CmaCh01G003900 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh01G003900
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Eukaryotic translation initiation factor 3 subunit G
Location	Cma_Chr01 : 1965123 .. 1968159 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACATTGCAACTTCCTCTGCCATCCCATCTTCCCCATCGAAACCCTAGCGCTCACAATCTGTGTTGCAAGCCGTAGCCTTCCCTATTCTCCGTCTCTCCTGCCCAATGGTTCAGCCGACAAATCCATCCAAATTGCGATGGGGGGAGCTAGATGACGATGATGGGGATCTTGATTTTCTTCTTCCTCCCAAGCAAGTTATTGGGCCGGACGAAAATGGGTTGAAGAAAACTATTGAGTATCAGTTTAACGAAGATGGCAACAAGGTCAAAATCACGACGACCTCTCGAACGCGCAAGCTTGCCAATGCTCGTCTGAGTAAACATGCCATAGAGCGCCGATCTTGGGCCAAGTTCGGGGATGCTGTACATGAAGACGTCGGAAGTAGGCTCACTATGGTCTCCACCGAGGAGATTCTTCTCGAGCGCCCTCGTGCTCCTGGTTTGTGTTTAAATAATCTTGATTTTGGTAGTTTTTCGGAATTGCGTGCATTTGATTGGTGTTGCAACTATTTAGTTATAATTTGATTACGGTGTATGCCATTTGTTTCTATGTTGGAGCACTTTCTTATGGTTACAGTGGTGTTTGATCTTTAGAAAACTCTGGTACTTGCTGACTGGAAATATTTAAACGTATATGGTTTGTATTTGAAACGGAGAGAATCACCTTTCGATGGTGCGAGGAGATTGATAGACTTTGCAGAACTATGCATATGTTGTATGTTCTATTTGGAATTTCAGGGTTATCTTGTGAATTGAATACTTCTGATTATCAATATATATATATTTTTTGTTAATAATCCTTGTTATTAAACATGAGAGATTTCTCTGTGCCATTCATTTGACTTCATAGTTATGAAATTTGCTTTTGCACTTCTTACGAGTAATGCTTGAATGTCTTTATACTTTTGATACAATGCTCACATTAATTCTTTATCGACCAATTGAAACGTATCTTCTTGCCTTGTTTCCTGCAAATGATTACAGGTAGCAAACCAGAGGAGCCAAAGGTTGCTGGAGACCCTCTAGCTCAACTTGGAAAAGGTGGAGCTGTTCTTATGGTCTGCCGAACTTGTGGTAAAAAGGGTGATCACTGGACCTCAAGGTGCCCTTACAAAGACCTGGCATCACAAGCTGATGGATTGGATAAGACTGTTGCACCAGAGGCTACAACTGCTGCTCCTGGTGCAACGAAGGGAGCGTACGTACCTCCAGGTATGAGAGCAGGGGCAGAGAGGACTGGAACTGACATGAGACGTAGAAATGATGAGAACTCTGTTCGTGTGACCAACCTTTCAGAGGATACTAGAGAGCCTGACTTACTTGAGCTTTTCCGACCTTTTGGTGCTGTTAGCCGAGTTTATGTCGCTGTTGATCAAAAGACTGGCATGAGCAGAGGATTTGGTTTTGTAAACTTTGTGAACCGTGAGGATGCACAAAGAGCAATTAACAAACTCAATGGATATGGTTATGATAATCTCATCCTTAGAGTTGAGTGGGCTACTCCAAGGGCGACTTAAAGGTATGATTTCTCTTTCAAACTCTCTTATGATTTGCATACTCTTGTAGCTGGATTTTTCTCCCCAACATTTTGTTAATGTTTTCTTGAGATTACTCGAGTCCAGAAAATGATTGAATCAATTTTTTTGTACCGGTAATTTACATGTAGTGGATTTAATTCAATGACTCTGTGAGTTTACTTATTTGACTGTTTGAAGCTGGGAGAAATAGCAATGTTTTTACGTTTTCATAGCGTGTTAACAGTACTGAAATGAAAATACGTAAATGTAAAGGGAAAACCGTTGCTATTCATTAAGCTTTATACGTTATTGGATAATATGTTTTGACATGTGCATATTTTACAACGTTGAGAAGAAGCCATATGCTATGTTCCATCTTTGTTGAGCAGAGATGAGAAGCAATCCTAATTCCGTCTCATTGAATTTGTAGTTTATCTGTTTGAATTTTGAGCCACTGAAATGTCTGGCGAGAACCCAAAAGGGGGGTTGGAGTTTGAATGGAGGTTTAGTCCAAGGTCTTATAGGTGCTTTCGATTAAGTGAAAACCTCTATTGTAACGTTTATAGGTGCTTTTGGTATAGTAGAGTCTGAAAATCATAAACCAAAATAACATCGCTTATTGAGTAAATTGGTGTGAGTTTAGAAACAGCTTCTAAATTCATTTCTTAAATTACAGCTTCTAAGGTGATAGTTAATATTTTTCTTAGGGTGAAAAGAGGAGTAAGAAAGTGAACTGATATAGGAAACTAATTCTTCTAAGTAGTGGAAAGGTACATATTACACTCTGCTTGCCTGTTGATGAGTGAGCTAGTTCGTAGGCAATAGCTTGACCAAGAAATTAACAGGAGAATGGCTCAATTAAGGGAGAAGCCATTAGAGCTGTCATTCAAGAGTCTCTATGGAATTATTACCTGGTCCTCCCCTAAAGCCGTAGTGAGCATAGCACCCCCAAAATTTAGTAAATGGTTCAAACCCAAGTAGCAAAATGTAGTAGTATTCTAAATAGTGTCTTGTATCGTCAAAGGATTATTGTGGTGGTTGTAGATTTGAAGTTAGTGCTATAGGTTCAAACCCAACATAATGCAATGATGATTACCAGGAATAATTGAAGAGATTACAAAATATGACAGCCTTTTAGTTTGATTATCAAACTACTCCCGGTTCTATGAATGCAGTCTTTTTCAAATAATTGCAGTTTGGTGATGGTCTTTGGCTTGATCACCCGTTTTTTGGGTCGATTATGGCATACAGTACTCAAACTTTATGTTATCTCAATTTATCACAACAAGAATGTTTGTTGTTTAGTCATATTAAAAGCCTTCCTTTTGCCAAAGATAAGATTCATGAATTATAGGCTCACAAGTGTGATAGTTTGAAGATTGCAATCTTAGAAAGTAGATGCTAGTTTGCTAGATGTTTCATCCAGTCAATGCTAACAGAAAGGAAGAAAGAATATTTGATTGCATACTGGTGTGTGGGTATCTTCCTATATGACACCATTAAATTTTGACAGCAACGAG

mRNA sequence

TACATTGCAACTTCCTCTGCCATCCCATCTTCCCCATCGAAACCCTAGCGCTCACAATCTGTGTTGCAAGCCGTAGCCTTCCCTATTCTCCGTCTCTCCTGCCCAATGGTTCAGCCGACAAATCCATCCAAATTGCGATGGGGGGAGCTAGATGACGATGATGGGGATCTTGATTTTCTTCTTCCTCCCAAGCAAGTTATTGGGCCGGACGAAAATGGGTTGAAGAAAACTATTGAGTATCAGTTTAACGAAGATGGCAACAAGGTCAAAATCACGACGACCTCTCGAACGCGCAAGCTTGCCAATGCTCGTCTGAGTAAACATGCCATAGAGCGCCGATCTTGGGCCAAGTTCGGGGATGCTGTACATGAAGACGTCGGAAGTAGGCTCACTATGGTCTCCACCGAGGAGATTCTTCTCGAGCGCCCTCGTGCTCCTGGTAGCAAACCAGAGGAGCCAAAGGTTGCTGGAGACCCTCTAGCTCAACTTGGAAAAGGTGGAGCTGTTCTTATGGTCTGCCGAACTTGTGGTAAAAAGGGTGATCACTGGACCTCAAGGTGCCCTTACAAAGACCTGGCATCACAAGCTGATGGATTGGATAAGACTGTTGCACCAGAGGCTACAACTGCTGCTCCTGGTGCAACGAAGGGAGCGTACGTACCTCCAGGTATGAGAGCAGGGGCAGAGAGGACTGGAACTGACATGAGACGTAGAAATGATGAGAACTCTGTTCGTGTGACCAACCTTTCAGAGGATACTAGAGAGCCTGACTTACTTGAGCTTTTCCGACCTTTTGGTGCTGTTAGCCGAGTTTATGTCGCTGTTGATCAAAAGACTGGCATGAGCAGAGGATTTGGTTTTGTAAACTTTGTGAACCGTGAGGATGCACAAAGAGCAATTAACAAACTCAATGGATATGGTTATGATAATCTCATCCTTAGAGTTGAGTGGGCTACTCCAAGGGCGACTTAAAGGTATGATTTCTCTTTCAAACTCTCTTATGATTTGCATACTCTTGTAGCTGGATTTTTCTCCCCAACATTTTGTTAATGTTTTCTTGAGATTACTCGAGTCCAGAAAATGATTGAATCAATTTTTTTGTACCGGTAATTTACATGTAGTGGATTTAATTCAATGACTCTGTGAGTTTACTTATTTGACTGTTTGAAGCTGGGAGAAATAGCAATGTTTTTACGTTTTCATAGCGTGTTAACAGTACTGAAATGAAAATACGTAAATGTAAAGGGAAAACCGTTGCTATTCATTAAGCTTTATACGTTATTGGATAATATGTTTTGACATGTGCATATTTTACAACGTTGAGAAGAAGCCATATGCTATGTTCCATCTTTGTTGAGCAGAGATGAGAAGCAATCCTAATTCCGTCTCATTGAATTTGTAGTTTATCTGTTTGAATTTTGAGCCACTGAAATGTCTGGCGAGAACCCAAAAGGGGGGTTGGAGTTTGAATGGAGGTTTAGTCCAAGGTCTTATAGGTGCTTTCGATTAAGTGAAAACCTCTATTGTAACGTTTATAGGTGCTTTTGGTATAGTAGAGTCTGAAAATCATAAACCAAAATAACATCGCTTATTGAGTAAATTGGTGTGAGTTTAGAAACAGCTTCTAAATTCATTTCTTAAATTACAGCTTCTAAGGTGATAGTTAATATTTTTCTTAGGGTGAAAAGAGGAGTAAGAAAGTGAACTGATATAGGAAACTAATTCTTCTAAGTAGTGGAAAGGTACATATTACACTCTGCTTGCCTGTTGATGAGTGAGCTAGTTCGTAGGCAATAGCTTGACCAAGAAATTAACAGGAGAATGGCTCAATTAAGGGAGAAGCCATTAGAGCTGTCATTCAAGAGTCTCTATGGAATTATTACCTGGTCCTCCCCTAAAGCCGTAGTGAGCATAGCACCCCCAAAATTTAGTAAATGGTTCAAACCCAAGTAGCAAAATGTAGTAGTATTCTAAATAGTGTCTTGTATCGTCAAAGGATTATTGTGGTGGTTGTAGATTTGAAGTTAGTGCTATAGGTTCAAACCCAACATAATGCAATGATGATTACCAGGAATAATTGAAGAGATTACAAAATATGACAGCCTTTTAGTTTGATTATCAAACTACTCCCGGTTCTATGAATGCAGTCTTTTTCAAATAATTGCAGTTTGGTGATGGTCTTTGGCTTGATCACCCGTTTTTTGGGTCGATTATGGCATACAGTACTCAAACTTTATGTTATCTCAATTTATCACAACAAGAATGTTTGTTGTTTAGTCATATTAAAAGCCTTCCTTTTGCCAAAGATAAGATTCATGAATTATAGGCTCACAAGTGTGATAGTTTGAAGATTGCAATCTTAGAAAGTAGATGCTAGTTTGCTAGATGTTTCATCCAGTCAATGCTAACAGAAAGGAAGAAAGAATATTTGATTGCATACTGGTGTGTGGGTATCTTCCTATATGACACCATTAAATTTTGACAGCAACGAG

Coding sequence (CDS)

ATGGTTCAGCCGACAAATCCATCCAAATTGCGATGGGGGGAGCTAGATGACGATGATGGGGATCTTGATTTTCTTCTTCCTCCCAAGCAAGTTATTGGGCCGGACGAAAATGGGTTGAAGAAAACTATTGAGTATCAGTTTAACGAAGATGGCAACAAGGTCAAAATCACGACGACCTCTCGAACGCGCAAGCTTGCCAATGCTCGTCTGAGTAAACATGCCATAGAGCGCCGATCTTGGGCCAAGTTCGGGGATGCTGTACATGAAGACGTCGGAAGTAGGCTCACTATGGTCTCCACCGAGGAGATTCTTCTCGAGCGCCCTCGTGCTCCTGGTAGCAAACCAGAGGAGCCAAAGGTTGCTGGAGACCCTCTAGCTCAACTTGGAAAAGGTGGAGCTGTTCTTATGGTCTGCCGAACTTGTGGTAAAAAGGGTGATCACTGGACCTCAAGGTGCCCTTACAAAGACCTGGCATCACAAGCTGATGGATTGGATAAGACTGTTGCACCAGAGGCTACAACTGCTGCTCCTGGTGCAACGAAGGGAGCGTACGTACCTCCAGGTATGAGAGCAGGGGCAGAGAGGACTGGAACTGACATGAGACGTAGAAATGATGAGAACTCTGTTCGTGTGACCAACCTTTCAGAGGATACTAGAGAGCCTGACTTACTTGAGCTTTTCCGACCTTTTGGTGCTGTTAGCCGAGTTTATGTCGCTGTTGATCAAAAGACTGGCATGAGCAGAGGATTTGGTTTTGTAAACTTTGTGAACCGTGAGGATGCACAAAGAGCAATTAACAAACTCAATGGATATGGTTATGATAATCTCATCCTTAGAGTTGAGTGGGCTACTCCAAGGGCGACTTAA

Protein sequence

MVQPTNPSKLRWGELDDDDGDLDFLLPPKQVIGPDENGLKKTIEYQFNEDGNKVKITTTSRTRKLANARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLASQADGLDKTVAPEATTAAPGATKGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT

Homology

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BLAST of CmaCh01G003900 vs. Swiss-Prot
Match: EIF3G_DANRE (Eukaryotic translation initiation factor 3 subunit G OS=Danio rerio GN=eif3g PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.1e-49
Identity = 121/293 (41.30%), Postives = 167/293 (57.00%), Query Frame = 1


Query: 8   SKLRWGELDDDDGDLDFLLPPKQVIGPDENGLKKTIEYQFNEDGNKVKITTTSRTRKLAN 67
           SK  W +  +++GD   L  PK+ +   +  +K   EY+ ++DG K KI    RT K+  
Sbjct: 9   SKPSWADQVEEEGDEGSLPSPKETV---KGNIKTVTEYKIDDDGQKFKII---RTFKIET 68

Query: 68  ARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQ 127
            + SK    R++W KFG++ ++  G  +   +  + +     +            DP+ +
Sbjct: 69  RKASKAVARRKNWKKFGNSEYDAPGPNVATTTVSDDVFMTFISSKEDLNAQDQDEDPMNK 128

Query: 128 LGKGGAVLMVCRTCGKKGDHWTSRCPYKD--------LASQADGL---DKTVAPEATTAA 187
           L   G  ++ CR C  KGDHWT+RCPYKD        LA Q  GL   +K  A E   A 
Sbjct: 129 LK--GQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQL-GLSTGEKEKAAEPEPAQ 188

Query: 188 PGATK-GAYVPPGMRAGAERTGTDM---RRRNDENSVRVTNLSEDTREPDLLELFRPFGA 247
           P   K G YVPP +R G  R G  M   RR +D  ++RVTNLSEDTRE DL ELFRPFG+
Sbjct: 189 PVQNKTGKYVPPSLRDGGTRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGS 248

Query: 248 VSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATP 286
           +SR+Y+A D+ TG S+GF F++F  REDA RAI  ++G+GYD+LIL VEWA P
Sbjct: 249 ISRIYLAKDKNTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKP 290

[Close]

BLAST of CmaCh01G003900 vs. Swiss-Prot
Match: EIF3G_XENTR (Eukaryotic translation initiation factor 3 subunit G OS=Xenopus tropicalis GN=eif3g PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 7.1e-49
Identity = 130/311 (41.80%), Postives = 177/311 (56.91%), Query Frame = 1


Query: 8   SKLRWGELDDDDG-DLDFLLPPKQVIGPDE------------NGLKKTI-EYQFNEDGNK 67
           SK  W +  +++G D + + PP   +  D             NG  KTI EY+ N++G K
Sbjct: 8   SKPSWADQVEEEGIDPEPISPPVTKVQQDPASFVLDTPQEVINGKIKTITEYKLNDEGKK 67

Query: 68  VKITTTSRTRKLANARLSKHAIERRSWAKFGDAVHEDVGSRL--TMVSTEEILLERPRAP 127
           +KI    RT K+   + SK    R++W KFG++ ++  G  +  T VS + ++       
Sbjct: 68  IKIV---RTFKIETLKASKVVAHRKNWKKFGNSEYDPPGPNVATTTVSDDVLMTFITSKE 127

Query: 128 GSKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKD--------LASQADG 187
               +E +   DP+ +L   G  ++ CR C  KGDHWT+RCPYKD        LA Q  G
Sbjct: 128 DLNNQEEE---DPMNKLK--GQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQL-G 187

Query: 188 L---DKTVAPEAT---TAAPGATKGAYVPPGMRAGAERTGTDM---RRRNDENSVRVTNL 247
           L   DK  AP A      AP +  G YVPP +R G  R G  M   RR +D  ++RVTNL
Sbjct: 188 LSTGDKEKAPGAEPEPAQAPVSKTGKYVPPSLRDGGSRRGESMQPNRRADDNATIRVTNL 247

Query: 248 SEDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYD 286
           SEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF F++F  REDA RAI  ++G+GYD
Sbjct: 248 SEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYD 307

[Close]

BLAST of CmaCh01G003900 vs. Swiss-Prot
Match: EI3GA_XENLA (Eukaryotic translation initiation factor 3 subunit G-A OS=Xenopus laevis GN=eif3g-a PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.1e-48
Identity = 125/278 (44.96%), Postives = 166/278 (59.71%), Query Frame = 1


Query: 28  PKQVIGPDENGLKKTI-EYQFNEDGNKVKITTTSRTRKLANARLSKHAIERRSWAKFGDA 87
           P++VI    NG  KTI EY+ N+D   VKI    RT K+   + SK   +R++W KFG++
Sbjct: 43  PREVI----NGNIKTITEYKLNDDDKTVKIV---RTFKIETVKASKVVAQRKNWKKFGNS 102

Query: 88  VHEDVGSRL--TMVSTEEILLERPRAPGSKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKK 147
            ++  G  +  T VS + ++           +E +   DP+ +L   G  ++ CR C  K
Sbjct: 103 EYDPPGPNVATTTVSDDVLMTFITNKEDLNNQEEE---DPMNKLK--GQKIVSCRIC--K 162

Query: 148 GDHWTSRCPYKD--------LASQADGL---DKTVAPEAT---TAAPGATKGAYVPPGMR 207
           GDHWT+RCPYKD        LA Q  GL   DK  AP A      AP +  G YVPP +R
Sbjct: 163 GDHWTTRCPYKDTLGPMQKELAEQL-GLSTGDKEKAPGAEPEPAQAPVSKTGKYVPPSLR 222

Query: 208 AGAERTGTDM---RRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGMS 267
            G  R G  M   RR +D  ++RVTNLSEDTRE DL ELFRPFG++SR+Y+A D+ TG S
Sbjct: 223 DGGSRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQS 282

Query: 268 RGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATP 286
           +GF F++F  REDA RAI  ++G+GYD+LIL VEWA P
Sbjct: 283 KGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKP 305

[Close]

BLAST of CmaCh01G003900 vs. Swiss-Prot
Match: EIF3G_NEMVE (Eukaryotic translation initiation factor 3 subunit G OS=Nematostella vectensis GN=v1g171563 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 4.6e-48
Identity = 123/295 (41.69%), Postives = 166/295 (56.27%), Query Frame = 1


Query: 9   KLRWGELDDDDGD--LDFLLPPKQVIGPDENGLKKTIEYQFNEDGNKVKITTTSRTRKLA 68
           K  W +L D+ G+  L   +PP   +   EN  K   EY+ +++G   KI TT R     
Sbjct: 11  KPSWADLVDEAGETGLTGQIPPSSEVREGEN--KIVTEYKRDDEGKLQKIITTYRVE--- 70

Query: 69  NARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEE----ILLERPRAPGSKPEEPKVAG 128
             R++K   +R+ W KFGD+ ++  G   T  +  +    IL      P +  E      
Sbjct: 71  TRRVAKEIAKRKLWKKFGDSKNDKPGPNKTTTNVCDDVFLILTSNKENPDATEE------ 130

Query: 129 DPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAS-------QADGLDKTVAPEATTA 188
           DPL +L   G  ++ CR C  KGDHWT++CPYKD          + DG  +   P +  A
Sbjct: 131 DPLKKLS--GQKIVQCRIC--KGDHWTTKCPYKDQLEVIHQQLKEDDGSGQPGTPPSEPA 190

Query: 189 APGA--TKGAYVPPGMRAGAERTGTDM--RRRNDENS-VRVTNLSEDTREPDLLELFRPF 248
            P A  T G YV PG+R GA R G  M  R + DE + +RVTNLSE+TRE DL ELFRP 
Sbjct: 191 NPAAASTSGKYVAPGLRDGANRRGETMPSRSQRDETATIRVTNLSEETRESDLQELFRPL 250

Query: 249 GAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATP 286
           G +SR+++A D+ T  S+GF F+NFV+REDA RAI  L+G+GYD+LIL VEWA P
Sbjct: 251 GPISRIFLAKDKFTNQSKGFAFINFVHREDAARAIEVLSGFGYDHLILNVEWAKP 290

[Close]

BLAST of CmaCh01G003900 vs. Swiss-Prot
Match: EI3GB_XENLA (Eukaryotic translation initiation factor 3 subunit G-B OS=Xenopus laevis GN=eif3g-b PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 4.6e-48
Identity = 129/312 (41.35%), Postives = 176/312 (56.41%), Query Frame = 1


Query: 8   SKLRWGELDDDDG-DLDFLLP--------------PKQVIGPDENGLKKTI-EYQFNEDG 67
           SK  W +  +++G D++ L P              P++VI    NG  KTI EY+ N+  
Sbjct: 8   SKPSWADQVEEEGIDVEPLSPQIKKQDPASFVLDTPREVI----NGNIKTITEYKLNDKD 67

Query: 68  NKVKITTTSRTRKLANARLSKHAIERRSWAKFGDAVHEDVGSRL--TMVSTEEILLERPR 127
            K+KI    RT K+   + SK    R++W KFG++ ++  G  +  T VS + ++     
Sbjct: 68  KKIKIV---RTFKIETLKASKVVAHRKNWKKFGNSEYDPPGPNVATTTVSDDVLMTFITN 127

Query: 128 APGSKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKD--------LASQA 187
                 +E +   DP+ +L   G  ++ CR C  KGDHWT+RCPYKD        LA Q 
Sbjct: 128 KEDLNNQEEE---DPMNKLK--GQKIVSCRIC--KGDHWTTRCPYKDTLGPMQKELAEQL 187

Query: 188 --DGLDKTVAPEAT---TAAPGATKGAYVPPGMRAGAERTGTDM---RRRNDENSVRVTN 247
                DK  AP A      AP +  G YVPP +R G  R G  M   RR +D  ++RVTN
Sbjct: 188 GLSTADKEKAPGAEPEPAQAPVSKTGKYVPPSLRDGGSRRGESMQPNRRADDNATIRVTN 247

Query: 248 LSEDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGY 286
           LSEDTRE DL ELFRPFG++SR+Y+A D+ TG S+GF F++F  REDA RAI  ++G+GY
Sbjct: 248 LSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGY 305

[Close]

BLAST of CmaCh01G003900 vs. TrEMBL
Match: A0A0A0LCF1_CUCSA (Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus GN=Csa_3G270800 PE=3 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 2.1e-156
Identity = 273/288 (94.79%), Postives = 280/288 (97.22%), Query Frame = 1


Query: 1   MVQPTNPSKLRWGELDDDDGDLDFLLPPKQVIGPDENGLKKTIEYQFNEDGNKVKITTTS 60
           MVQ TN SKLRWGEL+DDDGDLDFLLPPKQ+IGPDENGLKK +EYQFNEDGNKVKITTT+
Sbjct: 1   MVQQTNASKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLANARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLA+ARLSKHA+ERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLASQADGLDKTVAPEATTAAPGAT 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA QADGLDK VAPE T AAPGAT
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPETTAAAPGAT 180

Query: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240
           KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV
Sbjct: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240

Query: 241 DQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289
           DQK GMSRGFGFVNFVNREDAQR+INKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 DQKNGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 288

[Close]

BLAST of CmaCh01G003900 vs. TrEMBL
Match: A0A0A0LPX8_CUCSA (Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus GN=Csa_1G031810 PE=3 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 1.8e-152
Identity = 268/289 (92.73%), Postives = 276/289 (95.50%), Query Frame = 1


Query: 1   MVQPTNPSKLRWGELDDDDGDLDFLLPPKQVIGPDENGLKKTIEYQFNEDGNKVKITTTS 60
           M Q  + SKLRWGELDDDDGDLDFLLPPK++IGPDENG+KK IEYQFNEDGNKVKITTT+
Sbjct: 1   MAQAASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGVKKVIEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLANARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLANARLSKHA+ERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLANARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLASQADGLDKTVAPEATTAAP-GA 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA Q +GLDK  APEA  AAP GA
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKATAPEAAAAAPGGA 180

Query: 181 TKGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA 240
           TKG YVPPGMRAGA+RTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA
Sbjct: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA 240

Query: 241 VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289
           VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289

[Close]

BLAST of CmaCh01G003900 vs. TrEMBL
Match: A0A067FGY4_CITSI (Eukaryotic translation initiation factor 3 subunit G OS=Citrus sinensis GN=CISIN_1g022742mg PE=3 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 1.7e-137
Identity = 249/285 (87.37%), Postives = 263/285 (92.28%), Query Frame = 1


Query: 4   PTNPSKLRWGELDDDDG-DLDFLLPPKQVIGPDENGLKKTIEYQFNEDGNKVKITTTSRT 63
           PT P KLRW ELD++DG DLDFLLPPKQVIGPDENG+KK IEY+FN+DGNKVKITTT+R 
Sbjct: 8   PTQP-KLRWSELDEEDGEDLDFLLPPKQVIGPDENGVKKVIEYKFNDDGNKVKITTTTRV 67

Query: 64  RKLANARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAG 123
           RKLANARLSK A+ERR+WAKFGDAV EDVGSRLTMVSTEEILLERPRAPGSKPEE K AG
Sbjct: 68  RKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAG 127

Query: 124 DPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLASQADG-LDKTVAPEATTAAPGATK 183
           D LAQLGKGGAVLMVCRTCGKKGDHWTSRCP+KDLA+ A+  +DK  A E   AA GATK
Sbjct: 128 DSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPAASETAAAAAGATK 187

Query: 184 GAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVD 243
           G YVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVD
Sbjct: 188 GTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVD 247

Query: 244 QKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPR 287
           QKTG+SRGFGFVNFVN+EDAQRAINKLNGYGYDNLILRVEWATPR
Sbjct: 248 QKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 291

[Close]

BLAST of CmaCh01G003900 vs. TrEMBL
Match: V4SM86_9ROSI (Eukaryotic translation initiation factor 3 subunit G OS=Citrus clementina GN=CICLE_v10028957mg PE=3 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 4.8e-137
Identity = 248/285 (87.02%), Postives = 262/285 (91.93%), Query Frame = 1


Query: 4   PTNPSKLRWGELDDDDG-DLDFLLPPKQVIGPDENGLKKTIEYQFNEDGNKVKITTTSRT 63
           PT P KLRW ELD++DG DLDFLLPPKQVIGPDENG+KK IEY+FN+DGNKVKITTT+R 
Sbjct: 8   PTQP-KLRWSELDEEDGEDLDFLLPPKQVIGPDENGVKKVIEYKFNDDGNKVKITTTTRV 67

Query: 64  RKLANARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAG 123
           RKLANARLSK A+ERR+WAKFGDAV EDVGSRLTMVSTEEILLERPRAPGSKPEE K AG
Sbjct: 68  RKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAG 127

Query: 124 DPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLASQADG-LDKTVAPEATTAAPGATK 183
           D LAQLGKGGAVLMVCRTCGKKGDHWTSRCP+KDLA+ A+  +DK  A E   AA G TK
Sbjct: 128 DSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPAASETAAAAAGVTK 187

Query: 184 GAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVD 243
           G YVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVD
Sbjct: 188 GTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVD 247

Query: 244 QKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPR 287
           QKTG+SRGFGFVNFVN+EDAQRAINKLNGYGYDNLILRVEWATPR
Sbjct: 248 QKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 291

[Close]

BLAST of CmaCh01G003900 vs. TrEMBL
Match: A0A0D2RLM6_GOSRA (Eukaryotic translation initiation factor 3 subunit G OS=Gossypium raimondii GN=B456_003G128700 PE=3 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 1.8e-136
Identity = 244/285 (85.61%), Postives = 260/285 (91.23%), Query Frame = 1


Query: 4   PTNPSKLRWGELDDDDG-DLDFLLPPKQVIGPDENGLKKTIEYQFNEDGNKVKITTTSRT 63
           PT P+KLRWGELD+DDG DLDFLLPPKQVIGPDENG+KK IEY+FN++GNKVKITTT+R 
Sbjct: 9   PTPPTKLRWGELDEDDGEDLDFLLPPKQVIGPDENGIKKVIEYKFNDEGNKVKITTTTRV 68

Query: 64  RKLANARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAG 123
           RKLANARLSK A+ERRSW KFGDAV EDVGSRLTMVSTEEILLERPRAPGSK EE K AG
Sbjct: 69  RKLANARLSKQAVERRSWPKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKAEEQKAAG 128

Query: 124 DPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLASQADG-LDKTVAPEATTAAPGATK 183
           DPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA  A+  +DK   PE  TAA G+ K
Sbjct: 129 DPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLALPAESFVDKPAVPETATAAAGSGK 188

Query: 184 GAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVD 243
             YVPPGMRAGA+R+GTDMRRRNDENSVRVTNLSEDTRE DL ELFRPFGAVSRVYVA+D
Sbjct: 189 NTYVPPGMRAGADRSGTDMRRRNDENSVRVTNLSEDTREADLHELFRPFGAVSRVYVAID 248

Query: 244 QKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPR 287
           QKTGMSRGFGFVNFVN++DAQRAINKLNGYGYDNLILRVEWATPR
Sbjct: 249 QKTGMSRGFGFVNFVNKDDAQRAINKLNGYGYDNLILRVEWATPR 293

[Close]

BLAST of CmaCh01G003900 vs. TAIR10
Match: AT3G11400.2 (AT3G11400.2 eukaryotic translation initiation factor 3G1)

HSP 1 Score: 425.6 bits (1093), Expect = 2.4e-119
Identity = 221/313 (70.61%), Postives = 250/313 (79.87%), Query Frame = 1


Query: 8   SKLRWGELDDDDGDLDFLLPPKQVIGPDENGLKKTIEYQFNEDGNKVKITTTSRTRKLAN 67
           SK RWGE+D+D+ DLDFLLPPKQVIGPDENGLK TIEY+FN++ NKVKITT +R RKLA+
Sbjct: 10  SKFRWGEMDEDE-DLDFLLPPKQVIGPDENGLKTTIEYKFNDEENKVKITTRTRVRKLAS 69

Query: 68  ARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPG--------------- 127
           ARL+K A+ERR+W KFGDA +E+ GS LTMVSTEEILLERPRAPG               
Sbjct: 70  ARLNKRAMERRNWPKFGDAANEEAGSHLTMVSTEEILLERPRAPGDQLANHMLASIPEYE 129

Query: 128 ------------SKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLASQ 187
                       +K +E K  GD L+QLGKGGAVLMVCR C KKGDHWTS+CPYKDLA+ 
Sbjct: 130 LKCALTFVAANCTKADESKATGDGLSQLGKGGAVLMVCRICHKKGDHWTSKCPYKDLAAP 189

Query: 188 ADG-LDKTVAPEATT--AAPGATKGAYVPPGMRAGAERT--GTDMRRRNDENSVRVTNLS 247
            D  +DK    E++T  AAPG  K AYVPP MRAGA+R+  G+DMRRRNDENSVRVTNLS
Sbjct: 190 TDVFIDKPPTGESSTMSAAPGTGKAAYVPPSMRAGADRSAVGSDMRRRNDENSVRVTNLS 249

Query: 248 EDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDN 289
           EDTREPDL+ELF PFGAV+RVYVA+DQKTG+SRGFGFVNFV+REDAQRAINKLNGYGYDN
Sbjct: 250 EDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDN 309

[Close]

BLAST of CmaCh01G003900 vs. TAIR10
Match: AT5G06000.1 (AT5G06000.1 eukaryotic translation initiation factor 3G2)

HSP 1 Score: 386.0 bits (990), Expect = 2.1e-107
Identity = 193/280 (68.93%), Postives = 228/280 (81.43%), Query Frame = 1


Query: 9   KLRWGELDDDDGDLDFLLPPKQVIGPDENGLKKTIEYQFNEDGNKVKITTTSRTRKLANA 68
           KLRWGE+D+++GD DFLLPPKQ+I PD+NG+KK IEY+FNE+  KVKITTT+R +K A  
Sbjct: 11  KLRWGEIDEEEGDYDFLLPPKQMISPDQNGVKKVIEYKFNEEDKKVKITTTTRVQKRA-- 70

Query: 69  RLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQL 128
            L+K A+ERRSW KFGDA HE+  S LTM STE+I+LER RAPGS  E+  V+GD ++QL
Sbjct: 71  -LTKQAVERRSWNKFGDAAHEESSSYLTMRSTEDIILERIRAPGSNAEQSTVSGDSMSQL 130

Query: 129 GKGGAVLMVCRTCGKKGDHWTSRCPYKDLASQADGLDKTVAPEATTAAPGATKGAYVPPG 188
           GK GAVLMVCR C KKGDHWTSRCP KDL S  D  +   A  +T+   G  + AYVPP 
Sbjct: 131 GKPGAVLMVCRLCQKKGDHWTSRCPQKDLLSLMD--EPLTAETSTSTITGTGRAAYVPPS 190

Query: 189 MRAGAERT--GTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGM 248
           MR GA+R   G+DMR R+DENSVRVTNLSEDTR PDL+ELFRPFGAV+R +VA+DQKT M
Sbjct: 191 MREGADRKAGGSDMRSRHDENSVRVTNLSEDTRGPDLMELFRPFGAVTRCHVAIDQKTSM 250

Query: 249 SRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPR 287
           SRGFGFV+FV+REDAQRAINKLNGYGYDNLILRVEW+TP+
Sbjct: 251 SRGFGFVSFVSREDAQRAINKLNGYGYDNLILRVEWSTPK 285

[Close]

BLAST of CmaCh01G003900 vs. TAIR10
Match: AT3G14100.1 (AT3G14100.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-12
Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 1


Query: 202 RRNDENS---VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNR 261
           +R D +S   + V +LS +  +  L + F  F + S   V  DQKTG SRGFGFV+F N+
Sbjct: 136 QREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQ 195

Query: 262 EDAQRAINKLNGYGYDNLILRVEWATPRAT 289
           +DAQ AIN++NG    +  +R  WAT  AT
Sbjct: 196 QDAQTAINEMNGKWLSSRQIRCNWATKGAT 225

[Close]

BLAST of CmaCh01G003900 vs. TAIR10
Match: AT1G54080.2 (AT1G54080.2 oligouridylate-binding protein 1A)

HSP 1 Score: 68.6 bits (166), Expect = 7.4e-12
Identity = 40/94 (42.55%), Postives = 55/94 (58.51%), Query Frame = 1


Query: 202 RRNDENS---VRVTNLSEDTREPDLLELFRPFGAVSRVY----VAVDQKTGMSRGFGFVN 261
           +R D +S   + V +LS +  +  L + F  F + S  Y    V  DQKTG SRGFGFV+
Sbjct: 140 QREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTGRSRGFGFVS 199

Query: 262 FVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289
           F N++DAQ AIN++NG    +  +R  WAT  AT
Sbjct: 200 FRNQQDAQTAINEMNGKWVSSRQIRCNWATKGAT 233

[Close]

BLAST of CmaCh01G003900 vs. TAIR10
Match: AT4G34110.1 (AT4G34110.1 poly(A) binding protein 2)

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-10
Identity = 42/107 (39.25%), Postives = 57/107 (53.27%), Query Frame = 1


Query: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240
           K  YV P +R   ER  T    +    +V V NL+E T + DL   F  +G ++   V  
Sbjct: 192 KQVYVGPFLRR-QERDST--ANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMK 251

Query: 241 DQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRA 288
           D + G S+GFGFVNF N +DA RA+  LNG+ +D+     EW   RA
Sbjct: 252 DGE-GKSKGFGFVNFENADDAARAVESLNGHKFDD----KEWYVGRA 290

[Close]

BLAST of CmaCh01G003900 vs. NCBI nr
Match: gi|659123278|ref|XP_008461580.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis melo])

HSP 1 Score: 562.0 bits (1447), Expect = 6.0e-157
Identity = 275/288 (95.49%), Postives = 281/288 (97.57%), Query Frame = 1


Query: 1   MVQPTNPSKLRWGELDDDDGDLDFLLPPKQVIGPDENGLKKTIEYQFNEDGNKVKITTTS 60
           MVQ TN SKLRWGEL+DDDGDLDFLLPPKQ+IGPDENGLKK +EYQFNEDGNKVKITTT+
Sbjct: 1   MVQQTNASKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLANARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLA+ARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLAHARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLASQADGLDKTVAPEATTAAPGAT 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA QADGLDK VAPE T AAPGAT
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPETTAAAPGAT 180

Query: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240
           KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV
Sbjct: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240

Query: 241 DQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289
           DQKTGMSRGFGFVNFVNREDAQR+INKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 DQKTGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 288

[Close]

BLAST of CmaCh01G003900 vs. NCBI nr
Match: gi|449455799|ref|XP_004145638.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis sativus])

HSP 1 Score: 559.7 bits (1441), Expect = 3.0e-156
Identity = 273/288 (94.79%), Postives = 280/288 (97.22%), Query Frame = 1


Query: 1   MVQPTNPSKLRWGELDDDDGDLDFLLPPKQVIGPDENGLKKTIEYQFNEDGNKVKITTTS 60
           MVQ TN SKLRWGEL+DDDGDLDFLLPPKQ+IGPDENGLKK +EYQFNEDGNKVKITTT+
Sbjct: 1   MVQQTNASKLRWGELEDDDGDLDFLLPPKQIIGPDENGLKKIVEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLANARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLA+ARLSKHA+ERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLAHARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLASQADGLDKTVAPEATTAAPGAT 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA QADGLDK VAPE T AAPGAT
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQADGLDKPVAPETTAAAPGAT 180

Query: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240
           KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV
Sbjct: 181 KGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAV 240

Query: 241 DQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289
           DQK GMSRGFGFVNFVNREDAQR+INKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 DQKNGMSRGFGFVNFVNREDAQRSINKLNGYGYDNLILRVEWATPRAT 288

[Close]

BLAST of CmaCh01G003900 vs. NCBI nr
Match: gi|449439229|ref|XP_004137389.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis sativus])

HSP 1 Score: 546.6 bits (1407), Expect = 2.6e-152
Identity = 268/289 (92.73%), Postives = 276/289 (95.50%), Query Frame = 1


Query: 1   MVQPTNPSKLRWGELDDDDGDLDFLLPPKQVIGPDENGLKKTIEYQFNEDGNKVKITTTS 60
           M Q  + SKLRWGELDDDDGDLDFLLPPK++IGPDENG+KK IEYQFNEDGNKVKITTT+
Sbjct: 1   MAQAASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGVKKVIEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLANARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLANARLSKHA+ERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLANARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLASQADGLDKTVAPEATTAAP-GA 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA Q +GLDK  APEA  AAP GA
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKATAPEAAAAAPGGA 180

Query: 181 TKGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA 240
           TKG YVPPGMRAGA+RTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA
Sbjct: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA 240

Query: 241 VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289
           VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289

[Close]

BLAST of CmaCh01G003900 vs. NCBI nr
Match: gi|659066295|ref|XP_008437366.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis melo])

HSP 1 Score: 541.6 bits (1394), Expect = 8.4e-151
Identity = 266/289 (92.04%), Postives = 274/289 (94.81%), Query Frame = 1


Query: 1   MVQPTNPSKLRWGELDDDDGDLDFLLPPKQVIGPDENGLKKTIEYQFNEDGNKVKITTTS 60
           M Q  + SKLRWGELDDDDGDLDFLLPPK++IGPDENG+KK IEYQFNEDGNKVKITTT+
Sbjct: 1   MAQAASRSKLRWGELDDDDGDLDFLLPPKKIIGPDENGVKKIIEYQFNEDGNKVKITTTT 60

Query: 61  RTRKLANARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120
           RTRKLANARLSKHA+ERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV
Sbjct: 61  RTRKLANARLSKHAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKV 120

Query: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLASQADGLDKTVAPEATTAAP-GA 180
           AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLA Q +GLDK   PEA  AAP GA
Sbjct: 121 AGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKATTPEAAAAAPGGA 180

Query: 181 TKGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVA 240
           TKG YVPPGMRAGA+RTGTDMRRRNDENSVRVTNLSEDTREPDLLELFR FGAVSRVYVA
Sbjct: 181 TKGTYVPPGMRAGADRTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRSFGAVSRVYVA 240

Query: 241 VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289
           VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT
Sbjct: 241 VDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 289

[Close]

BLAST of CmaCh01G003900 vs. NCBI nr
Match: gi|568870404|ref|XP_006488394.1| (PREDICTED: eukaryotic translation initiation factor 3 subunit G [Citrus sinensis])

HSP 1 Score: 496.9 bits (1278), Expect = 2.4e-137
Identity = 249/285 (87.37%), Postives = 263/285 (92.28%), Query Frame = 1


Query: 4   PTNPSKLRWGELDDDDG-DLDFLLPPKQVIGPDENGLKKTIEYQFNEDGNKVKITTTSRT 63
           PT P KLRW ELD++DG DLDFLLPPKQVIGPDENG+KK IEY+FN+DGNKVKITTT+R 
Sbjct: 8   PTQP-KLRWSELDEEDGEDLDFLLPPKQVIGPDENGVKKVIEYKFNDDGNKVKITTTTRV 67

Query: 64  RKLANARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAG 123
           RKLANARLSK A+ERR+WAKFGDAV EDVGSRLTMVSTEEILLERPRAPGSKPEE K AG
Sbjct: 68  RKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAG 127

Query: 124 DPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLASQADG-LDKTVAPEATTAAPGATK 183
           D LAQLGKGGAVLMVCRTCGKKGDHWTSRCP+KDLA+ A+  +DK  A E   AA GATK
Sbjct: 128 DSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPAASETAAAAAGATK 187

Query: 184 GAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVD 243
           G YVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVD
Sbjct: 188 GTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVD 247

Query: 244 QKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPR 287
           QKTG+SRGFGFVNFVN+EDAQRAINKLNGYGYDNLILRVEWATPR
Sbjct: 248 QKTGISRGFGFVNFVNKEDAQRAINKLNGYGYDNLILRVEWATPR 291

The following BLAST results are available for this feature:

BLAST of CmaCh01G003900 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EIF3G_DANRE	1.1e-49	41.30	Eukaryotic translation initiation factor 3 subunit G OS=Danio rerio GN=eif3g PE=...	[more]
EIF3G_XENTR	7.1e-49	41.80	Eukaryotic translation initiation factor 3 subunit G OS=Xenopus tropicalis GN=ei...	[more]
EI3GA_XENLA	2.1e-48	44.96	Eukaryotic translation initiation factor 3 subunit G-A OS=Xenopus laevis GN=eif3...	[more]
EIF3G_NEMVE	4.6e-48	41.69	Eukaryotic translation initiation factor 3 subunit G OS=Nematostella vectensis G...	[more]
EI3GB_XENLA	4.6e-48	41.35	Eukaryotic translation initiation factor 3 subunit G-B OS=Xenopus laevis GN=eif3...	[more]

BLAST of CmaCh01G003900 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCF1_CUCSA	2.1e-156	94.79	Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus GN=Csa_3...	[more]
A0A0A0LPX8_CUCSA	1.8e-152	92.73	Eukaryotic translation initiation factor 3 subunit G OS=Cucumis sativus GN=Csa_1...	[more]
A0A067FGY4_CITSI	1.7e-137	87.37	Eukaryotic translation initiation factor 3 subunit G OS=Citrus sinensis GN=CISIN...	[more]
V4SM86_9ROSI	4.8e-137	87.02	Eukaryotic translation initiation factor 3 subunit G OS=Citrus clementina GN=CIC...	[more]
A0A0D2RLM6_GOSRA	1.8e-136	85.61	Eukaryotic translation initiation factor 3 subunit G OS=Gossypium raimondii GN=B...	[more]

BLAST of CmaCh01G003900 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G11400.2	2.4e-119	70.61	eukaryotic translation initiation factor 3G1	[more]
AT5G06000.1	2.1e-107	68.93	eukaryotic translation initiation factor 3G2	[more]
AT3G14100.1	1.9e-12	43.33	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G54080.2	7.4e-12	42.55	oligouridylate-binding protein 1A	[more]
AT4G34110.1	1.8e-10	39.25	poly(A) binding protein 2	[more]

BLAST of CmaCh01G003900 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659123278\|ref\|XP_008461580.1\|	6.0e-157	95.49	PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis me...	[more]
gi\|449455799\|ref\|XP_004145638.1\|	3.0e-156	94.79	PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis sa...	[more]
gi\|449439229\|ref\|XP_004137389.1\|	2.6e-152	92.73	PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis sa...	[more]
gi\|659066295\|ref\|XP_008437366.1\|	8.4e-151	92.04	PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis me...	[more]
gi\|568870404\|ref\|XP_006488394.1\|	2.4e-137	87.37	PREDICTED: eukaryotic translation initiation factor 3 subunit G [Citrus sinensis...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR017334	eIF3_g
IPR024675	eIF3g_N

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding
GO:0003743	translation initiation factor activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm
GO:0005852	eukaryotic translation initiation factor 3 complex

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001731	formation of translation preinitiation complex
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0001732	formation of cytoplasmic translation initiation complex
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G003900.1	CmaCh01G003900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 209..275 score: 3.5
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 208..281 score: 3.6
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 207..285 score: 19
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	G3DSA:3.30.70.330		coord: 193..286 score: 2.1
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 205..286 score: 4.03
IPR017334	Eukaryotic translation initiation factor 3 subunit G	HAMAP	MF_03006	eIF3g	coord: 9..287 score: 28
IPR017334	Eukaryotic translation initiation factor 3 subunit G	PIR	PIRSF037949	Transl_init_eIF-3_RNA-bind	coord: 1..288 score: 1.9
IPR017334	Eukaryotic translation initiation factor 3 subunit G	PANTHER	PTHR10352	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G	coord: 1..288 score: 1.5E
IPR024675	Eukaryotic translation initiation factor 3 subunit G, N-terminal	PFAM	PF12353	eIF3g	coord: 30..157 score: 4.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh01G003900	Cucsa.031540	Cucumber (Gy14) v1	cgycmaB0011
CmaCh01G003900	Cla007106	Watermelon (97103) v1	cmawmB437
CmaCh01G003900	Csa3G270800	Cucumber (Chinese Long) v2	cmacuB455
CmaCh01G003900	MELO3C023779	Melon (DHL92) v3.5.1	cmameB431
CmaCh01G003900	ClCG05G011940	Watermelon (Charleston Gray)	cmawcgB407
CmaCh01G003900	CSPI03G20520	Wild cucumber (PI 183967)	cmacpiB458
CmaCh01G003900	CmoCh01G004120	Cucurbita moschata (Rifu)	cmacmoB468
CmaCh01G003900	CmoCh14G008190	Cucurbita moschata (Rifu)	cmacmoB462
CmaCh01G003900	Lsi05G003910	Bottle gourd (USVL1VR-Ls)	cmalsiB440
CmaCh01G003900	Cp4.1LG02g17060	Cucurbita pepo (Zucchini)	cmacpeB491
CmaCh01G003900	Cp4.1LG03g06060	Cucurbita pepo (Zucchini)	cmacpeB494
CmaCh01G003900	MELO3C023779.2	Melon (DHL92) v3.6.1	cmamedB497
CmaCh01G003900	CsaV3_3G020490	Cucumber (Chinese Long) v3	cmacucB0547
CmaCh01G003900	Cla97C05G093890	Watermelon (97103) v2	cmawmbB473
CmaCh01G003900	Bhi01G001451	Wax gourd	cmawgoB0562
CmaCh01G003900	CsGy3G020230	Cucumber (Gy14) v2	cgybcmaB368
CmaCh01G003900	Carg07481	Silver-seed gourd	carcmaB1059
CmaCh01G003900	Carg22278	Silver-seed gourd	carcmaB0669

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh01G003900	CmaCh14G008040	Cucurbita maxima (Rimu)	cmacmaB255

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh01G003900	Melon (DHL92) v3.6.1	cmamedB496
CmaCh01G003900	Silver-seed gourd	carcmaB0365