Cp4.1LG03g18450 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG03g18450
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG03 : 12248212 .. 12249274 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTGATCTCTGTGTTCTCAGAGCAAAGCTACCAATGGCGTCTTTCTCACTGCGTGCAGTGGCTTTTTGGGTGTGTGTGGGGATTGCCTTGGTCGGAGCCGACAATGTGGTAGAAGATGACAAGCGTTTGTTTCATCGGCCACTTGGTTTTTTGAAGGGTAGAGGGTTTCGCGGAGGTGGCCTCGGTGGAGGTTTTGGTGGCGGTGGCGGTGGAGGTTTTGGTGGCGGAGTTGGAGGTGGATTTGGTGGGGGAGCTGGTGGTGGGTTTGGTGGTGGAGCTGGTGGCGGCGGCGGTCTAGGCGGTGGAGGTGGGTTGGGAGGTGGCGGTGGTTTGGGTGGTGGAGGAGGGCTTGGAGGCGGTGGTGGTTTGGGTGGTGGAGGAGGGCTTGGAGGCGGTGGTGGTTTGGGTGGTGGAGGAGGCTTAGGGCATGGCATTTATAAAAGGGGGTTTAAAAGTGGAGGACTAGGTGGTGGTGGTGGATTGGGTGGTGGTGGAGGGCTCGGCGGAGGAGGTGGTTTAGGAGGTGGAGGAGGCATTGGGCATGGTATTTACAAAAGGGGTTTTAAGGGTGGAGGACTTGGAGGTGGAGGTGGTATTGGCGGCGGCGGAGGACTTGGAGGTGGTAGCGGTCTAGGTGGCGGCGGAGGACTTGGAGGTGGAGGTGGTCTTGGTGGTGGCGGAGGACTTGGAGGTGTTGGTGGTCTCGGTGGAGGTGGAGGACTTGGAGGAGGAGTTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGCGGTCTAGGTGGAGGAGCTGGTGGCGGTCTAGGTGGAGGAGCTGGTGGGGGTCTGGGAGTTGGAGCTGGTGGGGGTCTGGGAGGAGGAGCTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGTGGGTTTGGTGGCGGAGGTGGTGTAGGTTCTGGAGTCGGATTTGGAGGAGGAGCAGGAAGTGGAGTTGGTATTGGTGGTGGCGGTGGGGGTGGCGGAGGGTTCGGCGGAGGTGGTGGCATAGGTGGTGGTGCCGGTTTCGGCGGTGGAGCGGGGTTTGGCGGTGGTGGCGGCCACCAC

mRNA sequence

GTTTGATCTCTGTGTTCTCAGAGCAAAGCTACCAATGGCGTCTTTCTCACTGCGTGCAGTGGCTTTTTGGGTGTGTGTGGGGATTGCCTTGGTCGGAGCCGACAATGTGGTAGAAGATGACAAGCGTTTGTTTCATCGGCCACTTGGTTTTTTGAAGGGTAGAGGGTTTCGCGGAGGTGGCCTCGGTGGAGGTTTTGGTGGCGGTGGCGGTGGAGGTTTTGGTGGCGGAGTTGGAGGTGGATTTGGTGGGGGAGCTGGTGGTGGGTTTGGTGGTGGAGCTGGTGGCGGCGGCGGTCTAGGCGGTGGAGGTGGGTTGGGAGGTGGCGGTGGTTTGGGTGGTGGAGGAGGGCTTGGAGGCGGTGGTGGTTTGGGTGGTGGAGGAGGGCTTGGAGGCGGTGGTGGTTTGGGTGGTGGAGGAGGCTTAGGGCATGGCATTTATAAAAGGGGGTTTAAAAGTGGAGGACTAGGTGGTGGTGGTGGATTGGGTGGTGGTGGAGGGCTCGGCGGAGGAGGTGGTTTAGGAGGTGGAGGAGGCATTGGGCATGGTATTTACAAAAGGGGTTTTAAGGGTGGAGGACTTGGAGGTGGAGGTGGTATTGGCGGCGGCGGAGGACTTGGAGGTGGTAGCGGTCTAGGTGGCGGCGGAGGACTTGGAGGTGGAGGTGGTCTTGGTGGTGGCGGAGGACTTGGAGGTGTTGGTGGTCTCGGTGGAGGTGGAGGACTTGGAGGAGGAGTTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGCGGTCTAGGTGGAGGAGCTGGTGGCGGTCTAGGTGGAGGAGCTGGTGGGGGTCTGGGAGTTGGAGCTGGTGGGGGTCTGGGAGGAGGAGCTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGTGGGTTTGGTGGCGGAGGTGGTGGTGGTGCCGGTTTCGGCGGTGGAGCGGGGTTTGGCGGTGGTGGCGGCCACCAC

Coding sequence (CDS)

ATGGCGTCTTTCTCACTGCGTGCAGTGGCTTTTTGGGTGTGTGTGGGGATTGCCTTGGTCGGAGCCGACAATGTGGTAGAAGATGACAAGCGTTTGTTTCATCGGCCACTTGGTTTTTTGAAGGGTAGAGGGTTTCGCGGAGGTGGCCTCGGTGGAGGTTTTGGTGGCGGTGGCGGTGGAGGTTTTGGTGGCGGAGTTGGAGGTGGATTTGGTGGGGGAGCTGGTGGTGGGTTTGGTGGTGGAGCTGGTGGCGGCGGCGGTCTAGGCGGTGGAGGTGGGTTGGGAGGTGGCGGTGGTTTGGGTGGTGGAGGAGGGCTTGGAGGCGGTGGTGGTTTGGGTGGTGGAGGAGGGCTTGGAGGCGGTGGTGGTTTGGGTGGTGGAGGAGGCTTAGGGCATGGCATTTATAAAAGGGGGTTTAAAAGTGGAGGACTAGGTGGTGGTGGTGGATTGGGTGGTGGTGGAGGGCTCGGCGGAGGAGGTGGTTTAGGAGGTGGAGGAGGCATTGGGCATGGTATTTACAAAAGGGGTTTTAAGGGTGGAGGACTTGGAGGTGGAGGTGGTATTGGCGGCGGCGGAGGACTTGGAGGTGGTAGCGGTCTAGGTGGCGGCGGAGGACTTGGAGGTGGAGGTGGTCTTGGTGGTGGCGGAGGACTTGGAGGTGTTGGTGGTCTCGGTGGAGGTGGAGGACTTGGAGGAGGAGTTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGCGGTCTAGGTGGAGGAGCTGGTGGCGGTCTAGGTGGAGGAGCTGGTGGGGGTCTGGGAGTTGGAGCTGGTGGGGGTCTGGGAGGAGGAGCTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGTGGGTTTGGTGGCGGAGGTGGTGGTGGTGCCGGTTTCGGCGGTGGAGCGGGGTTTGGCGGTGGTGGCGGCCACCAC

Protein sequence

MASFSLRAVAFWVCVGIALVGADNVVEDDKRLFHRPLGFLKGRGFRGGGLGGGFGGGGGGGFGGGVGGGFGGGAGGGFGGGAGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKGGGLGGGGGIGGGGGLGGGSGLGGGGGLGGGGGLGGGGGLGGVGGLGGGGGLGGGVGGGLGGGAGGGLGGGAGGGLGGGAGGGLGVGAGGGLGGGAGGGLGGGAGGGFGGGGGGGAGFGGGAGFGGGGGHH
BLAST of Cp4.1LG03g18450 vs. TrEMBL
Match: A0A0A0L443_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G131980 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.8e-39
Identity = 249/314 (79.30%), Postives = 253/314 (80.57%), Query Frame = 1

Query: 1   MASFSLRAVAFWVCVGIALVGADNVVEDDKRLFHRPLGFLKGRG-FRGGGLGGGFGGGGG 60
           MA FSLRAV F  CV IALV ADN VED+K LFHRPLGF KGR  FRGGGLGGG GGGGG
Sbjct: 1   MARFSLRAVVFCFCVLIALVAADNNVEDNKGLFHRPLGFYKGRKRFRGGGLGGGIGGGGG 60

Query: 61  GGFGGGVGGGFGGGAGGGFGGGAGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLG 120
             FGGG GGG G G GGG GGG G GGG GG      GGGLGGGGGLGGGGGLGGGGGLG
Sbjct: 61  --FGGGAGGGGGLGGGGGLGGGGGFGGGAGG------GGGLGGGGGLGGGGGLGGGGGLG 120

Query: 121 GGGGLGGGGGLGHGIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKG 180
           GGGGLGGGGGLGHGIYKRG+K GGLGGGGGLGGGGGLGGGGGL      GHGIYKRGFK 
Sbjct: 121 GGGGLGGGGGLGHGIYKRGYKRGGLGGGGGLGGGGGLGGGGGL------GHGIYKRGFKR 180

Query: 181 GGLGGGGGIGGGGGLGGGSGLGGGGGLGGGGGLGGGGGLGGVGGLGGGGGLGGGVGGGLG 240
           GGLGGGGG+GGGGGLGGG GLGGGGGLGGGGGLGGGGGLGG GGLGGGGG G G GGGLG
Sbjct: 181 GGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGGGFGGGGGLG 240

Query: 241 GGAGGGLGGGAGGGLGGGAGGGL----GVGAGGGLGGGAGGGLGGGAGGGFGGGGGGGAG 300
           GG+GGGLGGG GGG GGGAGGG     G G GGG GGG G G GGG GGG GGG GGG G
Sbjct: 241 GGSGGGLGGGVGGGYGGGAGGGFGGGGGAGGGGGFGGGGGAGGGGGIGGGAGGGYGGGGG 298

Query: 301 FGGGAGFGGGGGHH 310
           FGGG GF  GGGHH
Sbjct: 301 FGGGGGF--GGGHH 298

BLAST of Cp4.1LG03g18450 vs. TrEMBL
Match: A0A067KT37_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01138 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.0e-07
Identity = 221/314 (70.38%), Postives = 227/314 (72.29%), Query Frame = 1

Query: 15  VGIALVGADNVVEDDKR----LFHRPL-------GFLKGRGFRGGGLGGGFGGGGGGGFG 74
           V    V AD V  DDK     LFHRPL       G  K +GF+ GGLGGG GGG GGGFG
Sbjct: 21  VSAVFVLADRVNVDDKDDKHLLFHRPLLGGGLGHGIYK-KGFKHGGLGGGIGGGAGGGFG 80

Query: 75  GGVGGGFGGGAGGGFGGGAGGGGGLGGGGGLGGGGGLGG--GGGLGGGGGLGGGGGLGGG 134
           GG GGGFGGGAGGGFGGGAG     GG   LGGGGGLGG  GGGLGGGGGLGGG G G G
Sbjct: 81  GGAGGGFGGGAGGGFGGGAG-----GG---LGGGGGLGGGAGGGLGGGGGLGGGAGGGLG 140

Query: 135 GGLGGGGGLGHGIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKGGG 194
           GG+G GGGLG GI   G   GG+G GGGLGGGGGLGGG G G GGG           GGG
Sbjct: 141 GGIGHGGGLGGGIGHGGGLGGGIGHGGGLGGGGGLGGGAGGGLGGG----------HGGG 200

Query: 195 LGGGGGIGG--GGGLGGGSGLGG--GGGLGGGGGLGG--GGGLGGVGGLGG--GGGLGGG 254
           LGGGGG+GG  GGGLGGG GLGG  GGGLGGGGGLGG  GGGLGG GGLGG  GGGLGGG
Sbjct: 201 LGGGGGLGGGHGGGLGGGGGLGGGHGGGLGGGGGLGGGHGGGLGGGGGLGGGHGGGLGGG 260

Query: 255 VGGGLGGGAGGGLGGGAGGGLGGGAGGGLGVGAGGGLGGGAGGGLGGGAGGGFGGGGGGG 308
            GGGLGGG GGGLGG  GGG+GGGAGGGLG G GGGLGGGAGGGLGGG GGG GGGGG G
Sbjct: 261 AGGGLGGGHGGGLGG--GGGIGGGAGGGLGGGHGGGLGGGAGGGLGGGHGGGLGGGGGLG 313

BLAST of Cp4.1LG03g18450 vs. TrEMBL
Match: M4DZ60_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.1e-06
Identity = 138/178 (77.53%), Postives = 143/178 (80.34%), Query Frame = 1

Query: 132 HGIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKGGGLGGGGGIGGG 191
           HGIYK+GF+ G LGGGGGLGGGGGLGGGGGLGGGGG+G G        GGLGGGGG+GGG
Sbjct: 52  HGIYKKGFRKG-LGGGGGLGGGGGLGGGGGLGGGGGLGGG--------GGLGGGGGLGGG 111

Query: 192 GGLGGGSGLGGGGGLGGGGGLGGGGGLGGVGGLGGGGGLGGGVGGGLGGGAGGGLGGGAG 251
           GGLG G GLGGGGGLG GGGLGGGGGLGG GGLGGGGGLGGG  GG+GGGAGGG GGGAG
Sbjct: 112 GGLGHGGGLGGGGGLGHGGGLGGGGGLGGGGGLGGGGGLGGG--GGVGGGAGGGYGGGAG 171

Query: 252 GGLGGGAGGGLGVGAGGGLGGGAGGGLGGGAGGGFGGGGGGGAGFGGGAGFGGGGGHH 310
           GGLGGG G G G G GGG G G GGG GGGAGGGFG G GGG G GGG    GGGGHH
Sbjct: 172 GGLGGGGGAGGGGGFGGGGGYGGGGGFGGGAGGGFGKGIGGGGGLGGGY---GGGGHH 215

BLAST of Cp4.1LG03g18450 vs. TrEMBL
Match: M4E295_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.9e-06
Identity = 157/232 (67.67%), Postives = 163/232 (70.26%), Query Frame = 1

Query: 26  VEDDKRLFHRPLGFLKGRGFRGGGLGGGFGGGGGGGFGGGVGGGFGGGAGGGFGGGAGGG 85
           V+DDK LFH+P  F   +GFR G LGGG                          GG GGG
Sbjct: 28  VKDDKHLFHKPRPFFHKKGFRKG-LGGG--------------------------GGLGGG 87

Query: 86  GGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKSGGLG 145
           GGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGHG        GGLG
Sbjct: 88  GGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGHG--------GGLG 147

Query: 146 GGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKGGGLGGGGGIGGGGGLGGGSGLGGGGG 205
           GGGGLGGGGGLG GGGLGGGGG+G         GGGLGGGGG+GGGGGLGGG+  GGG G
Sbjct: 148 GGGGLGGGGGLGHGGGLGGGGGVG--------GGGGLGGGGGLGGGGGLGGGA--GGGYG 207

Query: 206 LGGGGGLGGGGGLGGVGGLGGGGGLGGGVGGGLGGGAGGGLGGGAGGGLGGG 258
            G GGGLGGGGG GG GG GGGGG GG  GGG GGGAGG  GGG GGG GGG
Sbjct: 208 GGAGGGLGGGGGAGGGGGFGGGGGYGG--GGGFGGGAGG--GGGFGGGYGGG 210

BLAST of Cp4.1LG03g18450 vs. TrEMBL
Match: A0A078G3B1_BRANA (BnaA04g18980D protein OS=Brassica napus GN=BnaA04g18980D PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.3e-06
Identity = 136/179 (75.98%), Postives = 141/179 (78.77%), Query Frame = 1

Query: 132 HGIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKGGGLGGGGGIGGG 191
           HGIYK+GF+  GLGGGGGLGGGGGLGGGGGLGGGGG+G         GGGLGGGGG+GGG
Sbjct: 52  HGIYKKGFRK-GLGGGGGLGGGGGLGGGGGLGGGGGLG--------GGGGLGGGGGLGGG 111

Query: 192 GGLGGGSGLGGGGGLG-GGGGLGGGGGLGGVGGLGGGGGLGGGVGGGLGGGAGGGLGGGA 251
           GGLG G GLGGGGGLG GGGGLGGGGGLGG GGLGGGGG+GGG GGG GGGAGGGLGG  
Sbjct: 112 GGLGHGGGLGGGGGLGHGGGGLGGGGGLGGGGGLGGGGGVGGGAGGGYGGGAGGGLGG-- 171

Query: 252 GGGLGGGAGGGLGVGAGGGLGGGAGGGLGGGAGGGFGGGGGGGAGFGGGAGFGGGGGHH 310
               GGGAGGG G G GGG GG  GGG GGGAGGGFG G GGG G GGG    GGGGHH
Sbjct: 172 ----GGGAGGGGGFGGGGGYGG--GGGFGGGAGGGFGKGIGGGGGLGGGY---GGGGHH 210

BLAST of Cp4.1LG03g18450 vs. TAIR10
Match: AT2G32690.1 (AT2G32690.1 glycine-rich protein 23)

HSP 1 Score: 55.8 bits (133), Expect = 5.3e-08
Identity = 132/178 (74.16%), Postives = 135/178 (75.84%), Query Frame = 1

Query: 132 HGIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKGGGLGGGGGIGGG 191
           HGIYK+GF  G LGGGGGLGGGGGLGGGGGLGG              GGGLGGGGG+GGG
Sbjct: 52  HGIYKKGFGKG-LGGGGGLGGGGGLGGGGGLGG--------------GGGLGGGGGLGGG 111

Query: 192 GGLGGGSGLGGGGGLGGGGGLGGGGGLGGVGGLGGGGGLGGGVGGGLGGGAGGGLGGGAG 251
           GGLGGGSGLGGGGGLGGG GLGGGGGLGG    GGGGGLGG  GGGLGGGAGGG GGGAG
Sbjct: 112 GGLGGGSGLGGGGGLGGGSGLGGGGGLGG----GGGGGLGG--GGGLGGGAGGGYGGGAG 171

Query: 252 GGLGGGAGGGLGVGAGGGLGGGAGGGLGGGAGGGFGGGGGGGAGFGGGAGFGGGGGHH 310
           GGLGGG     G+G GGG GGG GGG GGGAGGGFG G GGG G GGG     GGGHH
Sbjct: 172 GGLGGGG----GIGGGGGFGGGGGGGFGGGAGGGFGKGIGGGGGLGGGY---VGGGHH 201

BLAST of Cp4.1LG03g18450 vs. NCBI nr
Match: gi|778688443|ref|XP_011652751.1| (PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis sativus])

HSP 1 Score: 170.2 bits (430), Expect = 5.5e-39
Identity = 249/314 (79.30%), Postives = 253/314 (80.57%), Query Frame = 1

Query: 1   MASFSLRAVAFWVCVGIALVGADNVVEDDKRLFHRPLGFLKGRG-FRGGGLGGGFGGGGG 60
           MA FSLRAV F  CV IALV ADN VED+K LFHRPLGF KGR  FRGGGLGGG GGGGG
Sbjct: 1   MARFSLRAVVFCFCVLIALVAADNNVEDNKGLFHRPLGFYKGRKRFRGGGLGGGIGGGGG 60

Query: 61  GGFGGGVGGGFGGGAGGGFGGGAGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLG 120
             FGGG GGG G G GGG GGG G GGG GG      GGGLGGGGGLGGGGGLGGGGGLG
Sbjct: 61  --FGGGAGGGGGLGGGGGLGGGGGFGGGAGG------GGGLGGGGGLGGGGGLGGGGGLG 120

Query: 121 GGGGLGGGGGLGHGIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKG 180
           GGGGLGGGGGLGHGIYKRG+K GGLGGGGGLGGGGGLGGGGGL      GHGIYKRGFK 
Sbjct: 121 GGGGLGGGGGLGHGIYKRGYKRGGLGGGGGLGGGGGLGGGGGL------GHGIYKRGFKR 180

Query: 181 GGLGGGGGIGGGGGLGGGSGLGGGGGLGGGGGLGGGGGLGGVGGLGGGGGLGGGVGGGLG 240
           GGLGGGGG+GGGGGLGGG GLGGGGGLGGGGGLGGGGGLGG GGLGGGGG G G GGGLG
Sbjct: 181 GGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGGGFGGGGGLG 240

Query: 241 GGAGGGLGGGAGGGLGGGAGGGL----GVGAGGGLGGGAGGGLGGGAGGGFGGGGGGGAG 300
           GG+GGGLGGG GGG GGGAGGG     G G GGG GGG G G GGG GGG GGG GGG G
Sbjct: 241 GGSGGGLGGGVGGGYGGGAGGGFGGGGGAGGGGGFGGGGGAGGGGGIGGGAGGGYGGGGG 298

Query: 301 FGGGAGFGGGGGHH 310
           FGGG GF  GGGHH
Sbjct: 301 FGGGGGF--GGGHH 298

BLAST of Cp4.1LG03g18450 vs. NCBI nr
Match: gi|659077739|ref|XP_008439359.1| (PREDICTED: glycine-rich cell wall structural protein-like [Cucumis melo])

HSP 1 Score: 132.1 bits (331), Expect = 1.7e-27
Identity = 166/225 (73.78%), Postives = 172/225 (76.44%), Query Frame = 1

Query: 1   MASFSLRAVAFWVCVGIALVGADNVVEDDKRLFHRPLGFLKGRG-FRGGGLGGGFGGGGG 60
           MA FSLRAV F  CV IA VGADN VED+K LFHRPLGF+KGR  FRGGGLGGG GGGGG
Sbjct: 1   MACFSLRAVVFCFCVLIAFVGADNNVEDNKGLFHRPLGFIKGRKRFRGGGLGGGIGGGGG 60

Query: 61  GGFGGGVGGGFGGGAGGGFGGGAGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLG 120
             FGGG GGGFGGGAGGGFGGG                GGLGGGGGLGGGGGLGGGGGLG
Sbjct: 61  --FGGGAGGGFGGGAGGGFGGG----------------GGLGGGGGLGGGGGLGGGGGLG 120

Query: 121 GGGGLGGGGGLGHGIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGG-----GGGIGHGIYK 180
           GGGGLGGGGGLGHGI+KRG+K GGLGGGGGLGGGGGLGGGGGLGG     GGG G G   
Sbjct: 121 GGGGLGGGGGLGHGIHKRGYKRGGLGGGGGLGGGGGLGGGGGLGGVGGGYGGGAGGGFGG 180

Query: 181 RGFKGGG--LGGGGGIGGGGGLGGGSG--LGGGGGLGGGGGLGGG 216
            G  GGG   GGGGG GGGGG+GGG+G   GGGGG GGGGG GGG
Sbjct: 181 GGGAGGGGGFGGGGGAGGGGGIGGGAGGGFGGGGGFGGGGGYGGG 207

BLAST of Cp4.1LG03g18450 vs. NCBI nr
Match: gi|923568584|ref|XP_013739004.1| (PREDICTED: glycine-rich cell wall structural protein 1 [Brassica napus])

HSP 1 Score: 75.1 bits (183), Expect = 2.4e-10
Identity = 167/252 (66.27%), Postives = 170/252 (67.46%), Query Frame = 1

Query: 26  VEDDKRLFHRPLGFLKGRGFRGGGLGGGFGGGGGGGFGGGVGGGFGGGAGGGFGGGAGGG 85
           V+DDK LFH+P  F   +GFR G LGGG                          GG GGG
Sbjct: 28  VKDDKHLFHKPRPFFHKKGFRKG-LGGG--------------------------GGLGGG 87

Query: 86  GGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKSGGLG 145
           GGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGHG        GGLG
Sbjct: 88  GGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGHG--------GGLG 147

Query: 146 GGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKGGGLGGGGGIGGGGGLGGGSGLGGGGG 205
           GGGGLGGGGGLG GGGL                          GGGGGLGGG GLG GGG
Sbjct: 148 GGGGLGGGGGLGHGGGL--------------------------GGGGGLGGGGGLGHGGG 207

Query: 206 LGGGGGLGGGGGLGGVGGLGGGGGLGGGVGGGLGGGAGGGLGGGAGGGLGGGAGGGLGVG 265
           LGGGGGLGGGGGLGG GGLGGGGGLGGG GGG GGGAGGGLGGG G G GGG GGG G G
Sbjct: 208 LGGGGGLGGGGGLGGGGGLGGGGGLGGGAGGGYGGGAGGGLGGGGGAGGGGGFGGGGGYG 218

Query: 266 AGGGLGGGAGGG 278
            GGGLGGGAGGG
Sbjct: 268 GGGGLGGGAGGG 218

BLAST of Cp4.1LG03g18450 vs. NCBI nr
Match: gi|685283915|ref|XP_009132861.1| (PREDICTED: glycine-rich cell wall structural protein-like isoform X1 [Brassica rapa])

HSP 1 Score: 65.1 bits (157), Expect = 2.5e-07
Identity = 143/186 (76.88%), Postives = 147/186 (79.03%), Query Frame = 1

Query: 105 GLGGGGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGG 164
           GLGGGGGLGGGGGLGGGGGLGGGGGLG G        GGLGGGGGLGGGGGLGGGGGLGG
Sbjct: 50  GLGGGGGLGGGGGLGGGGGLGGGGGLGGG--------GGLGGGGGLGGGGGLGGGGGLGG 109

Query: 165 GGGIGHGIYKRGFKGGGLGGGGGIGGGGGLGGGSGLGGGGGLGGGGGLGGGGGLGGVGGL 224
           GGG+GH              GGG+GGGGGLGGG GLG GGGLGGGGG+GGGGGLGG GGL
Sbjct: 110 GGGLGH--------------GGGLGGGGGLGGGGGLGHGGGLGGGGGVGGGGGLGGGGGL 169

Query: 225 GGGGGLGGGVGGGLGGGAGGGLGGGAGGGLGGGAGGGLGVGAGGGLGGGAGGGLGGGAGG 284
           GGGGGLGGG GGG GGGAGGGLGGG G G GGG GGG G G GGG GGGAGG  GGG GG
Sbjct: 170 GGGGGLGGGAGGGYGGGAGGGLGGGGGAGGGGGFGGGGGYGGGGGFGGGAGG--GGGFGG 211

Query: 285 GFGGGG 291
           G+GGGG
Sbjct: 230 GYGGGG 211

BLAST of Cp4.1LG03g18450 vs. NCBI nr
Match: gi|674914086|emb|CDY19158.1| (BnaA04g18980D [Brassica napus])

HSP 1 Score: 63.9 bits (154), Expect = 5.5e-07
Identity = 127/166 (76.51%), Postives = 133/166 (80.12%), Query Frame = 1

Query: 132 HGIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKGGGLGGGGGIGGG 191
           HGIYK+GF+ G LGGGGGLGGGGGLGGGGGLGGGGG+G G        GGLGGGGG+GGG
Sbjct: 52  HGIYKKGFRKG-LGGGGGLGGGGGLGGGGGLGGGGGLGGG--------GGLGGGGGLGGG 111

Query: 192 GGLGGGSGLGGGGGLG-GGGGLGGGGGLGGVGGLGGGGGLGGGVGGGLGGGAGGGLGGGA 251
           GGLG G GLGGGGGLG GGGGLGGGGGLGG GGLGGGGG+GGG GGG GGGAGGGLGGG 
Sbjct: 112 GGLGHGGGLGGGGGLGHGGGGLGGGGGLGGGGGLGGGGGVGGGAGGGYGGGAGGGLGGGG 171

Query: 252 GGGLGGGAGGGLGVGAGGGLGGGAGGGL------GGGAGGGFGGGG 291
           G G GGG GGG G G GGG GGGAGGG       GGG GGG+GGGG
Sbjct: 172 GAGGGGGFGGGGGYGGGGGFGGGAGGGFGKGIGGGGGLGGGYGGGG 208

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L443_CUCSA3.8e-3979.30Uncharacterized protein OS=Cucumis sativus GN=Csa_3G131980 PE=4 SV=1[more]
A0A067KT37_JATCU5.0e-0770.38Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01138 PE=4 SV=1[more]
M4DZ60_BRARP1.1e-0677.53Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
M4E295_BRARP1.9e-0667.67Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
A0A078G3B1_BRANA3.3e-0675.98BnaA04g18980D protein OS=Brassica napus GN=BnaA04g18980D PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G32690.15.3e-0874.16 glycine-rich protein 23[more]
Match NameE-valueIdentityDescription
gi|778688443|ref|XP_011652751.1|5.5e-3979.30PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis sativus][more]
gi|659077739|ref|XP_008439359.1|1.7e-2773.78PREDICTED: glycine-rich cell wall structural protein-like [Cucumis melo][more]
gi|923568584|ref|XP_013739004.1|2.4e-1066.27PREDICTED: glycine-rich cell wall structural protein 1 [Brassica napus][more]
gi|685283915|ref|XP_009132861.1|2.5e-0776.88PREDICTED: glycine-rich cell wall structural protein-like isoform X1 [Brassica r... [more]
gi|674914086|emb|CDY19158.1|5.5e-0776.51BnaA04g18980D [Brassica napus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g18450.1Cp4.1LG03g18450.1mRNA


The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g18450Cucurbita pepo (Zucchini)cpecpeB184
Cp4.1LG03g18450Cucurbita pepo (Zucchini)cpecpeB265
Cp4.1LG03g18450Cucurbita pepo (Zucchini)cpecpeB333
Cp4.1LG03g18450Cucurbita pepo (Zucchini)cpecpeB478
Cp4.1LG03g18450Cucurbita pepo (Zucchini)cpecpeB482
Cp4.1LG03g18450Cucumber (Gy14) v1cgycpeB0682
Cp4.1LG03g18450Cucurbita maxima (Rimu)cmacpeB402
Cp4.1LG03g18450Cucurbita maxima (Rimu)cmacpeB640
Cp4.1LG03g18450Cucurbita maxima (Rimu)cmacpeB837
Cp4.1LG03g18450Cucurbita maxima (Rimu)cmacpeB928
Cp4.1LG03g18450Cucurbita moschata (Rifu)cmocpeB364
Cp4.1LG03g18450Cucurbita moschata (Rifu)cmocpeB590
Cp4.1LG03g18450Cucurbita moschata (Rifu)cmocpeB787
Cp4.1LG03g18450Cucurbita moschata (Rifu)cmocpeB862
Cp4.1LG03g18450Wild cucumber (PI 183967)cpecpiB610
Cp4.1LG03g18450Bottle gourd (USVL1VR-Ls)cpelsiB484
Cp4.1LG03g18450Bottle gourd (USVL1VR-Ls)cpelsiB506
Cp4.1LG03g18450Watermelon (Charleston Gray)cpewcgB559
Cp4.1LG03g18450Watermelon (Charleston Gray)cpewcgB561
Cp4.1LG03g18450Watermelon (97103) v1cpewmB622
Cp4.1LG03g18450Silver-seed gourdcarcpeB0327
Cp4.1LG03g18450Melon (DHL92) v3.5.1cpemeB578
Cp4.1LG03g18450Cucumber (Gy14) v2cgybcpeB404
Cp4.1LG03g18450Cucumber (Gy14) v2cgybcpeB406
Cp4.1LG03g18450Melon (DHL92) v3.6.1cpemedB685
Cp4.1LG03g18450Melon (DHL92) v3.6.1cpemedB693
Cp4.1LG03g18450Silver-seed gourdcarcpeB0250
Cp4.1LG03g18450Silver-seed gourdcarcpeB1098
Cp4.1LG03g18450Silver-seed gourdcarcpeB1331
Cp4.1LG03g18450Silver-seed gourdcarcpeB1504
Cp4.1LG03g18450Cucumber (Chinese Long) v3cpecucB0755
Cp4.1LG03g18450Cucumber (Chinese Long) v3cpecucB0759
Cp4.1LG03g18450Wax gourdcpewgoB0765
Cp4.1LG03g18450Wax gourdcpewgoB0784
Cp4.1LG03g18450Wax gourdcpewgoB0800