATFEELIFNTAIDQGFVF-----FFWS---------------------GCEKIIKV 168

Query: 122 KL----STECGESEVDAGDWRSQLQPESRHRIVDKIIETLKRHLPVSGPEGLSEVRKIAV 181
            +    S   GE  +D  DWR+ L  +SR +IV KI+ TL +HLP SGPEG++E+++IAV
Sbjct: 169 LILMAPSVNNGEPAMDTNDWRNHLPFDSRQKIVSKIMATLMKHLPYSGPEGINELKRIAV 228

Query: 182 RFEEKVHTVATSQSDYLRKISLRMLTMETKPGTTPALPSICPSQHLST-----DAKMSRG 241
           RFEEKV + A  Q+DYLRKIS++MLTMET+        S  P+   +      D  M  G
Sbjct: 229 RFEEKVFSSAVYQTDYLRKISMKMLTMETRSQNVAGSASYIPADRSNLALDELDNLMING 288

Query: 242 PAQ----GGEPEVDAGVWRSQLPPDSRHRIVNSIIETLKRHIPVSGPEGLNELRKIAVRF 301
             +      EP +++G WR+QLPP SR  IVN I++TLKRH P SGPEG+NEL++IA RF
Sbjct: 289 NVEPFLLNEEPAINSGDWRTQLPPGSRQNIVNKIMDTLKRHFPYSGPEGINELKRIAARF 335

Query: 302 EEKVYNAATSQSDYLRKISLRMLTMETKS 318
           EEK++++A +Q+DYLRKIS++MLTMETK+
Sbjct: 349 EEKIFSSAVNQTDYLRKISMKMLTMETKA 335

[Close]

BLAST of Cp4.1LG04g06860 vs. TrEMBL
Match: F2DL41_HORVD (Predicted protein OS=Hordeum vulgare var. distichum PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 6.0e-54
Identity = 118/213 (55.40%), Postives = 153/213 (71.83%), Query Frame = 1


Query: 135 GDWRSQLQPESRHRIVDKIIETLKRHLPVSGPEGLSEVRKIAVRFEEKVHTVATSQSDYL 194
           GDWR++LQPE+R R+V+KI+ETLK+HLPVS PEGL+E++ IAVRFEEK++T AT+QSDYL
Sbjct: 19  GDWRAELQPEARGRVVNKIMETLKKHLPVSVPEGLNELQIIAVRFEEKMYTAATNQSDYL 78

Query: 195 RKISLRMLTMETKPGTTPALPSICPSQHLSTDAKMS---------RGPAQGGEPE----- 254
           R+IS++ML+METK   TP    + P+Q+    A +S           P QG +P      
Sbjct: 79  RRISIKMLSMETKTQQTPGNAQVIPNQNNPGQAPVSCLRMPDGTPWRPTQGSDPAAVTAV 138

Query: 255 ---------VDA-------GVWRSQLPPDSRHRIVNSIIETLKRHIPVSGPEGLNELRKI 314
                    VD        G WR+QL P++R R+VN I+ +L++H+PVSGPEG NEL KI
Sbjct: 139 VAAAAATVGVDPNAPAPTRGDWRAQLQPEARSRVVNKIMVSLQKHLPVSGPEGPNELEKI 198

Query: 315 AVRFEEKVYNAATSQSDYLRKISLRMLTMETKS 318
           AVRFEEK+YNAATSQSDYLRKISL+ML+METK+
Sbjct: 199 AVRFEEKIYNAATSQSDYLRKISLKMLSMETKT 231

[Close]

BLAST of Cp4.1LG04g06860 vs. TrEMBL
Match: M4EBE6_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.9e-53
Identity = 125/291 (42.96%), Postives = 179/291 (61.51%), Query Frame = 1


Query: 42  RMETLKRLLPVSGPEGLSEMRKIAVRFEEKIYTAATSEFFLVGCFG----TFEWI--RII 101
           RM TL + LP SGPEG++E+++IAVRFEEK+++++  +   +        T E     + 
Sbjct: 208 RMATLMKHLPYSGPEGINELKRIAVRFEEKVFSSSVHQNDYLRKISMKMLTMETKSQNVA 267

Query: 102 GGLLKVENPESMLGIGGLNCSRILGIKLSTECGESE--VDAGDWRSQLQPESRHRIVDKI 161
           G    +    S L    LN   I    +       E  + +GDWR+QL P SR  IV+KI
Sbjct: 268 GSASSIPADSSNLAFDELNNLMINNGNVEPFLLNEEPAIKSGDWRTQLPPGSRQNIVNKI 327

Query: 162 IETLKRHLPVSGPEGLSEVRKIAVRFEEKVHTVATSQSDYLRKISLRMLTMETKPGTTPA 221
           ++TLK+H P SGPEG++E+++IA RFEEK+ + A  Q+DYLRKIS+++LTMETK      
Sbjct: 328 MDTLKKHFPYSGPEGINELKRIAARFEEKIFSSAVHQTDYLRKISMKILTMETKAQNAAG 387

Query: 222 LPS--ICPSQHLSTDAKMSRGPAQGGEPE-------VDAGVWRSQLPPDSRHRIVNSIIE 281
             S  +  S +L+ D  M+       EP        +++G WR QLPPDSR + ++ + E
Sbjct: 388 SDSSILADSNNLTLDDIMNHLIKDNAEPSLLNVEPAINSGDWRIQLPPDSRQKNIDKLTE 447

Query: 282 TLKR-HIPVSGPEGLNELRKIAVRFEEKVYNAATSQSDYLRKISLRMLTME 315
            LK+ H+P SGPEG+NE  KIA RFE+KV+N A + +DYLRKISL +LT+E
Sbjct: 448 ALKKQHLPFSGPEGVNEHSKIASRFEDKVFNTAANLNDYLRKISLEVLTIE 498

[Close]

BLAST of Cp4.1LG04g06860 vs. TrEMBL
Match: W5AVR2_WHEAT (Uncharacterized protein OS=Triticum aestivum PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 6.6e-53
Identity = 119/205 (58.05%), Postives = 151/205 (73.66%), Query Frame = 1


Query: 136 DWRSQLQPESRHRIVDKIIETLKRHLPVSGPEGLSEVRKIAVRFEEKVHTVATSQSDYLR 195
           DWR+QL PE+R R+V+KI+E LK+HLPVS PEGL+E++ IAVRFE+K++  ATSQSDYLR
Sbjct: 23  DWRAQLLPEARSRVVNKIMECLKKHLPVSVPEGLNELQIIAVRFEDKIYAAATSQSDYLR 82

Query: 196 KISLRMLTMETK--PGTTPALPS-------ICPSQHLSTDAKMSRGP---------AQGG 255
           KISL+ML+METK  PG    +P+        C      T  + ++GP         A GG
Sbjct: 83  KISLKMLSMETKTQPGNAQVIPNQMNLGQASCLRMPDGTPWRPTQGPDPAAVAAAVAAGG 142

Query: 256 --EPEVDA---GVWRSQLPPDSRHRIVNSIIETLKRHIPVSGPEGLNELRKIAVRFEEKV 315
             +P   A   G WR QL P++R RIVN+I+E+LK+H+PVS PEGLNEL KIAVRFEEK+
Sbjct: 143 GVDPNASAPTGGDWRPQLQPEARGRIVNNIMESLKKHLPVSRPEGLNELEKIAVRFEEKI 202

Query: 316 YNAATSQSDYLRKISLRMLTMETKS 318
           YNAATSQSDYLRK+SL+ML+METK+
Sbjct: 203 YNAATSQSDYLRKVSLKMLSMETKT 227

[Close]

BLAST of Cp4.1LG04g06860 vs. TrEMBL
Match: A0A0D3CAL8_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 6.6e-53
Identity = 127/325 (39.08%), Postives = 189/325 (58.15%), Query Frame = 1


Query: 1   GESEVDAGDWRSQLQPDSRHQIVDRIYGRLGFVEAVPICYFRMETLKRLLPVSGPEGLSE 60
           GE  +D  DWR+ L  DSR +IV +I                M TL + L  SGPEG++E
Sbjct: 8   GEPAMDTNDWRNHLPFDSRQKIVSKI----------------MATLMKHLSYSGPEGINE 67

Query: 61  MRKIAVRFEEKIYTAATSEFFLVGCFG----TFEWI--RIIGGLLKVENPESMLGIGGLN 120
           +++IAVRFEEK++++A  +   +        T E     + G    +    S L +  L+
Sbjct: 68  LKRIAVRFEEKVFSSAVYQTDYLRKISMKMLTMETRSQNVAGSASYIPADRSNLALDELD 127

Query: 121 CSRILG-IKLSTECGESEVDAGDWRSQLQPESRHRIVDKIIETLKRHLPVSGPEGLSEVR 180
              I G ++      E  +++GDWR+QL P SR  IV+KI++TLKRH P SGPEG++E++
Sbjct: 128 NLMINGNVEPFLLNEEPAINSGDWRTQLPPGSRQNIVNKIMDTLKRHFPYSGPEGINELK 187

Query: 181 KIAVRFEEKVHTVATSQSDYLRKISLRMLTMETKPGTTPALPS--ICPSQHLSTDAKMSR 240
           +IA RFEEK+ + A +Q+DYLRKIS++MLTMETK        S  +  S +L+ D    +
Sbjct: 188 RIAARFEEKIFSSAVNQTDYLRKISMKMLTMETKAQNAAGSDSSILADSNNLTLDIISKQ 247

Query: 241 GPAQGG-------------EPEVDAGVWRSQLPPDSRHRIVNSIIETLKRHIPVSGPEGL 300
            P+                EP +++G WR QLP DSR + ++ ++ETLK+H+P SG EG+
Sbjct: 248 RPSWNHLIKDNAETSLLNVEPTINSGDWRIQLPLDSRQKNIDKLMETLKKHVPYSGQEGI 307

Query: 301 NELRKIAVRFEEKVYNAATSQSDYL 304
            ELR+IA+ FEE ++N A +Q  +L
Sbjct: 308 EELRRIALSFEELIFNTAINQDTHL 316

[Close]

BLAST of Cp4.1LG04g06860 vs. TAIR10
Match: AT1G15790.1 (AT1G15790.1 unknown protein)

HSP 1 Score: 159.5 bits (402), Expect = 3.7e-39
Identity = 84/179 (46.93%), Postives = 118/179 (65.92%), Query Frame = 1


Query: 135 GDWRSQLQPESRHRIVDKIIETLKRHLPVSGPEGLSEVRKIAVRFEEKVHTVATSQSDYL 194
           GDWR+Q    SR RIV+KI+ET  + LP   PEG +E+RKIAVRFEEK+   A++Q++YL
Sbjct: 5   GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYL 64

Query: 195 RKISLRMLTMETKPGTTPALPSICPSQHLSTDAKMSRGPAQGGEPEVDAGVWRSQLPPDS 254
           R+I ++ML METK        S   +    T   +        EP V+ G WR+Q P DS
Sbjct: 65  RQICMKMLNMETKSQNAAGSSSADDN----TPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 124

Query: 255 RHRIVNSIIETLKRHIPVSGPEGLNELRKIAVRFEEKVYNAATSQSDYLRKISLRMLTM 314
           R + +N++++TLK+ +P SG EG++EL +IAV  EE ++N+A +Q DYL KISL+M TM
Sbjct: 125 RQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEELIFNSAINQEDYLGKISLKMRTM 179

[Close]

BLAST of Cp4.1LG04g06860 vs. TAIR10
Match: AT1G15780.1 (AT1G15780.1 unknown protein)

HSP 1 Score: 129.8 bits (325), Expect = 3.1e-30
Identity = 61/99 (61.62%), Postives = 80/99 (80.81%), Query Frame = 1


Query: 237 GEPEVDAGVWRSQLPPDSRHRIVNSIIETLKRHIPVSGPEGLNELRKIAVRFEEKVYNAA 296
           GEP +D G WR+QLPPDSR +IVN I+ETLK+H+P SGPEG+NELR+IA RFEEK+++ A
Sbjct: 13  GEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGA 72

Query: 297 TSQSDYLRKISLRMLTMETKS----GTFTALPSVSGPVS 332
            +Q+DYLRKIS++MLTMETKS    G+  A+P+ +   S
Sbjct: 73  LNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTS 111

[Close]

BLAST of Cp4.1LG04g06860 vs. NCBI nr
Match: gi|828322731|ref|XP_012573082.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 15a-like [Cicer arietinum])

HSP 1 Score: 277.3 bits (708), Expect = 3.5e-71
Identity = 173/363 (47.66%), Postives = 218/363 (60.06%), Query Frame = 1


Query: 2   ESEVDAGDWRSQLQPDSRHQIVDRIYGRLGFVEAVPICYFRMETLKRLLPVSGPEGLSEM 61
           E  +D  +WR+QLQPDSR +IV++I                M+T K+ LPVSG EGL E+
Sbjct: 13  EPTIDTSEWRAQLQPDSRQRIVNKI----------------MDTSKKHLPVSGSEGLLEL 72

Query: 62  RKIAVRFEEKIYTAATSEFFLVGCFGTFEWIRIIGGLLKVENPESMLGIGGLNCSRILGI 121
            KIA RFEEKI+TAATS+          +++R I   +     +S   I     S   G 
Sbjct: 73  WKIAQRFEEKIFTAATSQS---------DYLRKISMKMLTMETKSQSSIANNMPSNEGGP 132

Query: 122 KLS-----------------TECGESEVDAGDWRSQLQPESRHRIVDKIIETLKRHLPVS 181
                                   E  +D  +WR+QLQP+SR RIV+KI++TLK+HLPVS
Sbjct: 133 SNKPPDQDNSHLMDSNNWRPNPGTEPTIDTSEWRAQLQPDSRQRIVNKIMDTLKKHLPVS 192

Query: 182 GPEGLSEVRKIAVRFEEKVHTVATSQSDYLRKISLRMLTMETKPGTTPAL--------PS 241
           G EGL E+ KIA RFEEK+ T ATSQSDYLRKIS++MLTMETK  ++ A         PS
Sbjct: 193 GSEGLLELWKIAQRFEEKIFTAATSQSDYLRKISMKMLTMETKSQSSIANNMPSNEGGPS 252

Query: 242 ICPSQHLSTDAKMSRG--PAQGGEPEVDAGVWRSQLPPDSRHRIVNSIIETLKRHIPVSG 301
             P    ++    S    P  G EP +D   WR+QL PDSR RIVN I++TLK+H+PVSG
Sbjct: 253 NKPPDQDNSHLMDSNNWRPNPGTEPTIDTSEWRAQLQPDSRQRIVNKIMDTLKKHLPVSG 312

Query: 302 PEGLNELRKIAVRFEEKVYNAATSQSDYLRKISLRMLTMETKSGTFTA--LPSVSGPVSS 336
            EGL EL KIA RFEEK++ AATSQSDYLRKIS++MLTMETKS +  A  +PS  G  S+
Sbjct: 313 SEGLLELWKIAQRFEEKIFTAATSQSDYLRKISMKMLTMETKSQSSIANNMPSNEGGPSN 350

[Close]

BLAST of Cp4.1LG04g06860 vs. NCBI nr
Match: gi|698581864|ref|XP_009777664.1| (PREDICTED: uncharacterized protein LOC104227178 isoform X10 [Nicotiana sylvestris])

HSP 1 Score: 265.0 bits (676), Expect = 1.8e-67
Identity = 158/316 (50.00%), Postives = 197/316 (62.34%), Query Frame = 1


Query: 5   VDAGDWRSQLQPDSRHQIVDRIYGRLGFVEAVPICYFRMETLKRLLPVSGPEGLSEMRKI 64
           +D+ DWR+QL PDSR +IV+ I                 ETLKR L V+  EG+ E++KI
Sbjct: 1   MDSADWRTQLLPDSRQRIVNNI----------------TETLKRQLSVTREEGVQELKKI 60

Query: 65  AVRFEEKIYTAATSEFFLVGCFGTFEWIRIIGGLLKVENPESMLG---IGGLNCSRILGI 124
           AV FEEKIYTAATS+   +        ++I+    K  NP + L      G N       
Sbjct: 61  AVGFEEKIYTAATSQPDYLQKIS----LKILTMETKSHNPMTNLSNAASSGQNAHDPGTA 120

Query: 125 KLSTECGESEVDAGDWRSQLQPESRHRIVDKIIETLKRHLPVSGPEGLSEVRKIAVRFEE 184
           +     G   +DA DWR+QL P+ R  IV+KI ETL RHLPV+G EG+ E++KIA+RFEE
Sbjct: 121 RAGAAAGA--MDAADWRTQLLPDFRQSIVNKITETLMRHLPVTGEEGVQELKKIALRFEE 180

Query: 185 KVHTVATSQSDYLRKISLRMLTMETKPGTTPALPSICPSQHLSTDAKMSRGPAQGGEPEV 244
           K++T A SQ DYLRKISL+MLTMET     P   S   +            PA     ++
Sbjct: 181 KIYTAAISQPDYLRKISLKMLTMETD-SQNPMTNSANAASSGQNAHDPGTAPAGAAAGDM 240

Query: 245 DAGVWRSQLPPDSRHRIVNSIIETLKRHIPVSGPEGLNELRKIAVRFEEKVYNAATSQSD 304
           DA  WR+QL PDSR RIVN I ETLKRH+PV+G EG+ EL+KIA+RFEEK+Y AA SQ D
Sbjct: 241 DAVDWRTQLLPDSRQRIVNKITETLKRHLPVTGEEGVQELKKIALRFEEKIYTAAISQPD 293

Query: 305 YLRKISLRMLTMETKS 318
           YLRKISL+MLTMETKS
Sbjct: 301 YLRKISLKMLTMETKS 293

[Close]

BLAST of Cp4.1LG04g06860 vs. NCBI nr
Match: gi|698581860|ref|XP_009777663.1| (PREDICTED: uncharacterized protein LOC104227178 isoform X9 [Nicotiana sylvestris])

HSP 1 Score: 265.0 bits (676), Expect = 1.8e-67
Identity = 158/316 (50.00%), Postives = 197/316 (62.34%), Query Frame = 1


Query: 5   VDAGDWRSQLQPDSRHQIVDRIYGRLGFVEAVPICYFRMETLKRLLPVSGPEGLSEMRKI 64
           +D+ DWR+QL PDSR +IV+ I                 ETLKR L V+  EG+ E++KI
Sbjct: 1   MDSADWRTQLLPDSRQRIVNNI----------------TETLKRQLSVTREEGVQELKKI 60

Query: 65  AVRFEEKIYTAATSEFFLVGCFGTFEWIRIIGGLLKVENPESMLG---IGGLNCSRILGI 124
           AV FEEKIYTAATS+   +        ++I+    K  NP + L      G N       
Sbjct: 61  AVGFEEKIYTAATSQPDYLQKIS----LKILTMETKSHNPMTNLSNAASSGQNAHDPGTA 120

Query: 125 KLSTECGESEVDAGDWRSQLQPESRHRIVDKIIETLKRHLPVSGPEGLSEVRKIAVRFEE 184
           +     G   +DA DWR+QL P+ R  IV+KI ETL RHLPV+G EG+ E++KIA+RFEE
Sbjct: 121 RAGAAAGA--MDAADWRTQLLPDFRQSIVNKITETLMRHLPVTGEEGVQELKKIALRFEE 180

Query: 185 KVHTVATSQSDYLRKISLRMLTMETKPGTTPALPSICPSQHLSTDAKMSRGPAQGGEPEV 244
           K++T A SQ DYLRKISL+MLTMET     P   S   +            PA     ++
Sbjct: 181 KIYTAAISQPDYLRKISLKMLTMETD-SQNPMTNSANAASSGQNAHDPGTAPAGAAAGDM 240

Query: 245 DAGVWRSQLPPDSRHRIVNSIIETLKRHIPVSGPEGLNELRKIAVRFEEKVYNAATSQSD 304
           DA  WR+QL PDSR RIVN I ETLKRH+PV+G EG+ EL+KIA+RFEEK+Y AA SQ D
Sbjct: 241 DAVDWRTQLLPDSRQRIVNKITETLKRHLPVTGEEGVQELKKIALRFEEKIYTAAISQPD 293

Query: 305 YLRKISLRMLTMETKS 318
           YLRKISL+MLTMETKS
Sbjct: 301 YLRKISLKMLTMETKS 293

[Close]

BLAST of Cp4.1LG04g06860 vs. NCBI nr
Match: gi|698581831|ref|XP_009777654.1| (PREDICTED: uncharacterized protein LOC104227178 isoform X1 [Nicotiana sylvestris])

HSP 1 Score: 265.0 bits (676), Expect = 1.8e-67
Identity = 158/316 (50.00%), Postives = 197/316 (62.34%), Query Frame = 1


Query: 5   VDAGDWRSQLQPDSRHQIVDRIYGRLGFVEAVPICYFRMETLKRLLPVSGPEGLSEMRKI 64
           +D+ DWR+QL PDSR +IV+ I                 ETLKR L V+  EG+ E++KI
Sbjct: 1   MDSADWRTQLLPDSRQRIVNNI----------------TETLKRQLSVTREEGVQELKKI 60

Query: 65  AVRFEEKIYTAATSEFFLVGCFGTFEWIRIIGGLLKVENPESMLG---IGGLNCSRILGI 124
           AV FEEKIYTAATS+   +        ++I+    K  NP + L      G N       
Sbjct: 61  AVGFEEKIYTAATSQPDYLQKIS----LKILTMETKSHNPMTNLSNAASSGQNAHDPGTA 120

Query: 125 KLSTECGESEVDAGDWRSQLQPESRHRIVDKIIETLKRHLPVSGPEGLSEVRKIAVRFEE 184
           +     G   +DA DWR+QL P+ R  IV+KI ETL RHLPV+G EG+ E++KIA+RFEE
Sbjct: 121 RAGAAAGA--MDAADWRTQLLPDFRQSIVNKITETLMRHLPVTGEEGVQELKKIALRFEE 180

Query: 185 KVHTVATSQSDYLRKISLRMLTMETKPGTTPALPSICPSQHLSTDAKMSRGPAQGGEPEV 244
           K++T A SQ DYLRKISL+MLTMET     P   S   +            PA     ++
Sbjct: 181 KIYTAAISQPDYLRKISLKMLTMETD-SQNPMTNSANAASSGQNAHDPGTAPAGAAAGDM 240

Query: 245 DAGVWRSQLPPDSRHRIVNSIIETLKRHIPVSGPEGLNELRKIAVRFEEKVYNAATSQSD 304
           DA  WR+QL PDSR RIVN I ETLKRH+PV+G EG+ EL+KIA+RFEEK+Y AA SQ D
Sbjct: 241 DAVDWRTQLLPDSRQRIVNKITETLKRHLPVTGEEGVQELKKIALRFEEKIYTAAISQPD 293

Query: 305 YLRKISLRMLTMETKS 318
           YLRKISL+MLTMETKS
Sbjct: 301 YLRKISLKMLTMETKS 293

[Close]

BLAST of Cp4.1LG04g06860 vs. NCBI nr
Match: gi|694444421|ref|XP_009348733.1| (PREDICTED: uncharacterized protein LOC103940355 [Pyrus x bretschneideri])

HSP 1 Score: 264.6 bits (675), Expect = 2.3e-67
Identity = 152/324 (46.91%), Postives = 197/324 (60.80%), Query Frame = 1


Query: 1   GESEVDAGD-WRSQLQPDSRHQIVDRIYGRLGFVEAVPICYFRMETLKRLLPVSGPEGLS 60
           GE  ++AGD WR+QLQ +SRH+IV +I                +ET+KR +P  GPEGL 
Sbjct: 13  GEPPMEAGDDWRTQLQSESRHRIVAKI----------------IETMKRHVPFDGPEGLR 72

Query: 61  EMRKIAVRFEEKIYTAATSEFFLVGCFGTFEWIRIIGGLLKVENPESMLGIGGLNCSR-I 120
           E+ +IAV FEE +Y  A+S+          ++IR I   +     +S   +   +    +
Sbjct: 73  EIERIAVTFEENMYVGASSQ---------SDYIRKISLKMLTMETKSQTAVPHASLDPFL 132

Query: 121 LGIKLST---ECGESEVDAGDWRSQLQPESRHRIVDKIIETLKRHLPVSGPEGLSEVRKI 180
           +   + T   E GE  ++ GDWRSQLQ +SRHRIV KI+ETLKRHLP +G EGL E+ KI
Sbjct: 133 MDTNIQTRPPEGGEPSMETGDWRSQLQLDSRHRIVAKILETLKRHLPFNGEEGLRELEKI 192

Query: 181 AVRFEEKVHTVATSQSDYLRKISLRMLTMETKPGTTPALPSICPSQHLSTDAKMSRGPAQ 240
           A RFEEK++  A+SQSDYLRKISL+ML ME KP                          Q
Sbjct: 193 AARFEEKIYVAASSQSDYLRKISLKMLAMENKP--------------------------Q 252

Query: 241 GGEPEVDAGVWRSQLPPDSRHRIVNSIIETLKRHIPVSGPEGLNELRKIAVRFEEKVYNA 300
           GGE  +    WRSQL PDSRHRI+  I E L+RH+P +G EGL+EL ++AVRFEEK+Y  
Sbjct: 253 GGETSMVTSNWRSQLQPDSRHRIIAKITEVLRRHLPFTGEEGLHELERVAVRFEEKIYTV 285

Query: 301 ATSQSDYLRKISLRMLTMETKSGT 320
           A SQSDYL+KISL++ TME KS T
Sbjct: 313 ALSQSDYLQKISLKLHTMENKSQT 285

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g06860 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MD15A_ARATH	5.6e-29	61.62	Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana ...	[more]

BLAST of Cp4.1LG04g06860 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A078H3Z0_BRANA	9.5e-60	41.95	BnaC05g12030D protein OS=Brassica napus GN=BnaC05g12030D PE=4 SV=1	[more]
F2DL41_HORVD	6.0e-54	55.40	Predicted protein OS=Hordeum vulgare var. distichum PE=2 SV=1	[more]
M4EBE6_BRARP	3.9e-53	42.96	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]
W5AVR2_WHEAT	6.6e-53	58.05	Uncharacterized protein OS=Triticum aestivum PE=4 SV=1	[more]
A0A0D3CAL8_BRAOL	6.6e-53	39.08	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]

BLAST of Cp4.1LG04g06860 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G15790.1	3.7e-39	46.93	unknown protein	[more]
AT1G15780.1	3.1e-30	61.62	unknown protein	[more]

BLAST of Cp4.1LG04g06860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|828322731\|ref\|XP_012573082.1\|	3.5e-71	47.66	PREDICTED: mediator of RNA polymerase II transcription subunit 15a-like [Cicer a...	[more]
gi\|698581864\|ref\|XP_009777664.1\|	1.8e-67	50.00	PREDICTED: uncharacterized protein LOC104227178 isoform X10 [Nicotiana sylvestri...	[more]
gi\|698581860\|ref\|XP_009777663.1\|	1.8e-67	50.00	PREDICTED: uncharacterized protein LOC104227178 isoform X9 [Nicotiana sylvestris...	[more]
gi\|698581831\|ref\|XP_009777654.1\|	1.8e-67	50.00	PREDICTED: uncharacterized protein LOC104227178 isoform X1 [Nicotiana sylvestris...	[more]
gi\|694444421\|ref\|XP_009348733.1\|	2.3e-67	46.91	PREDICTED: uncharacterized protein LOC103940355 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003712	transcription cofactor activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR003101	Coactivator CBP, KIX domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003712	transcription cofactor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g06860.1	Cp4.1LG04g06860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003101	Coactivator CBP, KIX domain	GENE3D	G3DSA:1.10.246.20		coord: 246..314 score: 2.
IPR003101	Coactivator CBP, KIX domain	PFAM	PF16987	KIX_2	coord: 245..317 score: 1.4E-35coord: 135..208 score: 1.4E-33coord: 8..78 score: 3.2
None	No IPR available	PANTHER	PTHR33137	FAMILY NOT NAMED	coord: 213..317 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG04g06860	CmaCh19G002810	Cucurbita maxima (Rimu)	cmacpeB538
Cp4.1LG04g06860	CmaCh11G016240	Cucurbita maxima (Rimu)	cmacpeB154
Cp4.1LG04g06860	CmoCh11G015020	Cucurbita moschata (Rifu)	cmocpeB126
Cp4.1LG04g06860	CmoCh19G003080	Cucurbita moschata (Rifu)	cmocpeB493
Cp4.1LG04g06860	Cla009435	Watermelon (97103) v1	cpewmB635
Cp4.1LG04g06860	MELO3C018676	Melon (DHL92) v3.5.1	cpemeB604
Cp4.1LG04g06860	ClCG09G013450	Watermelon (Charleston Gray)	cpewcgB575
Cp4.1LG04g06860	CSPI07G05180	Wild cucumber (PI 183967)	cpecpiB697
Cp4.1LG04g06860	Lsi03G008060	Bottle gourd (USVL1VR-Ls)	cpelsiB544
Cp4.1LG04g06860	MELO3C018677.2	Melon (DHL92) v3.6.1	cpemedB715
Cp4.1LG04g06860	CsaV3_7G006140	Cucumber (Chinese Long) v3	cpecucB0868
Cp4.1LG04g06860	CsGy7G004750	Cucumber (Gy14) v2	cgybcpeB969
Cp4.1LG04g06860	Carg24582	Silver-seed gourd	carcpeB0920
Cp4.1LG04g06860	Carg23989	Silver-seed gourd	carcpeB1035

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG04g06860	Cp4.1LG15g02490	Cucurbita pepo (Zucchini)	cpecpeB268

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG04g06860	Cucumber (Chinese Long) v3	cpecucB0861
Cp4.1LG04g06860	Wax gourd	cpewgoB0853
Cp4.1LG04g06860	Cucumber (Gy14) v1	cgycpeB0904
Cp4.1LG04g06860	Cucumber (Chinese Long) v2	cpecuB695
Cp4.1LG04g06860	Watermelon (Charleston Gray)	cpewcgB578
Cp4.1LG04g06860	Cucumber (Gy14) v2	cgybcpeB842