Carg26979 (gene) Silver-seed gourd

NameCarg26979
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionDNA recombination-mediator protein A
LocationCucurbita_argyrosperma_scaffold_370 : 41149 .. 47772 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTGTTCTTCATCTTTATCCCTCTGCTGCGTCTTCTTCCCTTTCCCCTCTCCTTCCCCTTCTCTTAGATTCATTAACATTTCCAATCCCTTCTTCTTCCCAAGCCCTAATGGACGCCGCCGCCGCCCTCCTCCTACTTCTCTCCATTCACCTCTGGTAACTTCTCCCTCTCTATTTCCGCATACGCTTTTCTTGTTTTCTTTTATCTCTTTCTTTTATGTTTTTCCATTTTCCTGCTCTTGTTGTTGTTGTTGTTGTTCTGTTCTTGTTTTGTGGCTGACGGGATTTTGATTGCTTTGTCTTGCCAAATGTCTTGTTCCAATGAATGACTCTCCGTACTTGCCAGAATTATGTAGGTTTCTTTACGAATTTTGCGTTATTTACTTGGAGGTACTCGTCTTTTTGTGTTTATTATGCTCAAGAAGTTCGTTGGTTTTTTATGCCCTAAAATTGTAGCAAAGAAAAGAAGATGCGTGATTATTGAGAAATAGAGAGGATTATTTGCTAGATATTGAAATTGATTGTTGAGAGCAGTTGTTTATCAACTGTTGAAGACGACGGGTAGGTAATCTGGAGTTCGCTTCATACAAACGATTTTTCTTCAATTTAAACCCTAACGTAATTGTAAAGTGGGTTTAGGATATTCATTGGTGCTCCTGGGGTTGGTTGAGTGCCGATTACAAATCGAATGTATGGAACTACAGCAATGACAGTTGAGAAAAGATGATCCTGTGCTTTTCACTCTTTCTTCAAAGGGCATATCACCCCAGAAAAATTACACCAAAAGGGCAGGGAAGCATTAGACCCTTGAGATCCCAAAAGAAATGGTTTGACTTTCTTCGGGTGTTTCCAAATCATATTGTAAAGAAGATAACTCTCACTCTTCCCCTTGATCCTCAAGTCTATAAGAAAAGAGCTCACTTAGCTGCCATCCAGATCTCATCCAAGTCCAATGATTGACGAGTTTGTTAGGTTGGAAATCTGCCAAAATATGAGATAGGATGCCCTTCAAGAATCTCATCATCCTTGTGACTTTTTCTTATGCCAAGATTCCAGCTTCTGTTTGAAGAAATCTACGGGCTTTTCATGGATGATACTTTTTGGCTTGGTAAAGAATGAAGTCTCATAATTGCTTTAGCAAAAGGCACAATGTCCTACTAAAGATCTTCCCAAAAGTATGTTGAAGAGCCAAAGCCTACTGCCACTTTCATTTTGAGTAAATGAGGTTTTTGAGCTTGAGAGTATCTTTCCAAGAGCCTTTTGGAGAATGAAGAAAGAGTGTCCGACCTTTTTTCCAAAATTGGAAGCCAAATTTTTCCTCAATGATCTTCCTCCAAACGTATGTTGAAGGTTTCTCGTTATTTTTTTTTTTTAAATAAACAAAGATATATTTATCAAAAGAGAAACAACCCAAGGACGAAGGGGCAAGGAGCTCCCTCCCACAAAAACTAATGAAGCACTGCCTCCCAATTCTTTTGTAACAAGTACTATAGTTGCAAAAGAATTTATTGTTTCTAGAACACTGCAAATAAAATGTAATTTGTACACTATTACAAAACAAAACATAAGAATTGGACCTATCCTTAAAGATTCTCCTATTTCTTTCCTACTGAATCTCCCGAACAAGCGCCCGAGCAACACATCTCCACAAAAAAAACAATTGCCTTGCCCTTAAGCTTCTAGCCATTAAGAGCTTCTACCAACCCCTCATTCCAACTTCTAAGGACGACACACTAAGACCAAAAGCTTTAAGGCACTGATCTCTCCCTCTCCCTGCAAAGTGGCAACTAAGAAAAACCTTGAACTGTTTTTATCTAGAGCATAGCAAAACCTTGAACTGTTAATTTCGTTAGTAGACTTGATAAGTTGATGAAATAGGCATCTCCTTTAGGGTTCTGTTTTAACAGCGACAATAAATATGGGGTCGCACATGTCAAATTTTATATGAAAGAAAGAGGGGAAAACATGGAAAAATGCACTTAGTTGGATATAGTTTCTAATAATAATTTACACTTTGGGATGGATTAACTCATAAACTATCACTAACGTTATAACTAGCAATCTGGAAATTTGCATCCAAACTCAACACATTGTCATCCCTTGAGCAAGTGCTCTATTAGATAGATGATATCTGTCTTTCTCAAAACTGATAGTTACTTAAGCCGTCCAAACAATTGTTTTGTCTTCTACATAATTGTAAGACAACCACTAGTTCATAAAATCAAAAGCAAGGAAATTTCATGATTCAACAAGATTCTGGAGAAAACATCCAACTTCTGAGGGGAAAAGATCCTAAAACTGTCAATTTCCTTCATCCTTTTCCTAATGCATGCCGCACATGCATTCATTTTGACAGTTTGTCCCTTTTTTCTATTAGTTTTTTTTGGTTGGATAAGCAGAGTTATGAAGAGAGGAAGGAAACTTCCAACCACCCATGGTGGATTACAAAAATGATCACCAATCAGCCCAAAGATCAATGATTCGATCCTACACCCCGCTATTGTTGAACTCAAAAAACAAACAATATATTGCCAAATAGAGACTTGAGACATAATCAAATAATCTTTAAATTTTGATGTTCATTTGCACAAATAAAAAGTAGAAAAGGGATGGTATCGGTAACACTAAGAAAATTAGTCTCCAAACCATGAAAACCTGATTATTTGGTGCCACAAACTCCACAAAAAAGGCCTAGTTATGGACCACCAGAGCAACTTCTTGGTCTTCTTAAAAGGATGATGCACAAAGGAGATTCTTTAAGTGGGTAAACTATTTTCTATTACTAGAATAGACTTCCACAACGATTGGGCAAGAATTTTTTAAACCCTTAACAATGAATTTCTTAAACCCTTAACTGCTGGAGGAGTTTCACTATTTATCCCTTCCTCCCTAATAAAGCCCTTTTGTTGTGTCCCACGACAAGTATGCAAGGCTATGAGCCACAAATGTAGGGTGGATTACTTTTGGAGCCTTTACAATGAAGTTAGAAAGATGGGACCCCTTTGAGGCGCAGGAGAACTACAGTGGTCCCCTCTTACGGGGATTGGATAAATTTCAGAAACATTCCCCTGCATTTATGGAGCCGAGCCACATTCAAGGCAATAGGTGATTGCTTTGCGGTCTTGTGGACTGTGAAGATAAAAACTCTTCCCTCATTGAGTGCTTAGTAGTTGCTATTAAGTGGACTGTGCAGATCAAAACTCTTCCCTCATTGAGTGCTTAGTAGTTGCTATTAAAGTGCAAGGGAATTACTGTGGATTCATCCTCGCTGAAGTGAAAACTTCTTAATAGAGACCAGGTGTTTTCCACCCATGTGAGTACGCTCCAATTTGGCTGGTTGTTGGCCAAAAAGAAAGTTGAAGTTCATGGTGGGTTTTCATCTGAAGCAGCCACAAGGTCAGGTCCTAACTCGATAGATTTGTGGAGGTTAAGGGAAGATTTCTTTTACCCATCAGACACTATTTTTTTACCCGGAGAAGACTGCTTGCACACCCCCCATGACTATTAAGGTTAAGGGGAGAGGTTTCAGGCTTTAGCCCAAATTTGAATCACATGCCTAATAGGACTGCTTGCACACCCCCCATGATAGTCTTCCCTCAAACTTCACACGAATGTAGACACCACTGCCAGGCAAAGTAGTAGCAGTCCTTTGCATTAGTGGGCCTTTCCAGATTTGTCCTCTAAATTCAAAAAGCAGACAGATGGAGGAAAGGGCAAAATCAGTCGAATTTGTGGAAGATTTAGAGACAGATCCTAGAAAGTCATTTCTGAAAAGAAGAAAGGGGAAATTTTGCTCTACAACCAATACCCAGGCTGAGTTTTCTAATAAACCATTTGGAAAAGCTAGGTGATTAAAAAGATATGTTCTCCGAGGTTTCTATTTCCAGCCAAGAAGAGGGCAGAGAGGTAGAGGATTGCATAGAGATCCCTGAGAATTATCAGGTTTGTTTTCAAGGAAATGACGTTTTCCCTTTATCAAAGATAAATTACAGATGTTGTTATATTTTTTTTCTATAAAGTTCGGTAGTTGACCCATTCATAAGATAAATTTATATTCATTTTGAACAGTAACAAAGTCAACTTTCATTAATGAATATACAAAAGAAAAGGAATGACAGTCTCATCTCCTGGACTTCTGAAGTACGACAAATTCTTCCAATTGGATCATAAAGAGGAAATGAAGGGCATAATCACAAAAAGTGGGGAGCTATTTACACCATGAGAAGGAAAAAAAAAAAAAAAAAAAAGAAATCAGATTCTCTATGAAACTATCCAAAATTTAGTGTCAGAACATGCAATTTGTTCCTTTTTAGCAATTGGTCCCAAAACACCTTTCTTTTCTTAAAAAGTATTAACATAATTTTTTTCTTCGTTATTATTATTTGTTGATTGTTGCGGATGGCTGAGGATTTTACCCATGCATTGTCAAGATCCAAAAACTATGGCTGAAAATATTGAATTTTGATCGAATATGGTTGACACAGACCTAATCTTAGTTGTCAATCAACCATGGTTATACTTGTAGTTCTAGCAAGAACATAATTCTAGAACAACTTTTATGGAATCGAACTTATCCATTATACCATCTAAATGCTGATGTCATGTAAATATTTCTAGTGTAGATTAATTTGTTTGCATGGCGTGTTTTAGGTATCAAAGTTGATAACAACTTGTGATTAACTTGGTATTTTCTGTAATTGATTTGTCCTTGATGACTTATGATGATTAGTCAGCTTCATAGATCTTTGCATCTGTCATTTGCAATGCCAATCATTGATTCTCTTTTGGAACATTGATGCTCTTATCTTGTTAGGTTATCTGAACAGATTTTTATTCCCAGTTGACTTGATTCACTTCAACCTTCTAATTGGAACTTTTGTTCAGTATTGATACTATTTTAGAGTTGGCATGGATAAAATAGCGAGTTTCTACTTCACCACATTTGTGGGCAGTTGGTTTTCACTAATGATTTACTATCAGGGGATCTTTTTTATGTACTGGTTATAGTGCATCCAAGGGCATATAAAAGGAGATAAAGATGGAGATAGTTACGTGCATCAGACGAAGAATACAACGCAGATGTTTGGATTTGGGTTTAATGATGAGAAGACGGGCACTCAAATTCCAACCCAGGCTCAGTCCATAGTGGAAGGATCAGGATCAGTTATGGTGACTGAGTTCAAACCAGTTCCTGATGTTGATTATCTACAGGTGAGTGATAAGATACGATCATTTCGAATACTTATGTTGGATGTTGGCCATCTCCTAAAAAAAGATGATTAAAAGGAAAATGGACTATATTTTTCTTCCAATGCATTCATTTCGAATCTGAAGTTTTTTTACCTGCATGACTTGAGGATTTGCAAATGTTAGAATTTCCTGAGGAAGTAATTCTTTTGGGTGACCTTTTATAAAGCTTTAAGTCTTAGCTCTTAGTGCCCACAATTTCTCGATTTCAATGCTTGCGTGAAGCTCCTTTCAAGTCACAATGTGTTTTTATTTTCACAGGAGTTATTGGCCATTCAACAACAAGGTCCTAGATCCATTGGTTTCTTTGGAACTCGGAATATGGGTTTCTTGCATCAAGAACTCATCGAGATTCTTAGCTATGCAATGGTTATAACGGTAGGATATGTGGTCTAATGTCAATGATTATACTGAAGGGCTATTTGGTTTTTGATGAGTACATAAACTTCATATTGCTTGATAACTTCTGTATGCAGAAAAACCACATCTATACTTCAGGAGCATCTGGAACCAATGCAGCAGTTATCAGAGGTGCATTGAGGGCTGAGAAACCAGAACTGCTTACTGTCATTTTGCCACAAAGTTTGAAGAAACAACCTCCTGAGAGCCAGGAATTATTGTCCAAAGTAAGTTTTGTTGATGAGTTCAATTGGGTTGGTGGTCTGTTATGTTCATTTAATTATTTATCTATCATGATTATCTTGGCATTTGTAGGTTAAGAATGTGATAGAGAAGCCCTACAACGATCATCTACCTTTAATAGAAGCTAGCAGGTAGCTTTGCGTGTAAATGTATTATCACATTGTTTTAAAAAAAACCCTTATTTCTGCTATATTCATGATCGTCCATGAAAGTCGTATAACGAGATACCTCAGGTTGCAACTAAAGTTAAAATCAAATGAGATAACGGAATTTTGGTGTATCTTTGCTTGTAAATGTATATCATTACATTGTTTTCAAAATGTTTCAAGTTTGAATGTTCCATCTAATGCCTTTGTTGAAAGTTGCAGGTTATGCAATATGGACATCATTTCGCATGTACAGCAAGTCATTTGCTTTGCATTTCATGATAGTAGGTTGCTCATGGAAACTTGTCAAGAGGCAAAAAATCTCCGAAAAATCGTTACCCTTTTTTATCTCGACTAAGAATAAGAAGAAACTTCCCCAAATTCTGTAAATACATTGTTTGACAGAGATTATTACATATTTTCCCTAATTTTGCTTGTAAAGTTGCTGCTCCTGCCTGCTCAAAGAGGGCCAATTTCCCTTTCCAAACCTTACTGTTCAAATCAGGAATTCTGCAGTGGTAAGTACATTTACAGATTAGAATTCTCAAAAATTTTCAGATCAAGATTTATGAGGAGGAATGTTTTG

mRNA sequence

ATGAGTTGTTCTTCATCTTTATCCCTCTGCTGCGTCTTCTTCCCTTTCCCCTCTCCTTCCCCTTCTCTTAGATTCATTAACATTTCCAATCCCTTCTTCTTCCCAAGCCCTAATGGACGCCGCCGCCGCCCTCCTCCTACTTCTCTCCATTCACCTCTGTGCATCCAAGGGCATATAAAAGGAGATAAAGATGGAGATAGTTACGTGCATCAGACGAAGAATACAACGCAGATGTTTGGATTTGGGTTTAATGATGAGAAGACGGGCACTCAAATTCCAACCCAGGCTCAGTCCATAGTGGAAGGATCAGGATCAGTTATGGTGACTGAGTTCAAACCAGTTCCTGATGTTGATTATCTACAGGAGTTATTGGCCATTCAACAACAAGGTCCTAGATCCATTGGTTTCTTTGGAACTCGGAATATGGGTTTCTTGCATCAAGAACTCATCGAGATTCTTAGCTATGCAATGGTTATAACGAAAAACCACATCTATACTTCAGGAGCATCTGGAACCAATGCAGCAGTTATCAGAGGTGCATTGAGGGCTGAGAAACCAGAACTGCTTACTGTCATTTTGCCACAAAGTTTGAAGAAACAACCTCCTGAGAGCCAGGAATTATTGTCCAAAGTTAAGAATGTGATAGAGAAGCCCTACAACGATCATCTACCTTTAATAGAAGCTAGCAGGTTATGCAATATGGACATCATTTCGCATGTACAGCAAGTCATTTGCTTTGCATTTCATGATAGTAGGTTGCTCATGGAAACTTGTCAAGAGGCAAAAAATCTCCGAAAAATCGTTACCCTTTTTTATCTCGACTAAGAATAAGAAGAAACTTCCCCAAATTCTGTAAATACATTGTTTGACAGAGATTATTACATATTTTCCCTAATTTTGCTTGTAAAGTTGCTGCTCCTGCCTGCTCAAAGAGGGCCAATTTCCCTTTCCAAACCTTACTGTTCAAATCAGGAATTCTGCAGTGGTAAGTACATTTACAGATTAGAATTCTCAAAAATTTTCAGATCAAGATTTATGAGGAGGAATGTTTTG

Coding sequence (CDS)

ATGAGTTGTTCTTCATCTTTATCCCTCTGCTGCGTCTTCTTCCCTTTCCCCTCTCCTTCCCCTTCTCTTAGATTCATTAACATTTCCAATCCCTTCTTCTTCCCAAGCCCTAATGGACGCCGCCGCCGCCCTCCTCCTACTTCTCTCCATTCACCTCTGTGCATCCAAGGGCATATAAAAGGAGATAAAGATGGAGATAGTTACGTGCATCAGACGAAGAATACAACGCAGATGTTTGGATTTGGGTTTAATGATGAGAAGACGGGCACTCAAATTCCAACCCAGGCTCAGTCCATAGTGGAAGGATCAGGATCAGTTATGGTGACTGAGTTCAAACCAGTTCCTGATGTTGATTATCTACAGGAGTTATTGGCCATTCAACAACAAGGTCCTAGATCCATTGGTTTCTTTGGAACTCGGAATATGGGTTTCTTGCATCAAGAACTCATCGAGATTCTTAGCTATGCAATGGTTATAACGAAAAACCACATCTATACTTCAGGAGCATCTGGAACCAATGCAGCAGTTATCAGAGGTGCATTGAGGGCTGAGAAACCAGAACTGCTTACTGTCATTTTGCCACAAAGTTTGAAGAAACAACCTCCTGAGAGCCAGGAATTATTGTCCAAAGTTAAGAATGTGATAGAGAAGCCCTACAACGATCATCTACCTTTAATAGAAGCTAGCAGGTTATGCAATATGGACATCATTTCGCATGTACAGCAAGTCATTTGCTTTGCATTTCATGATAGTAGGTTGCTCATGGAAACTTGTCAAGAGGCAAAAAATCTCCGAAAAATCGTTACCCTTTTTTATCTCGACTAA

Protein sequence

MSCSSSLSLCCVFFPFPSPSPSLRFINISNPFFFPSPNGRRRRPPPTSLHSPLCIQGHIKGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDYLQELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD
BLAST of Carg26979 vs. NCBI nr
Match: XP_022932516.1 (uncharacterized protein LOC111438980 isoform X1 [Cucurbita moschata])

HSP 1 Score: 522.7 bits (1345), Expect = 7.5e-145
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0

Query: 1   MSCSSSLSLCCXXXXXXXXXXXXRFINISNPFFFPSPNGRRRRPPPTSLHSPLCIQGHIK 60
           MSCSSSLSLCCXXXXXXXXXXXXRFINISNPFFFPSPNGRRRRPPPTSLHSPLCIQGHIK
Sbjct: 1   MSCSSSLSLCCXXXXXXXXXXXXRFINISNPFFFPSPNGRRRRPPPTSLHSPLCIQGHIK 60

Query: 61  GDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDYL 120
           GDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDYL
Sbjct: 61  GDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDYL 120

Query: 121 QELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGA 180
           QELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGA
Sbjct: 121 QELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGA 180

Query: 181 LRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHV 240
           LRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHV
Sbjct: 181 LRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHV 240

Query: 241 QQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD 275
           QQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD
Sbjct: 241 QQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD 274

BLAST of Carg26979 vs. NCBI nr
Match: XP_022969874.1 (uncharacterized protein LOC111468939 isoform X1 [Cucurbita maxima])

HSP 1 Score: 507.7 bits (1306), Expect = 2.5e-140
Identity = 259/275 (94.18%), Postives = 260/275 (94.55%), Query Frame = 0

Query: 1   MSCSSSLSLCC-XXXXXXXXXXXXRFINISNPFFFPSPNGRRRRPPPTSLHSPLCIQGHI 60
           MSCSSSLSLCC             RFINISNPFFFPSPNGRRRR PP SLH+PLCIQGHI
Sbjct: 1   MSCSSSLSLCCVFFPFPSSSSPSLRFINISNPFFFPSPNGRRRR-PPASLHTPLCIQGHI 60

Query: 61  KGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDY 120
           KGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDY
Sbjct: 61  KGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDY 120

Query: 121 LQELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRG 180
           LQELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRG
Sbjct: 121 LQELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRG 180

Query: 181 ALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISH 240
           ALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISH
Sbjct: 181 ALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISH 240

Query: 241 VQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD 275
           VQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD
Sbjct: 241 VQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD 274

BLAST of Carg26979 vs. NCBI nr
Match: XP_023530798.1 (uncharacterized protein LOC111793242 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 493.0 bits (1268), Expect = 6.4e-136
Identity = 253/276 (91.67%), Postives = 255/276 (92.39%), Query Frame = 0

Query: 1   MSC-SSSLSLCCXXXXXXXXXXXXRFINISNPFFFPSPNGR-RRRPPPTSLHSPLCIQGH 60
           MSC SSSLSLCC            RFIN+SNPF FPSPNGR       TSLH+PLCIQGH
Sbjct: 1   MSCSSSSLSLCCVFFPFPSSSPSLRFINLSNPFLFPSPNGRXXXXXXXTSLHTPLCIQGH 60

Query: 61  IKGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVD 120
           IKGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVD
Sbjct: 61  IKGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVD 120

Query: 121 YLQELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIR 180
           YLQELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIR
Sbjct: 121 YLQELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIR 180

Query: 181 GALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIIS 240
           GALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIIS
Sbjct: 181 GALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIIS 240

Query: 241 HVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD 275
           HVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD
Sbjct: 241 HVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD 276

BLAST of Carg26979 vs. NCBI nr
Match: XP_008447166.1 (PREDICTED: uncharacterized protein LOC103489683 isoform X1 [Cucumis melo])

HSP 1 Score: 431.4 bits (1108), Expect = 2.3e-117
Identity = 226/256 (88.28%), Postives = 236/256 (92.19%), Query Frame = 0

Query: 24  RFINISNPFFFPSPN-----GRRRRPPPTSLHSPLCIQGHIKGDKDGDSYVHQTKNTTQM 83
           RFINISNPFF PSPN       RRR   +SL++ L I+GHI+GD DG+S V Q KNTT+M
Sbjct: 26  RFINISNPFFSPSPNFPLLVSSRRR---SSLNTSLWIRGHIRGDTDGESSVPQKKNTTRM 85

Query: 84  FGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDYLQELLAIQQQGPRSIGFFG 143
           FGFG NDE TGTQIPTQAQSIVEGSGSVMV+EFKPVPDVDYLQELLAIQQQGPR+IGFFG
Sbjct: 86  FGFGSNDE-TGTQIPTQAQSIVEGSGSVMVSEFKPVPDVDYLQELLAIQQQGPRAIGFFG 145

Query: 144 TRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLK 203
           TRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLK
Sbjct: 146 TRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLK 205

Query: 204 KQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETC 263
           KQPPESQELLSKVKNVIEKP+NDHL LIEASRLCNMDIISHVQQVICFAFHDSRLLMETC
Sbjct: 206 KQPPESQELLSKVKNVIEKPHNDHLSLIEASRLCNMDIISHVQQVICFAFHDSRLLMETC 265

Query: 264 QEAKNLRKIVTLFYLD 275
           QEAKNLRKIVTLFYLD
Sbjct: 266 QEAKNLRKIVTLFYLD 277

BLAST of Carg26979 vs. NCBI nr
Match: XP_004139811.1 (PREDICTED: uncharacterized protein LOC101209189 isoform X1 [Cucumis sativus])

HSP 1 Score: 427.6 bits (1098), Expect = 3.3e-116
Identity = 224/256 (87.50%), Postives = 234/256 (91.41%), Query Frame = 0

Query: 24  RFINISNPFFFPSPN-----GRRRRPPPTSLHSPLCIQGHIKGDKDGDSYVHQTKNTTQM 83
           RFINISNPFF PSPN       RRR   +SL++ L I+GHI+GD DGDS V Q  NT +M
Sbjct: 24  RFINISNPFFSPSPNFPLFVSSRRR---SSLNTSLWIRGHIRGDTDGDSSVPQKNNTMRM 83

Query: 84  FGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDYLQELLAIQQQGPRSIGFFG 143
           FGFG NDE TGTQIPTQAQSIVEGSGSVMV+EFKPVPDVDYLQELLAIQQQGPR+IGFFG
Sbjct: 84  FGFGSNDE-TGTQIPTQAQSIVEGSGSVMVSEFKPVPDVDYLQELLAIQQQGPRAIGFFG 143

Query: 144 TRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLK 203
           TRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLK
Sbjct: 144 TRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLK 203

Query: 204 KQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETC 263
           KQPPESQELLSKV+NVIEKP+NDHL LIEASRLCNMDIISHVQQVICFAFHDSRLLMETC
Sbjct: 204 KQPPESQELLSKVRNVIEKPHNDHLSLIEASRLCNMDIISHVQQVICFAFHDSRLLMETC 263

Query: 264 QEAKNLRKIVTLFYLD 275
           QEAKNLRKIVTLFYLD
Sbjct: 264 QEAKNLRKIVTLFYLD 275

BLAST of Carg26979 vs. TAIR10
Match: AT3G59870.1 (unknown protein)

HSP 1 Score: 347.1 bits (889), Expect = 1.0e-95
Identity = 173/223 (77.58%), Postives = 196/223 (87.89%), Query Frame = 0

Query: 52  PLCIQGHIKGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEF 111
           P+C     +   D DS+V++  N T  F    +   TG +IPTQAQ+IVEG GS+ V+E 
Sbjct: 66  PMCFPEQTRDQDDVDSWVNKEDNVTCRFDSDEDTTTTGLRIPTQAQAIVEGPGSLAVSEL 125

Query: 112 KPVPDVDYLQELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVITKNHIYTSGASG 171
           + VPDVDY+QELLAIQQQGPR+IGFFGTRNMGF+HQELI+ILSYAMVITKNHIYTSGA+G
Sbjct: 126 QRVPDVDYIQELLAIQQQGPRTIGFFGTRNMGFMHQELIQILSYAMVITKNHIYTSGAAG 185

Query: 172 TNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDHLPLIEASRL 231
           TNAAVIRGALRAE+PELLTVILPQSLKKQPPESQELLSKV+NVIEKP+NDHLPL+EASRL
Sbjct: 186 TNAAVIRGALRAERPELLTVILPQSLKKQPPESQELLSKVQNVIEKPHNDHLPLLEASRL 245

Query: 232 CNMDIISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD 275
           CNMDIIS VQQ+ICFAFHDS+LLMETCQEA+NLRKIVTLFYLD
Sbjct: 246 CNMDIISQVQQIICFAFHDSKLLMETCQEARNLRKIVTLFYLD 288

BLAST of Carg26979 vs. TAIR10
Match: AT2G43945.1 (unknown protein)

HSP 1 Score: 342.8 bits (878), Expect = 1.9e-94
Identity = 171/191 (89.53%), Postives = 184/191 (96.34%), Query Frame = 0

Query: 84  NDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDYLQELLAIQQQGPRSIGFFGTRNMG 143
           +DE +G +IPTQAQ+IVEGSGSV V+E KP  DVDY+QELLAIQQQGPRSIGFFGTRNMG
Sbjct: 99  SDEDSGLRIPTQAQAIVEGSGSVAVSELKPAADVDYIQELLAIQQQGPRSIGFFGTRNMG 158

Query: 144 FLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPE 203
           F+HQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAE+PELLTVILPQSLKKQPPE
Sbjct: 159 FMHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAERPELLTVILPQSLKKQPPE 218

Query: 204 SQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAKN 263
           SQELLSKV+NV+EKP+NDHLPL+EASRLCNMDIIS VQQVICFAFHDS+LLMETCQEAKN
Sbjct: 219 SQELLSKVQNVVEKPHNDHLPLLEASRLCNMDIISQVQQVICFAFHDSKLLMETCQEAKN 278

Query: 264 LRKIVTLFYLD 275
           LRKIVTLFYLD
Sbjct: 279 LRKIVTLFYLD 289

BLAST of Carg26979 vs. TrEMBL
Match: tr|A0A1S3BHE5|A0A1S3BHE5_CUCME (uncharacterized protein LOC103489683 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489683 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 1.5e-117
Identity = 226/256 (88.28%), Postives = 236/256 (92.19%), Query Frame = 0

Query: 24  RFINISNPFFFPSPN-----GRRRRPPPTSLHSPLCIQGHIKGDKDGDSYVHQTKNTTQM 83
           RFINISNPFF PSPN       RRR   +SL++ L I+GHI+GD DG+S V Q KNTT+M
Sbjct: 26  RFINISNPFFSPSPNFPLLVSSRRR---SSLNTSLWIRGHIRGDTDGESSVPQKKNTTRM 85

Query: 84  FGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDYLQELLAIQQQGPRSIGFFG 143
           FGFG NDE TGTQIPTQAQSIVEGSGSVMV+EFKPVPDVDYLQELLAIQQQGPR+IGFFG
Sbjct: 86  FGFGSNDE-TGTQIPTQAQSIVEGSGSVMVSEFKPVPDVDYLQELLAIQQQGPRAIGFFG 145

Query: 144 TRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLK 203
           TRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLK
Sbjct: 146 TRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLK 205

Query: 204 KQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETC 263
           KQPPESQELLSKVKNVIEKP+NDHL LIEASRLCNMDIISHVQQVICFAFHDSRLLMETC
Sbjct: 206 KQPPESQELLSKVKNVIEKPHNDHLSLIEASRLCNMDIISHVQQVICFAFHDSRLLMETC 265

Query: 264 QEAKNLRKIVTLFYLD 275
           QEAKNLRKIVTLFYLD
Sbjct: 266 QEAKNLRKIVTLFYLD 277

BLAST of Carg26979 vs. TrEMBL
Match: tr|A0A1Q3D225|A0A1Q3D225_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_29922 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 6.4e-100
Identity = 195/252 (77.38%), Postives = 213/252 (84.52%), Query Frame = 0

Query: 28  ISNPFF-----FPSPNGRRRRPPPTSLHSPLCIQGHIKGDKDGDSYVHQTKNTTQMFGFG 87
           I NP F      P PN  R +PP  S  + LC  GH++ D D   + ++ +N   M G  
Sbjct: 32  IINPSFNLCSSIPCPNSSRAKPPFLSKPTWLC--GHMRRDPDMHGWRYEEENVVNMLG-- 91

Query: 88  FNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDYLQELLAIQQQGPRSIGFFGTRNM 147
            +DE  G QIPTQAQS+VEGSG+VMV+EFKP PDVDYLQELLAIQQQGPR+IGFFGTRNM
Sbjct: 92  -SDENNGIQIPTQAQSVVEGSGAVMVSEFKPAPDVDYLQELLAIQQQGPRAIGFFGTRNM 151

Query: 148 GFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPP 207
           GF+HQELIEILSYA+VITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQ P
Sbjct: 152 GFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQSP 211

Query: 208 ESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAK 267
           ESQELLSKVK VIEKP+NDHLPLIEASRLCNM+IISHVQQVICFAFHDS+LLMETCQEAK
Sbjct: 212 ESQELLSKVKTVIEKPHNDHLPLIEASRLCNMNIISHVQQVICFAFHDSKLLMETCQEAK 271

Query: 268 NLRKIVTLFYLD 275
           NLRKIVTLFYLD
Sbjct: 272 NLRKIVTLFYLD 278

BLAST of Carg26979 vs. TrEMBL
Match: tr|A0A1S3BHN4|A0A1S3BHN4_CUCME (uncharacterized protein LOC103489683 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489683 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 8.3e-100
Identity = 191/197 (96.95%), Postives = 194/197 (98.48%), Query Frame = 0

Query: 78  MFGFGFNDEKTGTQIPTQAQSIVEGSGSVMVTEFKPVPDVDYLQELLAIQQQGPRSIGFF 137
           MFGFG NDE TGTQIPTQAQSIVEGSGSVMV+EFKPVPDVDYLQELLAIQQQGPR+IGFF
Sbjct: 1   MFGFGSNDE-TGTQIPTQAQSIVEGSGSVMVSEFKPVPDVDYLQELLAIQQQGPRAIGFF 60

Query: 138 GTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSL 197
           GTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSL
Sbjct: 61  GTRNMGFLHQELIEILSYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSL 120

Query: 198 KKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMET 257
           KKQPPESQELLSKVKNVIEKP+NDHL LIEASRLCNMDIISHVQQVICFAFHDSRLLMET
Sbjct: 121 KKQPPESQELLSKVKNVIEKPHNDHLSLIEASRLCNMDIISHVQQVICFAFHDSRLLMET 180

Query: 258 CQEAKNLRKIVTLFYLD 275
           CQEAKNLRKIVTLFYLD
Sbjct: 181 CQEAKNLRKIVTLFYLD 196

BLAST of Carg26979 vs. TrEMBL
Match: tr|A0A2P4K033|A0A2P4K033_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_17268 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 8.3e-100
Identity = 189/241 (78.42%), Postives = 211/241 (87.55%), Query Frame = 0

Query: 34  FPSPNGRRRRPPPTSLHSPLCIQGHIKGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIP 93
           FP       R    SL +P  + GH + D+D D++ ++ +     FG   +DE+ G QIP
Sbjct: 67  FPHSQHTCTRKHKRSLSTPTWLCGHTRRDQDMDNWNYEEEKVFNKFG---SDEEAGNQIP 126

Query: 94  TQAQSIVEGSGSVMVTEFKPVPDVDYLQELLAIQQQGPRSIGFFGTRNMGFLHQELIEIL 153
           TQAQ+IVEGSG+V+++EFKPVPDVDYLQELLAIQQQGPRSIGFFGTRNMGF+HQELIEIL
Sbjct: 127 TQAQTIVEGSGAVLMSEFKPVPDVDYLQELLAIQQQGPRSIGFFGTRNMGFMHQELIEIL 186

Query: 154 SYAMVITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKN 213
           SYAMVITKNHIYTSGASGTNAAVIRGALRAE+PELLTVILPQSLKKQPPESQELLSKVKN
Sbjct: 187 SYAMVITKNHIYTSGASGTNAAVIRGALRAERPELLTVILPQSLKKQPPESQELLSKVKN 246

Query: 214 VIEKPYNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYL 273
           VIEKP+NDHLPL+EASRLCNMDIISHVQQVICFAFHDS+LLMETCQEAKN+RKIVTLFYL
Sbjct: 247 VIEKPHNDHLPLLEASRLCNMDIISHVQQVICFAFHDSKLLMETCQEAKNMRKIVTLFYL 304

Query: 274 D 275
           D
Sbjct: 307 D 304

BLAST of Carg26979 vs. TrEMBL
Match: tr|M5VQR9|M5VQR9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G269700 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 1.9e-99
Identity = 191/232 (82.33%), Postives = 208/232 (89.66%), Query Frame = 0

Query: 43  RPPPTSLHSPLCIQGHIKGDKDGDSYVHQTKNTTQMFGFGFNDEKTGTQIPTQAQSIVEG 102
           + P  S    LC  GH++ D+D DS  ++      MFG   +DE+ GTQIPTQAQS+VEG
Sbjct: 57  KTPIRSKRKWLC--GHMRRDQDIDSPSNEDNKGASMFG---SDEEVGTQIPTQAQSVVEG 116

Query: 103 SGSVMVTEFKPVPDVDYLQELLAIQQQGPRSIGFFGTRNMGFLHQELIEILSYAMVITKN 162
           SG+V+V+EF+PV DVDYLQELLAIQQQGPR+IGFFGTRNMGF+HQELIEILSYAMVITKN
Sbjct: 117 SGAVLVSEFRPVADVDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYAMVITKN 176

Query: 163 HIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDH 222
           HIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDH
Sbjct: 177 HIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVKNVIEKPYNDH 236

Query: 223 LPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD 275
           LPL+EASRLCNMDIISHVQQVICFAFHDS+LLMETCQEAKNLRKIVTLFYLD
Sbjct: 237 LPLLEASRLCNMDIISHVQQVICFAFHDSKLLMETCQEAKNLRKIVTLFYLD 283

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022932516.17.5e-145100.00uncharacterized protein LOC111438980 isoform X1 [Cucurbita moschata][more]
XP_022969874.12.5e-14094.18uncharacterized protein LOC111468939 isoform X1 [Cucurbita maxima][more]
XP_023530798.16.4e-13691.67uncharacterized protein LOC111793242 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_008447166.12.3e-11788.28PREDICTED: uncharacterized protein LOC103489683 isoform X1 [Cucumis melo][more]
XP_004139811.13.3e-11687.50PREDICTED: uncharacterized protein LOC101209189 isoform X1 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
AT3G59870.11.0e-9577.58unknown protein[more]
AT2G43945.11.9e-9489.53unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3BHE5|A0A1S3BHE5_CUCME1.5e-11788.28uncharacterized protein LOC103489683 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1Q3D225|A0A1Q3D225_CEPFO6.4e-10077.38Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_29922 PE=4... [more]
tr|A0A1S3BHN4|A0A1S3BHN4_CUCME8.3e-10096.95uncharacterized protein LOC103489683 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A2P4K033|A0A2P4K033_QUESU8.3e-10078.42Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_17268 PE=4 SV=1[more]
tr|M5VQR9|M5VQR9_PRUPE1.9e-9982.33Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G269700 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg26979-RACarg26979-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR32183:SF3SUBFAMILY NOT NAMEDcoord: 43..274
NoneNo IPR availablePANTHERPTHR32183FAMILY NOT NAMEDcoord: 43..274
NoneNo IPR availableSUPERFAMILYSSF102405MCP/YpsA-likecoord: 125..246

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg26979CmaCh11G011620Cucurbita maxima (Rimu)carcmaB1143
Carg26979CmoCh11G012040Cucurbita moschata (Rifu)carcmoB1113
Carg26979Cp4.1LG04g00280Cucurbita pepo (Zucchini)carcpeB1154
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None