CmoCh11G012040 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh11G012040
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCysteine sulfinate desulfinase/cysteine desulfurase and related enzymes
LocationCmo_Chr11 : 7102299 .. 7109349 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATCTGGAAGAGAGCAAAGCAAAGCGAAATAACTTTTGTTGAGACAGAGAGAGAGAGAGACAGAGAGAGACAGAGAGGTCCAGAGGATGAGTTGTTCTTCATCTTTATCCCTCTGCTGCGTCTTCTTCCCTTTCCCCTCTCCTTCCCCTTCTCTTAGATTCATTAACATTTCCAATCCCTTCTTCTTCCCAAGCCCTAATGGACGCCGCCGCCGCCCTCCTCCTACTTCTCTCCATTCACCTCTGGTAACTTCTCCCTCTCTATTTCCGCATACGCTTTTCTTGTTTTCTTTTATCTCTTTCTTTTATGTTTTTCCATTTTCCTGCTCTTGTTGTTGTTGTTGTTGTTGTTCTGTTCTTGTTTTGTGGCTGACGGGATTTTGATTGCTTTGTCTTGCCAAATGTCTTGTTCCAATGAATGACTCTCCGTACTTGCCAGAATTATGTAGGTTTCTTTACGAATTTTGCGTTATTTACTTGGAGGTACTCGTCTTTTTGTGTTTATTATGCTCAAGAAGTTCGTTGGTTTTTTATGCCCTAAAATTGTAGCAAAGAAAAGAAGATGCGTGATTATTGAGAAATAGAGAGGATTATTTGCTAGATATTGAAATTGATTGTTGAGAGCAGTTGTTTATCAACTGTTGAAGACGACGGGTAGGTAATCTGGAGTTCGCTTCATACAAACGATTTTTCTTCAATTTAAACCCTAACGTAATTGTAAAGTGGGTTTAGGATATTCATTGGTGCTCCTGGGGTTGGTTGAGTGCCGATTACAAATCGAATGTATGGAACTACAGCAATGACAGTTGAGAAAAGATGATCCTGTGCTTTTCACTCTTTCTTCAAAGGGCATATCACCCCAGAAAAATTACACCAAAAGGGCAGGGAAGCATTAGACCCTTGAGATCCCAAAAGAAATGGTTTGACTTTCTTCGGGTGTTTCCAAATCATATTGTAAAGAAGATAACTCTCACTCTTCCCCTTGATCCTCAAGTCTATAAGAAAAGAGCTCACTTAGCTGCCATCCAGATCTCATCCAAGTCCAATGATTGACGAGTTTGTTAGGTTGGAAATCTGCCAAAATATGAGATAGGATGCCCTTCAAGAATGTCATCATCCTTGTGACTTTTCCTTATGCCAAGATTCCAGCTTCTGTTTGAAGAAATCTACGGGCTTTTGATGGATGATACTTTTTGGCTTGGTAAAGAATGAAGTCTCATAATTGCTTTAGCAAAAGGCACAATGTCCTACTAAAGATCTTCCCAAAAGTATGTTGAAGAGCCAAAGCCTACTGCCACTTTCATTTTGAGCAAATGAGGTTTTTGAGCTTGAGAGTATCTTTCCAAGAGCCTTTTGGAGAATGAAGAAAGAGTGTCCGACCTTTTTTCCAAAATTGGAAGCCAAATTTTTCCTCAATGATCTTCCTCCAAACGTATGTTGAAGGTTTCTCGTTATTTTTTTTTTAAATAAAGAAAGATATATTTATCAAAAGAGAAACAACCCAAGGACGAAGGGGCAAGGAGCTCCCTCCCACAAAAACTAATGAAGCACTGCCTCCCAATTCTTTTGTAACAAGTACTATAGTTGCAAAAGAATTTATTGTTTCTAGAACACTGCAAATAAAATGTAATTTGTACACTATTACAAAACAAAACATAAGAATTGGGCCTATCCTTAAAGATTCTCCTATTTCTTTCCTACTGAATCTCCCGAACAAGCGCCCGAGCAACACATCTCCACAAAAAAAACAATTGCCTTGCCCTTAAGCTTCTAGCCATTAAGAGCTTCTACCAACCCCTCATTCCAACTTCTAAGGACGACACACTACGACCAAAAGCTTTAAGGCACTGATCTCTCCCTCTCCCTGCAAAGTGGCAACTAAGAAAAACCTTGAACTGTTTTTATCTAGAGCATAGCAAAACCTTGAACTGTTAATTTCGTTAGTAGACTTGATAAGTTGATGAAATAGGCATCTCCTTTAGGGTTCTGTTTTAACAGCGACAATAAATATGGGGTCGCACATGTCAAATTTTATATGAAAGAAAGAGGGGAAAACATGGAAAAATGCACTTAGTTGGATATAGTTTCTAATAATAATTTACACTTTGGGATGGATTAACTCATAAACTATCACTAACGTTATAACTAGCAATCTGGAAATTTGCATCCAAACTCAACACATTGTCATCCCTTGAGCAAGTGCTCTATTAGATAGATGATATCTGTCTTTCTCAAAACTGATAGTTACTTAAGCCGTCCAAACAATTGTTTTGTCTTCTACATAATTGTAAGACAACCACTAGTTCATAAAATCAAAAGCAAGGAAATTTCATGATTCAACAAGATTCTGGAGAAAACATCCAACTTCTGAGGGGAAAAGATCCTAAAACTGTCAATTTCTTTCATCCTTTTCCTAATGCATGCCGCACATGCATTCATTTTGACAGTTTGTCCCTTTTTTCTATTAGTTTTTTTTGGTTGGATAAGCAGAGTTATGAAGAGAGGAAGGAAACTTCCAACCACCCATGGTGGATTACAAAAATGATCACCAATCAGCCCAAAGATCAATGATTCGATCCTACACCCCGCTATCGTTGAACTCAAAAAACAAACAATATATTGCCAAATAGAGACTTGAGACATAATCAAATAATCTTTAAATTTTGATGTTCATTTGCACAAATAAAAAGTAGAAAAGGGATGGTATCGGTAACACTAAGAAAATTAGTCTCCAAACCATGAAAACCTGATTATTTGGTGCCACAAACTCCACAAAAAAGGCCTAGTTATGGACCACCAGAGCAACTTCTTGGTCTTCTTAAAAGGATGATGCACAAAGGAGATTCTTTAAGTGGGTAAACTATTTTCTATTACTAGAATAGACTTCCACAACGATTGGGCAAGAATTTTTTAAACCCTTAACTGCTGGAGGAGTTTCACTATTTATCCCTTCCTCCCTAATAAAGCCCTTTTGTTGTGTCCCACGACAAGTATGCAAGGCTATGAGCCACAAATGTAGGGTGGATTACTTTTGGAGCCTTTAAAATGAAGTTAGAAAGATGGGACCCCTTTGAGGCGCAGGAGAACTACAGTGGTCCCCTCTTACGGGGATTGGATAAATTTCAGAAACATTCCCCTGCATTTATGGAGCCGAGCCACATTCAAGGCAATAGGTGATTGCTTTGCGGTCTTGTGGACTGTGCAGATCAAAACTCTTCCCTCATTGAGTGCTTAGTAGTTGCTATTAAGTGGACTGTGCAGATCAAAACTCTTCCCTCATTGAGTGCTTAGTAGTTGCTATTAAAGTGCAAGGGAATTACTGTGGATTCATCCTCGCTGAAGTGAAAACTTCTTAATAGAGACCAGGTGTTTTCCACCCATGTGAGTACGCTCCAATTTGGCTGGTTGTTGGCCAAAAAGAAAGTTGAAGTTCATGGTGGGTTTTCATCTGAAGCAGCCACAAGGTCAGGTCCTAACTCGATAGATTTGTGGAGGTTAAGGGAAGATTTCTTTTACCCATCAGACACTATTTTTTTACCCGGAGAAGACTGCTTGCACACCCCCCATGACTATTAAGGTTAAGGGGAGAGGTTTCAGGCTTTAGCCCAAATTTGAATCACATGCCTAATAGGACTGCTTGCACACCCCCCATGATAGTCTTCCCTCAAGCTTCACACGAATGTAGACACCACTGCCAGGCAAAGTAGTAGCAGTCCTTTGCATTAGTGGGCCTTTCCAGATTTGTCCTCTAAATTCAAAAAGCAGACAGATGGAGGAAAGGGCAAAATCAGTTGAATTTGTGGAAGATTTAGAGACAGATCCTAGAAAGTCATTTCTGAAAAGAAGAAAGGGGAAATTTTGCTCTATAACCAATACCCAGGCTGAGTTTTCTAATAAACCATTTGGAAAAGCTAGGTGATTAAAAAGATATGTTCTCCGAGGTTTCTATTTCCAGCCAAGAAGAGGGCAGAGAGGTAGAGGATTGCATAGAGATCCCTGAGAATTATCAGGTTTGTTTTCAAGGAAATGACGTTTTCCCTTTATCAAAGATAAATTACAGATGTTGTTATATTTTTTTTTCTATAAAGTTCAGTAGTTGACCCATTCATAAGATAAATTTATATTCATTTTGAACAGTAACAAAGTCAACTTTCATTAATGAATATACAAAAGAAAAGGAATGACAGTCTCATCTCCTGGACTTCTGAAGTACGACAAATTCTTCCAATTGGATCATAAAGAGGAAATGAAGGGCATAATCACAAAAAGTGGGGAGCTATTTACACCATGAGAAGGGAAAAAAAAAAAAAAAAAAATCAGATTCTCTATGAAACTATCCAAAATTTAGTGTCAGAACATGCAATTTGTTCCTTTTTAGCAATTGGTCCCAAAACACCTTTCTTTTCTTAAAAAGTATTAACATAATTTTTTTCTTCGTTATTATTATTTGTTGATTGTTGCGGATGGCTGAGGATTTTACCCATGCATTGTCAAGATCCAAAAACTATGGCTGAAAATATTGAATTTTGATCGAATATGGTTGACACAGACCTAATCTTAGTTGTCAATCAACCATGGTTATACTTGTAGTTCTAGCAAGAACATAATTCTAGAACAACTTTTATGGAATCGAACTTATCCATTATACCATCTAAATGCTGATGTCATGTAAATATTTCTAGTGTAGATTAATTTGTTTGCATGGCGTGTTTTAGGTATCAAAGTTGATAACAACTTGTGATTAACTTGGTATTTTCTGTAATTGATTTGTCCTTGATGACTTATGATGATTAGTCAGCTTCATAGATCTTTGCATCTGTCATTTGCAATGCCAATCATTGATTCTCTTTTGGAACATTGATGCTCTTATCTTGTTAGGTTATCTGAACAGATTTTTATTCCCAGTTGACTTGATTCACTTCAACCTTCTAATTGGAACTTTTGTTCAGTATTGATACTATTTTAGAGTTGGCATGGATAAAATAGCGAGTTTCTACTTCACCACATTTGTGGGCAGTTGGTTTTCACTAATGATTTACTATCAGGGGATCTTTTTTATGTACTGGTTATAGTGCATCCAAGGGCATATAAAAGGAGATAAAGATGGAGATAGTTACGTGCATCAGACGAAGAATACAACGCAGATGTTTGGATTTGGGTTTAATGATGAGAAGACGGGCACTCAAATTCCAACCCAGGCTCAGTCCATAGTGGAAGGATCAGGATCAGTTATGGTGACTGAGTTCAAACCAGTTCCTGATGTTGATTATCTACAGGTGAGTGATAAGATACGATCATTTCGAATACTTATGTTGGATGTTGGCCATCTCCTAAAAAAAGATGATTAAAAGGAAAATGGACTATATTTTTCTTCCAATGCATTTCGAATCTGAAGTTTTTTTTCCTGCATGACTTGAGCATTTGCAAATGTTAGAATTTCCTGAGGAAGTAATTCTTTTGGGTGACCTTTTATAAAGCTTTAAGTCTTAGCTCTTAGTGCCCACAATTTCTCGATTTCAATGCTTGCGTGAAGCTCCTTTCAAGTCACAATGTGTTTTTATTTTCACAGGAGTTATTGGCCATTCAACAACAAGGTCCTAGATCCATTGGTTTCTTTGGAACTCGGAATATGGGTTTCTTGCATCAAGAACTCATCGAGATTCTTAGCTATGCAATGGTTATAACGGTAGGATATGTGGTCTAATGTCAATGATTATACTGAAGGGCTATTTGGTTTTTGATGAGTACATAAACTTCATATTGCTTGATAACTTCTGTATGCAGAAAAACCACATCTATACTTCAGGAGCATCTGGAACCAATGCAGCAGTTATCAGAGGTGCATTGAGGGCTGAGAAACCAGAACTGCTTACTGTCATTCTGCCACAAAGTTTGAAGAAACAACCTCCTGAGAGCCAGGAACTATTGTCCAAAGTAAGTTTGTTGATGAGTTCAATTGGGTTGGTGGTCTGTTATGTTCATTTAATTATTTATCTATCATGATTATCTTGGCATTTGTAGGTTAAGAATGTGATAGAGAAGCCCTACAACGATCATCTACCTTTAATAGAAGCTAGCAGGTAGCTTTGCGTGTAAATGTATTATCACATTGTTTTAAAAAAAACCCTTATTTCTGCTATATTCATGATCGTTCATGAAAGTCGTCGTAAAGTTATTTTCCAACGACATACCTCAGGTTGCAACACAAGTTAAAATCAAATGAGATAATGGAATTTTGGTGTATCTTTGCTTGTAAATGTATATCATTACATTGTTTTCAAAATGTTTCAAGTTTGAATGTTCCATCTAATGCCTTTGTTGAAAGTTGCAGGTTATGCAATATGGACATCATTTCGCATGTACAGCAAGTCATTTGCTTTGCATTTCATGATAGTAGGTTGCTCATGGAAACTTGTCAAGAGGCAAAAAATCTCCGAAAAATCGTTACCCTTTTTTATCTCGACTAAGAATAAGAAGAAACTTCTCCAAATTCTGTAAATACATTGTTTGACAGAGATTATTACATATTTTCCCTAATTTTGCTTGTAAAGTTGCTGCTCCTGCCTGCTCAAAGAGGGCCAATTTCCCTTTCCAAACCTTACTGTTCAAATCAGGAATTCTGCAGTGGTAAGTACATTTACAGATTAGAATTCTCAAAAATTTTCAGATCAAGATTTATGAGGAGGAATGTTTTGAGTTTGTGTTTGGTAAATGAGAAAGTTGGTGTTCATAAAACGTTTAAAGCCTAAAACGTCTGTGGGTATTGATATCATCCAATTGAGTAGTTCTTAATGATAGATAAATGGAAATAAAGTTACAATGCTTTTACGAAAACACAATGCATTTATTTGCTTGTTCTAATGAAAGGGGCATTGATATCAAAACTTTCAAGTCTAAAACCAAATAGAGATGAATTGTCGCGACAACCATAAAAAAAAAAAAAACAAAACAGAACACGTTAGGCTATAGTGTTTTCATTAGAAGAATGTAAACACAAGAAAAGGAGAAAAACTCTTGCTGTGCCAACGTAGAACGAACACTGAGAAATAA

mRNA sequence

AAAATCTGGAAGAGAGCAAAGCAAAGCGAAATAACTTTTGTTGAGACAGAGAGAGAGAGAGACAGAGAGAGACAGAGAGGTCCAGAGGATGAGTTGTTCTTCATCTTTATCCCTCTGCTGCGTCTTCTTCCCTTTCCCCTCTCCTTCCCCTTCTCTTAGATTCATTAACATTTCCAATCCCTTCTTCTTCCCAAGCCCTAATGGACGCCGCCGCCGCCCTCCTCCTACTTCTCTCCATTCACCTCTGTGCATCCAAGGGCATATAAAAGGAGATAAAGATGGAGATAGTTACGTGCATCAGACGAAGAATACAACGCAGATGTTTGGATTTGGGTTTAATGATGAGAAGACGGGCACTCAAATTCCAACCCAGGCTCAGTCCATAGTGGAAGGATCAGGATCAGTTATGGTGACTGAGTTCAAACCAGTTCCTGATGTTGATTATCTACAGGAGTTATTGGCCATTCAACAACAAGGTCCTAGATCCATTGGTTTCTTTGGAACTCGGAATATGGGTTTCTTGCATCAAGAACTCATCGAGATTCTTAGCTATGCAATGGTTATAACGAAAAACCACATCTATACTTCAGGAGCATCTGGAACCAATGCAGCAGTTATCAGAGGTGCATTGAGGGCTGAGAAACCAGAACTGCTTACTGTCATTCTGCCACAAAGTTTGAAGAAACAACCTCCTGAGAGCCAGGAACTATTGTCCAAAGTTAAGAATGTGATAGAGAAGCCCTACAACGATCATCTACCTTTAATAGAAGCTAGCAGGTTATGCAATATGGACATCATTTCGCATGTACAGCAAGTCATTTGCTTTGCATTTCATGATAGTAGGTTGCTCATGGAAACTTGTCAAGAGGCAAAAAATCTCCGAAAAATCAGATTATTACATATTTTCCCTAATTTTGCTTGTAAAGTTGCTGCTCCTGCCTGCTCAAAGAGGGCCAATTTCCCTTTCCAAACCTTACTGTTCAAATCAGGAATTCTGCAGTGTTACAATGCTTTTACGAAAACACAATGCATTTATTTGCTTGTTCTAATGAAAGGGGCATTGATATCAAAACTTTCAAGTCTAAAACCAAATAGAGATGAATTAAAAGGAGAAAAACTCTTGCTGTGCCAACGTAGAACGAACACTGAGAAATAA

Coding sequence (CDS)

ATGAGTTGTTCTTCATCTTTATCCCTCTGCTGCGTCTTCTTCCCTTTCCCCTCTCCTTCCCCTTCTCTTAGATTCATTAACATTTCCAATCCCTTCTTCTTCCCAAGCCCTAATGGACGCCGCCGCCGCCCTCCTCCTACTTCTCTCCATTCACCTCTGTGCATCCAAGGGCATATAAAAGGAGATAAAGATGGAGATAGTTACGTGCATCAGACGAAGAATACAACGCAGATGTTTGGATTTGGGTTTAATGATGAGAAGACGGGCACTCAAATTCCAACCCAGGCTCAGTCCATAGTGGAAGGATCAGGATCAGTTATGGTGACTGAGTTCAAACCAGTTCCTGATGTTGATTATCTACAGGAGTTATTGGCCATTCAACAACAAGGTCCTAGATCCATTGGTTTCTTTGGAACTCGGAATATGGGTTTCTTGCATCAAGAACTCATCGAGATTCTTAGCTATGCAATGGTTATAACGAAAAACCACATCTATACTTCAGGAGCATCTGGAACCAATGCAGCAGTTATCAGAGGTGCATTGAGGGCTGAGAAACCAGAACTGCTTACTGTCATTCTGCCACAAAGTTTGAAGAAACAACCTCCTGAGAGCCAGGAACTATTGTCCAAAGTTAAGAATGTGATAGAGAAGCCCTACAACGATCATCTACCTTTAATAGAAGCTAGCAGGTTATGCAATATGGACATCATTTCGCATGTACAGCAAGTCATTTGCTTTGCATTTCATGATAGTAGGTTGCTCATGGAAACTTGTCAAGAGGCAAAAAATCTCCGAAAAATCAGATTATTACATATTTTCCCTAATTTTGCTTGTAAAGTTGCTGCTCCTGCCTGCTCAAAGAGGGCCAATTTCCCTTTCCAAACCTTACTGTTCAAATCAGGAATTCTGCAGTGTTACAATGCTTTTACGAAAACACAATGCATTTATTTGCTTGTTCTAATGAAAGGGGCATTGATATCAAAACTTTCAAGTCTAAAACCAAATAGAGATGAATTAAAAGGAGAAAAACTCTTGCTGTGCCAACGTAGAACGAACACTGAGAAATAA
Homology
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BLAST of CmoCh11G012040 vs. TrEMBL
Match: U5FWZ9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s08200g PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 1.1e-95
Identity = 191/249 (76.71%), Postives = 211/249 (84.74%), Query Frame = 1 

Query: 19  PSPSLRFINISNPFFFPSPNGRRRRPPPTSLHSPLCIQGHIKGDKDGDSYVHQTKNTTQM 78
           PS SLR   I N     S   RR      S   P  + GH + D++ DS+  + +N   M
Sbjct: 22  PSKSLRTTTIPN--LNQSCLARRNS---LSFSKPTWLCGHKRNDQEMDSWKAEEENIECM 81

Query: 79  FGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDYLQELLAIQQQGPRSIGFFG 138
           FG   ++E TG+QIPTQAQ+IVEGSG+V+++EFKPVPDVDYLQELLAIQQQGPRSIGFFG
Sbjct: 82  FG---SNEDTGSQIPTQAQTIVEGSGTVVLSEFKPVPDVDYLQELLAIQQQGPRSIGFFG 141

Query: 139 TRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLK 198
           TRNMGF+HQELIEILSYA+VITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLK
Sbjct: 142 TRNMGFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLK 201

Query: 199 KQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETC 258
           KQPPESQELL+KV+NVIEKP+NDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETC
Sbjct: 202 KQPPESQELLAKVQNVIEKPHNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETC 261

Query: 259 QEAKNLRKI 268
           QEAKNLRKI
Sbjct: 262 QEAKNLRKI 262

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BLAST of CmoCh11G012040 vs. TrEMBL
Match: M5VQR9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009659mg PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 3.3e-95
Identity = 191/258 (74.03%), Postives = 213/258 (82.56%), Query Frame = 1 

Query: 19  PSPSLRFINISNPFFFPSPNGRR---------RRPPPTSLHSPLCIQGHIKGDKDGDSYV 78
           PS SL+  + ++P F  S +             + P  S    LC  GH++ D+D DS  
Sbjct: 24  PSKSLKSFHSASPNFKLSYSSSLSSHQHTCTGNKTPIRSKRKWLC--GHMRRDQDIDSPS 83

Query: 79  HQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDYLQELLAIQQQ 138
           ++      MFG   +DE+ GTQIPTQAQS+VEGSG+V+V+EF+PV DVDYLQELLAIQQQ
Sbjct: 84  NEDNKGASMFG---SDEEVGTQIPTQAQSVVEGSGAVLVSEFRPVADVDYLQELLAIQQQ 143

Query: 139 GPRSIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELL 198
           GPR+IGFFGTRNMGF+HQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELL
Sbjct: 144 GPRAIGFFGTRNMGFMHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELL 203

Query: 199 TVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHVQQVICFAFH 258
           TVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPL+EASRLCNMDIISHVQQVICFAFH
Sbjct: 204 TVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPLLEASRLCNMDIISHVQQVICFAFH 263

Query: 259 DSRLLMETCQEAKNLRKI 268
           DS+LLMETCQEAKNLRKI
Sbjct: 264 DSKLLMETCQEAKNLRKI 276

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BLAST of CmoCh11G012040 vs. TrEMBL
Match: A0A061EZ96_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_025087 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 4.3e-95
Identity = 188/253 (74.31%), Postives = 209/253 (82.61%), Query Frame = 1 

Query: 18  SPSPSLRFINISNPFFFPSPNGRRRRP---PPTSLHSPLCIQGHIKGDKDGDSYVHQTKN 77
           +PS    F++  NP F  S +     P    P S      + GH + D++ D Y ++ +N
Sbjct: 19  TPSYCSAFLSSPNPNFTFSSHSHHSCPLRRNPHSFSKQKWLSGHARRDQEMDGYRYEEEN 78

Query: 78  TTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDYLQELLAIQQQGPRSI 137
              +F    +DE TGTQIPTQAQSIVEGSG+VMV+E KPVPDVDYLQELLAIQQQGPR+I
Sbjct: 79  AVCLFS---SDEDTGTQIPTQAQSIVEGSGAVMVSELKPVPDVDYLQELLAIQQQGPRAI 138

Query: 138 GFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILP 197
           GFFGTRNMGF+HQELIEILSYA+VITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILP
Sbjct: 139 GFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILP 198

Query: 198 QSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLL 257
           QSLKKQPPESQELLSKVK VIEKPYNDHLPLIEASRLCN DIIS+VQQVICFAFHDS+LL
Sbjct: 199 QSLKKQPPESQELLSKVKTVIEKPYNDHLPLIEASRLCNRDIISNVQQVICFAFHDSKLL 258

Query: 258 METCQEAKNLRKI 268
           METCQEAK+LRKI
Sbjct: 259 METCQEAKSLRKI 268

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BLAST of CmoCh11G012040 vs. TrEMBL
Match: V4SMK8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012405mg PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 4.3e-95
Identity = 189/250 (75.60%), Postives = 210/250 (84.00%), Query Frame = 1 

Query: 18  SPSPSLRFINISNPFFFPSPNGRRRRPPPTSLHSPLCIQGHIKGDKDGDSYVHQTKNTTQ 77
           SP+P+  F   S+      P     RP  T   + LC  G+++ D+D D    + +N   
Sbjct: 38  SPNPNFNFFTFSS-----HPTQHSWRPRRTK-KTWLC--GNMRKDQDMDGLRSEEENVIG 97

Query: 78  MFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDYLQELLAIQQQGPRSIGFF 137
           MFG   +DE  GTQIPTQAQS+VEGSG+VMV+EFKPVPDVDYLQELLAIQQQGPR+IGFF
Sbjct: 98  MFG---SDEDVGTQIPTQAQSVVEGSGAVMVSEFKPVPDVDYLQELLAIQQQGPRAIGFF 157

Query: 138 GTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSL 197
           GTRNMGF+HQELIEILSYA+VITKNHIYTSGASGTNAAVIRGALRAE+P+LLTVILPQSL
Sbjct: 158 GTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSL 217

Query: 198 KKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMET 257
           KKQPPESQELL+KVK VIEKP+NDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMET
Sbjct: 218 KKQPPESQELLAKVKTVIEKPHNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMET 276

Query: 258 CQEAKNLRKI 268
           CQEAKNLRKI
Sbjct: 278 CQEAKNLRKI 276

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BLAST of CmoCh11G012040 vs. TrEMBL
Match: A0A151SB92_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_025976 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 2.1e-94
Identity = 180/213 (84.51%), Postives = 194/213 (91.08%), Query Frame = 1 

Query: 55  IQGHIKGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPV 114
           + GH+  D+D  S  ++  N   +FG   +DE+  TQIPTQAQS+VEGSGS+ +TEFKPV
Sbjct: 78  LYGHMNRDRDTYSPDYELGNGLGLFG---SDEELATQIPTQAQSVVEGSGSIRITEFKPV 137

Query: 115 PDVDYLQELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNA 174
           PDVDYLQELLAIQQQGPR+IGFFGTRNMGF+HQELIEILSYAMVITKNHIYTSGASGTNA
Sbjct: 138 PDVDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYAMVITKNHIYTSGASGTNA 197

Query: 175 AVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNM 234
           AVIRGALRAEKPELLTVILPQSL KQPPESQELLSKVKNVIEKP+NDHLPLIEASRLCNM
Sbjct: 198 AVIRGALRAEKPELLTVILPQSLSKQPPESQELLSKVKNVIEKPHNDHLPLIEASRLCNM 257

Query: 235 DIISHVQQVICFAFHDSRLLMETCQEAKNLRKI 268
           DIISHVQQVICFAFHDSRLLMETCQEAKNLRKI
Sbjct: 258 DIISHVQQVICFAFHDSRLLMETCQEAKNLRKI 287

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BLAST of CmoCh11G012040 vs. TAIR10
Match: AT3G59870.1 (AT3G59870.1 unknown protein)

HSP 1 Score: 338.6 bits (867), Expect = 4.7e-93
Identity = 171/228 (75.00%), Postives = 195/228 (85.53%), Query Frame = 1 

Query: 40  RRRRPPPTSLHSPLCIQGHIKGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSI 99
           RRRR   +S   P+C     +   D DS+V++  N T  F    +   TG +IPTQAQ+I
Sbjct: 54  RRRRSRSSSPSIPMCFPEQTRDQDDVDSWVNKEDNVTCRFDSDEDTTTTGLRIPTQAQAI 113

Query: 100 VEGSGSVMVTEFKPVPDVDYLQELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVI 159
           VEG GS+ V+E + VPDVDY+QELLAIQQQGPR+IGFFGTRNMGF+HQELI+ILSYAMVI
Sbjct: 114 VEGPGSLAVSELQRVPDVDYIQELLAIQQQGPRTIGFFGTRNMGFMHQELIQILSYAMVI 173

Query: 160 TKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPY 219
           TKNHIYTSGA+GTNAAVIRGALRAE+PELLTVILPQSLKKQPPESQELLSKV+NVIEKP+
Sbjct: 174 TKNHIYTSGAAGTNAAVIRGALRAERPELLTVILPQSLKKQPPESQELLSKVQNVIEKPH 233

Query: 220 NDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAKNLRKI 268
           NDHLPL+EASRLCNMDIIS VQQ+ICFAFHDS+LLMETCQEA+NLRKI
Sbjct: 234 NDHLPLLEASRLCNMDIISQVQQIICFAFHDSKLLMETCQEARNLRKI 281

[Close]
BLAST of CmoCh11G012040 vs. TAIR10
Match: AT2G43945.1 (AT2G43945.1 unknown protein)

HSP 1 Score: 329.3 bits (843), Expect = 2.9e-90
Identity = 164/184 (89.13%), Postives = 177/184 (96.20%), Query Frame = 1 

Query: 84  NDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDYLQELLAIQQQGPRSIGFFGTRNMG 143
           +DE +G +IPTQAQ+IVEGSGSV V+E KP  DVDY+QELLAIQQQGPRSIGFFGTRNMG
Sbjct: 99  SDEDSGLRIPTQAQAIVEGSGSVAVSELKPAADVDYIQELLAIQQQGPRSIGFFGTRNMG 158

Query: 144 FLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPE 203
           F+HQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAE+PELLTVILPQSLKKQPPE
Sbjct: 159 FMHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAERPELLTVILPQSLKKQPPE 218

Query: 204 SQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAKN 263
           SQELLSKV+NV+EKP+NDHLPL+EASRLCNMDIIS VQQVICFAFHDS+LLMETCQEAKN
Sbjct: 219 SQELLSKVQNVVEKPHNDHLPLLEASRLCNMDIISQVQQVICFAFHDSKLLMETCQEAKN 278

Query: 264 LRKI 268
           LRKI
Sbjct: 279 LRKI 282

[Close]
BLAST of CmoCh11G012040 vs. NCBI nr
Match: gi|659092673|ref|XP_008447166.1| (PREDICTED: uncharacterized protein LOC103489683 isoform X1 [Cucumis melo])

HSP 1 Score: 435.6 bits (1119), Expect = 8.0e-119
Identity = 236/273 (86.45%), Postives = 247/273 (90.48%), Query Frame = 1 

Query: 2   SCSSSLSLCCVFFPFPSPSPS--LRFINISNPFFFPSPN-----GRRRRPPPTSLHSPLC 61
           S SSSLSLC +FFPFPS S S  LRFINISNPFF PSPN       RRR   +SL++ L 
Sbjct: 3   SSSSSLSLC-LFFPFPSSSSSSSLRFINISNPFFSPSPNFPLLVSSRRR---SSLNTSLW 62

Query: 62  IQGHIKGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPV 121
           I+GHI+GD DG+S V Q KNTT+MFGFG NDE TGTQIPTQAQSIVEGSGSVMV+EFKPV
Sbjct: 63  IRGHIRGDTDGESSVPQKKNTTRMFGFGSNDE-TGTQIPTQAQSIVEGSGSVMVSEFKPV 122

Query: 122 PDVDYLQELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNA 181
           PDVDYLQELLAIQQQGPR+IGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNA
Sbjct: 123 PDVDYLQELLAIQQQGPRAIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNA 182

Query: 182 AVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNM 241
           AVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKP+NDHL LIEASRLCNM
Sbjct: 183 AVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPHNDHLSLIEASRLCNM 242

Query: 242 DIISHVQQVICFAFHDSRLLMETCQEAKNLRKI 268
           DIISHVQQVICFAFHDSRLLMETCQEAKNLRKI
Sbjct: 243 DIISHVQQVICFAFHDSRLLMETCQEAKNLRKI 270

[Close]
BLAST of CmoCh11G012040 vs. NCBI nr
Match: gi|449444096|ref|XP_004139811.1| (PREDICTED: uncharacterized protein LOC101209189 isoform X1 [Cucumis sativus])

HSP 1 Score: 433.0 bits (1112), Expect = 5.2e-118
Identity = 234/273 (85.71%), Postives = 246/273 (90.11%), Query Frame = 1 

Query: 1   MSCSSSLSLCCVFFPFPSPSPS-LRFINISNPFFFPSPN-----GRRRRPPPTSLHSPLC 60
           M+ SSSLSLC +FFPFPS S S LRFINISNPFF PSPN       RRR   +SL++ L 
Sbjct: 1   MTSSSSLSLC-LFFPFPSSSSSSLRFINISNPFFSPSPNFPLFVSSRRR---SSLNTSLW 60

Query: 61  IQGHIKGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPV 120
           I+GHI+GD DGDS V Q  NT +MFGFG NDE TGTQIPTQAQSIVEGSGSVMV+EFKPV
Sbjct: 61  IRGHIRGDTDGDSSVPQKNNTMRMFGFGSNDE-TGTQIPTQAQSIVEGSGSVMVSEFKPV 120

Query: 121 PDVDYLQELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNA 180
           PDVDYLQELLAIQQQGPR+IGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNA
Sbjct: 121 PDVDYLQELLAIQQQGPRAIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNA 180

Query: 181 AVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNM 240
           AVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKV+NVIEKP+NDHL LIEASRLCNM
Sbjct: 181 AVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVRNVIEKPHNDHLSLIEASRLCNM 240

Query: 241 DIISHVQQVICFAFHDSRLLMETCQEAKNLRKI 268
           DIISHVQQVICFAFHDSRLLMETCQEAKNLRKI
Sbjct: 241 DIISHVQQVICFAFHDSRLLMETCQEAKNLRKI 268

[Close]
BLAST of CmoCh11G012040 vs. NCBI nr
Match: gi|359478235|ref|XP_002275901.2| (PREDICTED: uncharacterized protein LOC100242287 [Vitis vinifera])

HSP 1 Score: 364.0 bits (933), Expect = 3.0e-97
Identity = 200/275 (72.73%), Postives = 222/275 (80.73%), Query Frame = 1 

Query: 2   SCSSSLSLCCVFFPFPSPSPSLRFINISNPF----FFPSPNGRRRRPPP-----TSLHSP 61
           S SS  S   +FF  PSPS S    N  NPF     F S    RR  P      +S H  
Sbjct: 21  SFSSFSSKSLIFFQSPSPSLSSPSPNPFNPFPSYYSFSSSQSHRRCVPEKGSSLSSRHKW 80

Query: 62  LCIQGHIKGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFK 121
           +C  GH++ D+DG S+  + +N  ++F    +DE+  +Q+PTQAQS+VEGSG+V+V+EFK
Sbjct: 81  IC--GHMRKDQDGGSWRDEEENPGRIF---CSDEEVASQVPTQAQSLVEGSGAVLVSEFK 140

Query: 122 PVPDVDYLQELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGT 181
           PVPDVDYLQELLAIQQQGPR+IGFFGTRNMGF HQELIEILSYAMVITKNHI+TSGASGT
Sbjct: 141 PVPDVDYLQELLAIQQQGPRAIGFFGTRNMGFTHQELIEILSYAMVITKNHIFTSGASGT 200

Query: 182 NAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLC 241
           NAAVIRGALRAEKPELLTVILPQSLK QPPESQELLSKVKNVIEKPYNDHLPLIEASRLC
Sbjct: 201 NAAVIRGALRAEKPELLTVILPQSLKMQPPESQELLSKVKNVIEKPYNDHLPLIEASRLC 260

Query: 242 NMDIISHVQQVICFAFHDSRLLMETCQEAKNLRKI 268
           NMDIISHVQQVICFAFHDS+LLMETCQEAKNLRKI
Sbjct: 261 NMDIISHVQQVICFAFHDSKLLMETCQEAKNLRKI 290

[Close]
BLAST of CmoCh11G012040 vs. NCBI nr
Match: gi|470101449|ref|XP_004287185.1| (PREDICTED: uncharacterized protein LOC101305205 isoform X1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 360.1 bits (923), Expect = 4.3e-96
Identity = 192/253 (75.89%), Postives = 210/253 (83.00%), Query Frame = 1 

Query: 15  PFPSPSPSLRFINISNPFFFPSPNGRRRRPPPTSLHSPLCIQGHIKGDKDGDSYVHQTKN 74
           PF  PS    F + S+ +    P        P+     LC  GH+  D+D D+   + K+
Sbjct: 24  PFQLPSSKSSFKSFSSSYL---PCAWNTTSSPSKRRKWLC--GHMGRDQDIDNRSTEDKS 83

Query: 75  TTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDYLQELLAIQQQGPRSI 134
             QMFG   +DE+ GTQIPTQAQS+VEGSGSVMV+EF+P  DVDYLQELLAIQQQGPRSI
Sbjct: 84  GMQMFG---SDEEIGTQIPTQAQSVVEGSGSVMVSEFRPAADVDYLQELLAIQQQGPRSI 143

Query: 135 GFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILP 194
           GFFGTRNMGF+HQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILP
Sbjct: 144 GFFGTRNMGFMHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILP 203

Query: 195 QSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLL 254
           QSLKKQPPESQELLSKVKNVIEKP+NDHLPL+EASRLCNMDIISHVQQVICFAFHDS+LL
Sbjct: 204 QSLKKQPPESQELLSKVKNVIEKPHNDHLPLLEASRLCNMDIISHVQQVICFAFHDSKLL 263

Query: 255 METCQEAKNLRKI 268
           METCQEAKNLRKI
Sbjct: 264 METCQEAKNLRKI 268

[Close]
BLAST of CmoCh11G012040 vs. NCBI nr
Match: gi|1009125169|ref|XP_015879466.1| (PREDICTED: uncharacterized protein LOC107415622 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 359.0 bits (920), Expect = 9.6e-96
Identity = 182/227 (80.18%), Postives = 203/227 (89.43%), Query Frame = 1 

Query: 41  RRRPPPTSLHSPLCIQGHIKGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIV 100
           RR+ PP  L     + GH++ D+D D+  +  K +  MFG   ++E  G+QIPTQAQS+V
Sbjct: 46  RRKSPP--LRGRTWLSGHMRRDQDIDNTEYGEKGSAHMFG---SEEDVGSQIPTQAQSVV 105

Query: 101 EGSGSVMVTEFKPVPDVDYLQELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVIT 160
           EGSG+V+V+EF+P PDVDYLQELLAIQQQGPR+IGFFGTRNMGF+HQELIEILSYAMVIT
Sbjct: 106 EGSGAVLVSEFRPAPDVDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYAMVIT 165

Query: 161 KNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYN 220
           KNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKP+N
Sbjct: 166 KNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPHN 225

Query: 221 DHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAKNLRKI 268
           DHLPL+EASRLCNMDIISHVQQVICFAFHDS+LLMETCQEAKNLRKI
Sbjct: 226 DHLPLLEASRLCNMDIISHVQQVICFAFHDSKLLMETCQEAKNLRKI 267

The following BLAST results are available for this feature:
BLAST of CmoCh11G012040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh11G012040 vs. TrEMBL
Match NameE-valueIdentityDescription
U5FWZ9_POPTR1.1e-9576.71Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s08200g PE=4 SV=1[more]
M5VQR9_PRUPE3.3e-9574.03Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009659mg PE=4 SV=1[more]
A0A061EZ96_THECC4.3e-9574.31Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_025087 PE=4 SV=1[more]
V4SMK8_9ROSI4.3e-9575.60Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012405mg PE=4 SV=1[more]
A0A151SB92_CAJCA2.1e-9484.51Uncharacterized protein OS=Cajanus cajan GN=KK1_025976 PE=4 SV=1[more]
BLAST of CmoCh11G012040 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G59870.14.7e-9375.00 unknown protein[more]
AT2G43945.12.9e-9089.13 unknown protein[more]
BLAST of CmoCh11G012040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659092673|ref|XP_008447166.1|8.0e-11986.45PREDICTED: uncharacterized protein LOC103489683 isoform X1 [Cucumis melo][more]
gi|449444096|ref|XP_004139811.1|5.2e-11885.71PREDICTED: uncharacterized protein LOC101209189 isoform X1 [Cucumis sativus][more]
gi|359478235|ref|XP_002275901.2|3.0e-9772.73PREDICTED: uncharacterized protein LOC100242287 [Vitis vinifera][more]
gi|470101449|ref|XP_004287185.1|4.3e-9675.89PREDICTED: uncharacterized protein LOC101305205 isoform X1 [Fragaria vesca subsp... [more]
gi|1009125169|ref|XP_015879466.1|9.6e-9680.18PREDICTED: uncharacterized protein LOC107415622 isoform X1 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G012040.1CmoCh11G012040.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR32183FAMILY NOT NAMEDcoord: 55..274
score: 1.4E
NoneNo IPR availablePANTHERPTHR32183:SF3SUBFAMILY NOT NAMEDcoord: 55..274
score: 1.4E
NoneNo IPR availableunknownSSF102405MCP/YpsA-likecoord: 125..246
score: 3.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh11G012040CmaCh11G011620Cucurbita maxima (Rimu)cmacmoB112
CmoCh11G012040Cp4.1LG04g00280Cucurbita pepo (Zucchini)cmocpeB127
CmoCh11G012040Carg26979Silver-seed gourdcarcmoB1113
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None