Cp4.1LG03g06060 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g06060
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionEukaryotic translation initiation factor 3 subunit G
LocationCp4.1LG03 : 4208854 .. 4210660 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAGGTATATATGTAAATTCAATATTAAGAGTAAATGGTAACATATTGTTCCATTTTCTTTATCTTCTTCCCGTCGAAACCCTAGCTCCCAAAATCTCCCATCTTAAGCCCTAGCCTTCCGATTCTCCATTGTCTGCGCAAATGGTTCAGCAGACAAATCCATCCAAATTGCGTTGGGGGGAGCTAGAAGACGACGATGGGGATCTTGATTTTCTCCTTCCGCCGAAGCAAATTATCGGGCCAGACGAAAATGGATTGAAGAAGATTGTTGAGTATCAGTTTAACGAAGATGGTAATAAGGTCAGAATCACTACCACCACTCGTACACGCAAGCTCGCCCATGCTCGCCTTAGTAAACATGCCGTCGAGCGCCGATCTTGGGCCAAGTTCGGCGATGCTGTCCATGAAGATGTCGGCAGTAGGCTTACTATGGTCTCCACTGAGGAGATTCTTCTCGAGCGCCCTCGTGCTCCTGGTTTGTTTTCAAATATTCTTGATTTTCGTAGTTTTCGGAATTGTGTGCATTTGATTTATGTAGCAACTGTTTAGTTATAATTAGTTATAATATTCTTGATTTTCTATGTTTGAGTGCATAAGAAAATAAGGTTGTTCTTATGGCTAATGTGGTGATTGAGCTATAGAAAACTATGGTACTTGCTTACTAGAAATGTGTAAGCGTATTTGGTTTGTATTTGAAATGGGGTAAGAGAATCACTTTTGTGTGAGGAGTGTGATAGGCTTTGCAGAACTATGCATGTTGTGTATGTTCTTTGGGGAATTACAGGGCTTTCTTGTGAAGTGAGTACCTCAAATTATCATTTGTTTGTACCTCTGTTGGAAAAATGAAACGGATCTTCTTGCCTTGTTACAATAGATTTTCTTTTAAAGAATGAAAACGGTTACAGGTAGCAAACCAGACGAGCCAAAGGTTGCTGGAGATCCCCTAGCTCAACTTGGTAAAGGTGGAGCTGTTCTTATGGTCTGTCGAACTTGTGGTAAAAAGGGTGACCACTGGACCTCAAGGTGTCCTTACAAAGACCTGGCAACACAAGCTGATGGGTTGGATAAGCCTGTTGCACCAGAGGCTGCAACTGCTGCTCCTGGTGCAACGAAGGGAGCGTATGTTCCTCCAGGTATGAGAGCAGGGGCAGAGAGGACTGGAACTGACATGAGACGTAGGAATGATGAGAACTCTGTTCGTGTCACCAACCTTTCGGAGGACACTCGAGAGCCTGACTTGCACGAACTCTTCCGACCATTTGGTGCTGTTAGCCGAGTTTATGTTGCTGTTGATCAAAAGACTGGCATGAGCAGAGGTTTTGGTTTCGTTAATTTTGTGAATCGCGAGGATGCACAAAGATCAATTAACAAGCTCAATGGATATGGTTATGATAATCTCATCCTTAGAGTTGAATGGGCCACTCCAAGGGCGACTTAAAGGTAGGAACTCTCTCTCAAACTGTCTTGTAATTTGCTTACTCCTGTTGTTGGAGTTTTCTTTCCCACATTTTGATAATGCCTTTTTGAGAATCTTTAAGTCCAAAAAATTACTCAATGTGTACTTGATACTATTGTTTTACATGCAGTAGAATTAATCAGATGTCTTTGAGTTTACTTGTTTGATCGGTTGATGCGGGACGGATGGCTATGTTTTTTTTTTTTTTCACATTTTCTTAGCATTGCATATTACAGAAATGACAATATGGTTTTGATATGAACATGTTTTACACTCTTGAGAAGCCATATGCGATGATATGATATGTTCTATCTTTGTTAGTTAGGGGTGAGAAGCTATCCTATTCAGTCT

mRNA sequence

CTAGGTATATATGTAAATTCAATATTAAGAGTAAATGGTAACATATTGTTCCATTTTCTTTATCTTCTTCCCGTCGAAACCCTAGCTCCCAAAATCTCCCATCTTAAGCCCTAGCCTTCCGATTCTCCATTGTCTGCGCAAATGGTTCAGCAGACAAATCCATCCAAATTGCGTTGGGGGGAGCTAGAAGACGACGATGGGGATCTTGATTTTCTCCTTCCGCCGAAGCAAATTATCGGGCCAGACGAAAATGGATTGAAGAAGATTGTTGAGTATCAGTTTAACGAAGATGGTAATAAGGTCAGAATCACTACCACCACTCGTACACGCAAGCTCGCCCATGCTCGCCTTAGTAAACATGCCGTCGAGCGCCGATCTTGGGCCAAGTTCGGCGATGCTGTCCATGAAGATGTCGGCAGTAGGCTTACTATGGTCTCCACTGAGGAGATTCTTCTCGAGCGCCCTCGTGCTCCTGGTAGCAAACCAGACGAGCCAAAGGTTGCTGGAGATCCCCTAGCTCAACTTGGTAAAGGTGGAGCTGTTCTTATGGTCTGTCGAACTTGTGGTAAAAAGGGTGACCACTGGACCTCAAGGTGTCCTTACAAAGACCTGGCAACACAAGCTGATGGGTTGGATAAGCCTGTTGCACCAGAGGCTGCAACTGCTGCTCCTGGTGCAACGAAGGGAGCGTATGTTCCTCCAGGTATGAGAGCAGGGGCAGAGAGGACTGGAACTGACATGAGACGTAGGAATGATGAGAACTCTGTTCGTGTCACCAACCTTTCGGAGGACACTCGAGAGCCTGACTTGCACGAACTCTTCCGACCATTTGGTGCTGTTAGCCGAGTTTATGTTGCTGTTGATCAAAAGACTGGCATGAGCAGAGGTTTTGGTTTCGTTAATTTTGTGAATCGCGAGGATGCACAAAGATCAATTAACAAGCTCAATGGATATGGTTATGATAATCTCATCCTTAGAGTTGAATGGGCCACTCCAAGGGCGACTTAAAGGTAGGAACTCTCTCTCAAACTGTCTTGTAATTTGCTTACTCCTGTTGTTGGAGTTTTCTTTCCCACATTTTGATAATGCCTTTTTGAGAATCTTTAAGTCCAAAAAATTACTCAATGTGTACTTGATACTATTGTTTTACATGCAGTAGAATTAATCAGATGTCTTTGAGTTTACTTGTTTGATCGGTTGATGCGGGACGGATGGCTATGTTTTTTTTTTTTTTCACATTTTCTTAGCATTGCATATTACAGAAATGACAATATGGTTTTGATATGAACATGTTTTACACTCTTGAGAAGCCATATGCGATGATATGATATGTTCTATCTTTGTTAGTTAGGGGTGAGAAGCTATCCTATTCAGTCT

Coding sequence (CDS)

ATGGTTCAGCAGACAAATCCATCCAAATTGCGTTGGGGGGAGCTAGAAGACGACGATGGGGATCTTGATTTTCTCCTTCCGCCGAAGCAAATTATCGGGCCAGACGAAAATGGATTGAAGAAGATTGTTGAGTATCAGTTTAACGAAGATGGTAATAAGGTCAGAATCACTACCACCACTCGTACACGCAAGCTCGCCCATGCTCGCCTTAGTAAACATGCCGTCGAGCGCCGATCTTGGGCCAAGTTCGGCGATGCTGTCCATGAAGATGTCGGCAGTAGGCTTACTATGGTCTCCACTGAGGAGATTCTTCTCGAGCGCCCTCGTGCTCCTGGTAGCAAACCAGACGAGCCAAAGGTTGCTGGAGATCCCCTAGCTCAACTTGGTAAAGGTGGAGCTGTTCTTATGGTCTGTCGAACTTGTGGTAAAAAGGGTGACCACTGGACCTCAAGGTGTCCTTACAAAGACCTGGCAACACAAGCTGATGGGTTGGATAAGCCTGTTGCACCAGAGGCTGCAACTGCTGCTCCTGGTGCAACGAAGGGAGCGTATGTTCCTCCAGGTATGAGAGCAGGGGCAGAGAGGACTGGAACTGACATGAGACGTAGGAATGATGAGAACTCTGTTCGTGTCACCAACCTTTCGGAGGACACTCGAGAGCCTGACTTGCACGAACTCTTCCGACCATTTGGTGCTGTTAGCCGAGTTTATGTTGCTGTTGATCAAAAGACTGGCATGAGCAGAGGTTTTGGTTTCGTTAATTTTGTGAATCGCGAGGATGCACAAAGATCAATTAACAAGCTCAATGGATATGGTTATGATAATCTCATCCTTAGAGTTGAATGGGCCACTCCAAGGGCGACTTAA

Protein sequence

MVQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVRITTTTRTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPDEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLATQADGLDKPVAPEAATAAPGATKGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT
Homology
[Close]
BLAST of Cp4.1LG03g06060 vs. Swiss-Prot
Match: EIF3G_DANRE (Eukaryotic translation initiation factor 3 subunit G OS=Danio rerio GN=eif3g PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.4e-49
Identity = 119/293 (40.61%), Postives = 169/293 (57.68%), Query Frame = 1 

Query: 8   SKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVRITTTTRTRKLAH 67
           SK  W +  +++GD   L  PK+ +   +  +K + EY+ ++DG K +I    RT K+  
Sbjct: 9   SKPSWADQVEEEGDEGSLPSPKETV---KGNIKTVTEYKIDDDGQKFKII---RTFKIET 68

Query: 68  ARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPDEPKVAGDPLAQ 127
            + SK    R++W KFG++ ++  G  +   +  + +     +     +      DP+ +
Sbjct: 69  RKASKAVARRKNWKKFGNSEYDAPGPNVATTTVSDDVFMTFISSKEDLNAQDQDEDPMNK 128

Query: 128 LGKGGAVLMVCRTCGKKGDHWTSRCPYKD--------LATQADGL---DKPVAPEAATAA 187
           L   G  ++ CR C  KGDHWT+RCPYKD        LA Q  GL   +K  A E   A 
Sbjct: 129 LK--GQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQL-GLSTGEKEKAAEPEPAQ 188

Query: 188 PGATK-GAYVPPGMRAGAERTGTDM---RRRNDENSVRVTNLSEDTREPDLHELFRPFGA 247
           P   K G YVPP +R G  R G  M   RR +D  ++RVTNLSEDTRE DL ELFRPFG+
Sbjct: 189 PVQNKTGKYVPPSLRDGGTRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGS 248

Query: 248 VSRVYVAVDQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATP 286
           +SR+Y+A D+ TG S+GF F++F  REDA R+I  ++G+GYD+LIL VEWA P
Sbjct: 249 ISRIYLAKDKNTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKP 290

[Close]
BLAST of Cp4.1LG03g06060 vs. Swiss-Prot
Match: EIF3G_NEMVE (Eukaryotic translation initiation factor 3 subunit G OS=Nematostella vectensis GN=v1g171563 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 9.3e-49
Identity = 120/291 (41.24%), Postives = 168/291 (57.73%), Query Frame = 1 

Query: 9   KLRWGELEDDDGD--LDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVRITTTTRTRKLA 68
           K  W +L D+ G+  L   +PP   +   EN  K + EY+ +++G   +I TT R     
Sbjct: 11  KPSWADLVDEAGETGLTGQIPPSSEVREGEN--KIVTEYKRDDEGKLQKIITTYRVET-- 70

Query: 69  HARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPDEPKVAGDPLA 128
             R++K   +R+ W KFGD+ ++  G   T  +  + +     +    PD  +   DPL 
Sbjct: 71  -RRVAKEIAKRKLWKKFGDSKNDKPGPNKTTTNVCDDVFLILTSNKENPDATEE--DPLK 130

Query: 129 QLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAT-------QADGLDKPVAPEAATAAPGA 188
           +L   G  ++ CR C  KGDHWT++CPYKD          + DG  +P  P +  A P A
Sbjct: 131 KLS--GQKIVQCRIC--KGDHWTTKCPYKDQLEVIHQQLKEDDGSGQPGTPPSEPANPAA 190

Query: 189 --TKGAYVPPGMRAGAERTGTDM--RRRNDENS-VRVTNLSEDTREPDLHELFRPFGAVS 248
             T G YV PG+R GA R G  M  R + DE + +RVTNLSE+TRE DL ELFRP G +S
Sbjct: 191 ASTSGKYVAPGLRDGANRRGETMPSRSQRDETATIRVTNLSEETRESDLQELFRPLGPIS 250

Query: 249 RVYVAVDQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATP 286
           R+++A D+ T  S+GF F+NFV+REDA R+I  L+G+GYD+LIL VEWA P
Sbjct: 251 RIFLAKDKFTNQSKGFAFINFVHREDAARAIEVLSGFGYDHLILNVEWAKP 290

[Close]
BLAST of Cp4.1LG03g06060 vs. Swiss-Prot
Match: EIF3G_XENTR (Eukaryotic translation initiation factor 3 subunit G OS=Xenopus tropicalis GN=eif3g PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.7e-48
Identity = 128/311 (41.16%), Postives = 179/311 (57.56%), Query Frame = 1 

Query: 8   SKLRWGELEDDDG-DLDFLLPPKQIIGPDE------------NG-LKKIVEYQFNEDGNK 67
           SK  W +  +++G D + + PP   +  D             NG +K I EY+ N++G K
Sbjct: 8   SKPSWADQVEEEGIDPEPISPPVTKVQQDPASFVLDTPQEVINGKIKTITEYKLNDEGKK 67

Query: 68  VRITTTTRTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRL-TMVSTEEILLERPRAPG 127
           ++I    RT K+   + SK    R++W KFG++ ++  G  + T   ++++L+       
Sbjct: 68  IKI---VRTFKIETLKASKVVAHRKNWKKFGNSEYDPPGPNVATTTVSDDVLM---TFIT 127

Query: 128 SKPD-EPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKD--------LATQADG 187
           SK D   +   DP+ +L   G  ++ CR C  KGDHWT+RCPYKD        LA Q  G
Sbjct: 128 SKEDLNNQEEEDPMNKL--KGQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQL-G 187

Query: 188 L---DKPVAPEA---ATAAPGATKGAYVPPGMRAGAERTGTDM---RRRNDENSVRVTNL 247
           L   DK  AP A      AP +  G YVPP +R G  R G  M   RR +D  ++RVTNL
Sbjct: 188 LSTGDKEKAPGAEPEPAQAPVSKTGKYVPPSLRDGGSRRGESMQPNRRADDNATIRVTNL 247

Query: 248 SEDTREPDLHELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYD 286
           SEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF F++F  REDA R+I  ++G+GYD
Sbjct: 248 SEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYD 307

[Close]
BLAST of Cp4.1LG03g06060 vs. Swiss-Prot
Match: EI3GA_XENLA (Eukaryotic translation initiation factor 3 subunit G-A OS=Xenopus laevis GN=eif3g-a PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.0e-47
Identity = 130/311 (41.80%), Postives = 176/311 (56.59%), Query Frame = 1 

Query: 8   SKLRWGELEDDDG-DLDFLLPPKQIIGPDE------------NG-LKKIVEYQFNEDGNK 67
           SK  W +  +++G D + L P  QI  PD             NG +K I EY+ N+D   
Sbjct: 8   SKPSWADQVEEEGIDAEPLSP--QIRKPDPVSFVLDTPREVINGNIKTITEYKLNDDDKT 67

Query: 68  VRITTTTRTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRL--TMVSTEEILLERPRAP 127
           V+I    RT K+   + SK   +R++W KFG++ ++  G  +  T VS + ++       
Sbjct: 68  VKIV---RTFKIETVKASKVVAQRKNWKKFGNSEYDPPGPNVATTTVSDDVLMTFITNKE 127

Query: 128 GSKPDEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKD--------LATQADG 187
                E +   DP+ +L   G  ++ CR C  KGDHWT+RCPYKD        LA Q  G
Sbjct: 128 DLNNQEEE---DPMNKLK--GQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQL-G 187

Query: 188 L---DKPVAPEAA---TAAPGATKGAYVPPGMRAGAERTGTDM---RRRNDENSVRVTNL 247
           L   DK  AP A      AP +  G YVPP +R G  R G  M   RR +D  ++RVTNL
Sbjct: 188 LSTGDKEKAPGAEPEPAQAPVSKTGKYVPPSLRDGGSRRGESMQPNRRADDNATIRVTNL 247

Query: 248 SEDTREPDLHELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYD 286
           SEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF F++F  REDA R+I  ++G+GYD
Sbjct: 248 SEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYD 305

[Close]
BLAST of Cp4.1LG03g06060 vs. Swiss-Prot
Match: EI3GB_XENLA (Eukaryotic translation initiation factor 3 subunit G-B OS=Xenopus laevis GN=eif3g-b PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.3e-47
Identity = 122/311 (39.23%), Postives = 172/311 (55.31%), Query Frame = 1 

Query: 8   SKLRWGELEDDDG-DLDFLLP--------------PKQIIGPDENGLKKIVEYQFNEDGN 67
           SK  W +  +++G D++ L P              P+++I      +K I EY+ N+   
Sbjct: 8   SKPSWADQVEEEGIDVEPLSPQIKKQDPASFVLDTPREVIN---GNIKTITEYKLNDKDK 67

Query: 68  KVRITTTTRTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRL--TMVSTEEILLERPRA 127
           K++I    RT K+   + SK    R++W KFG++ ++  G  +  T VS + ++      
Sbjct: 68  KIKIV---RTFKIETLKASKVVAHRKNWKKFGNSEYDPPGPNVATTTVSDDVLMTFITNK 127

Query: 128 PGSKPDEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKD--------LATQ-- 187
                 E +   DP+ +L   G  ++ CR C  KGDHWT+RCPYKD        LA Q  
Sbjct: 128 EDLNNQEEE---DPMNKLK--GQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQLG 187

Query: 188 ---ADGLDKPVAPEAATAAPGATKGAYVPPGMRAGAERTGTDM---RRRNDENSVRVTNL 247
              AD    P A      AP +  G YVPP +R G  R G  M   RR +D  ++RVTNL
Sbjct: 188 LSTADKEKAPGAEPEPAQAPVSKTGKYVPPSLRDGGSRRGESMQPNRRADDNATIRVTNL 247

Query: 248 SEDTREPDLHELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYD 286
           SEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF F++F  REDA R+I  ++G+GYD
Sbjct: 248 SEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYD 305

[Close]
BLAST of Cp4.1LG03g06060 vs. TrEMBL
Match: A0A0A0LCF1_CUCSA (Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus GN=Csa_3G270800 PE=3 SV=1)

HSP 1 Score: 567.4 bits (1461), Expect = 1.0e-158
Identity = 279/288 (96.88%), Postives = 281/288 (97.57%), Query Frame = 1 

Query: 1   MVQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVRITTTT 60
           MVQQTN SKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKV+ITTTT
Sbjct: 1   MVQQTNASKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPDEPKV 120
           RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKP+EPKV
Sbjct: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLATQADGLDKPVAPEAATAAPGAT 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA QADGLDKPVAPE   AAPGAT
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPETTAAAPGAT 180

Query: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVAV 240
           KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDL ELFRPFGAVSRVYVAV
Sbjct: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240

Query: 241 DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 289
           DQK GMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 DQKNGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 288

[Close]
BLAST of Cp4.1LG03g06060 vs. TrEMBL
Match: A0A0A0LPX8_CUCSA (Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus GN=Csa_1G031810 PE=3 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 1.0e-150
Identity = 265/289 (91.70%), Postives = 277/289 (95.85%), Query Frame = 1 

Query: 1   MVQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVRITTTT 60
           M Q  + SKLRWGEL+DDDGDLDFLLPPK+IIGPDENG+KK++EYQFNEDGNKV+ITTTT
Sbjct: 1   MAQAASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGVKKVIEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPDEPKV 120
           RTRKLA+ARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKP+EPKV
Sbjct: 61  RTRKLANARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLATQADGLDKPVAPEAATAAP-GA 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA Q +GLDK  APEAA AAP GA
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKATAPEAAAAAPGGA 180

Query: 181 TKGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVA 240
           TKG YVPPGMRAGA+RTGTDMRRRNDENSVRVTNLSEDTREPDL ELFRPFGAVSRVYVA
Sbjct: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA 240

Query: 241 VDQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 289
           VDQKTGMSRGFGFVNFVNREDAQR+INKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289

[Close]
BLAST of Cp4.1LG03g06060 vs. TrEMBL
Match: A0A0D2RLM6_GOSRA (Eukaryotic translation initiation factor 3 subunit G OS=Gossypium raimondii GN=B456_003G128700 PE=3 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 4.8e-137
Identity = 241/284 (84.86%), Postives = 263/284 (92.61%), Query Frame = 1 

Query: 5   TNPSKLRWGELEDDDG-DLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVRITTTTRTR 64
           T P+KLRWGEL++DDG DLDFLLPPKQ+IGPDENG+KK++EY+FN++GNKV+ITTTTR R
Sbjct: 10  TPPTKLRWGELDEDDGEDLDFLLPPKQVIGPDENGIKKVIEYKFNDEGNKVKITTTTRVR 69

Query: 65  KLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPDEPKVAGD 124
           KLA+ARLSK AVERRSW KFGDAV EDVGSRLTMVSTEEILLERPRAPGSK +E K AGD
Sbjct: 70  KLANARLSKQAVERRSWPKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKAEEQKAAGD 129

Query: 125 PLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLATQADG-LDKPVAPEAATAAPGATKG 184
           PLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA  A+  +DKP  PE ATAA G+ K 
Sbjct: 130 PLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALPAESFVDKPAVPETATAAAGSGKN 189

Query: 185 AYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVAVDQ 244
            YVPPGMRAGA+R+GTDMRRRNDENSVRVTNLSEDTRE DLHELFRPFGAVSRVYVA+DQ
Sbjct: 190 TYVPPGMRAGADRSGTDMRRRNDENSVRVTNLSEDTREADLHELFRPFGAVSRVYVAIDQ 249

Query: 245 KTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPR 287
           KTGMSRGFGFVNFVN++DAQR+INKLNGYGYDNLILRVEWATPR
Sbjct: 250 KTGMSRGFGFVNFVNKDDAQRAINKLNGYGYDNLILRVEWATPR 293

[Close]
BLAST of Cp4.1LG03g06060 vs. TrEMBL
Match: A0A0B0NDY1_GOSAR (Eukaryotic translation initiation factor 3 subunit G OS=Gossypium arboreum GN=F383_07349 PE=3 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 1.4e-136
Identity = 240/282 (85.11%), Postives = 262/282 (92.91%), Query Frame = 1 

Query: 7   PSKLRWGELEDDDG-DLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVRITTTTRTRKL 66
           P+KLRWGEL++DDG DLDFLLPPKQ+IGPDENG+KK++EY+FN++GNKV+ITTTTR RKL
Sbjct: 13  PTKLRWGELDEDDGEDLDFLLPPKQVIGPDENGIKKVIEYKFNDEGNKVKITTTTRVRKL 72

Query: 67  AHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPDEPKVAGDPL 126
           A+ARLSK AVERRSW KFGDAV EDVGSRLTMVSTEEILLERPRAPGSK +EPK AGD L
Sbjct: 73  ANARLSKQAVERRSWPKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKAEEPKAAGDSL 132

Query: 127 AQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLATQADG-LDKPVAPEAATAAPGATKGAY 186
           AQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA  A+  +DKP  PE ATAA G+ K  Y
Sbjct: 133 AQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALPAESFVDKPAVPETATAAAGSGKNTY 192

Query: 187 VPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVAVDQKT 246
           VPPGMRAGA+R+GTDMRRRNDENSVRVTNLSEDTRE DLHELFRPFGAVSRVYVA+DQKT
Sbjct: 193 VPPGMRAGADRSGTDMRRRNDENSVRVTNLSEDTREADLHELFRPFGAVSRVYVAIDQKT 252

Query: 247 GMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPR 287
           GMSRGFGFVNFVN++DAQR+INKLNGYGYDNLILRVEWATPR
Sbjct: 253 GMSRGFGFVNFVNKDDAQRAINKLNGYGYDNLILRVEWATPR 294

[Close]
BLAST of Cp4.1LG03g06060 vs. TrEMBL
Match: A0A067FGY4_CITSI (Eukaryotic translation initiation factor 3 subunit G OS=Citrus sinensis GN=CISIN_1g022742mg PE=3 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 5.3e-136
Identity = 244/289 (84.43%), Postives = 265/289 (91.70%), Query Frame = 1 

Query: 2   VQQTNPS--KLRWGELEDDDG-DLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVRITT 61
           V   NP+  KLRW EL+++DG DLDFLLPPKQ+IGPDENG+KK++EY+FN+DGNKV+ITT
Sbjct: 3   VSTQNPTQPKLRWSELDEEDGEDLDFLLPPKQVIGPDENGVKKVIEYKFNDDGNKVKITT 62

Query: 62  TTRTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPDEP 121
           TTR RKLA+ARLSK A+ERR+WAKFGDAV EDVGSRLTMVSTEEILLERPRAPGSKP+E 
Sbjct: 63  TTRVRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPEET 122

Query: 122 KVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLATQADG-LDKPVAPEAATAAP 181
           K AGD LAQLGKGGAVLMVCRTCGKKGDHWTSRCP+KDLA  A+  +DKP A E A AA 
Sbjct: 123 KAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPAASETAAAAA 182

Query: 182 GATKGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVY 241
           GATKG YVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDL ELFRPFGAVSRVY
Sbjct: 183 GATKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVY 242

Query: 242 VAVDQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPR 287
           VAVDQKTG+SRGFGFVNFVN+EDAQR+INKLNGYGYDNLILRVEWATPR
Sbjct: 243 VAVDQKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 291

[Close]
BLAST of Cp4.1LG03g06060 vs. TAIR10
Match: AT3G11400.2 (AT3G11400.2 eukaryotic translation initiation factor 3G1)

HSP 1 Score: 423.3 bits (1087), Expect = 1.2e-118
Identity = 219/317 (69.09%), Postives = 248/317 (78.23%), Query Frame = 1 

Query: 4   QTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVRITTTTRTR 63
           Q   SK RWGE+++D+ DLDFLLPPKQ+IGPDENGLK  +EY+FN++ NKV+ITT TR R
Sbjct: 6   QQKTSKFRWGEMDEDE-DLDFLLPPKQVIGPDENGLKTTIEYKFNDEENKVKITTRTRVR 65

Query: 64  KLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPG----------- 123
           KLA ARL+K A+ERR+W KFGDA +E+ GS LTMVSTEEILLERPRAPG           
Sbjct: 66  KLASARLNKRAMERRNWPKFGDAANEEAGSHLTMVSTEEILLERPRAPGDQLANHMLASI 125

Query: 124 ----------------SKPDEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKD 183
                           +K DE K  GD L+QLGKGGAVLMVCR C KKGDHWTS+CPYKD
Sbjct: 126 PEYELKCALTFVAANCTKADESKATGDGLSQLGKGGAVLMVCRICHKKGDHWTSKCPYKD 185

Query: 184 LATQADG-LDKPVAPEAAT--AAPGATKGAYVPPGMRAGAERT--GTDMRRRNDENSVRV 243
           LA   D  +DKP   E++T  AAPG  K AYVPP MRAGA+R+  G+DMRRRNDENSVRV
Sbjct: 186 LAAPTDVFIDKPPTGESSTMSAAPGTGKAAYVPPSMRAGADRSAVGSDMRRRNDENSVRV 245

Query: 244 TNLSEDTREPDLHELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRSINKLNGY 289
           TNLSEDTREPDL ELF PFGAV+RVYVA+DQKTG+SRGFGFVNFV+REDAQR+INKLNGY
Sbjct: 246 TNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGY 305

[Close]
BLAST of Cp4.1LG03g06060 vs. TAIR10
Match: AT5G06000.1 (AT5G06000.1 eukaryotic translation initiation factor 3G2)

HSP 1 Score: 383.3 bits (983), Expect = 1.4e-106
Identity = 192/288 (66.67%), Postives = 235/288 (81.60%), Query Frame = 1 

Query: 2   VQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVRITTTTR 61
           +Q+T   KLRWGE+++++GD DFLLPPKQ+I PD+NG+KK++EY+FNE+  KV+ITTTTR
Sbjct: 6   IQKTK--KLRWGEIDEEEGDYDFLLPPKQMISPDQNGVKKVIEYKFNEEDKKVKITTTTR 65

Query: 62  TRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPDEPKVA 121
            +K A   L+K AVERRSW KFGDA HE+  S LTM STE+I+LER RAPGS  ++  V+
Sbjct: 66  VQKRA---LTKQAVERRSWNKFGDAAHEESSSYLTMRSTEDIILERIRAPGSNAEQSTVS 125

Query: 122 GDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLATQADGLDKPVAPEAATAA-PGAT 181
           GD ++QLGK GAVLMVCR C KKGDHWTSRCP KDL +    +D+P+  E +T+   G  
Sbjct: 126 GDSMSQLGKPGAVLMVCRLCQKKGDHWTSRCPQKDLLSL---MDEPLTAETSTSTITGTG 185

Query: 182 KGAYVPPGMRAGAERT--GTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYV 241
           + AYVPP MR GA+R   G+DMR R+DENSVRVTNLSEDTR PDL ELFRPFGAV+R +V
Sbjct: 186 RAAYVPPSMREGADRKAGGSDMRSRHDENSVRVTNLSEDTRGPDLMELFRPFGAVTRCHV 245

Query: 242 AVDQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPR 287
           A+DQKT MSRGFGFV+FV+REDAQR+INKLNGYGYDNLILRVEW+TP+
Sbjct: 246 AIDQKTSMSRGFGFVSFVSREDAQRAINKLNGYGYDNLILRVEWSTPK 285

[Close]
BLAST of Cp4.1LG03g06060 vs. TAIR10
Match: AT3G14100.1 (AT3G14100.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-12
Identity = 38/90 (42.22%), Postives = 55/90 (61.11%), Query Frame = 1 

Query: 202 RRNDENS---VRVTNLSEDTREPDLHELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNR 261
           +R D +S   + V +LS +  +  L++ F  F + S   V  DQKTG SRGFGFV+F N+
Sbjct: 136 QREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQ 195

Query: 262 EDAQRSINKLNGYGYDNLILRVEWATPRAT 289
           +DAQ +IN++NG    +  +R  WAT  AT
Sbjct: 196 QDAQTAINEMNGKWLSSRQIRCNWATKGAT 225

[Close]
BLAST of Cp4.1LG03g06060 vs. TAIR10
Match: AT1G54080.2 (AT1G54080.2 oligouridylate-binding protein 1A)

HSP 1 Score: 67.0 bits (162), Expect = 2.2e-11
Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = 1 

Query: 202 RRNDENS---VRVTNLSEDTREPDLHELFRPFGAVSRVY----VAVDQKTGMSRGFGFVN 261
           +R D +S   + V +LS +  +  L + F  F + S  Y    V  DQKTG SRGFGFV+
Sbjct: 140 QREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTGRSRGFGFVS 199

Query: 262 FVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 289
           F N++DAQ +IN++NG    +  +R  WAT  AT
Sbjct: 200 FRNQQDAQTAINEMNGKWVSSRQIRCNWATKGAT 233

[Close]
BLAST of Cp4.1LG03g06060 vs. TAIR10
Match: AT4G34110.1 (AT4G34110.1 poly(A) binding protein 2)

HSP 1 Score: 62.8 bits (151), Expect = 4.1e-10
Identity = 41/107 (38.32%), Postives = 57/107 (53.27%), Query Frame = 1 

Query: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVAV 240
           K  YV P +R   ER  T    +    +V V NL+E T + DL   F  +G ++   V  
Sbjct: 192 KQVYVGPFLRR-QERDST--ANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMK 251

Query: 241 DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRA 288
           D + G S+GFGFVNF N +DA R++  LNG+ +D+     EW   RA
Sbjct: 252 DGE-GKSKGFGFVNFENADDAARAVESLNGHKFDD----KEWYVGRA 290

[Close]
BLAST of Cp4.1LG03g06060 vs. NCBI nr
Match: gi|659123278|ref|XP_008461580.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis melo])

HSP 1 Score: 568.9 bits (1465), Expect = 4.9e-159
Identity = 279/288 (96.88%), Postives = 282/288 (97.92%), Query Frame = 1 

Query: 1   MVQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVRITTTT 60
           MVQQTN SKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKV+ITTTT
Sbjct: 1   MVQQTNASKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPDEPKV 120
           RTRKLAHARLSKHA+ERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKP+EPKV
Sbjct: 61  RTRKLAHARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLATQADGLDKPVAPEAATAAPGAT 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA QADGLDKPVAPE   AAPGAT
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPETTAAAPGAT 180

Query: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVAV 240
           KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDL ELFRPFGAVSRVYVAV
Sbjct: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240

Query: 241 DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 289
           DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 288

[Close]
BLAST of Cp4.1LG03g06060 vs. NCBI nr
Match: gi|449455799|ref|XP_004145638.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis sativus])

HSP 1 Score: 567.4 bits (1461), Expect = 1.4e-158
Identity = 279/288 (96.88%), Postives = 281/288 (97.57%), Query Frame = 1 

Query: 1   MVQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVRITTTT 60
           MVQQTN SKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKV+ITTTT
Sbjct: 1   MVQQTNASKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPDEPKV 120
           RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKP+EPKV
Sbjct: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLATQADGLDKPVAPEAATAAPGAT 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA QADGLDKPVAPE   AAPGAT
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPETTAAAPGAT 180

Query: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVAV 240
           KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDL ELFRPFGAVSRVYVAV
Sbjct: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240

Query: 241 DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 289
           DQK GMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 DQKNGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 288

[Close]
BLAST of Cp4.1LG03g06060 vs. NCBI nr
Match: gi|449439229|ref|XP_004137389.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis sativus])

HSP 1 Score: 540.8 bits (1392), Expect = 1.4e-150
Identity = 265/289 (91.70%), Postives = 277/289 (95.85%), Query Frame = 1 

Query: 1   MVQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVRITTTT 60
           M Q  + SKLRWGEL+DDDGDLDFLLPPK+IIGPDENG+KK++EYQFNEDGNKV+ITTTT
Sbjct: 1   MAQAASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGVKKVIEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPDEPKV 120
           RTRKLA+ARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKP+EPKV
Sbjct: 61  RTRKLANARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLATQADGLDKPVAPEAATAAP-GA 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA Q +GLDK  APEAA AAP GA
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKATAPEAAAAAPGGA 180

Query: 181 TKGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVA 240
           TKG YVPPGMRAGA+RTGTDMRRRNDENSVRVTNLSEDTREPDL ELFRPFGAVSRVYVA
Sbjct: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA 240

Query: 241 VDQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 289
           VDQKTGMSRGFGFVNFVNREDAQR+INKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289

[Close]
BLAST of Cp4.1LG03g06060 vs. NCBI nr
Match: gi|659066295|ref|XP_008437366.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis melo])

HSP 1 Score: 536.6 bits (1381), Expect = 2.7e-149
Identity = 264/289 (91.35%), Postives = 275/289 (95.16%), Query Frame = 1 

Query: 1   MVQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVRITTTT 60
           M Q  + SKLRWGEL+DDDGDLDFLLPPK+IIGPDENG+KKI+EYQFNEDGNKV+ITTTT
Sbjct: 1   MAQAASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGVKKIIEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPDEPKV 120
           RTRKLA+ARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKP+EPKV
Sbjct: 61  RTRKLANARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLATQADGLDKPVAPEAATAAP-GA 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA Q +GLDK   PEAA AAP GA
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKATTPEAAAAAPGGA 180

Query: 181 TKGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVA 240
           TKG YVPPGMRAGA+RTGTDMRRRNDENSVRVTNLSEDTREPDL ELFR FGAVSRVYVA
Sbjct: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRSFGAVSRVYVA 240

Query: 241 VDQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 289
           VDQKTGMSRGFGFVNFVNREDAQR+INKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289

[Close]
BLAST of Cp4.1LG03g06060 vs. NCBI nr
Match: gi|823142964|ref|XP_012471280.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Gossypium raimondii])

HSP 1 Score: 495.4 bits (1274), Expect = 6.9e-137
Identity = 241/284 (84.86%), Postives = 263/284 (92.61%), Query Frame = 1 

Query: 5   TNPSKLRWGELEDDDG-DLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVRITTTTRTR 64
           T P+KLRWGEL++DDG DLDFLLPPKQ+IGPDENG+KK++EY+FN++GNKV+ITTTTR R
Sbjct: 10  TPPTKLRWGELDEDDGEDLDFLLPPKQVIGPDENGIKKVIEYKFNDEGNKVKITTTTRVR 69

Query: 65  KLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPDEPKVAGD 124
           KLA+ARLSK AVERRSW KFGDAV EDVGSRLTMVSTEEILLERPRAPGSK +E K AGD
Sbjct: 70  KLANARLSKQAVERRSWPKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKAEEQKAAGD 129

Query: 125 PLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLATQADG-LDKPVAPEAATAAPGATKG 184
           PLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA  A+  +DKP  PE ATAA G+ K 
Sbjct: 130 PLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALPAESFVDKPAVPETATAAAGSGKN 189

Query: 185 AYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVAVDQ 244
            YVPPGMRAGA+R+GTDMRRRNDENSVRVTNLSEDTRE DLHELFRPFGAVSRVYVA+DQ
Sbjct: 190 TYVPPGMRAGADRSGTDMRRRNDENSVRVTNLSEDTREADLHELFRPFGAVSRVYVAIDQ 249

Query: 245 KTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPR 287
           KTGMSRGFGFVNFVN++DAQR+INKLNGYGYDNLILRVEWATPR
Sbjct: 250 KTGMSRGFGFVNFVNKDDAQRAINKLNGYGYDNLILRVEWATPR 293

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g06060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EIF3G_DANRE1.4e-4940.61Eukaryotic translation initiation factor 3 subunit G OS=Danio rerio GN=eif3g PE=... [more]
EIF3G_NEMVE9.3e-4941.24Eukaryotic translation initiation factor 3 subunit G OS=Nematostella vectensis G... [more]
EIF3G_XENTR2.7e-4841.16Eukaryotic translation initiation factor 3 subunit G OS=Xenopus tropicalis GN=ei... [more]
EI3GA_XENLA1.0e-4741.80Eukaryotic translation initiation factor 3 subunit G-A OS=Xenopus laevis GN=eif3... [more]
EI3GB_XENLA1.3e-4739.23Eukaryotic translation initiation factor 3 subunit G-B OS=Xenopus laevis GN=eif3... [more]
BLAST of Cp4.1LG03g06060 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCF1_CUCSA1.0e-15896.88Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus GN=Csa_3... [more]
A0A0A0LPX8_CUCSA1.0e-15091.70Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus GN=Csa_1... [more]
A0A0D2RLM6_GOSRA4.8e-13784.86Eukaryotic translation initiation factor 3 subunit G OS=Gossypium raimondii GN=B... [more]
A0A0B0NDY1_GOSAR1.4e-13685.11Eukaryotic translation initiation factor 3 subunit G OS=Gossypium arboreum GN=F3... [more]
A0A067FGY4_CITSI5.3e-13684.43Eukaryotic translation initiation factor 3 subunit G OS=Citrus sinensis GN=CISIN... [more]
BLAST of Cp4.1LG03g06060 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G11400.21.2e-11869.09 eukaryotic translation initiation factor 3G1[more]
AT5G06000.11.4e-10666.67 eukaryotic translation initiation factor 3G2[more]
AT3G14100.11.9e-1242.22 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT1G54080.22.2e-1141.49 oligouridylate-binding protein 1A[more]
AT4G34110.14.1e-1038.32 poly(A) binding protein 2[more]
BLAST of Cp4.1LG03g06060 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659123278|ref|XP_008461580.1|4.9e-15996.88PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis me... [more]
gi|449455799|ref|XP_004145638.1|1.4e-15896.88PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis sa... [more]
gi|449439229|ref|XP_004137389.1|1.4e-15091.70PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis sa... [more]
gi|659066295|ref|XP_008437366.1|2.7e-14991.35PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis me... [more]
gi|823142964|ref|XP_012471280.1|6.9e-13784.86PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Gossypium ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR024675eIF3g_N
IPR017334eIF3_g
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001731 formation of translation preinitiation complex
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0001732 formation of cytoplasmic translation initiation complex
cellular_component GO:0016282 eukaryotic 43S preinitiation complex
cellular_component GO:0033290 eukaryotic 48S preinitiation complex
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
cellular_component GO:0005840 ribosome
cellular_component GO:0005737 cytoplasm
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g06060.1Cp4.1LG03g06060.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 209..275
score: 5.6
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 208..281
score: 8.8
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 207..285
score: 18
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 174..286
score: 1.3
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 205..286
score: 4.7
IPR017334Eukaryotic translation initiation factor 3 subunit GHAMAPMF_03006eIF3gcoord: 9..287
score: 28
IPR017334Eukaryotic translation initiation factor 3 subunit GPIRPIRSF037949Transl_init_eIF-3_RNA-bindcoord: 1..288
score: 3.6
IPR017334Eukaryotic translation initiation factor 3 subunit GPANTHERPTHR10352EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Gcoord: 1..288
score: 7.9E
IPR024675Eukaryotic translation initiation factor 3 subunit G, N-terminalPFAMPF12353eIF3gcoord: 31..157
score: 1.1