CmoCh14G019370.1 (mRNA) Cucurbita moschata (Rifu)

Overview
NameCmoCh14G019370.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr14 : 14345750 .. 14346724 (-)
Sequence length975
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCTTTCTCTCTGCGTTCTGTGGCTTTTTGGGTGTGTGTGGGGATTGCCTTGGTCGGAGCCGACAATGTGGTAGAAGATGACAAGCGTTTGTTTCATCGGCCACTTGGTTTTTTGAAGGGGAGAGGGTTTCGCGGAGGCGGAGGTTTTGGTGGCGGTGGCGGTGGAGGTTTTGGAGGTGGAGTTGGAGGTGGATTTGGTGGGGGAGCTGGCGGTGGGTTTGGTGGTGGAGCTGGTGGCGGCGGCGGTCTAGGCGGTGGAGGTGGGTTGGGAGGTGGTGGTGGTTTGGGTGGTGGAGGAGGGCTTGGAGGAGGTGGTGGGCTTGGAGGCGGTGGTGGTTTGGGTGGTGGAGGAGGCTTAGGGCATGGCATTTATAAAAGGGGGTTTAAAAGTGGAGGGCTAGGTGGTGGCGGTGGATTGGGTGGTGGTGGAGGGCTCGGTGGAGGAGGTGGTTTAGGAGGTGGAGGAGGCATTGGGCATGGTATTTACAAAAGGGGTTTTAAGGGTGGAGGACTTGGAGGTGGAGGTGGTATTGGCGGCGGAGGAGGACTTGGAGGTGGAGGTGGTCTTGGTGGTGGCGGAGGACTTGGAGGTGGTCTTGGTGGTGGCGGAGGACTTGGAGGTGGAGGTGGTCTCGGTGGAGGTGGAGGACTTGGAGGAGGAGTTGGTAGCGGTCTTGGAGGAGGAGCTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGTGGTCTTGGAGGAGGAGCTGGTGGAGGTCTGGGAGGAGGAGCTGGTGGTGGGTTTGGTGGCGGAGGTGGTGTAGGTGCTGGAGGCGGATTTGGAGGAGGAGCAGGAAGTGGAGTTGGTATTGGTGGTGGAGGTGGCGGTGGCGGAGGGTTCGGCGGGGGTGGTGGCATTGGTGGTGGTGCCGGTTTCGGCGGTGGAGCGGGGTTTGGAGGTGGTGGCGGCCACCACTAA

mRNA sequence

ATGGCGTCTTTCTCTCTGCGTTCTGTGGCTTTTTGGGTGTGTGTGGGGATTGCCTTGGTCGGAGCCGACAATGTGGTAGAAGATGACAAGCGTTTGTTTCATCGGCCACTTGGTTTTTTGAAGGGGAGAGGGTTTCGCGGAGGCGGAGGTTTTGGTGGCGGTGGCGGTGGAGGTTTTGGAGGTGGAGTTGGAGGTGGATTTGGTGGGGGAGCTGGCGGTGGGTTTGGTGGTGGAGCTGGTGGCGGCGGCGGTCTAGGCGGTGGAGGTGGGTTGGGAGGTGGTGGTGGTTTGGGTGGTGGAGGAGGGCTTGGAGGAGGTGGTGGGCTTGGAGGCGGTGGTGGTTTGGGTGGTGGAGGAGGCTTAGGGCATGGCATTTATAAAAGGGGGTTTAAAAGTGGAGGGCTAGGTGGTGGCGGTGGATTGGGTGGTGGTGGAGGGCTCGGTGGAGGAGGTGGTTTAGGAGGTGGAGGAGGCATTGGGCATGGTATTTACAAAAGGGGTTTTAAGGGTGGAGGACTTGGAGGTGGAGGTGGTATTGGCGGCGGAGGAGGACTTGGAGGTGGAGGTGGTCTTGGTGGTGGCGGAGGACTTGGAGGTGGTCTTGGTGGTGGCGGAGGACTTGGAGGTGGAGGTGGTCTCGGTGGAGGTGGAGGACTTGGAGGAGGAGTTGGTAGCGGTCTTGGAGGAGGAGCTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGTGGTCTTGGAGGAGGAGCTGGTGGAGGTCTGGGAGGAGGAGCTGGTGGTGGGTTTGGTGGCGGAGGTGGTGTAGGTGCTGGAGGCGGATTTGGAGGAGGAGCAGGAAGTGGAGTTGGTATTGGTGGTGGAGGTGGCGGTGGCGGAGGGTTCGGCGGGGGTGGTGGCATTGGTGGTGGTGCCGGTTTCGGCGGTGGAGCGGGGTTTGGAGGTGGTGGCGGCCACCACTAA

Coding sequence (CDS)

ATGGCGTCTTTCTCTCTGCGTTCTGTGGCTTTTTGGGTGTGTGTGGGGATTGCCTTGGTCGGAGCCGACAATGTGGTAGAAGATGACAAGCGTTTGTTTCATCGGCCACTTGGTTTTTTGAAGGGGAGAGGGTTTCGCGGAGGCGGAGGTTTTGGTGGCGGTGGCGGTGGAGGTTTTGGAGGTGGAGTTGGAGGTGGATTTGGTGGGGGAGCTGGCGGTGGGTTTGGTGGTGGAGCTGGTGGCGGCGGCGGTCTAGGCGGTGGAGGTGGGTTGGGAGGTGGTGGTGGTTTGGGTGGTGGAGGAGGGCTTGGAGGAGGTGGTGGGCTTGGAGGCGGTGGTGGTTTGGGTGGTGGAGGAGGCTTAGGGCATGGCATTTATAAAAGGGGGTTTAAAAGTGGAGGGCTAGGTGGTGGCGGTGGATTGGGTGGTGGTGGAGGGCTCGGTGGAGGAGGTGGTTTAGGAGGTGGAGGAGGCATTGGGCATGGTATTTACAAAAGGGGTTTTAAGGGTGGAGGACTTGGAGGTGGAGGTGGTATTGGCGGCGGAGGAGGACTTGGAGGTGGAGGTGGTCTTGGTGGTGGCGGAGGACTTGGAGGTGGTCTTGGTGGTGGCGGAGGACTTGGAGGTGGAGGTGGTCTCGGTGGAGGTGGAGGACTTGGAGGAGGAGTTGGTAGCGGTCTTGGAGGAGGAGCTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGCGGTCTTGGAGGAGGAGCTGGTGGTGGTCTTGGAGGAGGAGCTGGTGGAGGTCTGGGAGGAGGAGCTGGTGGTGGGTTTGGTGGCGGAGGTGGTGTAGGTGCTGGAGGCGGATTTGGAGGAGGAGCAGGAAGTGGAGTTGGTATTGGTGGTGGAGGTGGCGGTGGCGGAGGGTTCGGCGGGGGTGGTGGCATTGGTGGTGGTGCCGGTTTCGGCGGTGGAGCGGGGTTTGGAGGTGGTGGCGGCCACCACTAA
Homology
[Close]
BLAST of CmoCh14G019370.1 vs. TrEMBL
Match: A0A0A0L443_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G131980 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.5e-38
Identity = 251/316 (79.43%), Postives = 258/316 (81.65%), Query Frame = 1 

Query: 1   MASFSLRSVAFWVCVGIALVGADNVVEDDKRLFHRPLGFLKGRG-FRGGGGFGG-GGGGG 60
           MA FSLR+V F  CV IALV ADN VED+K LFHRPLGF KGR  FRGGG  GG GGGGG
Sbjct: 1   MARFSLRAVVFCFCVLIALVAADNNVEDNKGLFHRPLGFYKGRKRFRGGGLGGGIGGGGG 60

Query: 61  FGGGVGGGFGGGAGGGFGGGAGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGG 120
           FGGG GGG G G GGG GGG G GGG GGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGG
Sbjct: 61  FGGGAGGGGGLGGGGGLGGGGGFGGGAGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGG 120

Query: 121 GGLGHGIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKGGGLGGGGG 180
           GGLGHGIYKRG+K GGLGGGGGLGGGGGLGGGGGLG      HGIYKRGFK GGLGGGGG
Sbjct: 121 GGLGHGIYKRGYKRGGLGGGGGLGGGGGLGGGGGLG------HGIYKRGFKRGGLGGGGG 180

Query: 181 IGGGGGLGGGGGLGGGGGLGGGLGGGGGLGGGGGLGGGGGLGGGVGSGLGGGAGGGLGGG 240
           +GGGGGLGGGGGLGG    GGGLGGGGGLGGGGGLGGGGGLGGG G G GG         
Sbjct: 181 LGGGGGLGGGGGLGG----GGGLGGGGGLGGGGGLGGGGGLGGGGGGGFGG--------- 240

Query: 241 AGGGLGGGAGGGLGGGAGGGLGGGAGGGFGGGGGVGAGGGFGGGAGSGVGIGGGGGGGGG 300
            GGGLGGG+GGGLGGG GGG GGGAGGGFGGGGG G GGGFGGG G+G G G GGG GGG
Sbjct: 241 -GGGLGGGSGGGLGGGVGGGYGGGAGGGFGGGGGAGGGGGFGGGGGAGGGGGIGGGAGGG 296

Query: 301 FGGGGGIGGGAGFGGG 315
           +GGGGG GGG GFGGG
Sbjct: 301 YGGGGGFGGGGGFGGG 296

[Close]
BLAST of CmoCh14G019370.1 vs. TrEMBL
Match: M4E295_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.5e-06
Identity = 149/219 (68.04%), Postives = 154/219 (70.32%), Query Frame = 1 

Query: 26  VEDDKRLFHRPLGFLKGRGFRGGGGFGGGGGGGFGGGVGGGFGGGAGGGFGGGA--GGGG 85
           V+DDK LFH+P  F   +GFR G G                     GGG GGG   GGGG
Sbjct: 28  VKDDKHLFHKPRPFFHKKGFRKGLG--------------------GGGGLGGGGGLGGGG 87

Query: 86  GLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKSGGLGGGGGLGG 145
           GLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGHG        GGLGGGGGLGG
Sbjct: 88  GLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGHG--------GGLGGGGGLGG 147

Query: 146 GGGLGGGGGLGGGGGIGHGIYKRGFKGGGLGGGGGIGGGGGLGGGGGLGGGGGLGGGLGG 205
           GGGLG GGGLGGGGG+G         GGGLGGGGG+GGGGGLGGG G G GGG GGGLGG
Sbjct: 148 GGGLGHGGGLGGGGGVG--------GGGGLGGGGGLGGGGGLGGGAGGGYGGGAGGGLGG 207

Query: 206 GGGLGGGGGLGGGGGLGGGVGSGLGGGAGGGLGGGAGGG 243
           GGG GGGGG GGGGG GGG G G G G GGG GGG GGG
Sbjct: 208 GGGAGGGGGFGGGGGYGGGGGFGGGAGGGGGFGGGYGGG 210

[Close]
BLAST of CmoCh14G019370.1 vs. TrEMBL
Match: M4DZ60_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.8e-06
Identity = 140/185 (75.68%), Postives = 146/185 (78.92%), Query Frame = 1 

Query: 123 HGIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKGGGLGGGGGIGGG 182
           HGIYK+GF+ G LGGGGGLGGGGGLGGGGGLGGGGG+G         GGGLGGGGG+GGG
Sbjct: 52  HGIYKKGFRKG-LGGGGGLGGGGGLGGGGGLGGGGGLG--------GGGGLGGGGGLGGG 111

Query: 183 GGLGGGGGLGGGGGL--GGGLGGGGGLGGGGGLGGGGGLGGGVGSGLGGGAGGGLGGGAG 242
           GGLG GGGLGGGGGL  GGGLGGGGGLGGGGGLGGGGGLGG          GGG+GGGAG
Sbjct: 112 GGLGHGGGLGGGGGLGHGGGLGGGGGLGGGGGLGGGGGLGG----------GGGVGGGAG 171

Query: 243 GGLGGGAGGGLGGGAGGGLGGGAGGGFGGGGGVGAGGGFGGGAGSGV--GIGGGGGGGGG 302
           GG GGGAGGGLGGG     G G GGGFGGGGG G GGGFGGGAG G   GIGGGGG GGG
Sbjct: 172 GGYGGGAGGGLGGGG----GAGGGGGFGGGGGYGGGGGFGGGAGGGFGKGIGGGGGLGGG 213

Query: 303 FGGGG 304
           +GGGG
Sbjct: 232 YGGGG 213

[Close]
BLAST of CmoCh14G019370.1 vs. TrEMBL
Match: A0A078DBM9_BRANA (BnaA03g15020D protein OS=Brassica napus GN=BnaA03g15020D PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.0e-05
Identity = 134/193 (69.43%), Postives = 138/193 (71.50%), Query Frame = 1 

Query: 26  VEDDKRLFHRPLGFLKGRGFRGGGGFGGGGGGGFGGGVGGGFGGGAGGGFGGGAGGGGGL 85
           V+DDK LFH+P  F   +GFR G G    GGGG GGG              GG GGGGGL
Sbjct: 28  VKDDKHLFHKPRPFFHKKGFRKGLG----GGGGLGGG--------------GGLGGGGGL 87

Query: 86  GGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKSGGLGGGGGLGGGG 145
           GGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGHG        GGLGGGGGLGGGG
Sbjct: 88  GGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGHG--------GGLGGGGGLGGGG 147

Query: 146 GL---GGGGGLGGGGGIGHGIYKRGFKGGGLGGGGGIGGGGGLGGGGGLGGGGGLGGGLG 205
           GL   GGGGGLGGG G G+G    G  GGGLGGGGG GGGGG GGGGG GGGGG GGG G
Sbjct: 148 GLGHGGGGGGLGGGAGGGYG----GGAGGGLGGGGGAGGGGGFGGGGGYGGGGGFGGGAG 190

Query: 206 GGGGLGGGGGLGG 216
           GGGG GGG G GG
Sbjct: 208 GGGGFGGGYGGGG 190

[Close]
BLAST of CmoCh14G019370.1 vs. NCBI nr
Match: gi|778688443|ref|XP_011652751.1| (PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis sativus])

HSP 1 Score: 168.3 bits (425), Expect = 2.2e-38
Identity = 251/316 (79.43%), Postives = 258/316 (81.65%), Query Frame = 1 

Query: 1   MASFSLRSVAFWVCVGIALVGADNVVEDDKRLFHRPLGFLKGRG-FRGGGGFGG-GGGGG 60
           MA FSLR+V F  CV IALV ADN VED+K LFHRPLGF KGR  FRGGG  GG GGGGG
Sbjct: 1   MARFSLRAVVFCFCVLIALVAADNNVEDNKGLFHRPLGFYKGRKRFRGGGLGGGIGGGGG 60

Query: 61  FGGGVGGGFGGGAGGGFGGGAGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGG 120
           FGGG GGG G G GGG GGG G GGG GGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGG
Sbjct: 61  FGGGAGGGGGLGGGGGLGGGGGFGGGAGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGG 120

Query: 121 GGLGHGIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKGGGLGGGGG 180
           GGLGHGIYKRG+K GGLGGGGGLGGGGGLGGGGGLG      HGIYKRGFK GGLGGGGG
Sbjct: 121 GGLGHGIYKRGYKRGGLGGGGGLGGGGGLGGGGGLG------HGIYKRGFKRGGLGGGGG 180

Query: 181 IGGGGGLGGGGGLGGGGGLGGGLGGGGGLGGGGGLGGGGGLGGGVGSGLGGGAGGGLGGG 240
           +GGGGGLGGGGGLGG    GGGLGGGGGLGGGGGLGGGGGLGGG G G GG         
Sbjct: 181 LGGGGGLGGGGGLGG----GGGLGGGGGLGGGGGLGGGGGLGGGGGGGFGG--------- 240

Query: 241 AGGGLGGGAGGGLGGGAGGGLGGGAGGGFGGGGGVGAGGGFGGGAGSGVGIGGGGGGGGG 300
            GGGLGGG+GGGLGGG GGG GGGAGGGFGGGGG G GGGFGGG G+G G G GGG GGG
Sbjct: 241 -GGGLGGGSGGGLGGGVGGGYGGGAGGGFGGGGGAGGGGGFGGGGGAGGGGGIGGGAGGG 296

Query: 301 FGGGGGIGGGAGFGGG 315
           +GGGGG GGG GFGGG
Sbjct: 301 YGGGGGFGGGGGFGGG 296

[Close]
BLAST of CmoCh14G019370.1 vs. NCBI nr
Match: gi|659077739|ref|XP_008439359.1| (PREDICTED: glycine-rich cell wall structural protein-like [Cucumis melo])

HSP 1 Score: 125.9 bits (315), Expect = 1.2e-25
Identity = 174/224 (77.68%), Postives = 181/224 (80.80%), Query Frame = 1 

Query: 1   MASFSLRSVAFWVCVGIALVGADNVVEDDKRLFHRPLGFLKGRG-FRGGGGFGG-GGGGG 60
           MA FSLR+V F  CV IA VGADN VED+K LFHRPLGF+KGR  FRGGG  GG GGGGG
Sbjct: 1   MACFSLRAVVFCFCVLIAFVGADNNVEDNKGLFHRPLGFIKGRKRFRGGGLGGGIGGGGG 60

Query: 61  FGGGVGGGFGGGAGGGFGGGAGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGG 120
           FGGG GGGFGGGAGGGF          GGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGG
Sbjct: 61  FGGGAGGGFGGGAGGGF----------GGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGG 120

Query: 121 GGLGHGIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKGGGLGGGGG 180
           GGLGHGI+KRG+K GGLGGGGGLGGGGGLGGGGGLGG GG G+G    G  GGG GGGGG
Sbjct: 121 GGLGHGIHKRGYKRGGLGGGGGLGGGGGLGGGGGLGGVGG-GYG----GGAGGGFGGGGG 180

Query: 181 IGGGGGLGGGGGLGGGGGLGGGLGGGGGLGGGGGLGGGGGLGGG 223
            GGGGG GGGGG GGGGG+GG  G GGG GGGGG GGGGG GGG
Sbjct: 181 AGGGGGFGGGGGAGGGGGIGG--GAGGGFGGGGGFGGGGGYGGG 207

[Close]
BLAST of CmoCh14G019370.1 vs. NCBI nr
Match: gi|923568584|ref|XP_013739004.1| (PREDICTED: glycine-rich cell wall structural protein 1 [Brassica napus])

HSP 1 Score: 75.5 bits (184), Expect = 1.9e-10
Identity = 165/241 (68.46%), Postives = 170/241 (70.54%), Query Frame = 1 

Query: 26  VEDDKRLFHRPLGFLKGRGFRGGGGFGGGGGGGFGGGVGGGFGGGAGGGFGGGAGGGGGL 85
           V+DDK LFH+P  F   +GFR G                               GGGGGL
Sbjct: 28  VKDDKHLFHKPRPFFHKKGFRKG------------------------------LGGGGGL 87

Query: 86  GGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKSGGLGGGGGLGGGG 145
           GGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLG G        GGLGGGGGLG GG
Sbjct: 88  GGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGG--------GGLGGGGGLGHGG 147

Query: 146 GLGGGGGLGGGGGIGHGIYKRGFKGGGLGGGGGIGGGGGLGGGGGLGGGGGLGGGLGGGG 205
           GLGGGGGLGGGGG+GH        GGGLGGGGG+GGGGGLG GGGLGG    GGGLGGGG
Sbjct: 148 GLGGGGGLGGGGGLGH--------GGGLGGGGGLGGGGGLGHGGGLGG----GGGLGGGG 207

Query: 206 GLGGGGGLGGGGGLGGGVGSGLGGGAGGGLGGGAGGGLGGGAGGGLGGGAGGGLGGGAGG 265
           GLGGGGGLGGGGGLGGG G G GGGAGGGLGGG G G GGG GGG G G GGGLGGGAGG
Sbjct: 208 GLGGGGGLGGGGGLGGGAGGGYGGGAGGGLGGGGGAGGGGGFGGGGGYGGGGGLGGGAGG 218

Query: 266 G 267
           G
Sbjct: 268 G 218

[Close]
BLAST of CmoCh14G019370.1 vs. NCBI nr
Match: gi|729445498|ref|XP_010522420.1| (PREDICTED: glycine-rich cell wall structural protein 1 isoform X2 [Tarenaya hassleriana])

HSP 1 Score: 70.5 bits (171), Expect = 6.2e-09
Identity = 162/207 (78.26%), Postives = 169/207 (81.64%), Query Frame = 1 

Query: 124 GIYKRGFKSGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKGGGLGGGGGIGGGG 183
           GIYK+GF+ G LGGGGGLGGGGGLGGGGGLGGGGG+G         GGGLGGGGG+GGGG
Sbjct: 46  GIYKKGFRKG-LGGGGGLGGGGGLGGGGGLGGGGGLGG--------GGGLGGGGGLGGGG 105

Query: 184 GLGGGGGLGGGGGLGGGLGGGGGLGGGGGLGGGGGLGGGVGSGL--GGGAGGGLGGGAGG 243
           GLGGGGGLGGGGGLGGG G GGG GGG   GGGGGLGGG G G   GGGAGGG+GGGAGG
Sbjct: 106 GLGGGGGLGGGGGLGGGGGAGGGFGGGA--GGGGGLGGGAGGGFGGGGGAGGGVGGGAGG 165

Query: 244 GLGGGAGGGLGGGAGGGLGGGAGGGFGGGGGVGAGGGFGGGAGSGVGIGGGGGGGGGFGG 303
           G GGGAGGGLGGG G G GGG GGG GGG G GAGGGFGGGAG G+G GGG GGGGGFGG
Sbjct: 166 GFGGGAGGGLGGGGGVGGGGGFGGGAGGGVGGGAGGGFGGGAGGGLGGGGGVGGGGGFGG 225

Query: 304 GGGIGGGAGFGGGAGFGG----GGGHH 325
           GGG+GGGAGFGGG GFGG    GGGHH
Sbjct: 226 GGGVGGGAGFGGGGGFGGGGGFGGGHH 241

[Close]
BLAST of CmoCh14G019370.1 vs. NCBI nr
Match: gi|747088224|ref|XP_011091689.1| (PREDICTED: glycine-rich cell wall structural protein-like [Sesamum indicum])

HSP 1 Score: 69.3 bits (168), Expect = 1.4e-08
Identity = 160/219 (73.06%), Postives = 165/219 (75.34%), Query Frame = 1 

Query: 114 GLGGGGGLGHGIYKRGFK-----SGGLGGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGF 173
           G G GGGLG GIY++GFK      GGLGGGGGLGGGGGLGGGGGLGGGGG+GH       
Sbjct: 47  GKGVGGGLGRGIYRKGFKHRFGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGH------- 106

Query: 174 KGGGLGG--GGGIGGGGGLGGGGGLGGGGGLGGGLGGGGGLGGGGGLGGGGGLGGGVGSG 233
            GGGLGG  GGG+GGGGGLGGGGGLGGGGGLGGG GGGGGLGG    G GGGLGGG G G
Sbjct: 107 -GGGLGGGAGGGLGGGGGLGGGGGLGGGGGLGGGAGGGGGLGG----GAGGGLGGGAGGG 166

Query: 234 LGGGAGGGLGGGAGGGLGGGAGGGLGGGAGGGLGGGAGGGFGGGGGVGAGGGFGGGAGSG 293
            GGGAGGGLGGGAGG      GGG GGGAGGGLGGGAGGGFGGGGG+G GGG        
Sbjct: 167 FGGGAGGGLGGGAGG------GGGFGGGAGGGLGGGAGGGFGGGGGLGGGGGL------- 226

Query: 294 VGIGGGGGGGGGFGGGGGIGGGA--GFGGGAGFGGGGGH 324
                GGGGGGGFGGGGG GGGA  GFGGG G GGGGGH
Sbjct: 227 -----GGGGGGGFGGGGGHGGGAGGGFGGGGGIGGGGGH 235

The following BLAST results are available for this feature:
BLAST of CmoCh14G019370.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh14G019370.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L443_CUCSA1.5e-3879.43Uncharacterized protein OS=Cucumis sativus GN=Csa_3G131980 PE=4 SV=1[more]
M4E295_BRARP1.5e-0668.04Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
M4DZ60_BRARP5.8e-0675.68Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
A0A078DBM9_BRANA1.0e-0569.43BnaA03g15020D protein OS=Brassica napus GN=BnaA03g15020D PE=4 SV=1[more]
BLAST of CmoCh14G019370.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmoCh14G019370.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778688443|ref|XP_011652751.1|2.2e-3879.43PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis sativus][more]
gi|659077739|ref|XP_008439359.1|1.2e-2577.68PREDICTED: glycine-rich cell wall structural protein-like [Cucumis melo][more]
gi|923568584|ref|XP_013739004.1|1.9e-1068.46PREDICTED: glycine-rich cell wall structural protein 1 [Brassica napus][more]
gi|729445498|ref|XP_010522420.1|6.2e-0978.26PREDICTED: glycine-rich cell wall structural protein 1 isoform X2 [Tarenaya hass... [more]
gi|747088224|ref|XP_011091689.1|1.4e-0873.06PREDICTED: glycine-rich cell wall structural protein-like [Sesamum indicum][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh14G019370CmoCh14G019370gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh14G019370.1CmoCh14G019370.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh14G019370.1.CDS.1CmoCh14G019370.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh14G019370.1.exon.1CmoCh14G019370.1.exon.1exon