Cp4.1LG03g18450 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTTGATCTCTGTGTTCTCAGAGCAAAGCTACCAATGGCGTCTTTCTCACTGCGTGCAGTGGCTTTTTGGGTGTGTGTGGGGATTGCCTTGGTCGGAGCCGACAATGTGGTAGAAGATGACAAGCGTTTGTTTCATCGGCCACTTGGTTTTTTGAAGGGTAGAGGGTTTCGCGGAGGTGGCCTCGGTGGAGGTTTTGGTGGCGGTGGCGGTGGAGGTTTTGGTGGCGGAGTTGGAGGTGGATTTGGTGGGGGAGCTGGTGGTGGGTTTGGTGGTGGAGCTGGTGGCGGCGGCGGTCTAGGCGGTGGAGGTGGGTTGGGAGGTGGCGGTGGTTTGGGTGGTGGAGGAGGGCTTGGAGGCGGTGGTGGTTTGGGTGGTGGAGGAGGGCTTGGAGGCGGTGGTGGTTTGGGTGGTGGAGGAGGCTTAGGGCATGGCATTTATAAAAGGGGGTTTAAAAGTGGAGGACTAGGTGGTGGTGGTGGATTGGGTGGTGGTGGAGGGCTCGGCGGAGGAGGTGGTTTAGGAGGTGGAGGAGGCATTGGGCATGGTATTTACAAAAGGGGTTTTAAGGGTGGAGGACTTGGAGGTGGAGGTGGTATTGGCGGCGGCGGAGGACTTGGAGGTGGTAGCGGTCTAGGTGGCGGCGGAGGACTTGGAGGTGGAGGTGGTCTTGGTGGTGGCGGAGGACTTGGAGGTGTTGGTGGTCTCGGTGGAGGTGGAGGACTTGGAGGAGGAGTTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGCGGTCTAGGTGGAGGAGCTGGTGGCGGTCTAGGTGGAGGAGCTGGTGGGGGTCTGGGAGTTGGAGCTGGTGGGGGTCTGGGAGGAGGAGCTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGTGGGTTTGGTGGCGGAGGTGGTGTAGGTTCTGGAGTCGGATTTGGAGGAGGAGCAGGAAGTGGAGTTGGTATTGGTGGTGGCGGTGGGGGTGGCGGAGGGTTCGGCGGAGGTGGTGGCATAGGTGGTGGTGCCGGTTTCGGCGGTGGAGCGGGGTTTGGCGGTGGTGGCGGCCACCAC GTTTGATCTCTGTGTTCTCAGAGCAAAGCTACCAATGGCGTCTTTCTCACTGCGTGCAGTGGCTTTTTGGGTGTGTGTGGGGATTGCCTTGGTCGGAGCCGACAATGTGGTAGAAGATGACAAGCGTTTGTTTCATCGGCCACTTGGTTTTTTGAAGGGTAGAGGGTTTCGCGGAGGTGGCCTCGGTGGAGGTTTTGGTGGCGGTGGCGGTGGAGGTTTTGGTGGCGGAGTTGGAGGTGGATTTGGTGGGGGAGCTGGTGGTGGGTTTGGTGGTGGAGCTGGTGGCGGCGGCGGTCTAGGCGGTGGAGGTGGGTTGGGAGGTGGCGGTGGTTTGGGTGGTGGAGGAGGGCTTGGAGGCGGTGGTGGTTTGGGTGGTGGAGGAGGGCTTGGAGGCGGTGGTGGTTTGGGTGGTGGAGGAGGCTTAGGGCATGGCATTTATAAAAGGGGGTTTAAAAGTGGAGGACTAGGTGGTGGTGGTGGATTGGGTGGTGGTGGAGGGCTCGGCGGAGGAGGTGGTTTAGGAGGTGGAGGAGGCATTGGGCATGGTATTTACAAAAGGGGTTTTAAGGGTGGAGGACTTGGAGGTGGAGGTGGTATTGGCGGCGGCGGAGGACTTGGAGGTGGTAGCGGTCTAGGTGGCGGCGGAGGACTTGGAGGTGGAGGTGGTCTTGGTGGTGGCGGAGGACTTGGAGGTGTTGGTGGTCTCGGTGGAGGTGGAGGACTTGGAGGAGGAGTTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGCGGTCTAGGTGGAGGAGCTGGTGGCGGTCTAGGTGGAGGAGCTGGTGGGGGTCTGGGAGTTGGAGCTGGTGGGGGTCTGGGAGGAGGAGCTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGTGGGTTTGGTGGCGGAGGTGGTGGTGGTGCCGGTTTCGGCGGTGGAGCGGGGTTTGGCGGTGGTGGCGGCCACCAC ATGGCGTCTTTCTCACTGCGTGCAGTGGCTTTTTGGGTGTGTGTGGGGATTGCCTTGGTCGGAGCCGACAATGTGGTAGAAGATGACAAGCGTTTGTTTCATCGGCCACTTGGTTTTTTGAAGGGTAGAGGGTTTCGCGGAGGTGGCCTCGGTGGAGGTTTTGGTGGCGGTGGCGGTGGAGGTTTTGGTGGCGGAGTTGGAGGTGGATTTGGTGGGGGAGCTGGTGGTGGGTTTGGTGGTGGAGCTGGTGGCGGCGGCGGTCTAGGCGGTGGAGGTGGGTTGGGAGGTGGCGGTGGTTTGGGTGGTGGAGGAGGGCTTGGAGGCGGTGGTGGTTTGGGTGGTGGAGGAGGGCTTGGAGGCGGTGGTGGTTTGGGTGGTGGAGGAGGCTTAGGGCATGGCATTTATAAAAGGGGGTTTAAAAGTGGAGGACTAGGTGGTGGTGGTGGATTGGGTGGTGGTGGAGGGCTCGGCGGAGGAGGTGGTTTAGGAGGTGGAGGAGGCATTGGGCATGGTATTTACAAAAGGGGTTTTAAGGGTGGAGGACTTGGAGGTGGAGGTGGTATTGGCGGCGGCGGAGGACTTGGAGGTGGTAGCGGTCTAGGTGGCGGCGGAGGACTTGGAGGTGGAGGTGGTCTTGGTGGTGGCGGAGGACTTGGAGGTGTTGGTGGTCTCGGTGGAGGTGGAGGACTTGGAGGAGGAGTTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGCGGTCTAGGTGGAGGAGCTGGTGGCGGTCTAGGTGGAGGAGCTGGTGGGGGTCTGGGAGTTGGAGCTGGTGGGGGTCTGGGAGGAGGAGCTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGTGGGTTTGGTGGCGGAGGTGGTGGTGGTGCCGGTTTCGGCGGTGGAGCGGGGTTTGGCGGTGGTGGCGGCCACCAC MASFSLRAVAFWVCVGIALVGADNVVEDDKRLFHRPLGFLKGRGFRGGGLGGGFGGGGGGGFGGGVGGGFGGGAGGGFGGGAGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKGGGLGGGGGIGGGGGLGGGSGLGGGGGLGGGGGLGGGGGLGGVGGLGGGGGLGGGVGGGLGGGAGGGLGGGAGGGLGGGAGGGLGVGAGGGLGGGAGGGLGGGAGGGFGGGGGGGAGFGGGAGFGGGGGHH
BLAST of Cp4.1LG03g18450 vs. TrEMBL
Match: A0A0A0L443_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G131980 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 3.8e-39 Identity = 249/314 (79.30%), Postives = 253/314 (80.57%), Query Frame = 1
BLAST of Cp4.1LG03g18450 vs. TrEMBL
Match: A0A067KT37_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01138 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 5.0e-07 Identity = 221/314 (70.38%), Postives = 227/314 (72.29%), Query Frame = 1
BLAST of Cp4.1LG03g18450 vs. TrEMBL
Match: M4DZ60_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.1e-06 Identity = 138/178 (77.53%), Postives = 143/178 (80.34%), Query Frame = 1
BLAST of Cp4.1LG03g18450 vs. TrEMBL
Match: M4E295_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.9e-06 Identity = 157/232 (67.67%), Postives = 163/232 (70.26%), Query Frame = 1
BLAST of Cp4.1LG03g18450 vs. TrEMBL
Match: A0A078G3B1_BRANA (BnaA04g18980D protein OS=Brassica napus GN=BnaA04g18980D PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 3.3e-06 Identity = 136/179 (75.98%), Postives = 141/179 (78.77%), Query Frame = 1
BLAST of Cp4.1LG03g18450 vs. TAIR10
Match: AT2G32690.1 (AT2G32690.1 glycine-rich protein 23) HSP 1 Score: 55.8 bits (133), Expect = 5.3e-08 Identity = 132/178 (74.16%), Postives = 135/178 (75.84%), Query Frame = 1
BLAST of Cp4.1LG03g18450 vs. NCBI nr
Match: gi|778688443|ref|XP_011652751.1| (PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis sativus]) HSP 1 Score: 170.2 bits (430), Expect = 5.5e-39 Identity = 249/314 (79.30%), Postives = 253/314 (80.57%), Query Frame = 1
BLAST of Cp4.1LG03g18450 vs. NCBI nr
Match: gi|659077739|ref|XP_008439359.1| (PREDICTED: glycine-rich cell wall structural protein-like [Cucumis melo]) HSP 1 Score: 132.1 bits (331), Expect = 1.7e-27 Identity = 166/225 (73.78%), Postives = 172/225 (76.44%), Query Frame = 1
BLAST of Cp4.1LG03g18450 vs. NCBI nr
Match: gi|923568584|ref|XP_013739004.1| (PREDICTED: glycine-rich cell wall structural protein 1 [Brassica napus]) HSP 1 Score: 75.1 bits (183), Expect = 2.4e-10 Identity = 167/252 (66.27%), Postives = 170/252 (67.46%), Query Frame = 1
BLAST of Cp4.1LG03g18450 vs. NCBI nr
Match: gi|685283915|ref|XP_009132861.1| (PREDICTED: glycine-rich cell wall structural protein-like isoform X1 [Brassica rapa]) HSP 1 Score: 65.1 bits (157), Expect = 2.5e-07 Identity = 143/186 (76.88%), Postives = 147/186 (79.03%), Query Frame = 1
BLAST of Cp4.1LG03g18450 vs. NCBI nr
Match: gi|674914086|emb|CDY19158.1| (BnaA04g18980D [Brassica napus]) HSP 1 Score: 63.9 bits (154), Expect = 5.5e-07 Identity = 127/166 (76.51%), Postives = 133/166 (80.12%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |