MELO3C006616.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C006616.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionDNA ligase 1-like
Locationchr06 : 4596975 .. 4598760 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTGCGGAGAGTCCAAGCTTGCTATCTCCACTGCCGACGGCATTCTCCACCGCAAGAAATCATCCGCTAGTCGATCTAAGAGCGGAAGCAGAGCAGCTGATGGATCCAAGACCGGTGCTGCCGATTCCTCTGTCGCTGATTTGAAGGTTCCGTCTCTGAACAAAATCGATAGCTCTCTCAAGGTCGTTGAATCCTCCGAGAATAAGGTAGAGCAGCGAGATGAGAAGAAGATCGATGATGTTGCGAAGACTGAACCGGAGGTTAAGATAGAGCAGAAGATCGATGCGGCTGTGAAGACTGAAGGAGTGAAAACAGAGGAGAAAAGAGAGAAGGAGGTTGCCGGCGACAATGAGAAGAAGGAGGTTGCCGGCGACAGTGAGAAGAAGGAGAAGGAGAAGGAGGTTTCCGGCGGCAGTGAGAAGAAGGAGAAGGAGGTTTCCGCCGGTGGTGAGAAGAAGGAGAAGGAGGACGGAGGGAATGGCGGTTCTGTTGAAAAACAGGTGGCCGGAGAAACGAAAGCAGAGGAGAAGAAGGAGGACGGTGTTAAGGGGAGTGAAGTTAAGGTCGTAGAACAGGGAGTAAAAGCCGTTGAGGAAAAACCGTTGGGCGGAGAAGTTGAAAAGGCAGGAATTAAAGCTGCAGATAAAAAGGAGGTGGCCGGAGAAACGATTAAAACGGAGAAGAAGGAAGGCGGGGCTGTTGAAGAAGGAATCAAAGCTGCGGAGGAAAAAAAATTGGCTGAAGAACCCAAAGTAGAGAAGCAAAATGGTCAGTAAAATTTTGACACTCTCCAACTAATTTATTTCATACAAATTTACAAAAATGTCAAAATGATTGGAAATAATTACTATTTTAATTCACTTTTTCATATTTAAAAATATTTTCTTTTAAGCTCTTTAAGGACTAAAAATAAAAATATGGTAAAAGAAATATAATATTTAACAAAATATTTACCAAAAAAAACATAAATTTGTTTCTATTAGTTTCTCAAATTTTTATATTTTTGAAAAAATCCTTTCCAAGAATGTAATGGTAGTAGGCGAGGACAAACAAACTACACTTTCATGTACAACAAGATTTCCACTCTTAAAAAAAGTCAAACAAGTCAAAGATCTTTGGTGAGCTCGTAAAAGTTTGAAAAAAAAGATTATATTAATAAAATATTTACAAATATAATAAAATTTTACTTTCGATAATGTTTTGTCATTTAAAACCATTTCTGTCACGCATTTATTCACTAAATCACATTGTTTATAATTTACTATTAAACCAAAACGATGACATTATAACAATGAATACATATTTGATTTTGCAAGCATAACTCAACTTTAAACATCGTTTACCTTCAAAATTAGAACTTTAATTCCCCGAAGAAAAAAATATTTATCTTTCCTGTAAATAGTTGGAATGAAGTAAAAAGAAATGACATATGATTTAAAAGTTGTAAAAGTCTAAAAAATGTAGTTTGTGTGGACAGGAGAGGCAGTGAAATTGAAGGAAGAAAGTGAAGCTAAGAAGGAAGAAACCCAAAGCTCAGCACCCACTCCACTACAAGACAAGAATCTCAAAGATCCCAAGGTTTGATTTCTTATTATTCTTCACATTAACATTATCATTAGGGGAAAACATTTTTTTTTTTTTTAACTACAAATTTTATTCCTGAACTCTGAAATTTGTGTGCAGAGATTGTTACTAATGGATTAATTAATGCAGGAAAATGGAGGTGATTTGGGAGTGAAGAACTCAACAGCAGAGGAAAAGAAAATAGCACCAACTAAGTGA

mRNA sequence

ATGGGTTGCGGAGAGTCCAAGCTTGCTATCTCCACTGCCGACGGCATTCTCCACCGCAAGAAATCATCCGCTAGTCGATCTAAGAGCGGAAGCAGAGCAGCTGATGGATCCAAGACCGGTGCTGCCGATTCCTCTGTCGCTGATTTGAAGGTTCCGTCTCTGAACAAAATCGATAGCTCTCTCAAGGTCGTTGAATCCTCCGAGAATAAGGTAGAGCAGCGAGATGAGAAGAAGATCGATGATGTTGCGAAGACTGAACCGGAGGTTAAGATAGAGCAGAAGATCGATGCGGCTGTGAAGACTGAAGGAGTGAAAACAGAGGAGAAAAGAGAGAAGGAGGTTGCCGGCGACAATGAGAAGAAGGAGGTTGCCGGCGACAGTGAGAAGAAGGAGAAGGAGAAGGAGGTTTCCGGCGGCAGTGAGAAGAAGGAGAAGGAGGTTTCCGCCGGTGGTGAGAAGAAGGAGAAGGAGGACGGAGGGAATGGCGGTTCTGTTGAAAAACAGGTGGCCGGAGAAACGAAAGCAGAGGAGAAGAAGGAGGACGGTGTTAAGGGGAGTGAAGTTAAGGTCGTAGAACAGGGAGTAAAAGCCGTTGAGGAAAAACCGTTGGGCGGAGAAGTTGAAAAGGCAGGAATTAAAGCTGCAGATAAAAAGGAGGTGGCCGGAGAAACGATTAAAACGGAGAAGAAGGAAGGCGGGGCTGTTGAAGAAGGAATCAAAGCTGCGGAGGAAAAAAAATTGGCTGAAGAACCCAAAGTAGAGAAGCAAAATGGAGAGGCAGTGAAATTGAAGGAAGAAAGTGAAGCTAAGAAGGAAGAAACCCAAAGCTCAGCACCCACTCCACTACAAGACAAGAATCTCAAAGATCCCAAGGAAAATGGAGGTGATTTGGGAGTGAAGAACTCAACAGCAGAGGAAAAGAAAATAGCACCAACTAAGTGA

Coding sequence (CDS)

ATGGGTTGCGGAGAGTCCAAGCTTGCTATCTCCACTGCCGACGGCATTCTCCACCGCAAGAAATCATCCGCTAGTCGATCTAAGAGCGGAAGCAGAGCAGCTGATGGATCCAAGACCGGTGCTGCCGATTCCTCTGTCGCTGATTTGAAGGTTCCGTCTCTGAACAAAATCGATAGCTCTCTCAAGGTCGTTGAATCCTCCGAGAATAAGGTAGAGCAGCGAGATGAGAAGAAGATCGATGATGTTGCGAAGACTGAACCGGAGGTTAAGATAGAGCAGAAGATCGATGCGGCTGTGAAGACTGAAGGAGTGAAAACAGAGGAGAAAAGAGAGAAGGAGGTTGCCGGCGACAATGAGAAGAAGGAGGTTGCCGGCGACAGTGAGAAGAAGGAGAAGGAGAAGGAGGTTTCCGGCGGCAGTGAGAAGAAGGAGAAGGAGGTTTCCGCCGGTGGTGAGAAGAAGGAGAAGGAGGACGGAGGGAATGGCGGTTCTGTTGAAAAACAGGTGGCCGGAGAAACGAAAGCAGAGGAGAAGAAGGAGGACGGTGTTAAGGGGAGTGAAGTTAAGGTCGTAGAACAGGGAGTAAAAGCCGTTGAGGAAAAACCGTTGGGCGGAGAAGTTGAAAAGGCAGGAATTAAAGCTGCAGATAAAAAGGAGGTGGCCGGAGAAACGATTAAAACGGAGAAGAAGGAAGGCGGGGCTGTTGAAGAAGGAATCAAAGCTGCGGAGGAAAAAAAATTGGCTGAAGAACCCAAAGTAGAGAAGCAAAATGGAGAGGCAGTGAAATTGAAGGAAGAAAGTGAAGCTAAGAAGGAAGAAACCCAAAGCTCAGCACCCACTCCACTACAAGACAAGAATCTCAAAGATCCCAAGGAAAATGGAGGTGATTTGGGAGTGAAGAACTCAACAGCAGAGGAAAAGAAAATAGCACCAACTAAGTGA

Protein sequence

MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSSLKVVESSENKVEQRDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGDNEKKEVAGDSEKKEKEKEVSGGSEKKEKEVSAGGEKKEKEDGGNGGSVEKQVAGETKAEEKKEDGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTEKKEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLKDPKENGGDLGVKNSTAEEKKIAPTK
Homology
[Close]
BLAST of MELO3C006616.2 vs. NCBI nr
Match: XP_008438814.1 (PREDICTED: DNA ligase 1-like [Cucumis melo])

HSP 1 Score: 223.8 bits (569), Expect = 8.2e-55
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0 

Query: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60
           MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS
Sbjct: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60

Query: 61  LKVVESSENKVEQRDEKKIDDVAXXXXXXXXXXXXXXXXXXXGVKTEEKREKEVAXXXXX 120
           LKVVESSENKVEQRDEKKIDDVAXXXXXXXXXXXXXXXXXXXGVKTEEKREKEVAXXXXX
Sbjct: 61  LKVVESSENKVEQRDEKKIDDVAXXXXXXXXXXXXXXXXXXXGVKTEEKREKEVAXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXLGGEXXXXXXXXXXXXXXXXXXXXXEKXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXLGGEXXXXXXXXXXXXXXXXXXXXXEKXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXLGGEXXXXXXXXXXXXXXXXXXXXXEKXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXKVEKQNGEAVKLXXXXXXXXXETQSSAPTPLQDKNLKDPKENGGDLGVK 300
           XXXXXXXXXXXKVEKQNGEAVKLXXXXXXXXXETQSSAPTPLQDKNLKDPKENGGDLGVK
Sbjct: 241 XXXXXXXXXXXKVEKQNGEAVKLXXXXXXXXXETQSSAPTPLQDKNLKDPKENGGDLGVK 300

Query: 301 NSTAEEKKIAPTK 314
           NSTAEEKKIAPTK
Sbjct: 301 NSTAEEKKIAPTK 313

[Close]
BLAST of MELO3C006616.2 vs. NCBI nr
Match: KGN57077.1 (hypothetical protein Csa_3G152040 [Cucumis sativus])

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-13
Identity = 225/323 (69.66%), Postives = 228/323 (70.59%), Query Frame = 0 

Query: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLN----- 60
           MGCGESKLAI TADGILHRKKSSASRSKSG RA DGSKT  A SS ADLKVPSLN     
Sbjct: 101 MGCGESKLAIDTADGILHRKKSSASRSKSGRRAGDGSKTSTAHSSSADLKVPSLNXXXXX 160

Query: 61  ------KIDSSLKVVESSENKVEQRDEKKIDDVAXXXXXXXXXXXXXXXXXXXGVKTEEK 120
                                             XXXXXXXXXXXXXXXX   GVKTEE+
Sbjct: 161 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEGVKTEER 220

Query: 121 REKEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           +EKEVA                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 221 KEKEVA----------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 280

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGEXXXXXXXXXXXXXXXXXXXXXEK 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GE  XXXXXXXXXXXXXXXXXXX+K
Sbjct: 281 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVEXXXXXXXXXXXXXXXXXXXKK 340

Query: 241 XXXXXXXXXXXXXXXXXXXXXXKVEKQNGEAVKLXXXXXXXXXETQSSAPTPLQDKNLKD 300
             XXXXXXXXXXXXXXXXXXXX            X        ETQ SAPTPLQDKNLKD
Sbjct: 341 -EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEESEGKKEETQISAPTPLQDKNLKD 400

Query: 301 PKENGGDLGVKNSTAEEKKIAPT 313
           PKENGGDL VKNST EEKKIAPT
Sbjct: 401 PKENGGDLEVKNSTTEEKKIAPT 406

[Close]
BLAST of MELO3C006616.2 vs. NCBI nr
Match: XP_004134472.2 (PREDICTED: histone-lysine N-methyltransferase, H3 lysine-79 specific-like [Cucumis sativus])

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-13
Identity = 225/323 (69.66%), Postives = 228/323 (70.59%), Query Frame = 0 

Query: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLN----- 60
           MGCGESKLAI TADGILHRKKSSASRSKSG RA DGSKT  A SS ADLKVPSLN     
Sbjct: 1   MGCGESKLAIDTADGILHRKKSSASRSKSGRRAGDGSKTSTAHSSSADLKVPSLNXXXXX 60

Query: 61  ------KIDSSLKVVESSENKVEQRDEKKIDDVAXXXXXXXXXXXXXXXXXXXGVKTEEK 120
                                             XXXXXXXXXXXXXXXX   GVKTEE+
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEGVKTEER 120

Query: 121 REKEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           +EKEVA                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 KEKEVA----------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGEXXXXXXXXXXXXXXXXXXXXXEK 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GE  XXXXXXXXXXXXXXXXXXX+K
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVEXXXXXXXXXXXXXXXXXXXKK 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXKVEKQNGEAVKLXXXXXXXXXETQSSAPTPLQDKNLKD 300
             XXXXXXXXXXXXXXXXXXXX            X        ETQ SAPTPLQDKNLKD
Sbjct: 241 -EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEESEGKKEETQISAPTPLQDKNLKD 300

Query: 301 PKENGGDLGVKNSTAEEKKIAPT 313
           PKENGGDL VKNST EEKKIAPT
Sbjct: 301 PKENGGDLEVKNSTTEEKKIAPT 306

[Close]
BLAST of MELO3C006616.2 vs. NCBI nr
Match: XP_022948567.1 (nucleolar protein 58-like [Cucurbita moschata])

HSP 1 Score: 76.6 bits (187), Expect = 1.6e-10
Identity = 51/78 (65.38%), Postives = 60/78 (76.92%), Query Frame = 0 

Query: 1  MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60
          MGCGESKLA++TADG L RKKSSASR+KS  +A DGSK+G AD  VADLKV    KID  
Sbjct: 1  MGCGESKLAVATADGSLPRKKSSASRTKSSRKAVDGSKSG-ADLPVADLKVGE-EKIDGD 60

Query: 61 LKVVESSENKVEQRDEKK 79
          +KV   S+NK+EQR E+K
Sbjct: 61 VKV--KSDNKMEQRVEEK 74

[Close]
BLAST of MELO3C006616.2 vs. NCBI nr
Match: XP_023538936.1 (cilia- and flagella-associated protein 251-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 76.6 bits (187), Expect = 1.6e-10
Identity = 51/78 (65.38%), Postives = 60/78 (76.92%), Query Frame = 0 

Query: 1  MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60
          MGCGESKLA++TADG L RKKSSASR+KS  +A DGSK+G AD  VADLKV    KID  
Sbjct: 1  MGCGESKLAVATADGSLPRKKSSASRTKSSRKAVDGSKSG-ADLPVADLKVGE-EKIDGD 60

Query: 61 LKVVESSENKVEQRDEKK 79
          +KV   S+NK+EQR E+K
Sbjct: 61 VKV--KSDNKMEQRVEEK 74

[Close]
BLAST of MELO3C006616.2 vs. TrEMBL
Match: tr|A0A1S3AXZ0|A0A1S3AXZ0_CUCME (DNA ligase 1-like OS=Cucumis melo OX=3656 GN=LOC103483804 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 5.5e-55
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0 

Query: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60
           MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS
Sbjct: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60

Query: 61  LKVVESSENKVEQRDEKKIDDVAXXXXXXXXXXXXXXXXXXXGVKTEEKREKEVAXXXXX 120
           LKVVESSENKVEQRDEKKIDDVAXXXXXXXXXXXXXXXXXXXGVKTEEKREKEVAXXXXX
Sbjct: 61  LKVVESSENKVEQRDEKKIDDVAXXXXXXXXXXXXXXXXXXXGVKTEEKREKEVAXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXLGGEXXXXXXXXXXXXXXXXXXXXXEKXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXLGGEXXXXXXXXXXXXXXXXXXXXXEKXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXLGGEXXXXXXXXXXXXXXXXXXXXXEKXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXKVEKQNGEAVKLXXXXXXXXXETQSSAPTPLQDKNLKDPKENGGDLGVK 300
           XXXXXXXXXXXKVEKQNGEAVKLXXXXXXXXXETQSSAPTPLQDKNLKDPKENGGDLGVK
Sbjct: 241 XXXXXXXXXXXKVEKQNGEAVKLXXXXXXXXXETQSSAPTPLQDKNLKDPKENGGDLGVK 300

Query: 301 NSTAEEKKIAPTK 314
           NSTAEEKKIAPTK
Sbjct: 301 NSTAEEKKIAPTK 313

[Close]
BLAST of MELO3C006616.2 vs. TrEMBL
Match: tr|A0A0A0L8Y3|A0A0A0L8Y3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G152040 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 8.0e-14
Identity = 225/323 (69.66%), Postives = 228/323 (70.59%), Query Frame = 0 

Query: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLN----- 60
           MGCGESKLAI TADGILHRKKSSASRSKSG RA DGSKT  A SS ADLKVPSLN     
Sbjct: 101 MGCGESKLAIDTADGILHRKKSSASRSKSGRRAGDGSKTSTAHSSSADLKVPSLNXXXXX 160

Query: 61  ------KIDSSLKVVESSENKVEQRDEKKIDDVAXXXXXXXXXXXXXXXXXXXGVKTEEK 120
                                             XXXXXXXXXXXXXXXX   GVKTEE+
Sbjct: 161 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTEGVKTEER 220

Query: 121 REKEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           +EKEVA                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 221 KEKEVA----------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 280

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGEXXXXXXXXXXXXXXXXXXXXXEK 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GE  XXXXXXXXXXXXXXXXXXX+K
Sbjct: 281 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVEXXXXXXXXXXXXXXXXXXXKK 340

Query: 241 XXXXXXXXXXXXXXXXXXXXXXKVEKQNGEAVKLXXXXXXXXXETQSSAPTPLQDKNLKD 300
             XXXXXXXXXXXXXXXXXXXX            X        ETQ SAPTPLQDKNLKD
Sbjct: 341 -EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEESEGKKEETQISAPTPLQDKNLKD 400

Query: 301 PKENGGDLGVKNSTAEEKKIAPT 313
           PKENGGDL VKNST EEKKIAPT
Sbjct: 401 PKENGGDLEVKNSTTEEKKIAPT 406

The following BLAST results are available for this feature:
BLAST of MELO3C006616.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008438814.18.2e-55100.00PREDICTED: DNA ligase 1-like [Cucumis melo][more]
KGN57077.11.2e-1369.66hypothetical protein Csa_3G152040 [Cucumis sativus][more]
XP_004134472.21.2e-1369.66PREDICTED: histone-lysine N-methyltransferase, H3 lysine-79 specific-like [Cucum... [more]
XP_022948567.11.6e-1065.38nucleolar protein 58-like [Cucurbita moschata][more]
XP_023538936.11.6e-1065.38cilia- and flagella-associated protein 251-like [Cucurbita pepo subsp. pepo][more]
BLAST of MELO3C006616.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C006616.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C006616.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AXZ0|A0A1S3AXZ0_CUCME5.5e-55100.00DNA ligase 1-like OS=Cucumis melo OX=3656 GN=LOC103483804 PE=4 SV=1[more]
tr|A0A0A0L8Y3|A0A0A0L8Y3_CUCSA8.0e-1469.66Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G152040 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006616.2.1MELO3C006616.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 253..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..313
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..313

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C006616.2Csa3G152040Cucumber (Chinese Long) v2cumedB223
MELO3C006616.2CSPI03G14010Wild cucumber (PI 183967)cpimedB224
MELO3C006616.2Cucsa.253480Cucumber (Gy14) v1cgymedB432
MELO3C006616.2Lsi05G015110Bottle gourd (USVL1VR-Ls)lsimedB385
MELO3C006616.2Cp4.1LG03g11200Cucurbita pepo (Zucchini)cpemedB693
MELO3C006616.2CsGy3G014140Cucumber (Gy14) v2cgybmedB201
MELO3C006616.2Cla021712Watermelon (97103) v1medwmB447
MELO3C006616.2ClCG05G005880Watermelon (Charleston Gray)medwcgB416
MELO3C006616.2Cla97C05G087320Watermelon (97103) v2medwmbB423
MELO3C006616.2Bhi01G000686Wax gourdmedwgoB530
MELO3C006616.2CsaV3_3G014230Cucumber (Chinese Long) v3cucmedB230
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006616.2Cucumber (Gy14) v2cgybmedB431
MELO3C006616.2Cucumber (Gy14) v2cgybmedB436
MELO3C006616.2Cucumber (Gy14) v1cgymedB299
MELO3C006616.2Cucumber (Gy14) v1cgymedB593
MELO3C006616.2Cucurbita maxima (Rimu)cmamedB273
MELO3C006616.2Cucurbita maxima (Rimu)cmamedB398
MELO3C006616.2Cucurbita maxima (Rimu)cmamedB400
MELO3C006616.2Cucurbita maxima (Rimu)cmamedB863
MELO3C006616.2Cucurbita maxima (Rimu)cmamedB950
MELO3C006616.2Cucurbita moschata (Rifu)cmomedB260
MELO3C006616.2Cucurbita moschata (Rifu)cmomedB385
MELO3C006616.2Cucurbita moschata (Rifu)cmomedB388
MELO3C006616.2Cucurbita moschata (Rifu)cmomedB857
MELO3C006616.2Cucurbita moschata (Rifu)cmomedB940
MELO3C006616.2Cucurbita pepo (Zucchini)cpemedB170
MELO3C006616.2Cucurbita pepo (Zucchini)cpemedB368
MELO3C006616.2Cucurbita pepo (Zucchini)cpemedB371
MELO3C006616.2Cucurbita pepo (Zucchini)cpemedB951
MELO3C006616.2Wild cucumber (PI 183967)cpimedB484
MELO3C006616.2Wild cucumber (PI 183967)cpimedB489
MELO3C006616.2Cucumber (Chinese Long) v2cumedB475
MELO3C006616.2Cucumber (Chinese Long) v2cumedB479
MELO3C006616.2Melon (DHL92) v3.6.1medmedB049
MELO3C006616.2Bottle gourd (USVL1VR-Ls)lsimedB032
MELO3C006616.2Watermelon (Charleston Gray)medwcgB437
MELO3C006616.2Watermelon (97103) v1medwmB474
MELO3C006616.2Silver-seed gourdcarmedB0340
MELO3C006616.2Silver-seed gourdcarmedB0616
MELO3C006616.2Silver-seed gourdcarmedB0840
MELO3C006616.2Cucumber (Chinese Long) v3cucmedB494
MELO3C006616.2Cucumber (Chinese Long) v3cucmedB498
MELO3C006616.2Watermelon (97103) v2medwmbB442
MELO3C006616.2Wax gourdmedwgoB523