Cp4.1LG03g11200 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g11200
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG03 : 11136774 .. 11139113 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGAAGAGTTCGAAAGGGATCCGGAAAATGCTCCATGTTCAACGTTTGAAGCAGAGAGAAAAACGGGACGCCAATGGCTATGGAGAAACAAGCCCTAACAAACCAAATGCCGCTCATGGAATTTCATCTTTCCAACGCGATTATAATTACGAACAAGTATGAACAATCCAACCAACGAATTGATCTCTCGGCTTTGATTTGCTTCCTTCTTTGCTGTCGCTGCTCAATCGATCTCTCCCTGGGCGTTTATAAGGCGGGAGAGATCTAATTTTATTTTCTTCGAATTTCTCCTTCCTCCGCCACTTCATCCATCAATTTTGCCTCAATAATGGGCTGTGGAGAGTCGAAGCTTGCTGTCGCCACCACCGATGGCGTCCTCCTCCGCAAGAAATCCAGCGCACGATCCAAGAACGGATCCAAAGCTGCTGCTGTTGCCGTTGTGGATGATGTGAAGGCTGCGTCAGAGAAAAAAACAGAGAAGATTATCGATGAGGAGAAAATTGATGGCTCTGTGAAGATTGAATCGGAGAAAAAAATAGAGAAGCGAGAGAAAAAGAAGAGCGATGCCGAGAAAATCATTGACTCTGTGAAGTTTGAATCCGAGGAGAAGAGCGATGGCGTTGTGGCGGAGGTCCAGAATCCGGCGATGGAGGTAGCGAAAACAGAGGAGGTCACCTGTGACGACGAGAAGAAGGAGAAGGAGGACGGAAACAATGGCGGTGCTATTGAAAAACAGGTCGCCGGAGAAACAAAAGCAGAGAAGGAGAAGGAGAAGGAGTTCATTGTTTCCGGCAGTGGAATTGAAGTAGCACAGGAAACTAAACCTGCCGTGGAACAGCAGTTGGCTGGAGAAGTAGAACAGGAAAATAAACCTGTGGAGAAAAAGCAGGTGGCCAGAGAGGTAGAACAGAGAATTAAACCTGCTGAGGAAAAGCAGGTAATTAAAACTGTGGATGAAAAGCACTTGCCCATTGAAACGAAGACAGAGAAGAAGGAAGGCGACGATAATGGCGGCAGCGGCAGTGTTGAACAAGTAATCAAACCGTTGGAGGAAAAGCAATTGGCTGAAGAACCCAAAGTAGAGAAGAAAACTGGTCAGTAAACAAATTTCTAACAGCAATTTTATAGCTCTACTGTATATCTAAAATTCTTAACCATTAACGGATCTGCATGGGATAACAATCTAGTTTTTGATCTGGGTTCTAACCTTTCAATTATCTGTCAAGAACTTTAGGTAGCAATTTAAGCATAGGGTATTAAATAGCAAGTATCTTTTCCAAAGGTTGAATTCACATGGTTTATAATTATAACCAAATCGATAACAATAGCAATAACAAATCATTTGATTTCACCCCCCACAAAGATGTAAAGATTTGTCTGATTTATGTGGACAGGAGAGGCAGTGAAATTGAAAGAAGAAACCCAAGCTAAGAAGGAAGAACCCGCTCCAAAAGTTGAACAAACCCAAGCTAAGAAGGAAGAACCAGCTCCAAAAGTTGAACAAACCCAAATCTCAGACACTCCAGATGCCAAGGTGAGTTTGCTAATGATTCAGTAACTTGCAAATCTTGTTATTATTGTTCATACTAATACTTAAAAACGAGATTAAATTATAAGTTTAGTAATATGGACTTTCATTTTTAGTATATTTAGACACAAATCTTCGAGAAAGTTATTGATATCATGATGATCTGAAAAATAAGGTTTGTAGGTTGTCTACACCATTAGGACTCTCCACAATGGTATGATATTTTTCAGTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGACTTACCCAAAAAGCCTTGTGTATTCCTTAATTATAAACTCATGATCATTCCCTAAATTAGCCGATGTCAGACTTTCATCATTCAACACATACTTCGATTGAGAAAGTTATTGATACACGATGATCTGAAAAAATAAGGTTTATATACACGTTTAAACTTTCGATTGAGAAAGTTATTGATATGATGATCGTGTTAGAACGATATGAAAAATAAGGTCTATAGATTGTCTACAAATTTATGGAACGGGGGCTCGTTAATGCAGGGAAATGCAGCAGGTGAATTGGCAGTGAAGGACTCGAAATAGCGCAAAAAAGTGCATTGGAAGGGGCATATGATGGCGGCTACTGGTAAATGATTTTGAGGCCAAATTGAAAGATGATTGGAGAAATAGTTATATATCTTTACACAGAAACACACATATATATAAACTAATTTTTAATGTTGTAAAGATTATAGAATGTTTGGTGATGACTTTAATAAGAACTCCGGTGGTTCATTAAACACTATTTATTTTGAAACTTTTACCTTTTGATTGATGCAAAATTATTC

mRNA sequence

TGGAAGAGTTCGAAAGGGATCCGGAAAATGCTCCATGTTCAACGTTTGAAGCAGAGAGAAAAACGGGACGCCAATGGCTATGGAGAAACAAGCCCTAACAAACCAAATGCCGCTCATGGAATTTCATCTTTCCAACGCGATTATAATTACGAACAAGTATGAACAATCCAACCAACGAATTGATCTCTCGGCTTTGATTTGCTTCCTTCTTTGCTGTCGCTGCTCAATCGATCTCTCCCTGGGCGTTTATAAGGCGGGAGAGATCTAATTTTATTTTCTTCGAATTTCTCCTTCCTCCGCCACTTCATCCATCAATTTTGCCTCAATAATGGGCTGTGGAGAGTCGAAGCTTGCTGTCGCCACCACCGATGGCGTCCTCCTCCGCAAGAAATCCAGCGCACGATCCAAGAACGGATCCAAAGCTGCTGCTGTTGCCGTTGTGGATGATGTGAAGGCTGCGTCAGAGAAAAAAACAGAGAAGATTATCGATGAGGAGAAAATTGATGGCTCTGTGAAGATTGAATCGGAGAAAAAAATAGAGAAGCGAGAGAAAAAGAAGAGCGATGCCGAGAAAATCATTGACTCTGTGAAGTTTGAATCCGAGGAGAAGAGCGATGGCGTTGTGGCGGAGGTCCAGAATCCGGCGATGGAGGTAGCGAAAACAGAGGAGGTCACCTGTGACGACGAGAAGAAGGAGAAGGAGGACGGAAACAATGGCGGTGCTATTGAAAAACAGGTCGCCGGAGAAACAAAAGCAGAGAAGGAGAAGGAGAAGGAGTTCATTGTTTCCGGCAGTGGAATTGAAGTAGCACAGGAAACTAAACCTGCCGTGGAACAGCAGTTGGCTGGAGAAGTAGAACAGGAAAATAAACCTGTGGAGAAAAAGCAGGTGGCCAGAGAGGTAGAACAGAGAATTAAACCTGCTGAGGAAAAGCAGGTAATTAAAACTGTGGATGAAAAGCACTTGCCCATTGAAACGAAGACAGAGAAGAAGGAAGGCGACGATAATGGCGGCAGCGGCAGTGTTGAACAAGTAATCAAACCGTTGGAGGAAAAGCAATTGGCTGAAGAACCCAAAGTAGAGAAGAAAACTGGAGAGGCAGTGAAATTGAAAGAAGAAACCCAAGCTAAGAAGGAAGAACCCGCTCCAAAAGTTGAACAAACCCAAGCTAAGAAGGAAGAACCAGCTCCAAAAGTTGAACAAACCCAAATCTCAGACACTCCAGATGCCAAGGGAAATGCAGCAGGTGAATTGGCAGTGAAGGACTCGAAATAGCGCAAAAAAGTGCATTGGAAGGGGCATATGATGGCGGCTACTGGTAAATGATTTTGAGGCCAAATTGAAAGATGATTGGAGAAATAGTTATATATCTTTACACAGAAACACACATATATATAAACTAATTTTTAATGTTGTAAAGATTATAGAATGTTTGGTGATGACTTTAATAAGAACTCCGGTGGTTCATTAAACACTATTTATTTTGAAACTTTTACCTTTTGATTGATGCAAAATTATTC

Coding sequence (CDS)

ATGGGCTGTGGAGAGTCGAAGCTTGCTGTCGCCACCACCGATGGCGTCCTCCTCCGCAAGAAATCCAGCGCACGATCCAAGAACGGATCCAAAGCTGCTGCTGTTGCCGTTGTGGATGATGTGAAGGCTGCGTCAGAGAAAAAAACAGAGAAGATTATCGATGAGGAGAAAATTGATGGCTCTGTGAAGATTGAATCGGAGAAAAAAATAGAGAAGCGAGAGAAAAAGAAGAGCGATGCCGAGAAAATCATTGACTCTGTGAAGTTTGAATCCGAGGAGAAGAGCGATGGCGTTGTGGCGGAGGTCCAGAATCCGGCGATGGAGGTAGCGAAAACAGAGGAGGTCACCTGTGACGACGAGAAGAAGGAGAAGGAGGACGGAAACAATGGCGGTGCTATTGAAAAACAGGTCGCCGGAGAAACAAAAGCAGAGAAGGAGAAGGAGAAGGAGTTCATTGTTTCCGGCAGTGGAATTGAAGTAGCACAGGAAACTAAACCTGCCGTGGAACAGCAGTTGGCTGGAGAAGTAGAACAGGAAAATAAACCTGTGGAGAAAAAGCAGGTGGCCAGAGAGGTAGAACAGAGAATTAAACCTGCTGAGGAAAAGCAGGTAATTAAAACTGTGGATGAAAAGCACTTGCCCATTGAAACGAAGACAGAGAAGAAGGAAGGCGACGATAATGGCGGCAGCGGCAGTGTTGAACAAGTAATCAAACCGTTGGAGGAAAAGCAATTGGCTGAAGAACCCAAAGTAGAGAAGAAAACTGGAGAGGCAGTGAAATTGAAAGAAGAAACCCAAGCTAAGAAGGAAGAACCCGCTCCAAAAGTTGAACAAACCCAAGCTAAGAAGGAAGAACCAGCTCCAAAAGTTGAACAAACCCAAATCTCAGACACTCCAGATGCCAAGGGAAATGCAGCAGGTGAATTGGCAGTGAAGGACTCGAAATAG

Protein sequence

MGCGESKLAVATTDGVLLRKKSSARSKNGSKAAAVAVVDDVKAASEKKTEKIIDEEKIDGSVKIESEKKIEKREKKKSDAEKIIDSVKFESEEKSDGVVAEVQNPAMEVAKTEEVTCDDEKKEKEDGNNGGAIEKQVAGETKAEKEKEKEFIVSGSGIEVAQETKPAVEQQLAGEVEQENKPVEKKQVAREVEQRIKPAEEKQVIKTVDEKHLPIETKTEKKEGDDNGGSGSVEQVIKPLEEKQLAEEPKVEKKTGEAVKLKEETQAKKEEPAPKVEQTQAKKEEPAPKVEQTQISDTPDAKGNAAGELAVKDSK
Homology
[Close]
BLAST of Cp4.1LG03g11200 vs. TrEMBL
Match: A0A0A0L8Y3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G152040 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 8.4e-34
Identity = 154/349 (44.13%), Postives = 189/349 (54.15%), Query Frame = 1 

Query: 1   MGCGESKLAVATTDGVLLRKKSSA-RSKNGSKAAAVAVVDDVKAASEKKTEKIIDEEKID 60
           MGCGESKLA+ T DG+L RKKSSA RSK+G +A   +      A S     K+    KID
Sbjct: 101 MGCGESKLAIDTADGILHRKKSSASRSKSGRRAGDGSKTS--TAHSSSADLKVPSLNKID 160

Query: 61  GSVKIE-SEKKIEKREKKKSD-----------AEKIIDSVKFESEEKSDGVV-------- 120
            SVK+E SE K+E+R++KK D            +KI  +VK ESEEKSD +V        
Sbjct: 161 SSVKVESSENKVEQRDEKKIDDVAKIEPEVKTEQKIDAAVKIESEEKSDSIVVTEGVKTE 220

Query: 121 --------AEVQNPAMEVA-----KTEEVTCDDEKKEKEDGNNGGAIEKQVAGETKAEKE 180
                    + +    EVA     K +EV    EKKE EDG NGG++EKQVAGETKAE++
Sbjct: 221 ERKEKEVAGDSEKKEKEVASSSEKKEKEVASSSEKKENEDGGNGGSVEKQVAGETKAEEK 280

Query: 181 KEKEFIVSGSGIEVAQETKPAVEQQLAGEVEQEN-KPVEKKQVAREVEQRIKPAEEKQVI 240
           KE      GS ++V Q  K   E+ LAGEVE+E  K VEKK+VA                
Sbjct: 281 KE------GSEVKVEQGVKGVEEKLLAGEVEKEGIKAVEKKEVAG--------------- 340

Query: 241 KTVDEKHLPIETKTEKKEGDDNGGSGSVEQVIKPLEEKQLAEEPKVEKKTGEAVKLKEET 300
                     ETKTEKKEG      G+VE+ IK  EEK+LAEEPKVEK+ GEAVKLKEE+
Sbjct: 341 ----------ETKTEKKEG------GAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEES 396

Query: 301 QAKKEEPAPKVEQTQAKKEEPAPKVEQTQISDTPDAKGNAAGELAVKDS 315
           + KKEE       TQ     P       Q  +  D K N  G+L VK+S
Sbjct: 401 EGKKEE-------TQISAPTP------LQDKNLKDPKEN-GGDLEVKNS 396

[Close]
BLAST of Cp4.1LG03g11200 vs. NCBI nr
Match: gi|778678782|ref|XP_004134472.2| (PREDICTED: histone-lysine N-methyltransferase, H3 lysine-79 specific-like [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 1.2e-33
Identity = 154/349 (44.13%), Postives = 189/349 (54.15%), Query Frame = 1 

Query: 1   MGCGESKLAVATTDGVLLRKKSSA-RSKNGSKAAAVAVVDDVKAASEKKTEKIIDEEKID 60
           MGCGESKLA+ T DG+L RKKSSA RSK+G +A   +      A S     K+    KID
Sbjct: 1   MGCGESKLAIDTADGILHRKKSSASRSKSGRRAGDGSKTS--TAHSSSADLKVPSLNKID 60

Query: 61  GSVKIE-SEKKIEKREKKKSD-----------AEKIIDSVKFESEEKSDGVV-------- 120
            SVK+E SE K+E+R++KK D            +KI  +VK ESEEKSD +V        
Sbjct: 61  SSVKVESSENKVEQRDEKKIDDVAKIEPEVKTEQKIDAAVKIESEEKSDSIVVTEGVKTE 120

Query: 121 --------AEVQNPAMEVA-----KTEEVTCDDEKKEKEDGNNGGAIEKQVAGETKAEKE 180
                    + +    EVA     K +EV    EKKE EDG NGG++EKQVAGETKAE++
Sbjct: 121 ERKEKEVAGDSEKKEKEVASSSEKKEKEVASSSEKKENEDGGNGGSVEKQVAGETKAEEK 180

Query: 181 KEKEFIVSGSGIEVAQETKPAVEQQLAGEVEQEN-KPVEKKQVAREVEQRIKPAEEKQVI 240
           KE      GS ++V Q  K   E+ LAGEVE+E  K VEKK+VA                
Sbjct: 181 KE------GSEVKVEQGVKGVEEKLLAGEVEKEGIKAVEKKEVAG--------------- 240

Query: 241 KTVDEKHLPIETKTEKKEGDDNGGSGSVEQVIKPLEEKQLAEEPKVEKKTGEAVKLKEET 300
                     ETKTEKKEG      G+VE+ IK  EEK+LAEEPKVEK+ GEAVKLKEE+
Sbjct: 241 ----------ETKTEKKEG------GAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEES 296

Query: 301 QAKKEEPAPKVEQTQAKKEEPAPKVEQTQISDTPDAKGNAAGELAVKDS 315
           + KKEE       TQ     P       Q  +  D K N  G+L VK+S
Sbjct: 301 EGKKEE-------TQISAPTP------LQDKNLKDPKEN-GGDLEVKNS 296

[Close]
BLAST of Cp4.1LG03g11200 vs. NCBI nr
Match: gi|700201944|gb|KGN57077.1| (hypothetical protein Csa_3G152040 [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 1.2e-33
Identity = 154/349 (44.13%), Postives = 189/349 (54.15%), Query Frame = 1 

Query: 1   MGCGESKLAVATTDGVLLRKKSSA-RSKNGSKAAAVAVVDDVKAASEKKTEKIIDEEKID 60
           MGCGESKLA+ T DG+L RKKSSA RSK+G +A   +      A S     K+    KID
Sbjct: 101 MGCGESKLAIDTADGILHRKKSSASRSKSGRRAGDGSKTS--TAHSSSADLKVPSLNKID 160

Query: 61  GSVKIE-SEKKIEKREKKKSD-----------AEKIIDSVKFESEEKSDGVV-------- 120
            SVK+E SE K+E+R++KK D            +KI  +VK ESEEKSD +V        
Sbjct: 161 SSVKVESSENKVEQRDEKKIDDVAKIEPEVKTEQKIDAAVKIESEEKSDSIVVTEGVKTE 220

Query: 121 --------AEVQNPAMEVA-----KTEEVTCDDEKKEKEDGNNGGAIEKQVAGETKAEKE 180
                    + +    EVA     K +EV    EKKE EDG NGG++EKQVAGETKAE++
Sbjct: 221 ERKEKEVAGDSEKKEKEVASSSEKKEKEVASSSEKKENEDGGNGGSVEKQVAGETKAEEK 280

Query: 181 KEKEFIVSGSGIEVAQETKPAVEQQLAGEVEQEN-KPVEKKQVAREVEQRIKPAEEKQVI 240
           KE      GS ++V Q  K   E+ LAGEVE+E  K VEKK+VA                
Sbjct: 281 KE------GSEVKVEQGVKGVEEKLLAGEVEKEGIKAVEKKEVAG--------------- 340

Query: 241 KTVDEKHLPIETKTEKKEGDDNGGSGSVEQVIKPLEEKQLAEEPKVEKKTGEAVKLKEET 300
                     ETKTEKKEG      G+VE+ IK  EEK+LAEEPKVEK+ GEAVKLKEE+
Sbjct: 341 ----------ETKTEKKEG------GAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEES 396

Query: 301 QAKKEEPAPKVEQTQAKKEEPAPKVEQTQISDTPDAKGNAAGELAVKDS 315
           + KKEE       TQ     P       Q  +  D K N  G+L VK+S
Sbjct: 401 EGKKEE-------TQISAPTP------LQDKNLKDPKEN-GGDLEVKNS 396

[Close]
BLAST of Cp4.1LG03g11200 vs. NCBI nr
Match: gi|659076689|ref|XP_008438816.1| (PREDICTED: gelsolin-related protein of 125 kDa-like isoform X3 [Cucumis melo])

HSP 1 Score: 145.6 bits (366), Expect = 1.5e-31
Identity = 148/336 (44.05%), Postives = 185/336 (55.06%), Query Frame = 1 

Query: 1   MGCGESKLAVATTDGVLLRKKSSA-RSKNGSKAA-------AVAVVDDVKAASEKKTEKI 60
           MGCGESKLA++T DG+L RKKSSA RSK+GS+AA       A + V D+K  S  K +  
Sbjct: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60

Query: 61  I-------------DEEKIDGSVKIESEKKIEKREKKKSDAEKIIDSVKFESEEKSDGVV 120
           +             DE+KID   K E E KIE++       E +    K E E   D   
Sbjct: 61  LKVVESSENKVEQRDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGDNEK 120

Query: 121 AEVQNPAMEVAKTEEVTCDDEKKEKEDGNNGGAIEKQVAGETKAEKEKEKEFIVSGSGIE 180
            EV   + +  K +EV+   EKKEKEDG NGG++EKQVAGETKAE++KE    V GS ++
Sbjct: 121 KEVAGDSEKKEKEKEVSGGSEKKEKEDGGNGGSVEKQVAGETKAEEKKEDG--VKGSEVK 180

Query: 181 VAQETKPAVEQQLAGEVEQENKPVEKKQVAREVEQRIKPAEEKQVIKTVDEKHLPIET-K 240
           V               VEQ  K VE+K +  EV        EK  IK  D+K +  ET K
Sbjct: 181 V---------------VEQGVKAVEEKPLGGEV--------EKAGIKAADKKEVAGETIK 240

Query: 241 TEKKEGDDNGGSGSVEQVIKPLEEKQLAEEPKVEKKTGEAVKLKEETQAKKEEPAPKVEQ 300
           TEKKEG      G+VE+ IK  EEK+LAEEPKVEK+ GEAVKLKEE++AKKEE       
Sbjct: 241 TEKKEG------GAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEE------- 291

Query: 301 TQAKKEEPAPKVEQTQISDTPDAKGNAAGELAVKDS 315
           TQ+    P       Q  +  D K N  G+L VK+S
Sbjct: 301 TQSSAPTP------LQDKNLKDPKEN-GGDLGVKNS 291

[Close]
BLAST of Cp4.1LG03g11200 vs. NCBI nr
Match: gi|659076687|ref|XP_008438815.1| (PREDICTED: nucleolar protein 58-like isoform X2 [Cucumis melo])

HSP 1 Score: 142.9 bits (359), Expect = 9.6e-31
Identity = 147/336 (43.75%), Postives = 183/336 (54.46%), Query Frame = 1 

Query: 1   MGCGESKLAVATTDGVLLRKKSSA-RSKNGSKAA-------AVAVVDDVKAASEKKTEKI 60
           MGCGESKLA++T DG+L RKKSSA RSK+GS+AA       A + V D+K  S  K +  
Sbjct: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60

Query: 61  I-------------DEEKIDGSVKIESEKKIEKREKKKSDAEKIIDSVKFESEEKSDGVV 120
           +             DE+KID   K E E KIE++       E +    K E E   D   
Sbjct: 61  LKVVESSENKVEQRDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGDNEK 120

Query: 121 AEVQNPAMEVAKTEEVTCDDEKKEKEDGNNGGAIEKQVAGETKAEKEKEKEFIVSGSGIE 180
            E +       K +EV+   EKKEKEDG NGG++EKQVAGETKAE++KE    V GS ++
Sbjct: 121 KEKEVSGGSEKKEKEVSAGGEKKEKEDGGNGGSVEKQVAGETKAEEKKEDG--VKGSEVK 180

Query: 181 VAQETKPAVEQQLAGEVEQENKPVEKKQVAREVEQRIKPAEEKQVIKTVDEKHLPIET-K 240
           V               VEQ  K VE+K +  EV        EK  IK  D+K +  ET K
Sbjct: 181 V---------------VEQGVKAVEEKPLGGEV--------EKAGIKAADKKEVAGETIK 240

Query: 241 TEKKEGDDNGGSGSVEQVIKPLEEKQLAEEPKVEKKTGEAVKLKEETQAKKEEPAPKVEQ 300
           TEKKEG      G+VE+ IK  EEK+LAEEPKVEK+ GEAVKLKEE++AKKEE       
Sbjct: 241 TEKKEG------GAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEE------- 291

Query: 301 TQAKKEEPAPKVEQTQISDTPDAKGNAAGELAVKDS 315
           TQ+    P       Q  +  D K N  G+L VK+S
Sbjct: 301 TQSSAPTP------LQDKNLKDPKEN-GGDLGVKNS 291

[Close]
BLAST of Cp4.1LG03g11200 vs. NCBI nr
Match: gi|659076685|ref|XP_008438814.1| (PREDICTED: caldesmon-like isoform X1 [Cucumis melo])

HSP 1 Score: 135.6 bits (340), Expect = 1.5e-28
Identity = 151/348 (43.39%), Postives = 187/348 (53.74%), Query Frame = 1 

Query: 1   MGCGESKLAVATTDGVLLRKKSSA-RSKNGSK--------AAAVAVVD------------ 60
           MGCGESKLA++T DG+L RKKSSA RSK+GS+        AA  +V D            
Sbjct: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60

Query: 61  -DVKAASEKKTEKIIDEEKIDGSVKIESEKKIEKREKKKSDAEKIIDSVKFESEEKSDGV 120
             V  +SE K E+  DE+KID   K E E KIE++       E +    K E E   D  
Sbjct: 61  LKVVESSENKVEQR-DEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGDNE 120

Query: 121 VAEVQNPA------MEVA-----KTEEVTCDDEKKEKEDGNNGGAIEKQVAGETKAEKEK 180
             EV   +       EV+     K +EV+   EKKEKEDG NGG++EKQVAGETKAE++K
Sbjct: 121 KKEVAGDSEKKEKEKEVSGGSEKKEKEVSAGGEKKEKEDGGNGGSVEKQVAGETKAEEKK 180

Query: 181 EKEFIVSGSGIEVAQETKPAVEQQLAGEVEQENKPVEKKQVAREVEQRIKPAEEKQVIKT 240
           E    V GS ++V               VEQ  K VE+K +  EV        EK  IK 
Sbjct: 181 EDG--VKGSEVKV---------------VEQGVKAVEEKPLGGEV--------EKAGIKA 240

Query: 241 VDEKHLPIET-KTEKKEGDDNGGSGSVEQVIKPLEEKQLAEEPKVEKKTGEAVKLKEETQ 300
            D+K +  ET KTEKKEG      G+VE+ IK  EEK+LAEEPKVEK+ GEAVKLKEE++
Sbjct: 241 ADKKEVAGETIKTEKKEG------GAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESE 300

Query: 301 AKKEEPAPKVEQTQAKKEEPAPKVEQTQISDTPDAKGNAAGELAVKDS 315
           AKKEE       TQ+    P       Q  +  D K N  G+L VK+S
Sbjct: 301 AKKEE-------TQSSAPTP------LQDKNLKDPKEN-GGDLGVKNS 302

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g11200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG03g11200 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8Y3_CUCSA8.4e-3444.13Uncharacterized protein OS=Cucumis sativus GN=Csa_3G152040 PE=4 SV=1[more]
BLAST of Cp4.1LG03g11200 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG03g11200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778678782|ref|XP_004134472.2|1.2e-3344.13PREDICTED: histone-lysine N-methyltransferase, H3 lysine-79 specific-like [Cucum... [more]
gi|700201944|gb|KGN57077.1|1.2e-3344.13hypothetical protein Csa_3G152040 [Cucumis sativus][more]
gi|659076689|ref|XP_008438816.1|1.5e-3144.05PREDICTED: gelsolin-related protein of 125 kDa-like isoform X3 [Cucumis melo][more]
gi|659076687|ref|XP_008438815.1|9.6e-3143.75PREDICTED: nucleolar protein 58-like isoform X2 [Cucumis melo][more]
gi|659076685|ref|XP_008438814.1|1.5e-2843.39PREDICTED: caldesmon-like isoform X1 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016874 ligase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g11200.1Cp4.1LG03g11200.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 251..271
scor

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g11200Cla021712Watermelon (97103) v1cpewmB613
Cp4.1LG03g11200ClCG05G005880Watermelon (Charleston Gray)cpewcgB559
Cp4.1LG03g11200Lsi05G015110Bottle gourd (USVL1VR-Ls)cpelsiB512
Cp4.1LG03g11200MELO3C006616.2Melon (DHL92) v3.6.1cpemedB693
Cp4.1LG03g11200CsaV3_3G014230Cucumber (Chinese Long) v3cpecucB0759
Cp4.1LG03g11200Bhi01G000686Wax gourdcpewgoB0783
Cp4.1LG03g11200CsGy3G014140Cucumber (Gy14) v2cgybcpeB406
Cp4.1LG03g11200Carg20128Silver-seed gourdcarcpeB1164
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g11200Wax gourdcpewgoB0762
Cp4.1LG03g11200Cucurbita pepo (Zucchini)cpecpeB184
Cp4.1LG03g11200Cucurbita pepo (Zucchini)cpecpeB333
Cp4.1LG03g11200Cucurbita pepo (Zucchini)cpecpeB335
Cp4.1LG03g11200Cucurbita pepo (Zucchini)cpecpeB337
Cp4.1LG03g11200Cucurbita pepo (Zucchini)cpecpeB482
Cp4.1LG03g11200Cucumber (Gy14) v1cgycpeB0682
Cp4.1LG03g11200Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g11200Cucurbita maxima (Rimu)cmacpeB403
Cp4.1LG03g11200Cucurbita maxima (Rimu)cmacpeB837
Cp4.1LG03g11200Cucurbita maxima (Rimu)cmacpeB928
Cp4.1LG03g11200Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g11200Cucurbita moschata (Rifu)cmocpeB365
Cp4.1LG03g11200Cucurbita moschata (Rifu)cmocpeB787
Cp4.1LG03g11200Cucurbita moschata (Rifu)cmocpeB862
Cp4.1LG03g11200Wild cucumber (PI 183967)cpecpiB611
Cp4.1LG03g11200Cucumber (Chinese Long) v2cpecuB609
Cp4.1LG03g11200Bottle gourd (USVL1VR-Ls)cpelsiB484
Cp4.1LG03g11200Watermelon (Charleston Gray)cpewcgB562
Cp4.1LG03g11200Watermelon (97103) v1cpewmB623
Cp4.1LG03g11200Melon (DHL92) v3.5.1cpemeB555
Cp4.1LG03g11200Melon (DHL92) v3.5.1cpemeB585
Cp4.1LG03g11200Cucumber (Gy14) v2cgybcpeB833
Cp4.1LG03g11200Melon (DHL92) v3.6.1cpemedB659
Cp4.1LG03g11200Silver-seed gourdcarcpeB0106
Cp4.1LG03g11200Silver-seed gourdcarcpeB0860
Cp4.1LG03g11200Silver-seed gourdcarcpeB1201
Cp4.1LG03g11200Cucumber (Chinese Long) v3cpecucB0783