Cp4.1LG04g00280 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g00280
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDNA recombination-mediator protein A
LocationCp4.1LG04 : 1866223 .. 1874299 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATGGAAGAGAGCAAAGCAAAGAGAGAAGAGAGAGAAAATCTGGAAGAGAGCAAAGCAAAGCGAAATAACTTTTGTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGAGAGAGAGAGAGAGGTCCAGAGGATGAGTTGTTCTTCATCATCTTTATCCCTCTGCTGCGTCTTCTTCCCTTTCCCCTCTTCTTCCCCTTCTCTTAGATTCATTAACCTTTCCAATCCCTTCCTCTTCCCAAGCCCTAATGGACGCCGCCGCCGCCGCCCTCCTCCTACTTCTCTCCATACGCCTCTGGTAACTTCTCCCTCTCTATTTCCGCATACGCTTTTCTTGTTTTCTTCTATCTCTTTCTTTCTGTTTTTCCATTTTCCTGCTCTTCTTTTGTGGTTGACGGGATTTTGATTGCTTTGTCTTGCCAAATTTCTTGTTCAAATGAATGACTCTCCGTACTTGCCAGAATTATGTAGGTTTCTTTACCAATTTTGCGTTATTGACTTGGAGCTACTCGTCTTTTTGTGTTTATTATATGCTCAAGAAGTTCGTTGGTTCTTTATGCCCTAAAATTGTAGCAAAGAAAAGAAGATGCGTGATTATTGAGAAATAGAGAGGATTATTTGCTACATATTGAAATTGATTGTTGAGAGCAGTTGTTTATGAACTGTTGAAGTCCACGGGTAGATAATCTGGAGTTCGCTTCATGTACGACATTCATTGATTTCATTAAATAACAAACGATTTTTCTTCAATTTGTTAAGTGGGTTTAGGATATTCATTGGTGCTCCTGGGGTTGGTTGAGTGCCGATTTCAAATGGAATGTATGGAACTACAGCAATGACAGTTGAGAAAAGATGATCCTGTGCCTTTCACTCTTTCTTCAAACGGCATATCACCCCAGAAAAATTACACCAAAAGGGTAGGGAAGCATTAGACCCTTGAGATCCCAAAAGAAACGGTTTGACTTTCTTCGGGTATTTCCAAATCATATTGTAAAGGAGATAACTCTCACTCTTCCCCTTGATCCTCAAGTCTATAAGAAAAGAGCTCACTTAGCTGCCATCCAGATCTCATCCAAGTCCAATGATTGACGAGTTTGTTAGGTTGGAAATCTGCCAAAATATGAGATAGGATGCCCTTCAAGAATCTCATCATCCTTGTGACTTTTTCTTATGCCAAGATTCCAGCTTCTGTTTGAAGAAATCTACGGGCCTTTGATGGATGATACTTTTGGCTTGGTAAAGAATGAAGTCTCATAATTGCTTTAGCAAAAGGCACAATGTCCTACTAAAGATCTTCCCAAAAGTATGTTGAAGAGCCAAAGCCTACTGCCACTTTCATTCTGGAGTAAATGAGGTTTTTGAGCTTGAGAGTATCTTTTCAAGAGCCTTTTGGAGAATGAAGAGAGAGTGTCTGACCTTTTTTCCAAAATTGGAAGCCAATTTTTTCCTCAATGATCTTCCTCCAAACGTATGTTGAAGGTTTCTATTTTTTTAAATAAACAAAGATATATTTATCAAAAGAGAAACAACATAAGGACGAAGGGGCAAGGAGCTCCCTCCCACAAAAACTAATGAAGCACTGCCTCCCAATTCTTTTGTAACAAGTACTATAGTTGCAAAAGAATTTATTGTTTCTAGAACACTGCAAATAAAATGTAATTTGTACACTATTACAAAACAAAACATAAGAATTGGACCTATCCTTAAAGATTCTCCTATTTCTTTCCTACTGAATCTCCCGAACAACACATCTCCACAAAAAAACAATTGCCTTGCCTTTAAGCTTCTAGCCATTAAGAGCTTCTACCAACCACTCGTTCCAACTTCTAAGGACGACACACTAAGACCAAAAGCTTTAAGGCACTGATCTCACCCTCTCCCTGCAAAGTGGCAACTAAGAAAAAGGTAATCATTAGTTTCTTCACCATTTAGGCACAAATAACACAATGAAGGAGACAAAGACACATGGTTTCCATTGTTGTAAATATCTTTTTAAAATATATTTGGAAGAGCCAACCAAGCCATAGTTCAACCACTTAAGACATTNTATATATATATATATATATATATATATATATATATATATATATATATGTTCTAAAGAGCAGATGTTTGAATTTTTTCTGTAGTGTCAAACTCAACAAAATATATGTTTGTTGCGGTCAACTTTGTTTTTATCTAGAGCATAGCAAAACCTTGAACTGTTAATTTCGTTAGTAGACTTGCTAAGTTGATGAAATAGGCATCTCCTTTAGGGTTCTGTTTTAACAGCGACAATAAATTTGGGGTCGCACATGTCAAATTTTATGTGAAAGAAAGAGGGGAAAACATGGAAAAATGCACTTATTGGATATAGTTTCTAATAATAATTTACTCTTTGGGATTGATTAACTCATAAACTATCACTAACGTTATAACTAGCAATCTGGAAATTTGCATCCAAACTCAACACATTGTCATCCCTTGAGCAAGTGCTCTATTAGATAGATGATATCTATCTTTTCACCTGCAAATTTTTATCCCTTTCACTAACAAATCTCTCAAAACTGATAGTTACTTAAGCCGTCCAAACAATTGTTTTGTCTTCTACATAATTGTAAGACAACCGCTAGTTCATAAAATCAAAAGCAAGGAAATTTCATGATTCAACAAGATTCTGGAGAAAACCTCCAACTTCTAAGGGTAAAAGATCCTAAAACTGTCAATTTCCTTCATCCTTTTCCTAATGCATGCCGCACATGCATTCATTTTGACAGTTTGTCCCTTTTTCTATTAGTTTTTTTCTTTTTTTGTTGGATAAGCAGAGTTATAAAGAGAGGAAGGAAACTTCCAACCACCCATGGTGGATTACAAAAATGATCACCAATCAGCCCAAAGATCAATGATTCGATCCTACACCCCGCTATTGTTGAACTCAAAAAACAAACAATATATTGCCAAATAGAGACTTGAGACATAATCAAATAATCTTTAAATTTTGATGTTCATTTGCACAAATAAAAAGTAGAAAAAGGATGGTATCGGTAACACTATGAAAATTAGTCTCCAACCCATGAAAACCTGATTATTTGGTGCCACAAACTCCACAAAAAAGCCCTAGTTATGGACCACCAGAGCAACTTCTTGGTCTTCTTAAAAGGATGATGCACAAAGGAGATTATTTAAGTGGGTAAACTGTTTTCTATTACTAGAATAGACTTCCACAACGATTGGGCAAGAATTTTTTAAACCCTTACCAATGAATTTCTTAAACCCTTAACTGCTGGAGGAGTCTTTCACTATTTATCCCTTCCTCCCTAATAAAGCCCTTTTGTTGTGTCCCACGACAAGTATGCAAGGCTATGAGCCACAAATGTAGGGTGGTTACTTTTGGAGCCTTTACAGTGAAGTTAGAAAGATGGGACCCCTTTGAGGCGCAGGAGAACTACAGTGGTCACCTTTTACAGGGATTGGATAAATTTCAGAAACATTCCCCTGCATTTATGGAGCCGAGCCACATTCAAGGCAATAGGTGATTGCTTTGGGGTTTTGTGGACTGTGCAGATCAAAACTCTTCCCTCATTGAGTGCTTAGTAGTTGCTATTAAAGTGTAAGGGAATTACTGTGGATTCATCCTCGCTGAAGTGAAAACTCCTTAATAGAGACCAGGTGTTTTCCACCCATGTGAGTACGCTCCAATTTGGCTGGTTGTTGGCCAAAAAGAAAGTTGAAGTTCATGGTGGGTTTTCGTCTGAAGCAGCCACAAGGTCAGGTCCTAACTCGATAGATTTGTGGAGGTTAAGGGAAGATTTCTTTTACCCATCAGACACTATTTTTTTACCCGGATAAGACTGCTTGCACACCCCCCATGACTATTAAGGTTAAGGGGAGAGGTTTCAGGCTTCAGCCTAAATTGGAATCACATGCCTAATAAGACTGCTTGCACACCCCCCATGACTGATCATAGTCTTCCCTCAAGCTCCACACGGACGTAGACACCACTGCCAAGAAAAGTAGTAGAAGTCCTTTGCATTAGTGGGCCTTTCCAGATTTGCCCTCTAAATTCAAAAAGCAGACAGATGGAGGAAAGGGCAAAATCAGTCGAGTTCGTGGAAGATTTAGAGACAGATCCTGGAAAAGTCATTTCTGAAAAGAAGAAAGGGGAAATTTTGCTCTACAACCAATACCAAGGCTGAGTTTTCTAATAAACATTTGGGAAAGCTAGGTGATGAAAAAGATATGTTCTCCGAGGTTTTTATTTCCAGCCAAGAAGAGGGTAGATGGGTAGAGGATTGCATAGAGATCCCTGAGAATTATCAGCTTTGTTTTCAAGAAAATGACGTTTACCCTTTATCAAAGATAAATCACGGATGTTATATTTTTTTTCTATAAAGTTCAGTAGTTGACCCATTCATAAGATAAATTTATATTCATTTTGAACAGTAACAAAGTCAACTTTCATTAATGAATATACAAAAGAAAAGGAATGACAGTCTCATCTCCTGGACTTCTGAAGTACGACAAATTCTTCCAATTGGATCATTAAGAGGAAATGAAGGGCATAATCACAAAAAGGGGGGAGCTATTTACACCATGAGAAGGGGAAAAAAAAAATCAGATTCTCTATGGAACTATCCAAAATCTACACATGCAATTTGTTTCTTTTTAGCAATTGGTCCCAAAACACCTTTCTTTTCTTAAAAAGTATCAACATAATTTTTTCTTCATTATTATTATTTGTTGATTGTTGCGGATGGCTGAGGATTTTACCCATGCATTGTCAAGATCCAAAAACTAAGGCTGAAAATATTGAATTTTGATTGAATATGGTTGACACAGACCTAATCTTATTTGTCAATCAACCATGGTTATACTTGTAGTTCTAGCAAGAACATAATTCTAGGACAACTTTTATGGAATCAAACTTATCCATTATCCCGTCTAAATGCTGATGTCATGTAAATATTTCTAGTGTAGATTAATTTGTTTGCATGGCGTATTTTAGGTATCAAAGTTGATAACAACTTGTGATTAACTTGGTATTTTCTGTAACTGATTTGTCCTTGATGACTTATGATGATTAGGCAGCTTCATAATCTTTGCATCTGTCATATGCAATGTCAATCATTAATTCTCTTTTGGAACATTGATGCTCTTATCTTGTTAGGTTATCTGAACAGATTTTTATTCCCAGTTGACTTGATTCACTTCAACCTTCTAATTGGAATTTCTGTTCAGTATTGATACTATTTTAGAGTTGGCATGGATAAATAGCGAGTTTCTACTTCACCACATTTGTGGGCAGTTGGTTTTCACTAATGATTTACTATCAGGGGATCTTTTTTATGTACTGGTTATAGTGCATCCAAGGGCATATAAAAGGAGATAAAGATGGAGATAGTTACGTGCATCAGACGAAGAATACAACGCAGATGTTTGGATTTGGGTTTAATGATGAGAAGACAGGCACTCAAATTCCAACCCAGGCTCAGTCCATAGTGGAAGGATCAGGATCAGTTATGGTGACCGAGTTCAAACCAGTTCCTGATGTTGACTATCTACAGGTGAGTGATAAGATACGATCATTTCGAATACTTATGTTGGATGTTGGCCATCTTCTGGAAAAAGATGATTAAAAGGAAAATGGGCTATATTTTTCTTCCAATGCATTTTGAATCTGAAGTTTTTTTTCCTGCATGACTTGAGCATTTGCAAATGTTAGAATTTCCTGAGGAAGTAATTCTTTTGGGTGACCTTTTATAAAGCTTTAAGTCTTGGCTCTTAGTGCCCACAATTTCTCCATTTTAATGCTTGCGTGAAGCTCTTTTCAAGTCCCAATGTGTTTTTATTTTCACAGGAGTTATTGGCCATTCAACAACAAGGTCCTAGATCCATTGGTTTCTTTGGAACTCGGAATATGGGTTTCTTGCATCAAGAACTCATCGAGATTCTTAGCTATGCAATGGTTATAACGGTAGGATATGTGGTCTAATGTCAATGATTATACTGAAGGGCTATTTGGTTTTTGATGAGTACATAAACTTCATATTGCTTGATAACTTCTGTATGCAGAAAAACCACATCTATACTTCAGGAGCATCTGGAACCAATGCAGCAGTTATCAGAGGTGCATTGAGGGCTGAGAAACCAGAACTGCTTACTGTCATTTTGCCACAAAGTTTGAAGAAACAACCTCCTGAGAGCCAGGAATTATTGTCCAAAGTAAGTTTGTTGATGAGTTCAATTGGGTTGGTCTGTTATGTTCATTGAATTATTTATCTATCATGATTATCTTGGCATTTGTAGGTTAAGAATGTGATAGAGAAGCCCTACAACGATCATCTACCTTTAATAGAAGCTAGCAGGTAGCTTTGCGTGTAAATGTATTATTACATTGTTTAAAAAAAACCCTTCTTCTATTCATGATCGTCCATGAAAGTCGTCGTAAAATTATTTTCCAACGACATACCTCGGGTTGCAACTGAAGTTAAAATCAAATGAGATAACGGAATTTTGGCGTATCTTTGCTTGTAAATGTATATCATTACATTGTTTTCAAAATGTTTCAAGTTTGAATGTTCCATCTAATGCCTTTGTTGAAATTTGTGCAGGTTATGCAATATGGACATCATTTCGCATGTACAGCAAGTCATTTGCTTTGCATTTCATGATAGTAGGTTGCTCATGGAAACTTGTCAAGAGGCAAAAAATCTCCGAAAAATCGTTACTCTTTTTTATCTCGACTAAGAATAAGAAGAAACTTCTCCAAATTCTGTAAATACATTGTTTGACAGAGATTATTACATATTTTCCCTAATTTTGGTTGTAAAGTTGCTGCTCCTGCCTGCTCAAAGAGGGCCAATTTCCCTTTCCAAACCTTACTGTTCAAATCAGGAATTCTGCAGTGGTAAGTACATTTACAGGTTAGAATTCTCAAAAAAATTTCAGATGAAGATTTATGAGGAACGTTTTGAGTTTGTGTTTGGTAAATGAGAAAGTTGGTGTTCATAAAACGTTTAAAGCCTAAAACGTTTGTACCCACTTGAGTTTCTCAGTTTATTTTTGTTTTTAAAATTTGATTAATAATTCAAACATTTTCCTAAGAACAATACAATGAAAGATAAGAAAAACAAGAATAAAAAATCAAAGACTACAAACTAATTATCAAATGGTACTTTACACCACTTTTGATCGTGATCTAATCCAATTGAGTAGTTCTTAATGGTAGGTAAATGGAAATAAAGTTACAATGCTCATTTGCCTGTTCTAATGAAAGGGGCATTGATATCAAAACTTTCAAGTCTAAAACCAAATAGAGATGAATTGTCACAACAAAAAAAAAAAACAAAACAGAACACGTTAGGCTATAGTGTTTTCATTAGAAGAATGTAAACACAAGAAAAGGAGAAAACTCTTGCTGTGCCAATGTAGAACGAACACTGAGAAATAACCTCAACGATTAGCCTTTGCAACTCTCTCGACCTCATCCTTTTTCTTGATGGCGTAACTGTTAGATGAACCCTTCGCTGCGTTAATAAGTTCATCAGCCAAGCATTCTGCAATGGTTTTGATATTTCTGAAGGCAGCCTCACGAGCACCTGTCGTGAGAAGATAGATTGCCTGGTTAACGCGTCGCAGAGGGGATATATCCACAGCTTGACGCCTAACAACACCAGCTGAACCGATTCGAGTGGCGTCTTCACGTGGTCCACTGTTAACAACAGCATCAACAATGACTTGAATTGGGTTGAGATCAGTTAGAAGATGAATGATCTCCATTGCATGTTTAATAATCCTGACAGCCATAAGCTTCTTCCCATTGTTTCTACCGTGCATCATAAGAGAATTTGTGAGCCTTTCCACAATTGGGCACTGAGCTTTTCGGAACCGCTTGACAGAGTACCTCCCAGCTGTGTGGGGAACATAGGTGGCATGCTTGGAAGGAGCAACACCAATGTAATCACCCAGAGACATATCATTCACTTGGACGTCATCGAAGGTCCACCGGTTGAACAGCTTCACATCATGATGAGGCTGGGTCAGTTCCTGGTTTACCACATCAACTTCAACAGCCATGGTTCCTAAT

mRNA sequence

TATGGAAGAGAGCAAAGCAAAGAGAGAAGAGAGAGAAAATCTGGAAGAGAGCAAAGCAAAGCGAAATAACTTTTGTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGAGAGAGAGAGAGAGGTCCAGAGGATGAGTTGTTCTTCATCATCTTTATCCCTCTGCTGCGTCTTCTTCCCTTTCCCCTCTTCTTCCCCTTCTCTTAGATTCATTAACCTTTCCAATCCCTTCCTCTTCCCAAGCCCTAATGGACGCCGCCGCCGCCGCCCTCCTCCTACTTCTCTCCATACGCCTCTGTGCATCCAAGGGCATATAAAAGGAGATAAAGATGGAGATAGTTACGTGCATCAGACGAAGAATACAACGCAGATGTTTGGATTTGGGTTTAATGATGAGAAGACAGGCACTCAAATTCCAACCCAGGCTCAGTCCATAGTGGAAGGATCAGGATCAGTTATGGTGACCGAGTTCAAACCAGTTCCTGATGTTGACTATCTACAGGAGTTATTGGCCATTCAACAACAAGGTCCTAGATCCATTGGTTTCTTTGGAACTCGGAATATGGGTTTCTTGCATCAAGAACTCATCGAGATTCTTAGCTATGCAATGGTTATAACGAAAAACCACATCTATACTTCAGGAGCATCTGGAACCAATGCAGCAGTTATCAGAGGTGCATTGAGGGCTGAGAAACCAGAACTGCTTACTGTCATTTTGCCACAAAGTTTGAAGAAACAACCTCCTGAGAGCCAGGAATTATTGTCCAAAGTTAAGAATGTGATAGAGAAGCCCTACAACGATCATCTACCTTTAATAGAAGCTAGCAGGTTATGCAATATGGACATCATTTCGCATGTACAGCAAGTCATTTGCTTTGCATTTCATGATAGTAGGTTGCTCATGGAAACTTGTCAAGAGGCAAAAAATCTCCGAAAAATCGTTACTCTTTTTTATCTCGACTAAGAATAAGAAGAAACTTCTCCAAATTCTGTAAATACATTGTTTGACAGAGATTATTACATATTTTCCCTAATTTTGGTTGTAAAGTTGCTGCTCCTGCCTGCTCAAAGAGGGCCAATTTCCCTTTCCAAACCTTACTGTTCAAATCAGGAATTCTGCAGTGGTAAGTACATTTACAGGTTAGAATTCTCAAAAAAATTTCAGATGAAGATTTATGAGGAACGTTTTGAGTTTGTGTTTGGTAAATGAGAAAGTTGGTGTTCATAAAACGTTTAAAGCCTAAAACGTTTGTACCCACTTGAGTTTCTCAGTTTATTTTTGTTTTTAAAATTTGATTAATAATTCAAACATTTTCCTAAGAACAATACAATGAAAGATAAGAAAAACAAGAATAAAAAATCAAAGACTACAAACTAATTATCAAATGGTACTTTACACCACTTTTGATCGTGATCTAATCCAATTGAGTAGTTCTTAATGGTAGGTAAATGGAAATAAAGTTACAATGCTCATTTGCCTGTTCTAATGAAAGGGGCATTGATATCAAAACTTTCAAGTCTAAAACCAAATAGAGATGAATTGTCACAACAAAAAAAAAAAACAAAACAGAACACGTTAGGCTATAGTGTTTTCATTAGAAGAATGTAAACACAAGAAAAGGAGAAAACTCTTGCTGTGCCAATGTAGAACGAACACTGAGAAATAACCTCAACGATTAGCCTTTGCAACTCTCTCGACCTCATCCTTTTTCTTGATGGCGTAACTGTTAGATGAACCCTTCGCTGCGTTAATAAGTTCATCAGCCAAGCATTCTGCAATGGTTTTGATATTTCTGAAGGCAGCCTCACGAGCACCTGTCGTGAGAAGATAGATTGCCTGGTTAACGCGTCGCAGAGGGGATATATCCACAGCTTGACGCCTAACAACACCAGCTGAACCGATTCGAGTGGCGTCTTCACGTGGTCCACTGTTAACAACAGCATCAACAATGACTTGAATTGGGTTGAGATCAGTTAGAAGATGAATGATCTCCATTGCATGTTTAATAATCCTGACAGCCATAAGCTTCTTCCCATTGTTTCTACCGTGCATCATAAGAGAATTTGTGAGCCTTTCCACAATTGGGCACTGAGCTTTTCGGAACCGCTTGACAGAGTACCTCCCAGCTGTGTGGGGAACATAGGTGGCATGCTTGGAAGGAGCAACACCAATGTAATCACCCAGAGACATATCATTCACTTGGACGTCATCGAAGGTCCACCGGTTGAACAGCTTCACATCATGATGAGGCTGGGTCAGTTCCTGGTTTACCACATCAACTTCAACAGCCATGGTTCCTAAT

Coding sequence (CDS)

ATGAGTTGTTCTTCATCATCTTTATCCCTCTGCTGCGTCTTCTTCCCTTTCCCCTCTTCTTCCCCTTCTCTTAGATTCATTAACCTTTCCAATCCCTTCCTCTTCCCAAGCCCTAATGGACGCCGCCGCCGCCGCCCTCCTCCTACTTCTCTCCATACGCCTCTGTGCATCCAAGGGCATATAAAAGGAGATAAAGATGGAGATAGTTACGTGCATCAGACGAAGAATACAACGCAGATGTTTGGATTTGGGTTTAATGATGAGAAGACAGGCACTCAAATTCCAACCCAGGCTCAGTCCATAGTGGAAGGATCAGGATCAGTTATGGTGACCGAGTTCAAACCAGTTCCTGATGTTGACTATCTACAGGAGTTATTGGCCATTCAACAACAAGGTCCTAGATCCATTGGTTTCTTTGGAACTCGGAATATGGGTTTCTTGCATCAAGAACTCATCGAGATTCTTAGCTATGCAATGGTTATAACGAAAAACCACATCTATACTTCAGGAGCATCTGGAACCAATGCAGCAGTTATCAGAGGTGCATTGAGGGCTGAGAAACCAGAACTGCTTACTGTCATTTTGCCACAAAGTTTGAAGAAACAACCTCCTGAGAGCCAGGAATTATTGTCCAAAGTTAAGAATGTGATAGAGAAGCCCTACAACGATCATCTACCTTTAATAGAAGCTAGCAGGTTATGCAATATGGACATCATTTCGCATGTACAGCAAGTCATTTGCTTTGCATTTCATGATAGTAGGTTGCTCATGGAAACTTGTCAAGAGGCAAAAAATCTCCGAAAAATCGTTACTCTTTTTTATCTCGACTAA

Protein sequence

MSCSSSSLSLCCVFFPFPSSSPSLRFINLSNPFLFPSPNGRRRRRPPPTSLHTPLCIQGHIKGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDYLQELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD
Homology
[Close]
BLAST of Cp4.1LG04g00280 vs. TrEMBL
Match: M5VQR9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009659mg PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 3.8e-99
Identity = 197/260 (75.77%), Postives = 219/260 (84.23%), Query Frame = 1 

Query: 17  FPSSSPSLRFINLSNPFLFPSPNGRRRRRPPPTSLHTPLCIQGHIKGDKDGDSYVHQTKN 76
           F S+SP+ +    S+  L    +     + P  S    LC  GH++ D+D DS  ++   
Sbjct: 31  FHSASPNFKLSYSSS--LSSHQHTCTGNKTPIRSKRKWLC--GHMRRDQDIDSPSNEDNK 90

Query: 77  TTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDYLQELLAIQQQGPRSI 136
              MFG   +DE+ GTQIPTQAQS+VEGSG+V+V+EF+PV DVDYLQELLAIQQQGPR+I
Sbjct: 91  GASMFG---SDEEVGTQIPTQAQSVVEGSGAVLVSEFRPVADVDYLQELLAIQQQGPRAI 150

Query: 137 GFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILP 196
           GFFGTRNMGF+HQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILP
Sbjct: 151 GFFGTRNMGFMHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILP 210

Query: 197 QSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLL 256
           QSLKKQPPESQELLSKVKNVIEKPYNDHLPL+EASRLCNMDIISHVQQVICFAFHDS+LL
Sbjct: 211 QSLKKQPPESQELLSKVKNVIEKPYNDHLPLLEASRLCNMDIISHVQQVICFAFHDSKLL 270

Query: 257 METCQEAKNLRKIVTLFYLD 277
           METCQEAKNLRKIVTLFYLD
Sbjct: 271 METCQEAKNLRKIVTLFYLD 283

[Close]
BLAST of Cp4.1LG04g00280 vs. TrEMBL
Match: U5FWZ9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s08200g PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 3.8e-99
Identity = 191/241 (79.25%), Postives = 212/241 (87.97%), Query Frame = 1 

Query: 36  PSPNGRRRRRPPPTSLHTPLCIQGHIKGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIP 95
           P+ N     R    S   P  + GH + D++ DS+  + +N   MFG   ++E TG+QIP
Sbjct: 32  PNLNQSCLARRNSLSFSKPTWLCGHKRNDQEMDSWKAEEENIECMFG---SNEDTGSQIP 91

Query: 96  TQAQSIVEGSGSVMVTEFKPVPDVDYLQELLAIQQQGPRSIGFFGTRNMGFLHQELIEIL 155
           TQAQ+IVEGSG+V+++EFKPVPDVDYLQELLAIQQQGPRSIGFFGTRNMGF+HQELIEIL
Sbjct: 92  TQAQTIVEGSGTVVLSEFKPVPDVDYLQELLAIQQQGPRSIGFFGTRNMGFMHQELIEIL 151

Query: 156 SYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKN 215
           SYA+VITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELL+KV+N
Sbjct: 152 SYALVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLAKVQN 211

Query: 216 VIEKPYNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYL 275
           VIEKP+NDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYL
Sbjct: 212 VIEKPHNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYL 269

Query: 276 D 277
           D
Sbjct: 272 D 269

[Close]
BLAST of Cp4.1LG04g00280 vs. TrEMBL
Match: A0A151SB92_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_025976 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.1e-98
Identity = 187/220 (85.00%), Postives = 201/220 (91.36%), Query Frame = 1 

Query: 57  IQGHIKGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPV 116
           + GH+  D+D  S  ++  N   +FG   +DE+  TQIPTQAQS+VEGSGS+ +TEFKPV
Sbjct: 78  LYGHMNRDRDTYSPDYELGNGLGLFG---SDEELATQIPTQAQSVVEGSGSIRITEFKPV 137

Query: 117 PDVDYLQELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNA 176
           PDVDYLQELLAIQQQGPR+IGFFGTRNMGF+HQELIEILSYAMVITKNHIYTSGASGTNA
Sbjct: 138 PDVDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYAMVITKNHIYTSGASGTNA 197

Query: 177 AVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNM 236
           AVIRGALRAEKPELLTVILPQSL KQPPESQELLSKVKNVIEKP+NDHLPLIEASRLCNM
Sbjct: 198 AVIRGALRAEKPELLTVILPQSLSKQPPESQELLSKVKNVIEKPHNDHLPLIEASRLCNM 257

Query: 237 DIISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD 277
           DIISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD
Sbjct: 258 DIISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD 294

[Close]
BLAST of Cp4.1LG04g00280 vs. TrEMBL
Match: A0A061EZ96_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_025087 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 3.2e-98
Identity = 194/253 (76.68%), Postives = 214/253 (84.58%), Query Frame = 1 

Query: 26  FINLSNP-FLFPSPNGRR-RRRPPPTSLHTPLCIQGHIKGDKDGDSYVHQTKNTTQMFGF 85
           F++  NP F F S +      R  P S      + GH + D++ D Y ++ +N   +F  
Sbjct: 26  FLSSPNPNFTFSSHSHHSCPLRRNPHSFSKQKWLSGHARRDQEMDGYRYEEENAVCLFS- 85

Query: 86  GFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDYLQELLAIQQQGPRSIGFFGTRN 145
             +DE TGTQIPTQAQSIVEGSG+VMV+E KPVPDVDYLQELLAIQQQGPR+IGFFGTRN
Sbjct: 86  --SDEDTGTQIPTQAQSIVEGSGAVMVSELKPVPDVDYLQELLAIQQQGPRAIGFFGTRN 145

Query: 146 MGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQP 205
           MGF+HQELIEILSYA+VITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQP
Sbjct: 146 MGFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQP 205

Query: 206 PESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEA 265
           PESQELLSKVK VIEKPYNDHLPLIEASRLCN DIIS+VQQVICFAFHDS+LLMETCQEA
Sbjct: 206 PESQELLSKVKTVIEKPYNDHLPLIEASRLCNRDIISNVQQVICFAFHDSKLLMETCQEA 265

Query: 266 KNLRKIVTLFYLD 277
           K+LRKIVTLFYLD
Sbjct: 266 KSLRKIVTLFYLD 275

[Close]
BLAST of Cp4.1LG04g00280 vs. TrEMBL
Match: W9S458_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020347 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 3.2e-98
Identity = 198/252 (78.57%), Postives = 214/252 (84.92%), Query Frame = 1 

Query: 30  SNPFLFPSPNGRRRRRPPPTSLHTPLCIQGHIKGD-KDGDSYVH----QTKNTTQMFGFG 89
           S P LFP+         P  S  T LC  GH + D +D D  V       KN  +MFG  
Sbjct: 54  SCPPLFPNFVVSSSTNSPHLSRRTWLC--GHKRRDNRDRDRQVDGRTFAEKNDARMFG-- 113

Query: 90  FNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDYLQELLAIQQQGPRSIGFFGTRNM 149
            +DE  GTQIPTQAQS+V+GSG+V+V+EFKPVPDVDYLQELLAIQQQGPR+IGFFGTRNM
Sbjct: 114 -SDEDVGTQIPTQAQSLVQGSGAVLVSEFKPVPDVDYLQELLAIQQQGPRAIGFFGTRNM 173

Query: 150 GFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPP 209
           GF+HQ+LIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPP
Sbjct: 174 GFMHQQLIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPP 233

Query: 210 ESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAK 269
           ESQELLSKVKNVIEKP+NDHLPLIEASRLCNMDIISHVQQVICFAFHDS+LLMETCQEA+
Sbjct: 234 ESQELLSKVKNVIEKPHNDHLPLIEASRLCNMDIISHVQQVICFAFHDSKLLMETCQEAQ 293

Query: 270 NLRKIVTLFYLD 277
           NLRKIVTLFYLD
Sbjct: 294 NLRKIVTLFYLD 300

[Close]
BLAST of Cp4.1LG04g00280 vs. TAIR10
Match: AT3G59870.1 (AT3G59870.1 unknown protein)

HSP 1 Score: 352.4 bits (903), Expect = 2.5e-97
Identity = 178/235 (75.74%), Postives = 202/235 (85.96%), Query Frame = 1 

Query: 42  RRRRPPPTSLHTPLCIQGHIKGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSI 101
           RRRR   +S   P+C     +   D DS+V++  N T  F    +   TG +IPTQAQ+I
Sbjct: 54  RRRRSRSSSPSIPMCFPEQTRDQDDVDSWVNKEDNVTCRFDSDEDTTTTGLRIPTQAQAI 113

Query: 102 VEGSGSVMVTEFKPVPDVDYLQELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVI 161
           VEG GS+ V+E + VPDVDY+QELLAIQQQGPR+IGFFGTRNMGF+HQELI+ILSYAMVI
Sbjct: 114 VEGPGSLAVSELQRVPDVDYIQELLAIQQQGPRTIGFFGTRNMGFMHQELIQILSYAMVI 173

Query: 162 TKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPY 221
           TKNHIYTSGA+GTNAAVIRGALRAE+PELLTVILPQSLKKQPPESQELLSKV+NVIEKP+
Sbjct: 174 TKNHIYTSGAAGTNAAVIRGALRAERPELLTVILPQSLKKQPPESQELLSKVQNVIEKPH 233

Query: 222 NDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD 277
           NDHLPL+EASRLCNMDIIS VQQ+ICFAFHDS+LLMETCQEA+NLRKIVTLFYLD
Sbjct: 234 NDHLPLLEASRLCNMDIISQVQQIICFAFHDSKLLMETCQEARNLRKIVTLFYLD 288

[Close]
BLAST of Cp4.1LG04g00280 vs. TAIR10
Match: AT2G43945.1 (AT2G43945.1 unknown protein)

HSP 1 Score: 342.8 bits (878), Expect = 1.9e-94
Identity = 171/191 (89.53%), Postives = 184/191 (96.34%), Query Frame = 1 

Query: 86  NDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDYLQELLAIQQQGPRSIGFFGTRNMG 145
           +DE +G +IPTQAQ+IVEGSGSV V+E KP  DVDY+QELLAIQQQGPRSIGFFGTRNMG
Sbjct: 99  SDEDSGLRIPTQAQAIVEGSGSVAVSELKPAADVDYIQELLAIQQQGPRSIGFFGTRNMG 158

Query: 146 FLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPE 205
           F+HQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAE+PELLTVILPQSLKKQPPE
Sbjct: 159 FMHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAERPELLTVILPQSLKKQPPE 218

Query: 206 SQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAKN 265
           SQELLSKV+NV+EKP+NDHLPL+EASRLCNMDIIS VQQVICFAFHDS+LLMETCQEAKN
Sbjct: 219 SQELLSKVQNVVEKPHNDHLPLLEASRLCNMDIISQVQQVICFAFHDSKLLMETCQEAKN 278

Query: 266 LRKIVTLFYLD 277
           LRKIVTLFYLD
Sbjct: 279 LRKIVTLFYLD 289

[Close]
BLAST of Cp4.1LG04g00280 vs. NCBI nr
Match: gi|659092673|ref|XP_008447166.1| (PREDICTED: uncharacterized protein LOC103489683 isoform X1 [Cucumis melo])

HSP 1 Score: 450.7 bits (1158), Expect = 1.9e-123
Identity = 244/283 (86.22%), Postives = 256/283 (90.46%), Query Frame = 1 

Query: 1   MSCSSSSLSLCCVFFPFPSSSPS--LRFINLSNPFLFPSPN-----GRRRRRPPPTSLHT 60
           M+ SSSSLSLC +FFPFPSSS S  LRFIN+SNPF  PSPN       RRR    +SL+T
Sbjct: 1   MTSSSSSLSLC-LFFPFPSSSSSSSLRFINISNPFFSPSPNFPLLVSSRRR----SSLNT 60

Query: 61  PLCIQGHIKGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEF 120
            L I+GHI+GD DG+S V Q KNTT+MFGFG NDE TGTQIPTQAQSIVEGSGSVMV+EF
Sbjct: 61  SLWIRGHIRGDTDGESSVPQKKNTTRMFGFGSNDE-TGTQIPTQAQSIVEGSGSVMVSEF 120

Query: 121 KPVPDVDYLQELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASG 180
           KPVPDVDYLQELLAIQQQGPR+IGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASG
Sbjct: 121 KPVPDVDYLQELLAIQQQGPRAIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASG 180

Query: 181 TNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRL 240
           TNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKP+NDHL LIEASRL
Sbjct: 181 TNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPHNDHLSLIEASRL 240

Query: 241 CNMDIISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD 277
           CNMDIISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD
Sbjct: 241 CNMDIISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD 277

[Close]
BLAST of Cp4.1LG04g00280 vs. NCBI nr
Match: gi|449444096|ref|XP_004139811.1| (PREDICTED: uncharacterized protein LOC101209189 isoform X1 [Cucumis sativus])

HSP 1 Score: 446.4 bits (1147), Expect = 3.5e-122
Identity = 241/279 (86.38%), Postives = 252/279 (90.32%), Query Frame = 1 

Query: 4   SSSSLSLCCVFFPFPSSSPS-LRFINLSNPFLFPSPN-----GRRRRRPPPTSLHTPLCI 63
           SSSSLSLC +FFPFPSSS S LRFIN+SNPF  PSPN       RRR    +SL+T L I
Sbjct: 3   SSSSLSLC-LFFPFPSSSSSSLRFINISNPFFSPSPNFPLFVSSRRR----SSLNTSLWI 62

Query: 64  QGHIKGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVP 123
           +GHI+GD DGDS V Q  NT +MFGFG NDE TGTQIPTQAQSIVEGSGSVMV+EFKPVP
Sbjct: 63  RGHIRGDTDGDSSVPQKNNTMRMFGFGSNDE-TGTQIPTQAQSIVEGSGSVMVSEFKPVP 122

Query: 124 DVDYLQELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAA 183
           DVDYLQELLAIQQQGPR+IGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAA
Sbjct: 123 DVDYLQELLAIQQQGPRAIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAA 182

Query: 184 VIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMD 243
           VIRGALRAEKPELLTVILPQSLKKQPPESQELLSKV+NVIEKP+NDHL LIEASRLCNMD
Sbjct: 183 VIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVRNVIEKPHNDHLSLIEASRLCNMD 242

Query: 244 IISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD 277
           IISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD
Sbjct: 243 IISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD 275

[Close]
BLAST of Cp4.1LG04g00280 vs. NCBI nr
Match: gi|359478235|ref|XP_002275901.2| (PREDICTED: uncharacterized protein LOC100242287 [Vitis vinifera])

HSP 1 Score: 373.2 bits (957), Expect = 3.8e-100
Identity = 205/280 (73.21%), Postives = 227/280 (81.07%), Query Frame = 1 

Query: 5   SSSLSLCCVFFPFPSSSPSLRFINLSNPF----LFPSPNGRRRRRPPP----TSLHTPLC 64
           SS  S   +FF  PS S S    N  NPF     F S    RR  P      +S H  +C
Sbjct: 23  SSFSSKSLIFFQSPSPSLSSPSPNPFNPFPSYYSFSSSQSHRRCVPEKGSSLSSRHKWIC 82

Query: 65  IQGHIKGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPV 124
             GH++ D+DG S+  + +N  ++F    +DE+  +Q+PTQAQS+VEGSG+V+V+EFKPV
Sbjct: 83  --GHMRKDQDGGSWRDEEENPGRIF---CSDEEVASQVPTQAQSLVEGSGAVLVSEFKPV 142

Query: 125 PDVDYLQELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNA 184
           PDVDYLQELLAIQQQGPR+IGFFGTRNMGF HQELIEILSYAMVITKNHI+TSGASGTNA
Sbjct: 143 PDVDYLQELLAIQQQGPRAIGFFGTRNMGFTHQELIEILSYAMVITKNHIFTSGASGTNA 202

Query: 185 AVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNM 244
           AVIRGALRAEKPELLTVILPQSLK QPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNM
Sbjct: 203 AVIRGALRAEKPELLTVILPQSLKMQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNM 262

Query: 245 DIISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD 277
           DIISHVQQVICFAFHDS+LLMETCQEAKNLRKIVTLFYLD
Sbjct: 263 DIISHVQQVICFAFHDSKLLMETCQEAKNLRKIVTLFYLD 297

[Close]
BLAST of Cp4.1LG04g00280 vs. NCBI nr
Match: gi|694380215|ref|XP_009366254.1| (PREDICTED: uncharacterized protein LOC103956044 isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 372.5 bits (955), Expect = 6.5e-100
Identity = 204/272 (75.00%), Postives = 224/272 (82.35%), Query Frame = 1 

Query: 5   SSSLSLCCVFFPFPSSSPSLRFINLSNPFLFPSPNGRRRRRPPPTSLHTPLCIQGHIKGD 64
           SSS   C  F  F S+SP+    +LS+       +   R+R    S    LC  GH++ D
Sbjct: 21  SSSHFPCKSFKSFHSASPNFNLSSLSS-----HNHSCTRQRTTTRSERKWLC--GHLRRD 80

Query: 65  KDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDYLQE 124
           +D DS  ++      MFG   +DE+ GTQIPTQAQS+VEGSG+VMV+EF+PV DVDYLQE
Sbjct: 81  QDIDSRSNEDATGASMFG---SDEEVGTQIPTQAQSVVEGSGAVMVSEFRPVADVDYLQE 140

Query: 125 LLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALR 184
           LLAIQQQGPR+IGFFGTRNMGF+HQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALR
Sbjct: 141 LLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALR 200

Query: 185 AEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHVQQ 244
           AEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKP NDHLPLIEASRLCNM+IISHVQQ
Sbjct: 201 AEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPQNDHLPLIEASRLCNMNIISHVQQ 260

Query: 245 VICFAFHDSRLLMETCQEAKNLRKIVTLFYLD 277
           VICFAFHDSRLLMETCQEAKNLRKIVTLFYLD
Sbjct: 261 VICFAFHDSRLLMETCQEAKNLRKIVTLFYLD 282

[Close]
BLAST of Cp4.1LG04g00280 vs. NCBI nr
Match: gi|645275966|ref|XP_008243065.1| (PREDICTED: uncharacterized protein LOC103341338 isoform X1 [Prunus mume])

HSP 1 Score: 371.7 bits (953), Expect = 1.1e-99
Identity = 191/232 (82.33%), Postives = 208/232 (89.66%), Query Frame = 1 

Query: 45  RPPPTSLHTPLCIQGHIKGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEG 104
           + P  S    LC  GH++ D+D DS  ++      MFG   +DE+ GTQIPTQAQS+VEG
Sbjct: 57  KTPIRSKRKWLC--GHMRRDQDRDSPSNEDNKGASMFG---SDEEVGTQIPTQAQSVVEG 116

Query: 105 SGSVMVTEFKPVPDVDYLQELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVITKN 164
           SG+V+V+EF+PV DVDYLQELLAIQQQGPR+IGFFGTRNMGF+HQELIEILSYAMVITKN
Sbjct: 117 SGAVLVSEFRPVADVDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYAMVITKN 176

Query: 165 HIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDH 224
           HIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDH
Sbjct: 177 HIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDH 236

Query: 225 LPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD 277
           LPL+EASRLCNMDIISHVQQVICFAFHDS+LLMETCQEAKNLRKIVTLFYLD
Sbjct: 237 LPLLEASRLCNMDIISHVQQVICFAFHDSKLLMETCQEAKNLRKIVTLFYLD 283

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g00280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG04g00280 vs. TrEMBL
Match NameE-valueIdentityDescription
M5VQR9_PRUPE3.8e-9975.77Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009659mg PE=4 SV=1[more]
U5FWZ9_POPTR3.8e-9979.25Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s08200g PE=4 SV=1[more]
A0A151SB92_CAJCA1.1e-9885.00Uncharacterized protein OS=Cajanus cajan GN=KK1_025976 PE=4 SV=1[more]
A0A061EZ96_THECC3.2e-9876.68Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_025087 PE=4 SV=1[more]
W9S458_9ROSA3.2e-9878.57Uncharacterized protein OS=Morus notabilis GN=L484_020347 PE=4 SV=1[more]
BLAST of Cp4.1LG04g00280 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G59870.12.5e-9775.74 unknown protein[more]
AT2G43945.11.9e-9489.53 unknown protein[more]
BLAST of Cp4.1LG04g00280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659092673|ref|XP_008447166.1|1.9e-12386.22PREDICTED: uncharacterized protein LOC103489683 isoform X1 [Cucumis melo][more]
gi|449444096|ref|XP_004139811.1|3.5e-12286.38PREDICTED: uncharacterized protein LOC101209189 isoform X1 [Cucumis sativus][more]
gi|359478235|ref|XP_002275901.2|3.8e-10073.21PREDICTED: uncharacterized protein LOC100242287 [Vitis vinifera][more]
gi|694380215|ref|XP_009366254.1|6.5e-10075.00PREDICTED: uncharacterized protein LOC103956044 isoform X1 [Pyrus x bretschneide... [more]
gi|645275966|ref|XP_008243065.1|1.1e-9982.33PREDICTED: uncharacterized protein LOC103341338 isoform X1 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g00280.1Cp4.1LG04g00280.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR32183FAMILY NOT NAMEDcoord: 57..276
score: 3.9E
NoneNo IPR availablePANTHERPTHR32183:SF3SUBFAMILY NOT NAMEDcoord: 57..276
score: 3.9E
NoneNo IPR availableunknownSSF102405MCP/YpsA-likecoord: 127..248
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g00280CmaCh11G011620Cucurbita maxima (Rimu)cmacpeB147
Cp4.1LG04g00280CmoCh11G012040Cucurbita moschata (Rifu)cmocpeB127
Cp4.1LG04g00280Carg26979Silver-seed gourdcarcpeB1154
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None