Carg22278 (gene) Silver-seed gourd

Overview
NameCarg22278
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionEukaryotic translation initiation factor 3 subunit G
LocationCucurbita_argyrosperma_scaffold_164 : 143875 .. 145495 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCATTTTCTTTATCTCCTTCCCGTCGAAACCCTAGCCCCCAAAATCTCCCATCTGAAGCCCTAGCCTTCCGATTCTCCATTGGCTGCGCAAATGGTTCAGCAGACAAATCCATCCAAATTGCGTTGGGGGGAGCTAGAAGACGACGATGGGGATCTTGATTTTCTCCTTCCGCCGAAGCAAATCATCGGGCCAGACGAAAATGGATTGAAGAAAATTGTCGAGTATCAGTTTAACGAAGATGGTAATAAGGTCAAAATCACTACCACCACTCGTACACGCAAGCTCGCCCATGCTCGCCTTAGTAAACATGCCGTCGAGCGCCGATCTTGGGCCAAGTTCGGCGATGCTGTCCATGAAGATGTCGGCAGTAGGCTTACTATGGTCTCCACTGAGGAGATTCTTCTCGAGCGCCCTCGTGCTCCTGGTTTGTTTTCAAATATTCTTGATTTTCGTAGTTTTCGGAATTGTGTGCATTTGATTTATGTAGCAACTGTTTAGTTATAATTAGTTATAATATTCTTGATTTTCTATGTTTGAGTGCATAAGAAAATAAGGTTGTTCTTATGGCTAATGTTGTGATTGAGCTATAGAAAACTATGGTACTTGTTTACTAGAAATGTGTAAGCGTATTTGGTTTGTATTTGAAATGGGTAAGAGAATCACTTTTGTATGAGGAGTGTGATAGGCTTTGCAGAACTATGCATGTGGTGTATGTTCTTTGGGGAATTACAGGGCTTTCTTGTGAAGTGAGTACCTCAAATTATCATTTGTTTGTACCTTTGTTGGAAAAATGAAACGGATCTTCTTGCCTTGTTACAATAGATTTTCTTTTAAAGAATGAAAACGGTTACAGGTAGCAAACCAGAGGAGCCAAAGGTTGCTGGAGATCCCCTAGCTCAACTTGGTAAAGGTGGAGCTGTTCTTATGGTCTGTCGAACTTGTGGTAAAAAGGGTGACCACTGGACCTCAAGGTGTCCTTACAAAGACCTGGCACCACAAGCGGATGGGTTGGACAAGCCTGTTGCACCAGAGGCTGCAACTGCTGCTCCTGGTGCAACGAAGGGAGCGTATGTTCCTCCAGGTATGAGAGCAGGGGCAGAGAGGACTGGAACTGACATGAGACGTAGGAATGATGAAAACTCTGTTCGTGTCACCAACCTTTCGGAGGACACTCGAGAGCCTGACTTGCACGAACTCTTCCGACCATTTGGTGCTGTTAGCCGAGTTTATGTTGCTGTTGATCAAAAGACTGGCATGAGCAGAGGTTTTGGTTTCGTAAATTTTGTGAATCGCGAGGATGCACAAAGATCAATTAACAAGCTCAATGGATATGGTTATGATAATCTCATCCTTAGAGTTGAATGGGCCACTCCAAGGGCGACTTAAAGGTAGGAACTCTCTCTCAAACTGTCTTGTAATTTGCTTACTCCTGTTGGTGGAGTTTTCTTTCCCACATTTTGATCATGCCTTTTTGAGACTCTTTAAGTCCAAAAAATTACTCAATGTGTACTTGATAATATTGTTTTACATGCAGTAGAATTAATCAGATGTCTTTTAGTTTACTTGTTCGATCGGTTGAAGCGGGGACGAATGGCTATGTTTTTTTTTTTTTTTTCACA

mRNA sequence

TCCATTTTCTTTATCTCCTTCCCGTCGAAACCCTAGCCCCCAAAATCTCCCATCTGAAGCCCTAGCCTTCCGATTCTCCATTGGCTGCGCAAATGGTTCAGCAGACAAATCCATCCAAATTGCGTTGGGGGGAGCTAGAAGACGACGATGGGGATCTTGATTTTCTCCTTCCGCCGAAGCAAATCATCGGGCCAGACGAAAATGGATTGAAGAAAATTGTCGAGTATCAGTTTAACGAAGATGGTAATAAGGTCAAAATCACTACCACCACTCGTACACGCAAGCTCGCCCATGCTCGCCTTAGTAAACATGCCGTCGAGCGCCGATCTTGGGCCAAGTTCGGCGATGCTGTCCATGAAGATGTCGGCAGTAGGCTTACTATGGTCTCCACTGAGGAGATTCTTCTCGAGCGCCCTCGTGCTCCTGGTAGCAAACCAGAGGAGCCAAAGGTTGCTGGAGATCCCCTAGCTCAACTTGGTAAAGGTGGAGCTGTTCTTATGGTCTGTCGAACTTGTGGTAAAAAGGGTGACCACTGGACCTCAAGGTGTCCTTACAAAGACCTGGCACCACAAGCGGATGGGTTGGACAAGCCTGTTGCACCAGAGGCTGCAACTGCTGCTCCTGGTGCAACGAAGGGAGCGTATGTTCCTCCAGGTATGAGAGCAGGGGCAGAGAGGACTGGAACTGACATGAGACGTAGGAATGATGAAAACTCTGTTCGTGTCACCAACCTTTCGGAGGACACTCGAGAGCCTGACTTGCACGAACTCTTCCGACCATTTGGTGCTGTTAGCCGAGTTTATGTTGCTGTTGATCAAAAGACTGGCATGAGCAGAGGTTTTGGTTTCGTAAATTTTGTGAATCGCGAGGATGCACAAAGATCAATTAACAAGCTCAATGGATATGGTTATGATAATCTCATCCTTAGAGTTGAATGGGCCACTCCAAGGGCGACTTAAAGGTAGGAACTCTCTCTCAAACTGTCTTGTAATTTGCTTACTCCTGTTGGTGGAGTTTTCTTTCCCACATTTTGATCATGCCTTTTTGAGACTCTTTAAGTCCAAAAAATTACTCAATGTGTACTTGATAATATTGTTTTACATGCAGTAGAATTAATCAGATGTCTTTTAGTTTACTTGTTCGATCGGTTGAAGCGGGGACGAATGGCTATGTTTTTTTTTTTTTTTTCACA

Coding sequence (CDS)

ATGGTTCAGCAGACAAATCCATCCAAATTGCGTTGGGGGGAGCTAGAAGACGACGATGGGGATCTTGATTTTCTCCTTCCGCCGAAGCAAATCATCGGGCCAGACGAAAATGGATTGAAGAAAATTGTCGAGTATCAGTTTAACGAAGATGGTAATAAGGTCAAAATCACTACCACCACTCGTACACGCAAGCTCGCCCATGCTCGCCTTAGTAAACATGCCGTCGAGCGCCGATCTTGGGCCAAGTTCGGCGATGCTGTCCATGAAGATGTCGGCAGTAGGCTTACTATGGTCTCCACTGAGGAGATTCTTCTCGAGCGCCCTCGTGCTCCTGGTAGCAAACCAGAGGAGCCAAAGGTTGCTGGAGATCCCCTAGCTCAACTTGGTAAAGGTGGAGCTGTTCTTATGGTCTGTCGAACTTGTGGTAAAAAGGGTGACCACTGGACCTCAAGGTGTCCTTACAAAGACCTGGCACCACAAGCGGATGGGTTGGACAAGCCTGTTGCACCAGAGGCTGCAACTGCTGCTCCTGGTGCAACGAAGGGAGCGTATGTTCCTCCAGGTATGAGAGCAGGGGCAGAGAGGACTGGAACTGACATGAGACGTAGGAATGATGAAAACTCTGTTCGTGTCACCAACCTTTCGGAGGACACTCGAGAGCCTGACTTGCACGAACTCTTCCGACCATTTGGTGCTGTTAGCCGAGTTTATGTTGCTGTTGATCAAAAGACTGGCATGAGCAGAGGTTTTGGTTTCGTAAATTTTGTGAATCGCGAGGATGCACAAAGATCAATTAACAAGCTCAATGGATATGGTTATGATAATCTCATCCTTAGAGTTGAATGGGCCACTCCAAGGGCGACTTAA

Protein sequence

MVQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTTRTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPEAATAAPGATKGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT
Homology
[Close]
BLAST of Carg22278 vs. NCBI nr
Match: XP_022935522.1 (eukaryotic translation initiation factor 3 subunit G-like [Cucurbita moschata])

HSP 1 Score: 586.6 bits (1511), Expect = 4.5e-164
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0 

Query: 1   MVQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60
           MVQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT
Sbjct: 1   MVQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPEAATAAPGAT 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPEAATAAPGAT
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPEAATAAPGAT 180

Query: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVAV 240
           KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVAV
Sbjct: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVAV 240

Query: 241 DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 289
           DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 288

[Close]
BLAST of Carg22278 vs. NCBI nr
Match: XP_023528981.1 (eukaryotic translation initiation factor 3 subunit G-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 581.3 bits (1497), Expect = 1.9e-162
Identity = 285/288 (98.96%), Postives = 287/288 (99.65%), Query Frame = 0 

Query: 1   MVQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60
           MVQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKV+ITTTT
Sbjct: 1   MVQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVRITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKP+EPKV
Sbjct: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPDEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPEAATAAPGAT 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA QADGLDKPVAPEAATAAPGAT
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLATQADGLDKPVAPEAATAAPGAT 180

Query: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVAV 240
           KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVAV
Sbjct: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVAV 240

Query: 241 DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 289
           DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 288

[Close]
BLAST of Carg22278 vs. NCBI nr
Match: XP_022983539.1 (eukaryotic translation initiation factor 3 subunit G-like [Cucurbita maxima])

HSP 1 Score: 578.2 bits (1489), Expect = 1.6e-161
Identity = 284/288 (98.61%), Postives = 285/288 (98.96%), Query Frame = 0 

Query: 1   MVQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60
           MVQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT
Sbjct: 1   MVQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPEAATAAPGAT 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPEA TAAPGAT
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPEAGTAAPGAT 180

Query: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVAV 240
           KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDL ELFRPFGAVSRVYVA+
Sbjct: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLQELFRPFGAVSRVYVAI 240

Query: 241 DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 289
           DQKT MSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 DQKTCMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 288

[Close]
BLAST of Carg22278 vs. NCBI nr
Match: XP_008461580.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis melo])

HSP 1 Score: 573.9 bits (1478), Expect = 3.0e-160
Identity = 282/288 (97.92%), Postives = 283/288 (98.26%), Query Frame = 0 

Query: 1   MVQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60
           MVQQTN SKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT
Sbjct: 1   MVQQTNASKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLAHARLSKHA+ERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLAHARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPEAATAAPGAT 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPE   AAPGAT
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPETTAAAPGAT 180

Query: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVAV 240
           KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDL ELFRPFGAVSRVYVAV
Sbjct: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240

Query: 241 DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 289
           DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 288

[Close]
BLAST of Carg22278 vs. NCBI nr
Match: XP_004145638.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis sativus] >KGN57736.1 hypothetical protein Csa_3G270800 [Cucumis sativus])

HSP 1 Score: 572.4 bits (1474), Expect = 8.7e-160
Identity = 282/288 (97.92%), Postives = 282/288 (97.92%), Query Frame = 0 

Query: 1   MVQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60
           MVQQTN SKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT
Sbjct: 1   MVQQTNASKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPEAATAAPGAT 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPE   AAPGAT
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPETTAAAPGAT 180

Query: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVAV 240
           KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDL ELFRPFGAVSRVYVAV
Sbjct: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240

Query: 241 DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 289
           DQK GMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 DQKNGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 288

[Close]
BLAST of Carg22278 vs. TAIR10
Match: AT3G11400.2 (eukaryotic translation initiation factor 3G1)

HSP 1 Score: 422.2 bits (1084), Expect = 2.6e-118
Identity = 220/317 (69.40%), Postives = 247/317 (77.92%), Query Frame = 0 

Query: 4   QTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTTRTR 63
           Q   SK RWGE+ D+D DLDFLLPPKQ+IGPDENGLK  +EY+FN++ NKVKITT TR R
Sbjct: 6   QQKTSKFRWGEM-DEDEDLDFLLPPKQVIGPDENGLKTTIEYKFNDEENKVKITTRTRVR 65

Query: 64  KLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPG----------- 123
           KLA ARL+K A+ERR+W KFGDA +E+ GS LTMVSTEEILLERPRAPG           
Sbjct: 66  KLASARLNKRAMERRNWPKFGDAANEEAGSHLTMVSTEEILLERPRAPGDQLANHMLASI 125

Query: 124 ----------------SKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKD 183
                           +K +E K  GD L+QLGKGGAVLMVCR C KKGDHWTS+CPYKD
Sbjct: 126 PEYELKCALTFVAANCTKADESKATGDGLSQLGKGGAVLMVCRICHKKGDHWTSKCPYKD 185

Query: 184 LAPQAD-GLDKPVAPEAAT--AAPGATKGAYVPPGMRAGAERT--GTDMRRRNDENSVRV 243
           LA   D  +DKP   E++T  AAPG  K AYVPP MRAGA+R+  G+DMRRRNDENSVRV
Sbjct: 186 LAAPTDVFIDKPPTGESSTMSAAPGTGKAAYVPPSMRAGADRSAVGSDMRRRNDENSVRV 245

Query: 244 TNLSEDTREPDLHELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRSINKLNGY 289
           TNLSEDTREPDL ELF PFGAV+RVYVA+DQKTG+SRGFGFVNFV+REDAQR+INKLNGY
Sbjct: 246 TNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGY 305

[Close]
BLAST of Carg22278 vs. TAIR10
Match: AT5G06000.1 (eukaryotic translation initiation factor 3G2)

HSP 1 Score: 384.0 bits (985), Expect = 8.0e-107
Identity = 194/288 (67.36%), Postives = 234/288 (81.25%), Query Frame = 0 

Query: 2   VQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTTR 61
           +Q+T   KLRWGE+++++GD DFLLPPKQ+I PD+NG+KK++EY+FNE+  KVKITTTTR
Sbjct: 6   IQKT--KKLRWGEIDEEEGDYDFLLPPKQMISPDQNGVKKVIEYKFNEEDKKVKITTTTR 65

Query: 62  TRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVA 121
            +K A   L+K AVERRSW KFGDA HE+  S LTM STE+I+LER RAPGS  E+  V+
Sbjct: 66  VQKRA---LTKQAVERRSWNKFGDAAHEESSSYLTMRSTEDIILERIRAPGSNAEQSTVS 125

Query: 122 GDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPEAATAA-PGAT 181
           GD ++QLGK GAVLMVCR C KKGDHWTSRCP KDL      +D+P+  E +T+   G  
Sbjct: 126 GDSMSQLGKPGAVLMVCRLCQKKGDHWTSRCPQKDLLSL---MDEPLTAETSTSTITGTG 185

Query: 182 KGAYVPPGMRAGAERT--GTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYV 241
           + AYVPP MR GA+R   G+DMR R+DENSVRVTNLSEDTR PDL ELFRPFGAV+R +V
Sbjct: 186 RAAYVPPSMREGADRKAGGSDMRSRHDENSVRVTNLSEDTRGPDLMELFRPFGAVTRCHV 245

Query: 242 AVDQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPR 287
           A+DQKT MSRGFGFV+FV+REDAQR+INKLNGYGYDNLILRVEW+TP+
Sbjct: 246 AIDQKTSMSRGFGFVSFVSREDAQRAINKLNGYGYDNLILRVEWSTPK 285

[Close]
BLAST of Carg22278 vs. TAIR10
Match: AT3G14100.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-12
Identity = 38/90 (42.22%), Postives = 55/90 (61.11%), Query Frame = 0 

Query: 202 RRNDENS---VRVTNLSEDTREPDLHELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNR 261
           +R D +S   + V +LS +  +  L++ F  F + S   V  DQKTG SRGFGFV+F N+
Sbjct: 136 QREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQ 195

Query: 262 EDAQRSINKLNGYGYDNLILRVEWATPRAT 289
           +DAQ +IN++NG    +  +R  WAT  AT
Sbjct: 196 QDAQTAINEMNGKWLSSRQIRCNWATKGAT 225

[Close]
BLAST of Carg22278 vs. TAIR10
Match: AT1G54080.2 (oligouridylate-binding protein 1A)

HSP 1 Score: 67.0 bits (162), Expect = 2.2e-11
Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = 0 

Query: 202 RRNDENS---VRVTNLSEDTREPDLHELFRPFGAVSRVY----VAVDQKTGMSRGFGFVN 261
           +R D +S   + V +LS +  +  L + F  F + S  Y    V  DQKTG SRGFGFV+
Sbjct: 140 QREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTGRSRGFGFVS 199

Query: 262 FVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 289
           F N++DAQ +IN++NG    +  +R  WAT  AT
Sbjct: 200 FRNQQDAQTAINEMNGKWVSSRQIRCNWATKGAT 233

[Close]
BLAST of Carg22278 vs. TAIR10
Match: AT1G17370.1 (oligouridylate binding protein 1B)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-09
Identity = 35/90 (38.89%), Postives = 51/90 (56.67%), Query Frame = 0 

Query: 202 RRNDENS---VRVTNLSEDTREPDLHELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNR 261
           +R D +S   + V +LS +  +  L   F  +   S   V  DQKTG SRGFGFV+F N+
Sbjct: 131 QREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQ 190

Query: 262 EDAQRSINKLNGYGYDNLILRVEWATPRAT 289
           +DAQ +I+++ G    +  +R  WAT  AT
Sbjct: 191 QDAQTAIDEITGKWLGSRQIRCNWATKGAT 220

[Close]
BLAST of Carg22278 vs. Swiss-Prot
Match: sp|Q6DRC4|EIF3G_DANRE (Eukaryotic translation initiation factor 3 subunit G OS=Danio rerio OX=7955 GN=eif3g PE=1 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 6.5e-50
Identity = 118/292 (40.41%), Postives = 166/292 (56.85%), Query Frame = 0 

Query: 8   SKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTTRTRKLAH 67
           SK  W +  +++GD   L  PK+ +   +  +K + EY+ ++DG K KI    RT K+  
Sbjct: 9   SKPSWADQVEEEGDEGSLPSPKETV---KGNIKTVTEYKIDDDGQKFKI---IRTFKIET 68

Query: 68  ARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQ 127
            + SK    R++W KFG++ ++  G  +   +  + +     +            DP+ +
Sbjct: 69  RKASKAVARRKNWKKFGNSEYDAPGPNVATTTVSDDVFMTFISSKEDLNAQDQDEDPMNK 128

Query: 128 LGKGGAVLMVCRTCGKKGDHWTSRCPYKD-LAPQADGL---------DKPVAPEAATAAP 187
           L   G  ++ CR C  KGDHWT+RCPYKD L P    L         +K  A E   A P
Sbjct: 129 L--KGQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKAAEPEPAQP 188

Query: 188 GATK-GAYVPPGMRAGAERTGTDM---RRRNDENSVRVTNLSEDTREPDLHELFRPFGAV 247
              K G YVPP +R G  R G  M   RR +D  ++RVTNLSEDTRE DL ELFRPFG++
Sbjct: 189 VQNKTGKYVPPSLRDGGTRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSI 248

Query: 248 SRVYVAVDQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATP 286
           SR+Y+A D+ TG S+GF F++F  REDA R+I  ++G+GYD+LIL VEWA P
Sbjct: 249 SRIYLAKDKNTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKP 290

[Close]
BLAST of Carg22278 vs. Swiss-Prot
Match: sp|A7SKE9|EIF3G_NEMVE (Eukaryotic translation initiation factor 3 subunit G OS=Nematostella vectensis OX=45351 GN=v1g171563 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 5.5e-49
Identity = 121/295 (41.02%), Postives = 168/295 (56.95%), Query Frame = 0 

Query: 9   KLRWGELEDDDGD--LDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTTRTRKLA 68
           K  W +L D+ G+  L   +PP   +   EN  K + EY+ +++G   KI TT R     
Sbjct: 11  KPSWADLVDEAGETGLTGQIPPSSEVREGEN--KIVTEYKRDDEGKLQKIITTYRVET-- 70

Query: 69  HARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEE----ILLERPRAPGSKPEEPKVAG 128
             R++K   +R+ W KFGD+ ++  G   T  +  +    IL      P +  E      
Sbjct: 71  -RRVAKEIAKRKLWKKFGDSKNDKPGPNKTTTNVCDDVFLILTSNKENPDATEE------ 130

Query: 129 DPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKD-------LAPQADGLDKPVAP--EAA 188
           DPL +L   G  ++ CR C  KGDHWT++CPYKD          + DG  +P  P  E A
Sbjct: 131 DPLKKL--SGQKIVQCRIC--KGDHWTTKCPYKDQLEVIHQQLKEDDGSGQPGTPPSEPA 190

Query: 189 TAAPGATKGAYVPPGMRAGAERTGTDM---RRRNDENSVRVTNLSEDTREPDLHELFRPF 248
             A  +T G YV PG+R GA R G  M    +R++  ++RVTNLSE+TRE DL ELFRP 
Sbjct: 191 NPAAASTSGKYVAPGLRDGANRRGETMPSRSQRDETATIRVTNLSEETRESDLQELFRPL 250

Query: 249 GAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATP 286
           G +SR+++A D+ T  S+GF F+NFV+REDA R+I  L+G+GYD+LIL VEWA P
Sbjct: 251 GPISRIFLAKDKFTNQSKGFAFINFVHREDAARAIEVLSGFGYDHLILNVEWAKP 290

[Close]
BLAST of Carg22278 vs. Swiss-Prot
Match: sp|Q28CY2|EIF3G_XENTR (Eukaryotic translation initiation factor 3 subunit G OS=Xenopus tropicalis OX=8364 GN=eif3g PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 9.4e-49
Identity = 126/310 (40.65%), Postives = 175/310 (56.45%), Query Frame = 0 

Query: 8   SKLRWGELEDDDG-DLDFLLPPKQIIGPDE------------NG-LKKIVEYQFNEDGNK 67
           SK  W +  +++G D + + PP   +  D             NG +K I EY+ N++G K
Sbjct: 8   SKPSWADQVEEEGIDPEPISPPVTKVQQDPASFVLDTPQEVINGKIKTITEYKLNDEGKK 67

Query: 68  VKITTTTRTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRL--TMVSTEEILLERPRAP 127
           +KI    RT K+   + SK    R++W KFG++ ++  G  +  T VS + ++       
Sbjct: 68  IKI---VRTFKIETLKASKVVAHRKNWKKFGNSEYDPPGPNVATTTVSDDVLMTFITSKE 127

Query: 128 GSKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKD-LAPQADGL------ 187
               +E +   DP+ +L   G  ++ CR C  KGDHWT+RCPYKD L P    L      
Sbjct: 128 DLNNQEEE---DPMNKL--KGQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQLGL 187

Query: 188 ---DKPVAPEA---ATAAPGATKGAYVPPGMRAGAERTGTDM---RRRNDENSVRVTNLS 247
              DK  AP A      AP +  G YVPP +R G  R G  M   RR +D  ++RVTNLS
Sbjct: 188 STGDKEKAPGAEPEPAQAPVSKTGKYVPPSLRDGGSRRGESMQPNRRADDNATIRVTNLS 247

Query: 248 EDTREPDLHELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDN 286
           EDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF F++F  REDA R+I  ++G+GYD+
Sbjct: 248 EDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDH 307

[Close]
BLAST of Carg22278 vs. Swiss-Prot
Match: sp|Q6DJI8|EI3GA_XENLA (Eukaryotic translation initiation factor 3 subunit G-A OS=Xenopus laevis OX=8355 GN=eif3g-a PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.1e-48
Identity = 127/310 (40.97%), Postives = 173/310 (55.81%), Query Frame = 0 

Query: 8   SKLRWGELEDDDG-DLDFLLPPKQIIGPD-------------ENGLKKIVEYQFNEDGNK 67
           SK  W +  +++G D + L P  QI  PD                +K I EY+ N+D   
Sbjct: 8   SKPSWADQVEEEGIDAEPLSP--QIRKPDPVSFVLDTPREVINGNIKTITEYKLNDDDKT 67

Query: 68  VKITTTTRTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRL--TMVSTEEILLERPRAP 127
           VKI    RT K+   + SK   +R++W KFG++ ++  G  +  T VS + ++       
Sbjct: 68  VKI---VRTFKIETVKASKVVAQRKNWKKFGNSEYDPPGPNVATTTVSDDVLMTFITNKE 127

Query: 128 GSKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKD-LAPQADGL------ 187
               +E +   DP+ +L   G  ++ CR C  KGDHWT+RCPYKD L P    L      
Sbjct: 128 DLNNQEEE---DPMNKL--KGQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQLGL 187

Query: 188 ---DKPVAPEA---ATAAPGATKGAYVPPGMRAGAERTGTDM---RRRNDENSVRVTNLS 247
              DK  AP A      AP +  G YVPP +R G  R G  M   RR +D  ++RVTNLS
Sbjct: 188 STGDKEKAPGAEPEPAQAPVSKTGKYVPPSLRDGGSRRGESMQPNRRADDNATIRVTNLS 247

Query: 248 EDTREPDLHELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDN 286
           EDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF F++F  REDA R+I  ++G+GYD+
Sbjct: 248 EDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDH 305

[Close]
BLAST of Carg22278 vs. Swiss-Prot
Match: sp|Q641B2|EI3GB_XENLA (Eukaryotic translation initiation factor 3 subunit G-B OS=Xenopus laevis OX=8355 GN=eif3g-b PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 4.7e-48
Identity = 124/311 (39.87%), Postives = 174/311 (55.95%), Query Frame = 0 

Query: 8   SKLRWGELEDDDG-DLDFLLP--------------PKQIIGPDENGLKKIVEYQFNEDGN 67
           SK  W +  +++G D++ L P              P+++I      +K I EY+ N+   
Sbjct: 8   SKPSWADQVEEEGIDVEPLSPQIKKQDPASFVLDTPREVI---NGNIKTITEYKLNDKDK 67

Query: 68  KVKITTTTRTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRL--TMVSTEEILLERPRA 127
           K+KI    RT K+   + SK    R++W KFG++ ++  G  +  T VS + ++      
Sbjct: 68  KIKI---VRTFKIETLKASKVVAHRKNWKKFGNSEYDPPGPNVATTTVSDDVLMTFITNK 127

Query: 128 PGSKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKD-LAPQADGL----- 187
                +E +   DP+ +L   G  ++ CR C  KGDHWT+RCPYKD L P    L     
Sbjct: 128 EDLNNQEEE---DPMNKL--KGQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQLG 187

Query: 188 ----DKPVAPEA---ATAAPGATKGAYVPPGMRAGAERTGTDM---RRRNDENSVRVTNL 247
               DK  AP A      AP +  G YVPP +R G  R G  M   RR +D  ++RVTNL
Sbjct: 188 LSTADKEKAPGAEPEPAQAPVSKTGKYVPPSLRDGGSRRGESMQPNRRADDNATIRVTNL 247

Query: 248 SEDTREPDLHELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYD 286
           SEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF F++F  REDA R+I  ++G+GYD
Sbjct: 248 SEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYD 305

[Close]
BLAST of Carg22278 vs. TrEMBL
Match: tr|A0A1S3CGB5|A0A1S3CGB5_CUCME (Eukaryotic translation initiation factor 3 subunit G OS=Cucumis melo OX=3656 GN=LOC103500148 PE=3 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 2.0e-160
Identity = 282/288 (97.92%), Postives = 283/288 (98.26%), Query Frame = 0 

Query: 1   MVQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60
           MVQQTN SKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT
Sbjct: 1   MVQQTNASKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLAHARLSKHA+ERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLAHARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPEAATAAPGAT 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPE   AAPGAT
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPETTAAAPGAT 180

Query: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVAV 240
           KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDL ELFRPFGAVSRVYVAV
Sbjct: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240

Query: 241 DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 289
           DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 288

[Close]
BLAST of Carg22278 vs. TrEMBL
Match: tr|A0A0A0LCF1|A0A0A0LCF1_CUCSA (Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus OX=3659 GN=Csa_3G270800 PE=3 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 5.7e-160
Identity = 282/288 (97.92%), Postives = 282/288 (97.92%), Query Frame = 0 

Query: 1   MVQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60
           MVQQTN SKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT
Sbjct: 1   MVQQTNASKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPEAATAAPGAT 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPE   AAPGAT
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPETTAAAPGAT 180

Query: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVAV 240
           KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDL ELFRPFGAVSRVYVAV
Sbjct: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240

Query: 241 DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 289
           DQK GMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 DQKNGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 288

[Close]
BLAST of Carg22278 vs. TrEMBL
Match: tr|A0A0A0LPX8|A0A0A0LPX8_CUCSA (Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus OX=3659 GN=Csa_1G031810 PE=3 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 5.8e-152
Identity = 268/289 (92.73%), Postives = 278/289 (96.19%), Query Frame = 0 

Query: 1   MVQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60
           M Q  + SKLRWGEL+DDDGDLDFLLPPK+IIGPDENG+KK++EYQFNEDGNKVKITTTT
Sbjct: 1   MAQAASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGVKKVIEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLA+ARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLANARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPEAATAAP-GA 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQ +GLDK  APEAA AAP GA
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKATAPEAAAAAPGGA 180

Query: 181 TKGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVA 240
           TKG YVPPGMRAGA+RTGTDMRRRNDENSVRVTNLSEDTREPDL ELFRPFGAVSRVYVA
Sbjct: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA 240

Query: 241 VDQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 289
           VDQKTGMSRGFGFVNFVNREDAQR+INKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289

[Close]
BLAST of Carg22278 vs. TrEMBL
Match: tr|A0A1S3ATV2|A0A1S3ATV2_CUCME (Eukaryotic translation initiation factor 3 subunit G OS=Cucumis melo OX=3656 GN=LOC103482778 PE=3 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 1.1e-150
Identity = 267/289 (92.39%), Postives = 276/289 (95.50%), Query Frame = 0 

Query: 1   MVQQTNPSKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60
           M Q  + SKLRWGEL+DDDGDLDFLLPPK+IIGPDENG+KKI+EYQFNEDGNKVKITTTT
Sbjct: 1   MAQAASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGVKKIIEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLA+ARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLANARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPEAATAAP-GA 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQ +GLDK   PEAA AAP GA
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKATTPEAAAAAPGGA 180

Query: 181 TKGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVA 240
           TKG YVPPGMRAGA+RTGTDMRRRNDENSVRVTNLSEDTREPDL ELFR FGAVSRVYVA
Sbjct: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRSFGAVSRVYVA 240

Query: 241 VDQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 289
           VDQKTGMSRGFGFVNFVNREDAQR+INKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289

[Close]
BLAST of Carg22278 vs. TrEMBL
Match: tr|A0A2I4HHA7|A0A2I4HHA7_9ROSI (Eukaryotic translation initiation factor 3 subunit G OS=Juglans regia OX=51240 GN=LOC109017816 PE=3 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 1.3e-140
Identity = 251/283 (88.69%), Postives = 269/283 (95.05%), Query Frame = 0 

Query: 8   SKLRWGELEDDDGD-LDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTTRTRKLA 67
           +KLRWGELE+DDG+ LDFLLPP+Q+IGPDENG+KK++EY+FN+DGNKVKITTTTRTRKLA
Sbjct: 7   TKLRWGELEEDDGEYLDFLLPPRQVIGPDENGIKKVIEYRFNDDGNKVKITTTTRTRKLA 66

Query: 68  HARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLA 127
           +ARLSK AVERRSW KFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPK  GD LA
Sbjct: 67  NARLSKRAVERRSWPKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKAGGDSLA 126

Query: 128 QLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADG-LDKPVA-PEAATAAPGATKGAY 187
           QL KGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQA+G +DKP A  EA TAA GA+KGAY
Sbjct: 127 QLSKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQAEGFVDKPAAVSEATTAASGASKGAY 186

Query: 188 VPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAVSRVYVAVDQKT 247
           VPPGMRAGAERTG+DMRRRNDENSVRVTNLSEDTREPDL ELFRPFGAVSRVYVA+DQKT
Sbjct: 187 VPPGMRAGAERTGSDMRRRNDENSVRVTNLSEDTREPDLQELFRPFGAVSRVYVAIDQKT 246

Query: 248 GMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRA 288
           GMSRGFGFVNFVNREDAQR+INKLNGYGYD+LILRVEWATPRA
Sbjct: 247 GMSRGFGFVNFVNREDAQRAINKLNGYGYDSLILRVEWATPRA 289

The following BLAST results are available for this feature:
BLAST of Carg22278 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022935522.14.5e-164100.00eukaryotic translation initiation factor 3 subunit G-like [Cucurbita moschata][more]
XP_023528981.11.9e-16298.96eukaryotic translation initiation factor 3 subunit G-like [Cucurbita pepo subsp.... [more]
XP_022983539.11.6e-16198.61eukaryotic translation initiation factor 3 subunit G-like [Cucurbita maxima][more]
XP_008461580.13.0e-16097.92PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis me... [more]
XP_004145638.18.7e-16097.92PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis sa... [more]
BLAST of Carg22278 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G11400.22.6e-11869.40eukaryotic translation initiation factor 3G1[more]
AT5G06000.18.0e-10767.36eukaryotic translation initiation factor 3G2[more]
AT3G14100.11.9e-1242.22RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT1G54080.22.2e-1141.49oligouridylate-binding protein 1A[more]
AT1G17370.11.5e-0938.89oligouridylate binding protein 1B[more]
BLAST of Carg22278 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q6DRC4|EIF3G_DANRE6.5e-5040.41Eukaryotic translation initiation factor 3 subunit G OS=Danio rerio OX=7955 GN=e... [more]
sp|A7SKE9|EIF3G_NEMVE5.5e-4941.02Eukaryotic translation initiation factor 3 subunit G OS=Nematostella vectensis O... [more]
sp|Q28CY2|EIF3G_XENTR9.4e-4940.65Eukaryotic translation initiation factor 3 subunit G OS=Xenopus tropicalis OX=83... [more]
sp|Q6DJI8|EI3GA_XENLA2.1e-4840.97Eukaryotic translation initiation factor 3 subunit G-A OS=Xenopus laevis OX=8355... [more]
sp|Q641B2|EI3GB_XENLA4.7e-4839.87Eukaryotic translation initiation factor 3 subunit G-B OS=Xenopus laevis OX=8355... [more]
BLAST of Carg22278 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CGB5|A0A1S3CGB5_CUCME2.0e-16097.92Eukaryotic translation initiation factor 3 subunit G OS=Cucumis melo OX=3656 GN=... [more]
tr|A0A0A0LCF1|A0A0A0LCF1_CUCSA5.7e-16097.92Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus OX=3659 ... [more]
tr|A0A0A0LPX8|A0A0A0LPX8_CUCSA5.8e-15292.73Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus OX=3659 ... [more]
tr|A0A1S3ATV2|A0A1S3ATV2_CUCME1.1e-15092.39Eukaryotic translation initiation factor 3 subunit G OS=Cucumis melo OX=3656 GN=... [more]
tr|A0A2I4HHA7|A0A2I4HHA7_9ROSI1.3e-14088.69Eukaryotic translation initiation factor 3 subunit G OS=Juglans regia OX=51240 G... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0003676nucleic acid binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR034240eIF3G_RRM
IPR017334eIF3_g
IPR012677Nucleotide-bd_a/b_plait_sf
IPR024675eIF3g_N
IPR000504RRM_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006446 regulation of translational initiation
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
cellular_component GO:0005840 ribosome
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg22278-RACarg22278-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 208..281
e-value: 8.8E-23
score: 91.7
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 209..275
e-value: 6.7E-19
score: 67.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 207..285
score: 18.666
NoneNo IPR availablePIRSFPIRSF037949Transl_init_eIF-3_RNA-bindcoord: 1..288
e-value: 5.3E-89
score: 296.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..195
NoneNo IPR availablePANTHERPTHR10352:SF6SUBFAMILY NOT NAMEDcoord: 4..287
NoneNo IPR availablePANTHERPTHR10352EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Gcoord: 4..287
IPR024675Eukaryotic translation initiation factor 3 subunit G, N-terminalPFAMPF12353eIF3gcoord: 31..157
e-value: 5.6E-34
score: 117.1
IPR024675Eukaryotic translation initiation factor 3 subunit G, N-terminalCDDcd12933eIF3Gcoord: 37..156
e-value: 1.04856E-34
score: 122.393
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3DG3DSA:3.30.70.330coord: 178..288
e-value: 1.1E-25
score: 92.5
IPR017334Eukaryotic translation initiation factor 3 subunit GHAMAPMF_03006eIF3gcoord: 9..287
score: 28.354
IPR034240eIF3G, RNA recognition motifCDDcd12408RRM_eIF3G_likecoord: 208..283
e-value: 1.40527E-44
score: 146.916
IPR035979RNA-binding domain superfamilySUPERFAMILYSSF54928RNA-binding domain, RBDcoord: 205..286