CmoCh14G019370 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh14G019370
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr14 : 14345750 .. 14346724 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCTTTCTCTCTGCGTTCTGTGGCTTTTTGGGTGTGTGTGGGGATTGCCTTGGTCGGAGCCGACAATGTGGTAGAAGATGACAAGCGTTTGTTTCATCGGCCACTTGGTTTTTTGAAGGGGAGAGGGTTTCGCGGAGGCGGAGGTTTTGGTGGCGGTGGCGGTGGAGGTTTTGGAGGTGGAGTTGGAGGTGGATTTGGTGGGGGAGCTGGCGGTGGGTTTGGTGGTGGAGCTGGTGGCGGCGGCGGTCTAGGCGGTGGAGGTGGGTTGGGAGGTGGTGGTGGTTTGGGTGGTGGAGGAGGGCTTGGAGGAGGTGGTGGGCTTGGAGGCGGTGGTGGTTTGGGTGGTGGAGGAGGCTTAGGGCATGGCATTTATAAAAGGGGGTTTAAAAGTGGAGGGCTAGGTGGTGGCGGTGGATTGGGTGGTGGTGGAGGGCTCGGTGGAGGAGGTGGTTTAGGAGGTGGAGGAGGCATTGGGCATGGTATTTACAAAAGGGGTTTTAAGGGTGGAGGACTTGGAGGTGGAGGTGGTATTGGCGGCGGAGGAGGACTTGGAGGTGGAGGTGGTCTTGGTGGTGGCGGAGGACTTGGAGGTGGTCTTGGTGGTGGCGGAGGACTTGGAGGTGGAGGTGGTCTCGGTGGAGGTGGAGGACTTGGAGGAGGAGTTGGTAGCGGTCTTGGAGGAGGAGCTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGTGGTCTTGGAGGAGGAGCTGGTGGAGGTCTGGGAGGAGGAGCTGGTGGTGGGTTTGGTGGCGGAGGTGGTGTAGGTGCTGGAGGCGGATTTGGAGGAGGAGCAGGAAGTGGAGTTGGTATTGGTGGTGGAGGTGGCGGTGGCGGAGGGTTCGGCGGGGGTGGTGGCATTGGTGGTGGTGCCGGTTTCGGCGGTGGAGCGGGGTTTGGAGGTGGTGGCGGCCACCACTAA

mRNA sequence

ATGGCGTCTTTCTCTCTGCGTTCTGTGGCTTTTTGGGTGTGTGTGGGGATTGCCTTGGTCGGAGCCGACAATGTGGTAGAAGATGACAAGCGTTTGTTTCATCGGCCACTTGGTTTTTTGAAGGGGAGAGGGTTTCGCGGAGGCGGAGGTTTTGGTGGCGGTGGCGGTGGAGGTTTTGGAGGTGGAGTTGGAGGTGGATTTGGTGGGGGAGCTGGCGGTGGGTTTGGTGGTGGAGCTGGTGGCGGCGGCGGTCTAGGCGGTGGAGGTGGGTTGGGAGGTGGTGGTGGTTTGGGTGGTGGAGGAGGGCTTGGAGGAGGTGGTGGGCTTGGAGGCGGTGGTGGTTTGGGTGGTGGAGGAGGCTTAGGGCATGGCATTTATAAAAGGGGGTTTAAAAGTGGAGGGCTAGGTGGTGGCGGTGGATTGGGTGGTGGTGGAGGGCTCGGTGGAGGAGGTGGTTTAGGAGGTGGAGGAGGCATTGGGCATGGTATTTACAAAAGGGGTTTTAAGGGTGGAGGACTTGGAGGTGGAGGTGGTATTGGCGGCGGAGGAGGACTTGGAGGTGGAGGTGGTCTTGGTGGTGGCGGAGGACTTGGAGGTGGTCTTGGTGGTGGCGGAGGACTTGGAGGTGGAGGTGGTCTCGGTGGAGGTGGAGGACTTGGAGGAGGAGTTGGTAGCGGTCTTGGAGGAGGAGCTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGTGGTCTTGGAGGAGGAGCTGGTGGAGGTCTGGGAGGAGGAGCTGGTGGTGGGTTTGGTGGCGGAGGTGGTGTAGGTGCTGGAGGCGGATTTGGAGGAGGAGCAGGAAGTGGAGTTGGTATTGGTGGTGGAGGTGGCGGTGGCGGAGGGTTCGGCGGGGGTGGTGGCATTGGTGGTGGTGCCGGTTTCGGCGGTGGAGCGGGGTTTGGAGGTGGTGGCGGCCACCACTAA

Coding sequence (CDS)

ATGGCGTCTTTCTCTCTGCGTTCTGTGGCTTTTTGGGTGTGTGTGGGGATTGCCTTGGTCGGAGCCGACAATGTGGTAGAAGATGACAAGCGTTTGTTTCATCGGCCACTTGGTTTTTTGAAGGGGAGAGGGTTTCGCGGAGGCGGAGGTTTTGGTGGCGGTGGCGGTGGAGGTTTTGGAGGTGGAGTTGGAGGTGGATTTGGTGGGGGAGCTGGCGGTGGGTTTGGTGGTGGAGCTGGTGGCGGCGGCGGTCTAGGCGGTGGAGGTGGGTTGGGAGGTGGTGGTGGTTTGGGTGGTGGAGGAGGGCTTGGAGGAGGTGGTGGGCTTGGAGGCGGTGGTGGTTTGGGTGGTGGAGGAGGCTTAGGGCATGGCATTTATAAAAGGGGGTTTAAAAGTGGAGGGCTAGGTGGTGGCGGTGGATTGGGTGGTGGTGGAGGGCTCGGTGGAGGAGGTGGTTTAGGAGGTGGAGGAGGCATTGGGCATGGTATTTACAAAAGGGGTTTTAAGGGTGGAGGACTTGGAGGTGGAGGTGGTATTGGCGGCGGAGGAGGACTTGGAGGTGGAGGTGGTCTTGGTGGTGGCGGAGGACTTGGAGGTGGTCTTGGTGGTGGCGGAGGACTTGGAGGTGGAGGTGGTCTCGGTGGAGGTGGAGGACTTGGAGGAGGAGTTGGTAGCGGTCTTGGAGGAGGAGCTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGTGGTCTTGGAGGAGGAGCTGGTGGAGGTCTGGGAGGAGGAGCTGGTGGTGGGTTTGGTGGCGGAGGTGGTGTAGGTGCTGGAGGCGGATTTGGAGGAGGAGCAGGAAGTGGAGTTGGTATTGGTGGTGGAGGTGGCGGTGGCGGAGGGTTCGGCGGGGGTGGTGGCATTGGTGGTGGTGCCGGTTTCGGCGGTGGAGCGGGGTTTGGAGGTGGTGGCGGCCACCACTAA
Homology
[Close]
BLAST of CmoCh14G019370 vs. TrEMBL
Match: A0A0A0L443_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G131980 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.5e-38
Identity = 251/316 (79.43%), Postives = 258/316 (81.65%), Query Frame = 1 

Query: 1   MASFSLRSVAFWVCVGIALVGADNVVEDDKRLFHRPLGFLKGRG-FRGGGGFGG-GGGGG 60
           MA FSLR+V F  CV IALV ADN VED+K LFHRPLGF KGR  FRGGG  GG GGGGG
Sbjct: 1   MARFSLRAVVFCFCVLIALVAADNNVEDNKGLFHRPLGFYKGRKRFRGGGLGGGIGGGGG 60

Query: 61  FGGGVGGGFGGGAGGGFGGGAGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGG 120
           FGGG GGG G G GGG GGG G GGG GGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGG
Sbjct: 61  FGGGAGGGGGLGGGGGLGGGGGFGGGAGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGG 120

Query: 121 GGLGHGIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKGGGLGGGGG 180
           GGLGHGIYKRG+K GGLGGGGGLGGGGGLGGGGGLG      HGIYKRGFK GGLGGGGG
Sbjct: 121 GGLGHGIYKRGYKRGGLGGGGGLGGGGGLGGGGGLG------HGIYKRGFKRGGLGGGGG 180

Query: 181 IGGGGGLGGGGGLGGGGGLGGGLGGGGGLGGGGGLGGGGGLGGGVGSGLGGGAGGGLGGG 240
           +GGGGGLGGGGGLGG    GGGLGGGGGLGGGGGLGGGGGLGGG G G GG         
Sbjct: 181 LGGGGGLGGGGGLGG----GGGLGGGGGLGGGGGLGGGGGLGGGGGGGFGG--------- 240

Query: 241 AGGGLGGGAGGGLGGGAGGGLGGGAGGGFGGGGGVGAGGGFGGGAGSGVGIGGGGGGGGG 300
            GGGLGGG+GGGLGGG GGG GGGAGGGFGGGGG G GGGFGGG G+G G G GGG GGG
Sbjct: 241 -GGGLGGGSGGGLGGGVGGGYGGGAGGGFGGGGGAGGGGGFGGGGGAGGGGGIGGGAGGG 296

Query: 301 FGGGGGIGGGAGFGGG 315
           +GGGGG GGG GFGGG
Sbjct: 301 YGGGGGFGGGGGFGGG 296

[Close]
BLAST of CmoCh14G019370 vs. TrEMBL
Match: M4E295_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.5e-06
Identity = 149/219 (68.04%), Postives = 154/219 (70.32%), Query Frame = 1 

Query: 26  VEDDKRLFHRPLGFLKGRGFRGGGGFGGGGGGGFGGGVGGGFGGGAGGGFGGGA--GGGG 85
           V+DDK LFH+P  F   +GFR G G                     GGG GGG   GGGG
Sbjct: 28  VKDDKHLFHKPRPFFHKKGFRKGLG--------------------GGGGLGGGGGLGGGG 87

Query: 86  GLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKSGGLGGGGGLGG 145
           GLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGHG        GGLGGGGGLGG
Sbjct: 88  GLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGHG--------GGLGGGGGLGG 147

Query: 146 GGGLGGGGGLGGGGGIGHGIYKRGFKGGGLGGGGGIGGGGGLGGGGGLGGGGGLGGGLGG 205
           GGGLG GGGLGGGGG+G         GGGLGGGGG+GGGGGLGGG G G GGG GGGLGG
Sbjct: 148 GGGLGHGGGLGGGGGVG--------GGGGLGGGGGLGGGGGLGGGAGGGYGGGAGGGLGG 207

Query: 206 GGGLGGGGGLGGGGGLGGGVGSGLGGGAGGGLGGGAGGG 243
           GGG GGGGG GGGGG GGG G G G G GGG GGG GGG
Sbjct: 208 GGGAGGGGGFGGGGGYGGGGGFGGGAGGGGGFGGGYGGG 210

[Close]
BLAST of CmoCh14G019370 vs. TrEMBL
Match: M4DZ60_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.8e-06
Identity = 140/185 (75.68%), Postives = 146/185 (78.92%), Query Frame = 1 

Query: 123 HGIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKGGGLGGGGGIGGG 182
           HGIYK+GF+ G LGGGGGLGGGGGLGGGGGLGGGGG+G         GGGLGGGGG+GGG
Sbjct: 52  HGIYKKGFRKG-LGGGGGLGGGGGLGGGGGLGGGGGLG--------GGGGLGGGGGLGGG 111

Query: 183 GGLGGGGGLGGGGGL--GGGLGGGGGLGGGGGLGGGGGLGGGVGSGLGGGAGGGLGGGAG 242
           GGLG GGGLGGGGGL  GGGLGGGGGLGGGGGLGGGGGLGG          GGG+GGGAG
Sbjct: 112 GGLGHGGGLGGGGGLGHGGGLGGGGGLGGGGGLGGGGGLGG----------GGGVGGGAG 171

Query: 243 GGLGGGAGGGLGGGAGGGLGGGAGGGFGGGGGVGAGGGFGGGAGSGV--GIGGGGGGGGG 302
           GG GGGAGGGLGGG     G G GGGFGGGGG G GGGFGGGAG G   GIGGGGG GGG
Sbjct: 172 GGYGGGAGGGLGGGG----GAGGGGGFGGGGGYGGGGGFGGGAGGGFGKGIGGGGGLGGG 213

Query: 303 FGGGG 304
           +GGGG
Sbjct: 232 YGGGG 213

[Close]
BLAST of CmoCh14G019370 vs. TrEMBL
Match: A0A078DBM9_BRANA (BnaA03g15020D protein OS=Brassica napus GN=BnaA03g15020D PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.0e-05
Identity = 134/193 (69.43%), Postives = 138/193 (71.50%), Query Frame = 1 

Query: 26  VEDDKRLFHRPLGFLKGRGFRGGGGFGGGGGGGFGGGVGGGFGGGAGGGFGGGAGGGGGL 85
           V+DDK LFH+P  F   +GFR G G    GGGG GGG              GG GGGGGL
Sbjct: 28  VKDDKHLFHKPRPFFHKKGFRKGLG----GGGGLGGG--------------GGLGGGGGL 87

Query: 86  GGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKSGGLGGGGGLGGGG 145
           GGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGHG        GGLGGGGGLGGGG
Sbjct: 88  GGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGHG--------GGLGGGGGLGGGG 147

Query: 146 GL---GGGGGLGGGGGIGHGIYKRGFKGGGLGGGGGIGGGGGLGGGGGLGGGGGLGGGLG 205
           GL   GGGGGLGGG G G+G    G  GGGLGGGGG GGGGG GGGGG GGGGG GGG G
Sbjct: 148 GLGHGGGGGGLGGGAGGGYG----GGAGGGLGGGGGAGGGGGFGGGGGYGGGGGFGGGAG 190

Query: 206 GGGGLGGGGGLGG 216
           GGGG GGG G GG
Sbjct: 208 GGGGFGGGYGGGG 190

[Close]
BLAST of CmoCh14G019370 vs. NCBI nr
Match: gi|778688443|ref|XP_011652751.1| (PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis sativus])

HSP 1 Score: 168.3 bits (425), Expect = 2.2e-38
Identity = 251/316 (79.43%), Postives = 258/316 (81.65%), Query Frame = 1 

Query: 1   MASFSLRSVAFWVCVGIALVGADNVVEDDKRLFHRPLGFLKGRG-FRGGGGFGG-GGGGG 60
           MA FSLR+V F  CV IALV ADN VED+K LFHRPLGF KGR  FRGGG  GG GGGGG
Sbjct: 1   MARFSLRAVVFCFCVLIALVAADNNVEDNKGLFHRPLGFYKGRKRFRGGGLGGGIGGGGG 60

Query: 61  FGGGVGGGFGGGAGGGFGGGAGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGG 120
           FGGG GGG G G GGG GGG G GGG GGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGG
Sbjct: 61  FGGGAGGGGGLGGGGGLGGGGGFGGGAGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGG 120

Query: 121 GGLGHGIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKGGGLGGGGG 180
           GGLGHGIYKRG+K GGLGGGGGLGGGGGLGGGGGLG      HGIYKRGFK GGLGGGGG
Sbjct: 121 GGLGHGIYKRGYKRGGLGGGGGLGGGGGLGGGGGLG------HGIYKRGFKRGGLGGGGG 180

Query: 181 IGGGGGLGGGGGLGGGGGLGGGLGGGGGLGGGGGLGGGGGLGGGVGSGLGGGAGGGLGGG 240
           +GGGGGLGGGGGLGG    GGGLGGGGGLGGGGGLGGGGGLGGG G G GG         
Sbjct: 181 LGGGGGLGGGGGLGG----GGGLGGGGGLGGGGGLGGGGGLGGGGGGGFGG--------- 240

Query: 241 AGGGLGGGAGGGLGGGAGGGLGGGAGGGFGGGGGVGAGGGFGGGAGSGVGIGGGGGGGGG 300
            GGGLGGG+GGGLGGG GGG GGGAGGGFGGGGG G GGGFGGG G+G G G GGG GGG
Sbjct: 241 -GGGLGGGSGGGLGGGVGGGYGGGAGGGFGGGGGAGGGGGFGGGGGAGGGGGIGGGAGGG 296

Query: 301 FGGGGGIGGGAGFGGG 315
           +GGGGG GGG GFGGG
Sbjct: 301 YGGGGGFGGGGGFGGG 296

[Close]
BLAST of CmoCh14G019370 vs. NCBI nr
Match: gi|659077739|ref|XP_008439359.1| (PREDICTED: glycine-rich cell wall structural protein-like [Cucumis melo])

HSP 1 Score: 125.9 bits (315), Expect = 1.2e-25
Identity = 174/224 (77.68%), Postives = 181/224 (80.80%), Query Frame = 1 

Query: 1   MASFSLRSVAFWVCVGIALVGADNVVEDDKRLFHRPLGFLKGRG-FRGGGGFGG-GGGGG 60
           MA FSLR+V F  CV IA VGADN VED+K LFHRPLGF+KGR  FRGGG  GG GGGGG
Sbjct: 1   MACFSLRAVVFCFCVLIAFVGADNNVEDNKGLFHRPLGFIKGRKRFRGGGLGGGIGGGGG 60

Query: 61  FGGGVGGGFGGGAGGGFGGGAGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGG 120
           FGGG GGGFGGGAGGGF          GGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGG
Sbjct: 61  FGGGAGGGFGGGAGGGF----------GGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGG 120

Query: 121 GGLGHGIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKGGGLGGGGG 180
           GGLGHGI+KRG+K GGLGGGGGLGGGGGLGGGGGLGG GG G+G    G  GGG GGGGG
Sbjct: 121 GGLGHGIHKRGYKRGGLGGGGGLGGGGGLGGGGGLGGVGG-GYG----GGAGGGFGGGGG 180

Query: 181 IGGGGGLGGGGGLGGGGGLGGGLGGGGGLGGGGGLGGGGGLGGG 223
            GGGGG GGGGG GGGGG+GG  G GGG GGGGG GGGGG GGG
Sbjct: 181 AGGGGGFGGGGGAGGGGGIGG--GAGGGFGGGGGFGGGGGYGGG 207

[Close]
BLAST of CmoCh14G019370 vs. NCBI nr
Match: gi|923568584|ref|XP_013739004.1| (PREDICTED: glycine-rich cell wall structural protein 1 [Brassica napus])

HSP 1 Score: 75.5 bits (184), Expect = 1.9e-10
Identity = 165/241 (68.46%), Postives = 170/241 (70.54%), Query Frame = 1 

Query: 26  VEDDKRLFHRPLGFLKGRGFRGGGGFGGGGGGGFGGGVGGGFGGGAGGGFGGGAGGGGGL 85
           V+DDK LFH+P  F   +GFR G                               GGGGGL
Sbjct: 28  VKDDKHLFHKPRPFFHKKGFRKG------------------------------LGGGGGL 87

Query: 86  GGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKSGGLGGGGGLGGGG 145
           GGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLG G        GGLGGGGGLG GG
Sbjct: 88  GGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGG--------GGLGGGGGLGHGG 147

Query: 146 GLGGGGGLGGGGGIGHGIYKRGFKGGGLGGGGGIGGGGGLGGGGGLGGGGGLGGGLGGGG 205
           GLGGGGGLGGGGG+GH        GGGLGGGGG+GGGGGLG GGGLGG    GGGLGGGG
Sbjct: 148 GLGGGGGLGGGGGLGH--------GGGLGGGGGLGGGGGLGHGGGLGG----GGGLGGGG 207

Query: 206 GLGGGGGLGGGGGLGGGVGSGLGGGAGGGLGGGAGGGLGGGAGGGLGGGAGGGLGGGAGG 265
           GLGGGGGLGGGGGLGGG G G GGGAGGGLGGG G G GGG GGG G G GGGLGGGAGG
Sbjct: 208 GLGGGGGLGGGGGLGGGAGGGYGGGAGGGLGGGGGAGGGGGFGGGGGYGGGGGLGGGAGG 218

Query: 266 G 267
           G
Sbjct: 268 G 218

[Close]
BLAST of CmoCh14G019370 vs. NCBI nr
Match: gi|729445498|ref|XP_010522420.1| (PREDICTED: glycine-rich cell wall structural protein 1 isoform X2 [Tarenaya hassleriana])

HSP 1 Score: 70.5 bits (171), Expect = 6.2e-09
Identity = 162/207 (78.26%), Postives = 169/207 (81.64%), Query Frame = 1 

Query: 124 GIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKGGGLGGGGGIGGGG 183
           GIYK+GF+ G LGGGGGLGGGGGLGGGGGLGGGGG+G         GGGLGGGGG+GGGG
Sbjct: 46  GIYKKGFRKG-LGGGGGLGGGGGLGGGGGLGGGGGLGG--------GGGLGGGGGLGGGG 105

Query: 184 GLGGGGGLGGGGGLGGGLGGGGGLGGGGGLGGGGGLGGGVGSGL--GGGAGGGLGGGAGG 243
           GLGGGGGLGGGGGLGGG G GGG GGG   GGGGGLGGG G G   GGGAGGG+GGGAGG
Sbjct: 106 GLGGGGGLGGGGGLGGGGGAGGGFGGGA--GGGGGLGGGAGGGFGGGGGAGGGVGGGAGG 165

Query: 244 GLGGGAGGGLGGGAGGGLGGGAGGGFGGGGGVGAGGGFGGGAGSGVGIGGGGGGGGGFGG 303
           G GGGAGGGLGGG G G GGG GGG GGG G GAGGGFGGGAG G+G GGG GGGGGFGG
Sbjct: 166 GFGGGAGGGLGGGGGVGGGGGFGGGAGGGVGGGAGGGFGGGAGGGLGGGGGVGGGGGFGG 225

Query: 304 GGGIGGGAGFGGGAGFGG----GGGHH 325
           GGG+GGGAGFGGG GFGG    GGGHH
Sbjct: 226 GGGVGGGAGFGGGGGFGGGGGFGGGHH 241

[Close]
BLAST of CmoCh14G019370 vs. NCBI nr
Match: gi|747088224|ref|XP_011091689.1| (PREDICTED: glycine-rich cell wall structural protein-like [Sesamum indicum])

HSP 1 Score: 69.3 bits (168), Expect = 1.4e-08
Identity = 160/219 (73.06%), Postives = 165/219 (75.34%), Query Frame = 1 

Query: 114 GLGGGGGLGHGIYKRGFK-----SGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGF 173
           G G GGGLG GIY++GFK      GGLGGGGGLGGGGGLGGGGGLGGGGG+GH       
Sbjct: 47  GKGVGGGLGRGIYRKGFKHRFGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGH------- 106

Query: 174 KGGGLGG--GGGIGGGGGLGGGGGLGGGGGLGGGLGGGGGLGGGGGLGGGGGLGGGVGSG 233
            GGGLGG  GGG+GGGGGLGGGGGLGGGGGLGGG GGGGGLGG    G GGGLGGG G G
Sbjct: 107 -GGGLGGGAGGGLGGGGGLGGGGGLGGGGGLGGGAGGGGGLGG----GAGGGLGGGAGGG 166

Query: 234 LGGGAGGGLGGGAGGGLGGGAGGGLGGGAGGGLGGGAGGGFGGGGGVGAGGGFGGGAGSG 293
            GGGAGGGLGGGAGG      GGG GGGAGGGLGGGAGGGFGGGGG+G GGG        
Sbjct: 167 FGGGAGGGLGGGAGG------GGGFGGGAGGGLGGGAGGGFGGGGGLGGGGGL------- 226

Query: 294 VGIGGGGGGGGGFGGGGGIGGGA--GFGGGAGFGGGGGH 324
                GGGGGGGFGGGGG GGGA  GFGGG G GGGGGH
Sbjct: 227 -----GGGGGGGFGGGGGHGGGAGGGFGGGGGIGGGGGH 235

The following BLAST results are available for this feature:
BLAST of CmoCh14G019370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh14G019370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L443_CUCSA1.5e-3879.43Uncharacterized protein OS=Cucumis sativus GN=Csa_3G131980 PE=4 SV=1[more]
M4E295_BRARP1.5e-0668.04Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
M4DZ60_BRARP5.8e-0675.68Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
A0A078DBM9_BRANA1.0e-0569.43BnaA03g15020D protein OS=Brassica napus GN=BnaA03g15020D PE=4 SV=1[more]
BLAST of CmoCh14G019370 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmoCh14G019370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778688443|ref|XP_011652751.1|2.2e-3879.43PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis sativus][more]
gi|659077739|ref|XP_008439359.1|1.2e-2577.68PREDICTED: glycine-rich cell wall structural protein-like [Cucumis melo][more]
gi|923568584|ref|XP_013739004.1|1.9e-1068.46PREDICTED: glycine-rich cell wall structural protein 1 [Brassica napus][more]
gi|729445498|ref|XP_010522420.1|6.2e-0978.26PREDICTED: glycine-rich cell wall structural protein 1 isoform X2 [Tarenaya hass... [more]
gi|747088224|ref|XP_011091689.1|1.4e-0873.06PREDICTED: glycine-rich cell wall structural protein-like [Sesamum indicum][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G019370.1CmoCh14G019370.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh14G019370CmaCh14G018870Cucurbita maxima (Rimu)cmacmoB245
CmoCh14G019370Cla021427Watermelon (97103) v1cmowmB231
CmoCh14G019370MELO3C006319Melon (DHL92) v3.5.1cmomeB230
CmoCh14G019370Cp4.1LG03g18450Cucurbita pepo (Zucchini)cmocpeB245
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh14G019370Cucumber (Chinese Long) v3cmocucB0266
CmoCh14G019370Cucumber (Chinese Long) v3cmocucB0279
CmoCh14G019370Cucumber (Chinese Long) v3cmocucB0283
CmoCh14G019370Watermelon (97103) v2cmowmbB243
CmoCh14G019370Watermelon (97103) v2cmowmbB246
CmoCh14G019370Watermelon (97103) v2cmowmbB253
CmoCh14G019370Wax gourdcmowgoB0299
CmoCh14G019370Wax gourdcmowgoB0318
CmoCh14G019370Wax gourdcmowgoB0333
CmoCh14G019370Cucurbita moschata (Rifu)cmocmoB198
CmoCh14G019370Cucurbita moschata (Rifu)cmocmoB208
CmoCh14G019370Cucurbita moschata (Rifu)cmocmoB213
CmoCh14G019370Cucurbita moschata (Rifu)cmocmoB224
CmoCh14G019370Cucurbita moschata (Rifu)cmocmoB233
CmoCh14G019370Cucumber (Gy14) v1cgycmoB0700
CmoCh14G019370Cucurbita maxima (Rimu)cmacmoB350
CmoCh14G019370Cucurbita maxima (Rimu)cmacmoB501
CmoCh14G019370Cucurbita maxima (Rimu)cmacmoB797
CmoCh14G019370Cucurbita maxima (Rimu)cmacmoB883
CmoCh14G019370Wild cucumber (PI 183967)cmocpiB227
CmoCh14G019370Wild cucumber (PI 183967)cmocpiB239
CmoCh14G019370Wild cucumber (PI 183967)cmocpiB243
CmoCh14G019370Cucumber (Chinese Long) v2cmocuB224
CmoCh14G019370Cucumber (Chinese Long) v2cmocuB239
CmoCh14G019370Cucumber (Chinese Long) v2cmocuB236
CmoCh14G019370Melon (DHL92) v3.5.1cmomeB221
CmoCh14G019370Watermelon (Charleston Gray)cmowcgB219
CmoCh14G019370Watermelon (Charleston Gray)cmowcgB221
CmoCh14G019370Watermelon (Charleston Gray)cmowcgB227
CmoCh14G019370Watermelon (97103) v1cmowmB239
CmoCh14G019370Cucurbita pepo (Zucchini)cmocpeB223
CmoCh14G019370Cucurbita pepo (Zucchini)cmocpeB254
CmoCh14G019370Bottle gourd (USVL1VR-Ls)cmolsiB213
CmoCh14G019370Bottle gourd (USVL1VR-Ls)cmolsiB233
CmoCh14G019370Bottle gourd (USVL1VR-Ls)cmolsiB235
CmoCh14G019370Cucumber (Gy14) v2cgybcmoB180
CmoCh14G019370Cucumber (Gy14) v2cgybcmoB288
CmoCh14G019370Cucumber (Gy14) v2cgybcmoB290
CmoCh14G019370Melon (DHL92) v3.6.1cmomedB250
CmoCh14G019370Melon (DHL92) v3.6.1cmomedB260
CmoCh14G019370Silver-seed gourdcarcmoB0243
CmoCh14G019370Silver-seed gourdcarcmoB0319
CmoCh14G019370Silver-seed gourdcarcmoB1049
CmoCh14G019370Silver-seed gourdcarcmoB1284
CmoCh14G019370Silver-seed gourdcarcmoB1443