Cp4.1LG03g05750 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG03g05750
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	2-isopropylmalate synthase 2
Location	Cp4.1LG03 : 4514293 .. 4525664 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCATGCCGGCAGCATTGTCGAGACCGAATCAGTTTCTTGTTCGGCAACCGAACTCTCAGTTTTCTGCCCGTCATCGGATTTATAGTCGGAATTTGCAGGTTCTTAAGAATCCTTCACGTTCACTGTCCTTTAGGACGGCGGCGGACCATGTATCACGCGTTTACTGCTGTCAGACAGAACGCGTAGTTTTGAATTCTGAATCGAAATCATCAATTAGACGTCCGCCGTACATTCCTAATCGTATTCCTGACTCTTCATATGTTCGCATATTTGATACCACTCTCCGCGATGGCGAGCAGTCTCCGGGTGCCTCTCTCACTGCTAAAGAGAAGGTTGATATTGCTCGTCAGCTCGCCAAGCTTGGCGTCGACATAATTGAGGCTGGATTCCCTGCTGCCTCGAAGGAAGACTTTGAGGCAGTCAAGATGATTGCCAAAGAGGTCGGAAATGCTGTCGATGAGGACGGGTACGTGCCTGTTATTTGTGGTCTCTCGAGGTGTAATGAGAAGGATATTCGAACTGCATGGGAGGCTGTGAAGTACTCTAAGAGACCGCGGATACATACCTTTATTGCAACGAGCGAAATTCATATGGAACATAAGCTGAGAAAGACGAGGGAGCAAGTGATTGAGATTGCTCGAAATATGGTGCAGTTTGCACGAAGTTTGGGTTGTGATGATGTTGAGTTCAGCCCTGAGGATGCTGGGAGGTTTGATCTCGATCCCAAGTTGCATGCATTCTTAAATTTTTTGTTTCATCGAATTGATCCAGAGAGTAAGTCGACTCTGCATGCTTCTTGGATTAAAAAACTCTCCATCATAATGGATATTTGGATTAAATAGTTAATAAGCTTAGATTTATCTTGGAAGTTGTAAAGTGTGAATTTGTGCAACTTGTTTCCGCCTTGTGTATGAGAATATAAAATTTTAAATTGTGTATACAAAGGTTGGTAGCAGTTTCCTATGCTTAACTTATGTAATTTTATCTACATAGCTAATAATTAGAAAATCTTTAGTTTTGATTAGCAAACTCATATACTCTATAGGTTTGACTTATTTACCTCCCGTTACACAAACTTAACCAGTGATCCCAATGTCTAAAGCGCTTCTTGAGAATTAGAGTATAGCATCCTGTTCGCTCTATCATAACATCAATTTGAAATGCATTGATTTAATGCATTTGTATGGTTTCCCTTTCCACCGATATTTAGAATTGTTTAGTGAGGGAAATTGTATTATTATTTGTGTGGATCGGACATATTGTTTATTGTACAGTCTCTGACCAATGTCTATCCCCATCCTTGTCTTGTTTGGAGCAGATCCTTCATAGGGCACCTTCACTATGGAGGTTTTCGATATCTTTGGCCATCAATCATTGTTTAACATCAATTGCTGGTCTTTTTAATTGATAAAACATTTTTCTTTTTTATGTTGTGGTTTATCAGATCTGACAGAGAGTTCCTTTATCAAATTCTGGGGGAAGTGATAAAGGCTGGGGCAACTACTCTCAACATACCAGATACTGTGGGTTATACAATGCCATTTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCACTTAAAAAATATAGGGTAAAAAAGGAAACAAGGTGTAAAGGTGGCGATGAATGTATGCTAATATCATATTTCATGGATAGATATGCTTGATAGTGATAGTTTGCATTGTAAATTATGAAGAAGGGATAAGATATACGTTTTTTTTTGGCTTGATCTTAGTCTAAATTGTTGAAGCCTTTCTGTAATCATTACCGAAAGCACACAAATTATGGATTACGAACTTCTTCAGCCTCTCCATGAATTAGCAAATTGCAAGACATAATGGATTTCTGTGTGAATTATCTAAATGCTGATTTGACCTCATCTTGAATCATAAGTAAATTATGTATGATTCTTCTCATCTCTTTGCAGGGGGCATGTGCAGGTGCAAGGCAAGTTGAGGTCACAATTAATGGAATTGGTGAGAGAGCTGGAAATGCTTCACTTGAGGAGGCAAGTTATTTTTTTTTCTATGTTTATTTCATTTATTCTACAATATACTATTATTTTATTTATTCTAATTCATACTTTCATTTTATGAAGAGTGAGGATGATTTGCAATGCAACTTATAGCATGATTGATCTAACCAATATGTTAGACTTATTTCATAAAGTTTGTTCATGCATTTATCTTCACTATTTTTTATTGGACTATGGACATTTATGGGTTACATTGTTGAGAATTAATTGTGATTGAGACTTTATAAGGGATGAGAGCAACATAAGTTTTAGAAAGAAATATATTTTGTTTCTTGCTATTCTCCTCTGTTTCTAATCTCTTTAGAACCAGAAAATTGAACTAAAATGTACCTATGAGGATAGAACTTTATGGCTACTTGAAGGGATTGAATGCCTTGATGGAAATAATGTTGATAAGTTTTGACTACTCCCTTGTTTTATAGTGGAGACTAAGAGACATGAACAATTTTCTTCAACTACATTAGGATCCAGATCATATATTTATACTCAATGGGTGTTTGAGAGGAAATGATCGGTTCACTTCTCTGAGTATTGTATAAGGGATATAAGTAGCAATGCAACAATTTAAATCTCTTTAACAGACGAGATTGGAAGACTGGAGAGCTTTAATGGACACCTCAAAGGGAGAACTAATGAATCTCTAAAGGCAGAAAAACACCCATCCCTATCTCAATGACTTCAAGCGCCTTAGAACTAAAGATGGTGGATGATTAATTACATTATCATTCATGTTAAAATTTCTTTCATCTTCCATAACTTGATGTAAATGATATAGGTCTAGAGAATTGGAAAAGTCTTTCAAGGAGAGGGCTCCATTAATGATATTTGGAAGATCTAAGGCAGTAACATCACCAAATCTAATAAACATGTTCCCCTTTTTTACTCTTGAATTCTATTGAAGTACGAAGAAAATCACGCAAATTCCCCTTTACTTCTACACAAGCCTCAATGCAATCTAACATATTAAGATGATAAGGTGAATGACCATGATGCCTTGTTGAGTGAAGACCCTAGAAAATTTTTATGCCTGTTTTAGTGACACTCAAGAGGATGACAAAAAGGAAGGTGGCAAACGCAGAAACAAGTAATCATCTAGCTTTAATGAGTAACCCATAGATACCAGATCCCTTGTTTCCGAATCGAACAACGATAACAGTTGCCCATTCTAGAAACGTTGAGATAATATACTTTCATCCGTCTTTCATCTACTGAAAAAGGGAAATATGGTAAAATCCTTGAAGAAATGGAAGATGTGCATTTGCCCAATTCCCACAAAAGCTAATAACTCAAAATGGTAGCTCAATTAGCAAAAAAAAAAAAAGACGGAGATTATGAAGAATTTGCTGCGCACTTGGGAAAATGAACAAGATAGCAAAGAGAACCAAGAAAATGAGGAAGATAGGAGTAAGCAGGGCCTTGAGGTTCTCCATGAAGATCGTCTCCAAAATTGTGAGAGGGCTGGAAGCTACTCTCAAAAAAGTTATGAAGAGACTAAGTTAAATTATTCAAGTAGAAGATTGGTGAAGTTCATCTAGAGTTTGAGGAGGATAGGTTGGGTGGCCCTTGATGTTGATGGTTCTTCGGGGGGGAGTAGTGGTTATATGGAAAGAGGATAGTATCTTTTTCTTTGATTCCCTTGTTGGTTTCTTCTTTGTTTCTATTTCTTTTACTTTTAACAACTTTTTCAATGGTTGGATTACAAGGGTCTTTTGTCCTCCCATGCCGGTTGGTAGAAATGATTTTTGACAAGAAATATTGACATAGCTGGGGTTTGCGATAAATGGTGTGGAGGTAATTTCAATGTTGCTAGATGGCTGTTTGAAAGTTTAGTGGAGGGAGGGTGACCAGAAGCATGAGGAAGTTCAAGGGGCTTATTGATGCCCTTGAGCTCATGGATATTTTGATGAAAAATGGTGAATTTACTTGGTTCAATGGTCGAGAAAGGCCTATTTCAACTAGAATAGAAAGATTCTTCATTACTAGTGATTGGAATGGGGCTTAGAAGGACATGATATCGGTAATGAGACTTTCTTGGCCAACTTTAGACCATTTCCCTCTACTAGCTTCAATTGGCAGGAACGAGCCTCTTTTAAAATTGAAAATATTTGGTTGGATCATCTTGATTTCTTCTCAAACCTTAAGAATTGGTGGGATTCTATGAGAGTTGAATGGCTGGCAGGTTTCTGTTTTATGGAAAAATTAAAGAATCTTAAAGCTCAAAATTTCACTTCTGGTTTAAAAAAGCACATCATCTAGCACAGAACAACTTGGAGTTTCTCTTGCTGAAAGTATCCTTTCCTGAACCCTTTAGGTTATTTTAGTTGTTTAACTTTGTTGTGCTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGGATCTATCCAGTGACAAATAGTCTATCCGTCATTGTACAATACAAAATTTCTTATATACAAAAGAGGATAAATCTTAAATCCAGAGAAATTAGGGTGTTTATATATTTCATTTTACATGTTACTCCATGCACATTGCAGTATTGTTTGAGATCATCTGTTTGCATAGACTTCTTAATGGCATATATGAAAAGAGCTATTCTTTTTGTTGTTTTTGAAACCATCTTTTAATATCTTCAGGTGGTAATGGCCTTACAATGTCGTGGAGAGCATGTGCTTGGAGGTCTTCATACTGGAATTAACTCGAGACATATCTTTTTGACCAGCAAGATGGTAATTATTTTTCTTAGAAAAATGCTTCCTGAAAAATTTCCTTAAAGTTAATTTTTTATACTATTCTTTTCATTTTGTTTTTTCTTTTTTTCAAAATACAAAAACTTTCCTTGAAAGCTAGACAAGTTTATTCCTTAAAGGCCTCTCATTGACAAATTTATTCCTTAGGTAGAAGAGTACACTGGTTTGAACGTACAGCCACACAAGGCTATTGTCGGAGCTAATGCTTTTGCTCATGAAAGTGGCATCCACCAGGTTAGTCTTGTTGGATTTTTATATGCAAGGTTTTTATATTAATGTCCGACTATTTCTAATATGTTGTCATATTTATCTTTCAAAACCTATCGTGATGAGATAGCTACCCAATGTACTCTATTGTTGACTATGACCTGATTCTAGCACCAGTGTTCTTTTTTTCTTTGAACAAGAAATGGAATTTTTCATTAATGAAATGAAAAGAGACTTGGGTCAAAGAAACAGAGAGAGGGTAAAAAATAAGTAAATTAATGAGCAAAACAAAACAATCCAGTGGTCCATAAAGAAAATCAAAGAAAACCAGGCACAATGTTAGAAACAGCCATCCAAAACCGCTCTAAAAGCCAGAACTAAAAAGCGACGACAACAGAACTTCGAGGCAGCAGCAAGAACCAAAAGGCTAAGAACACTGAGAATCCAAACTCCAACAAGGAAAACAACTAGGAGGCGAACAAAGAGCCTGAAACCATGAGATAACCAAAGTAAAACTCTTCACCAGATACAGTAAACGCTCCTCCAGAACCTAGAAACAATAAGTGGAAGGCAAAAACCCAGAAGAAAACAAAAGCCTCAAGGAAGTAGCACCGGTGTTTATTGTTCTAAACACATTTATAGCAAACAATTATCTTTTCTTCCCATCACTTCCTCTTTCCATGTGAGTTAAGTGAAAAAAAAAATCTTTTTAGACAATCAAATTCAGAAGCAAAGGTACTAAAAGGATGGTAATGGAAGATGATTGTTTCCTACCAGGCAGTGATGATTGTACTGAATTCTCCTCAATATGGTGGAATTAGGAGTGTGAGAAACCTTCTCTTAAACCCTCCCAAGAGGAAAAAAGAAAACAGTGTCCCATGTGTCATAATTTCTATCCTTTTGTAAGAAAAGTTACCTGTTCCTTTGAAGCTGAGCCCTTTAGAAGATAGTCTGGCTACGCCTGTAGCTTTTTGCTTCAAAGGATGACCTTGAGCCATTTCCTTTACATCAGAAAGTGCAGTTAAATACAAGGTGTAGCTGGTTGTATCTTGTAGTTTTTTCTTTTCCTCCATTATTCTTGTGCTTGAGTCGTTGGGTATTTCGAGGCCGTGGAATGTATATTATTGTTTTTAAAAAGGACTGGTTGTTTGTCGTTAATTATTGGGGAGTTACTGTGATTGTTATACAGCTGTTAAGTTCTCTTATAAAAATGGAGAACTCTTTTGATCTATTTTGATGCATGGTTTTGCTTTAAAGTTCATTATGAAGATGTTGATTGACTCTTATTTCTATATTTTTAATTCTTCTTCTTCTTCTTCTTCTTATTATTATTTTATTTGTGAGTCATGCGGGTGGTTGTTTGTCCTGTTTTGTGAGGATCCAATTGTATCTTAAATATTGCTTCTTTTTTTTTTTTTATTTTTTTTTTATTTTTACGTAGGATGGAATGCTTAAGCACAAAGGTACTTATGAAATCATAGCCCCTGAAGACATTGGCTATGAACGATCCAATGATGCTGGTATTGTTCTAGGAAAACTTAGGTATGCCATGTTGATTTATGGAAAAGGACAATGTTGTCTTTTTCTTGATTAAATTTCCCTTCCTGCCTCCTTTGTCTTCCCTTTCCCATCTCTCCATGCATGTGTCAGCATGAATTATAAAAAGACACGAAATTCATAATAATGAGATCAGGGTGGGCTTTACATAAGAGATCGATTAAAAATATTATACGCTGTGAAGCAACTTTCATCCTTTTGTGAACAAAAAAGGGAAATTTTGGAAATATCCAAAGAAATCGGGCGTGTACCATAGCATACCGAGTGTACGTTGCCTCACAGGAGGCACACTCCTTAATCGTGGGCACCTTGCAATTATGCCTTTTAGGGTTTGGCATTTTCACTTTATACATGTAGTATACTCGTGCATTTCTTTCCTGTTCTCTCTAGGTTTCTTAGCGTATGTACTTTGTTTTGTAACTGATATGGTCTAGCATCTATGCTTTATTTAATAATTTAAACTTTAGAGTTTACATAAAAATTCTTTTCAGCATTTTCTCTCAGTAAGGTTTTCTCTGTGTGCCTAGTCTGCTTCAGTTTCATTTCAAGTGTCATGAAAAACTCGGACACTTTTCCAGAATAAAGTACTTGTGCTTTGTGGAGGCCAACGGTATTTACCTCACCTAAAAGGATTAGAATCCAGTATGCAAGAAAACATGATAACCTAAAAGGACTATTCATTCATGTCCAAAATCATACAAATCCTGCAACAGAGTAGTCTATCCCTGAGATTCTCTTGTGACAGACTATCCTCACCCTCTTTCTTAATGAATTGGTCTTTCAGCATCTAATGGAACTTCAACTGAGTTATCTTGTCCTCTTCTTTGCTGTCCTGAATATATTACTTTTCTTATCTTGTTGAAACCCTCAATATCCTCGCCCATTTTCTTTCATACTAAAATTAATCATCTAATAAAGTAACTTGTAATATTTAGTTTCTGGCAGATTTCTTGCACGTTCTGACTTGTTCCAAGGATGATATGTTCTTTTTCATTGAACTTAGCTTTTGCGTTTACAGACATACTGTTCAAGAGGGTCTGTAAGAGTTTGTACCCTTTTGCAGCACCTGACACCTCTTTGTTGAGATTCCTTTGGTCCACCTAGAGGATCTTAGTAACGTTGGACATTGTAGTAAGTTATTGCTTAAGAATAGAAGAGAGGAGATTGAAGAAGCTATTTTGTCAGAAAATGCATAATTTGTGAGGCATTTTTCTGTTCAAGGTTAGATTAAGTTTAAGAAGATTTGAATGGATATTGAAAAATTTGATCTTCTTTTTTCCGTAAATCATCCTATAGGTGGGTTCAGTGATGCCAGCGGTACCAAGGGAGCTAAAGTAGTTTTTCTGGCACAGAAGAAATGAGAAACATCTATTGCCATTCTTTTGTAGTGTTAGCCCACGATTATTTTTTTACAACATTACAGGATTGACTTTCTATGTTTATGCATTTCACTTTTTGTATATTGTTCAAAGTATACTACCCCAATAACATGGTTCATTGTGACTACTTTTACAGTGGACGACATGCCCTTAAAAGTCGACTTGTGGAGGTAAATTTGGATCTCCAAGCTCAATGTTTAGGTAACCTTTCCATATTATATCATCCTTTCTGACTTTAGGCAAATGTTGTTTTTTTGTCTTTTCAGCTTGGTTATGAACTTGACAATGAGAAACTCGATAACGTATTTTGGCGTTTCAAAGCAGTAGCTGAACAAAAGAAGGTGACTCAAAATTTTGTACCCCTCTTTTGCTAGCTATTCCCTACCTGCTTCCTGCGCAGGGTAGAGTAGCACATACCAATTGGGTTTCTACTTTGACCTGTTTCAAGAACATAAATAACTGCTGCATAAGGAAGTTTTTCATATTATTTCATTCCTTGATTCCTAATTGTCAAACTTTTTGTTCTAAATCTTTTGCTCTAATTTATTTTTGACTTTCCAGAGAGTTACAGATGCTGATATTCGAGCGTTGGTATCTGATGAAGTTTTTCAACCAATTGTCCTTTGGAAGCTGCTAGATTTGCAGGTTGTTTAAATTTTGTAATTGATCTTCAGATTCGGAAAGTTGTTTTGAACAATTTTGTGATACACATATAGCATTATTTAACAACACCTCAAATGCAGGTCACTTGTGGAACTCTTGGTCTTTCCACTGCTACAGTTAAACTCCTTGATGCTGATGGGGAAGAGCACATTGCTTGTGCTGTTGGAACGGGCCCTGTAGATTCAGCTTACAAGGCTGTGGATCTCATTGTTAAGGTTTGAGATAAAGTGAAACTTTACATCTAGAATACATCTTCAGGGTGATAGTGAAGTAAAATTAGGATATTTCAGATAATTGGTTTCAAGGGCACAACAAAACATGTGACCTGGATTTAGCAAATGAGTTTGTTTGCTAAATGCATGAAAATTCTAATCCAAAACATCACGTAAAGCCTATTTGCTGTCATCTGAATAGTTTCAGATGTGAGCCTATTGGTGGTGCCATGATATTTGGCGGATATAACATAAAAAGTCATCATGATCGATAGCCAGGCTTTCAAATCCTTTCCTGTATATCTATTATCTAGTTTTATGCTATTCCTGAATTACGGACTGTGGTGTTGCCTTTTTCACCACATTTTTTTTCATAAACTAAAAACAAAACTTTTTCTTTTTTTGCTTGCCATAAACTGTTTGCTGGTTAGGTGTATCGTTCTTGAGTGAATGTGACAGTGCAGATGTGTCATTTTCATGGATGCAGGAACCAGCAACACTTCTCGAGTATTCAATGACTGCTGTCACTGAAGGTATCGATGCAATTGCCACGACCCGTGTTCTAATAAGAGGGGAAAAAAGTTACACAGCTACTCATGCATCGACTGGAGAATCAGTTCAACGAACATTTAGGTAAAAATTAGGCACAAATCGCGATGCATGCATATTTTTAAGTATAAATATATATTTTAGTGCCTAATGCTTAAGTGTTTTTTTCATTTGTCTCTATTATTCTAAAAAAATTCAATTATACCATTCCCATTTTAATAAACCTAAGCTAACATGGTATGATGCTTAAAGCTGACTAATTTAGAAGAGAAATCAGCGTACTATAGAGTTGAAATTTTCTAATAATGTCTTCACATTTATAAGACGTTGGAAAAAATTCTGCGTTTCTTCTTTAGGTGATAATTCTTCATCTAACTTTTTTCTTAGTATCATGCTTTAGGCCAACAACATGAGTGTGTTGATTAACTAGTTAAGGCATATCTAATTATCATTAAACATATATAACCTATTTTAAAATATAGTCAGTGTTGTTATAGGCGAGCCCAGGTGCTCGCATATGGCAAGAGGTGGGGGTGAAGTCTTCGCCCTATGCAAGTCTCCAAGGCGAGTGCCTTGGTGCGTCATTTGTTGCTTTTTTGTACTATCGCCATGAAGTCAGGCGAGCGCCTATTAGCATGGGCGATGAAGAACCCTATTAACATGAAAAATGGAAGAGTTTGGAGAATAAATGTAATAGTTCAAAGATGAAGAACAAGAATGAACCCAGAAGCTTTAAGAATAAGAACAAAAAGAACAGAAGAATGAAGCATAACTAAAAGGAAGAGAACGAAAGGGTCGGACGAAAGATCGATAAGTAGAAAAGACAACAGAATAAAAAACTTAACCAGTAAAGGGAAAGAAAGGTCAGATTCATTAAAGCTGCATGTTGCATGCTGCCATGACAGATGACAATCTTTCTCTTCCATTAAATTTAATGCATAGCATTATTTTCTTCCGTGACTAACAGATGCCATTATTTGAAGCTTGCTTTGTTCAATTTTAGGTCAGGCTTGTAGAACCAGTTTTTTCTAATATAAATAAAAAATTATCTACTTTTTTCAAACTTTATTTAAAGGACTCACGAGGAATGAGTCCAAACTAGGGTAGCAACCTACTGAGATCTAAATGTTGTAGTACAGGTGAGGATTATCCTGCTAGATAAATCAAGGTGCGTGCAATCTAACTTAGATACTAACAAACTAAAAGAAAATGGATAAATGGAATGTGAACCAATCTATATCAAGAGAAGAGGTTCAAACTATGGTTGTATCTACTTTGGATCAAAACCCTACAAGTATTATCTGTTACCAATTGTTGTAGTCGAAGGTTTAGGTGGTTGTCCCGTGATATCAGTCAAAAATATATGCGAGATTAGTCAAAATGTATGCAAGCTGATTCAAATGCTTACTGATTACAATAAATAGGACTAACCCAATATCAAGTTAAGAGTAAACTCTGTGACTTCTGATATTCTTCTCTTCATGCTATTTAGCTACAATATATCTATTAACTGTACATCTAGTGATACGTTTTTATTGTTGCAGTGGTATCGGAGCAGGGATGGACATAGTTGTATCAAGTGTGAAGGCCTACATTGGTGCCCTAAACAAGATGCTTGGTTTCCATGGAGTTGACATCAAGGTAACTGAAAAGAAAACATTGTCTGCATAAGAAAATATTGATTTGAAGGAGGGATGATGGTGGAAATCTTGCACTCTCAAACCAAATCAGACAGGCTTGAAAGGTTCGATTATTCTGCTTTAAGGATTTTCAAGCGAATAAGTTTCAGCATCTAATGTCGTTTGTAATTTAACTGTTTTTGTGTTATTTGGACCATTTTTGAACTTTGGTAAATTTTGTTTTTGTTACAGTTAGCTTGTCTGTGGAGAAGTACCTGTTTTAGTGTTGTCGTTGATAGACACTGAACTTGCTTTATTAGTAAATAAATATTTAAAGGCTTTATTTATTAGTCATTGTA

mRNA sequence

ATGGCCATGCCGGCAGCATTGTCGAGACCGAATCAGTTTCTTGTTCGGCAACCGAACTCTCAGTTTTCTGCCCGTCATCGGATTTATAGTCGGAATTTGCAGGTTCTTAAGAATCCTTCACGTTCACTGTCCTTTAGGACGGCGGCGGACCATATCCTTCATAGGGCACCTTCACTATGGAGATCTGACAGAGAGTTCCTTTATCAAATTCTGGGGGAAGTGATAAAGGCTGGGGCAACTACTCTCAACATACCAGATACTGGGGCATGTGCAGGTGCAAGGCAAGTTGAGGTGGTAATGGCCTTACAATGTCGTGGAGAGCATGTGCTTGGAGGTCTTCATACTGGAATTAACTCGAGACATATCTTTTTGACCAGCAAGATGGTAGAAGAGTACACTGGTTTGAACGTACAGCCACACAAGGCTATTGTCGGAGCTAATGCTTTTGCTCATGAAAGTGGCATCCACCAGGATGGAATGCTTAAGCACAAAGGTACTTATGAAATCATAGCCCCTGAAGACATTGGCTATGAACGATCCAATGATGCTGGTATTGTTCTAGGAAAACTTAGTGGACGACATGCCCTTAAAAGTCGACTTGTGGAGCTTGGTTATGAACTTGACAATGAGAAACTCGATAACGTATTTTGGCGTTTCAAAGCAGTAGCTGAACAAAAGAAGAGAGTTACAGATGCTGATATTCGAGCGTTGGTATCTGATGAAGTTTTTCAACCAATTGTCCTTTGGAAGCTGCTAGATTTGCAGGTCACTTGTGGAACTCTTGGTCTTTCCACTGCTACAGTTAAACTCCTTGATGCTGATGGGGAAGAGCACATTGCTTGTGCTGTTGGAACGGGCCCTGTAGATTCAGCTTACAAGGCTGTGGATCTCATTGTTAAGGAACCAGCAACACTTCTCGAGTATTCAATGACTGCTGTCACTGAAGGTATCGATGCAATTGCCACGACCCGTGTTCTAATAAGAGGGGAAAAAAGTTACACAGCTACTCATGCATCGACTGGAGAATCAGTTCAACGAACATTTAGTGGTATCGGAGCAGGGATGGACATAGTTGTATCAAGTGTGAAGGCCTACATTGGTGCCCTAAACAAGATGCTTGGTTTCCATGGAGTTGACATCAAGGTAACTGAAAAGAAAACATTGTCTGCATAAGAAAATATTGATTTGAAGGAGGGATGATGGTGGAAATCTTGCACTCTCAAACCAAATCAGACAGGCTTGAAAGGTTCGATTATTCTGCTTTAAGGATTTTCAAGCGAATAAGTTTCAGCATCTAATGTCGTTTGTAATTTAACTGTTTTTGTGTTATTTGGACCATTTTTGAACTTTGGTAAATTTTGTTTTTGTTACAGTTAGCTTGTCTGTGGAGAAGTACCTGTTTTAGTGTTGTCGTTGATAGACACTGAACTTGCTTTATTAGTAAATAAATATTTAAAGGCTTTATTTATTAGTCATTGTA

Coding sequence (CDS)

ATGGCCATGCCGGCAGCATTGTCGAGACCGAATCAGTTTCTTGTTCGGCAACCGAACTCTCAGTTTTCTGCCCGTCATCGGATTTATAGTCGGAATTTGCAGGTTCTTAAGAATCCTTCACGTTCACTGTCCTTTAGGACGGCGGCGGACCATATCCTTCATAGGGCACCTTCACTATGGAGATCTGACAGAGAGTTCCTTTATCAAATTCTGGGGGAAGTGATAAAGGCTGGGGCAACTACTCTCAACATACCAGATACTGGGGCATGTGCAGGTGCAAGGCAAGTTGAGGTGGTAATGGCCTTACAATGTCGTGGAGAGCATGTGCTTGGAGGTCTTCATACTGGAATTAACTCGAGACATATCTTTTTGACCAGCAAGATGGTAGAAGAGTACACTGGTTTGAACGTACAGCCACACAAGGCTATTGTCGGAGCTAATGCTTTTGCTCATGAAAGTGGCATCCACCAGGATGGAATGCTTAAGCACAAAGGTACTTATGAAATCATAGCCCCTGAAGACATTGGCTATGAACGATCCAATGATGCTGGTATTGTTCTAGGAAAACTTAGTGGACGACATGCCCTTAAAAGTCGACTTGTGGAGCTTGGTTATGAACTTGACAATGAGAAACTCGATAACGTATTTTGGCGTTTCAAAGCAGTAGCTGAACAAAAGAAGAGAGTTACAGATGCTGATATTCGAGCGTTGGTATCTGATGAAGTTTTTCAACCAATTGTCCTTTGGAAGCTGCTAGATTTGCAGGTCACTTGTGGAACTCTTGGTCTTTCCACTGCTACAGTTAAACTCCTTGATGCTGATGGGGAAGAGCACATTGCTTGTGCTGTTGGAACGGGCCCTGTAGATTCAGCTTACAAGGCTGTGGATCTCATTGTTAAGGAACCAGCAACACTTCTCGAGTATTCAATGACTGCTGTCACTGAAGGTATCGATGCAATTGCCACGACCCGTGTTCTAATAAGAGGGGAAAAAAGTTACACAGCTACTCATGCATCGACTGGAGAATCAGTTCAACGAACATTTAGTGGTATCGGAGCAGGGATGGACATAGTTGTATCAAGTGTGAAGGCCTACATTGGTGCCCTAAACAAGATGCTTGGTTTCCATGGAGTTGACATCAAGGTAACTGAAAAGAAAACATTGTCTGCATAA

Protein sequence

MAMPAALSRPNQFLVRQPNSQFSARHRIYSRNLQVLKNPSRSLSFRTAADHILHRAPSLWRSDREFLYQILGEVIKAGATTLNIPDTGACAGARQVEVVMALQCRGEHVLGGLHTGINSRHIFLTSKMVEEYTGLNVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIIAPEDIGYERSNDAGIVLGKLSGRHALKSRLVELGYELDNEKLDNVFWRFKAVAEQKKRVTDADIRALVSDEVFQPIVLWKLLDLQVTCGTLGLSTATVKLLDADGEEHIACAVGTGPVDSAYKAVDLIVKEPATLLEYSMTAVTEGIDAIATTRVLIRGEKSYTATHASTGESVQRTFSGIGAGMDIVVSSVKAYIGALNKMLGFHGVDIKVTEKKTLSA

Homology

[Close]

BLAST of Cp4.1LG03g05750 vs. Swiss-Prot
Match: LEU11_ARATH (2-isopropylmalate synthase 1, chloroplastic OS=Arabidopsis thaliana GN=IPMS1 PE=1 SV=2)

HSP 1 Score: 474.6 bits (1220), Expect = 1.1e-132
Identity = 239/306 (78.10%), Postives = 265/306 (86.60%), Query Frame = 1


Query: 87  TGACAGARQVE-----------------VVMALQCRGEHVLGGLHTGINSRHIFLTSKMV 146
           +GA AGARQ+E                 VVMA++CRG+HVLGGL TGI++RHI +TSKMV
Sbjct: 309 SGAHAGARQMEVTINGIGERAGNASLEEVVMAIKCRGDHVLGGLFTGIDTRHIVMTSKMV 368

Query: 147 EEYTGLNVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIIAPEDIGYERSNDAGIVLGK 206
           EEYTG+  QPHKAIVGANAFAHESGIHQDGMLKHKGTYEII PE+IG ERSNDAGIVLGK
Sbjct: 369 EEYTGMQTQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIICPEEIGLERSNDAGIVLGK 428

Query: 207 LSGRHALKSRLVELGYELDNEKLDNVFWRFKAVAEQKKRVTDADIRALVSDEVFQPIVLW 266
           LSGRHALK RL ELGY+LD+E+L  +FWRFK VAEQKKRVTDADI ALVSDEVFQP  +W
Sbjct: 429 LSGRHALKDRLTELGYQLDDEQLSTIFWRFKTVAEQKKRVTDADIIALVSDEVFQPEAVW 488

Query: 267 KLLDLQVTCGTLGLSTATVKLLDADGEEHIACAVGTGPVDSAYKAVDLIVKEPATLLEYS 326
           KLLD+Q+TCGTLGLSTATVKL DADG+EH+AC++GTGPVDSAYKAVDLIVKEPATLLEYS
Sbjct: 489 KLLDIQITCGTLGLSTATVKLADADGKEHVACSIGTGPVDSAYKAVDLIVKEPATLLEYS 548

Query: 327 MTAVTEGIDAIATTRVLIRGEKSYTATHASTGESVQRTFSGIGAGMDIVVSSVKAYIGAL 376
           M AVTEGIDAIATTRVLIRG   Y++T+A TGE VQRTFSG GAGMDIVVSSVKAY+GAL
Sbjct: 549 MNAVTEGIDAIATTRVLIRGSNKYSSTNAITGEEVQRTFSGTGAGMDIVVSSVKAYVGAL 608

[Close]

BLAST of Cp4.1LG03g05750 vs. Swiss-Prot
Match: LEU12_ARATH (2-isopropylmalate synthase 2, chloroplastic OS=Arabidopsis thaliana GN=IPMS2 PE=1 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 4.1e-132
Identity = 238/306 (77.78%), Postives = 270/306 (88.24%), Query Frame = 1


Query: 87  TGACAGARQVE-----------------VVMALQCRGEHVLGGLHTGINSRHIFLTSKMV 146
           +GA +GARQVE                 VVMA++CRG+HVLGGL TGI++RHI +TSKMV
Sbjct: 307 SGAHSGARQVEVTINGIGERAGNASLEEVVMAIKCRGDHVLGGLFTGIDTRHIVMTSKMV 366

Query: 147 EEYTGLNVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIIAPEDIGYERSNDAGIVLGK 206
           EEYTG+  QPHKAIVGANAFAHESGIHQDGMLKHKGTYEI++PE+IG ERSNDAGIVLGK
Sbjct: 367 EEYTGMQTQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIMSPEEIGLERSNDAGIVLGK 426

Query: 207 LSGRHALKSRLVELGYELDNEKLDNVFWRFKAVAEQKKRVTDADIRALVSDEVFQPIVLW 266
           LSGRHALK RL ELGY LD+ +L N+FWRFKAVAEQKKRVTDAD+ ALVSDEVFQP  +W
Sbjct: 427 LSGRHALKDRLNELGYVLDDGQLSNLFWRFKAVAEQKKRVTDADLIALVSDEVFQPEAVW 486

Query: 267 KLLDLQVTCGTLGLSTATVKLLDADGEEHIACAVGTGPVDSAYKAVDLIVKEPATLLEYS 326
           KLLD+Q+TCGTLGLST+TVKL D+DG+EH+AC+VGTGPVD+AYKAVDLIVKEPATLLEYS
Sbjct: 487 KLLDMQITCGTLGLSTSTVKLADSDGKEHVACSVGTGPVDAAYKAVDLIVKEPATLLEYS 546

Query: 327 MTAVTEGIDAIATTRVLIRGEKSYTATHASTGESVQRTFSGIGAGMDIVVSSVKAYIGAL 376
           M AVTEGIDAIATTRVLIRG+ +Y++T+A TGESV+RTFSG GAGMDIVVSSVKAY+GAL
Sbjct: 547 MNAVTEGIDAIATTRVLIRGDNNYSSTNAVTGESVERTFSGTGAGMDIVVSSVKAYVGAL 606

[Close]

BLAST of Cp4.1LG03g05750 vs. Swiss-Prot
Match: LEU1B_SOLPN (2-isopropylmalate synthase B OS=Solanum pennellii GN=IPMSB PE=2 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 3.4e-118
Identity = 211/305 (69.18%), Postives = 257/305 (84.26%), Query Frame = 1


Query: 88  GACAGARQVE-----------------VVMALQCRGEHVLGGLHTGINSRHIFLTSKMVE 147
           GACAGARQ+E                 VVMAL+CRGE VLGGL+TGIN++HI ++SKMVE
Sbjct: 292 GACAGARQLEVTINGIGERAGNASLEEVVMALKCRGEQVLGGLYTGINTQHILMSSKMVE 351

Query: 148 EYTGLNVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIIAPEDIGYERSNDAGIVLGKL 207
             +GL+VQPHKAIVGANAF HESGIHQDGMLKHK TYEII+PEDIG  R+N++GIV GKL
Sbjct: 352 GISGLHVQPHKAIVGANAFVHESGIHQDGMLKHKDTYEIISPEDIGLNRANESGIVFGKL 411

Query: 208 SGRHALKSRLVELGYELDNEKLDNVFWRFKAVAEQKKRVTDADIRALVSDEVFQPIVLWK 267
           SG    K +++ELGYE++ ++LD++FWRFK+VAE+KK++TD D+ AL+SDEVFQP  +W+
Sbjct: 412 SGVMLCKPKMLELGYEIEGKELDDLFWRFKSVAEKKKKITDDDLVALMSDEVFQPQFVWQ 471

Query: 268 LLDLQVTCGTLGLSTATVKLLDADGEEHIACAVGTGPVDSAYKAVDLIVKEPATLLEYSM 327
           L ++QVTCG+LGLSTATVKL+DADG EHI+C+VGTGPVD+AYKAVDLIVK P TLLEYSM
Sbjct: 472 LQNVQVTCGSLGLSTATVKLIDADGREHISCSVGTGPVDAAYKAVDLIVKVPVTLLEYSM 531

Query: 328 TAVTEGIDAIATTRVLIRGEKSYTATHASTGESVQRTFSGIGAGMDIVVSSVKAYIGALN 376
            AVT+GIDAIA+TRVLIRGE  +T+THA TGE+V RTFSG GA MDIV+SSV+AY+GALN
Sbjct: 532 NAVTQGIDAIASTRVLIRGENGHTSTHALTGETVHRTFSGTGADMDIVISSVRAYVGALN 591

[Close]

BLAST of Cp4.1LG03g05750 vs. Swiss-Prot
Match: LEU1A_SOLPN (2-isopropylmalate synthase A OS=Solanum pennellii GN=IPMSA PE=2 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 1.3e-117
Identity = 211/305 (69.18%), Postives = 256/305 (83.93%), Query Frame = 1


Query: 88  GACAGARQVE-----------------VVMALQCRGEHVLGGLHTGINSRHIFLTSKMVE 147
           GACAGARQ+E                 VVMAL+CRGE VLGGL+TGIN++HI  +SKMVE
Sbjct: 269 GACAGARQLEVTINGIGERAGNASLEEVVMALKCRGEQVLGGLYTGINTQHIVPSSKMVE 328

Query: 148 EYTGLNVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIIAPEDIGYERSNDAGIVLGKL 207
           EY+GL VQPHKAIVGANAFAHESGIHQDGMLKHK TYEII+P+D+G  RSN+AGIVLGKL
Sbjct: 329 EYSGLQVQPHKAIVGANAFAHESGIHQDGMLKHKDTYEIISPDDVGLSRSNEAGIVLGKL 388

Query: 208 SGRHALKSRLVELGYELDNEKLDNVFWRFKAVAEQKKRVTDADIRALVSDEVFQPIVLWK 267
           SGRHALKS+++ELGY++D ++L+++FWRFK+VAE+KK++TD D+ AL+SDEV QP V WK
Sbjct: 389 SGRHALKSKMLELGYDIDGKELEDLFWRFKSVAEKKKKITDDDLIALMSDEVLQPNVYWK 448

Query: 268 LLDLQVTCGTLGLSTATVKLLDADGEEHIACAVGTGPVDSAYKAVDLIVKEPATLLEYSM 327
           L D+Q+ CG+LGLSTATVKL++ DG+EHIAC+VGTGPVD+AYKAVDLIVK P TLLEYSM
Sbjct: 449 LGDVQIMCGSLGLSTATVKLINTDGQEHIACSVGTGPVDAAYKAVDLIVKVPITLLEYSM 508

Query: 328 TAVTEGIDAIATTRVLIRGEKSYTATHASTGESVQRTFSGIGAGMDIVVSSVKAYIGALN 376
            AVTEGIDAIA+TRV I     +T  + STG+++ RTFSG GA MD+V+SSV+AYIGALN
Sbjct: 509 NAVTEGIDAIASTRVSICSIDRHTIMNGSTGQTIHRTFSGTGADMDVVISSVRAYIGALN 568

[Close]

BLAST of Cp4.1LG03g05750 vs. Swiss-Prot
Match: LEU1_SOYBN (Probable 2-isopropylmalate synthase OS=Glycine max GN=GMN56 PE=2 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 4.3e-97
Identity = 180/304 (59.21%), Postives = 231/304 (75.99%), Query Frame = 1


Query: 73  EVIKAGATTLNIPDTGA---CAGARQVEVVMALQCRGEHVLGGLHTGINSRHIFLTSKMV 132
           E  + GA  L +   G       A   EVVMAL  +G+H L GL+T IN+RHI  TSKMV
Sbjct: 253 EGARTGARQLEVTINGIGERAGNASLEEVVMALASKGDHALNGLYTRINTRHILETSKMV 312

Query: 133 EEYTGLNVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIIAPEDIGYERSNDAGIVLGK 192
           EEY+G+++QPHK +VGANAF H SGIHQDGMLKHKGTYE I+PE+IG++R+   GIVLGK
Sbjct: 313 EEYSGMHLQPHKPLVGANAFVHASGIHQDGMLKHKGTYETISPEEIGHKRTTRIGIVLGK 372

Query: 193 LSGRHALKSRLVELGYELDNEKLDNVFWRFKAVAEQKKRVTDADIRALVSDEVFQPIVLW 252
           LSG  AL+ RL ELGY+L  +++D+VFW+FKA+AE+KK VTD D++ALVS + F    +W
Sbjct: 373 LSGSQALRKRLEELGYDLKEDEVDSVFWQFKAMAEKKKVVTDVDLKALVSYKAFHAESIW 432

Query: 253 KLLDLQVTCGTLGLSTATVKLLDADGEEHIACAVGTGPVDSAYKAVDLIVKEPATLLEYS 312
           KL DLQVTCGT+GLSTATVKL++ DG  H+AC++G G VDS YKA++LIVKEP  LL+YS
Sbjct: 433 KLGDLQVTCGTIGLSTATVKLVNIDGSTHVACSIGIGAVDSTYKAINLIVKEPTKLLDYS 492

Query: 313 MTAVTEGIDAIATTRVLIRGEKSYTATHASTGESVQRTFSGIGAGMDIVVSSVKAYIGAL 372
           + +VTEGI    T RV+I  E ++T+T+A T ++   TFSGI A MD+VVS+VKAY+ AL
Sbjct: 493 LNSVTEGIGVNVTARVVICRENNHTSTYAFTEDANYPTFSGIAAEMDVVVSTVKAYLVAL 552

Query: 373 NKML 374
           NK+L
Sbjct: 553 NKLL 556

[Close]

BLAST of Cp4.1LG03g05750 vs. TrEMBL
Match: A0A0A0L7C8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G363180 PE=3 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 1.7e-153
Identity = 282/320 (88.12%), Postives = 295/320 (92.19%), Query Frame = 1


Query: 88  GACAGARQVE-----------------VVMALQCRGEHVLGGLHTGINSRHIFLTSKMVE 147
           GACAGARQVE                 VVMALQCRGEHVLGGLHTGINSRHIFLTSKMVE
Sbjct: 314 GACAGARQVEVTINGIGERAGNASLEEVVMALQCRGEHVLGGLHTGINSRHIFLTSKMVE 373

Query: 148 EYTGLNVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIIAPEDIGYERSNDAGIVLGKL 207
           E+TGLNVQPHKAIVGANAFAH SGIHQDGMLKHKGTYEI+APEDIGYERSNDAGIVLGKL
Sbjct: 374 EFTGLNVQPHKAIVGANAFAHASGIHQDGMLKHKGTYEIMAPEDIGYERSNDAGIVLGKL 433

Query: 208 SGRHALKSRLVELGYELDNEKLDNVFWRFKAVAEQKKRVTDADIRALVSDEVFQPIVLWK 267
           SGRHALKS L+ELGYELD E LDNVFWRFKAVAEQKKRVTDAD+RALVSDEVFQP VLWK
Sbjct: 434 SGRHALKSLLLELGYELDGENLDNVFWRFKAVAEQKKRVTDADLRALVSDEVFQPTVLWK 493

Query: 268 LLDLQVTCGTLGLSTATVKLLDADGEEHIACAVGTGPVDSAYKAVDLIVKEPATLLEYSM 327
           LLD+QVTCGTLGLSTATVKLLDADG+EHIAC+VGTGPVDSAYKAVDLIVKEPATLLEYSM
Sbjct: 494 LLDMQVTCGTLGLSTATVKLLDADGKEHIACSVGTGPVDSAYKAVDLIVKEPATLLEYSM 553

Query: 328 TAVTEGIDAIATTRVLIRGEKSYTATHASTGESVQRTFSGIGAGMDIVVSSVKAYIGALN 387
            AVTEGIDAIATTRVLIRG+KSYT+T+A TGE+VQRTFSGIGAGMDIVVSSVKAYIGALN
Sbjct: 554 NAVTEGIDAIATTRVLIRGDKSYTSTNALTGEAVQRTFSGIGAGMDIVVSSVKAYIGALN 613

Query: 388 KMLGFHGVDIKVTEKKTLSA 391
           KMLGF G+DIKVTE+KTLSA
Sbjct: 614 KMLGFQGIDIKVTEEKTLSA 633

[Close]

BLAST of Cp4.1LG03g05750 vs. TrEMBL
Match: A0A061EJX2_THECC (2-isopropylmalate synthase 1 isoform 2 OS=Theobroma cacao GN=TCM_020103 PE=3 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 6.8e-142
Identity = 273/377 (72.41%), Postives = 292/377 (77.45%), Query Frame = 1


Query: 61  RSDREFLYQILGEVIKAGATTLNIPDT--------------------------------- 120
           RSDREFLY+ILGEVIKAGATTLNIPDT                                 
Sbjct: 231 RSDREFLYEILGEVIKAGATTLNIPDTVGINLPSEFGQLIADIKANTPGIENVIISTHCQ 290

Query: 121 ------------GACAGARQV-----------------EVVMALQCRGEHVLGGLHTGIN 180
                       GACAGARQV                 EVVMAL+CRGEHVLGGL+TGIN
Sbjct: 291 NDLGLSTANTLAGACAGARQVEVTINGIGERAGNASLEEVVMALKCRGEHVLGGLYTGIN 350

Query: 181 SRHIFLTSKMVEEYTGLNVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIIAPEDIGYE 240
           +RHI + SKMVEEYTGL+VQPHKAIVGANAFAHESGIHQDGMLKHKGTYEII+PEDIG E
Sbjct: 351 TRHIVMASKMVEEYTGLHVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIISPEDIGLE 410

Query: 241 RSNDAGIVLGKLSGRHALKSRLVELGYELDNEKLDNVFWRFKAVAEQKKRVTDADIRALV 300
           RSN+AGIVLGKLSGRHAL  RL ELGYELD E+L N+FWRFKAVAEQKKRVTDAD+ ALV
Sbjct: 411 RSNEAGIVLGKLSGRHALSDRLKELGYELDQEQLGNIFWRFKAVAEQKKRVTDADLIALV 470

Query: 301 SDEVFQPIVLWKLLDLQVTCGTLGLSTATVKLLDADGEEHIACAVGTGPVDSAYKAVDLI 360
           SDEVFQP V+WKL DLQVTCGTLGLSTATVKL+ ADGEEH+AC+VGTGPVDSAYKAVDLI
Sbjct: 471 SDEVFQPEVVWKLHDLQVTCGTLGLSTATVKLISADGEEHVACSVGTGPVDSAYKAVDLI 530

Query: 361 VKEPATLLEYSMTAVTEGIDAIATTRVLIRGEKSYTATHASTGESVQRTFSGIGAGMDIV 376
            KE  TLLEYS+ AVTEGIDAIATTRVLIR EKS+ +THA TGE   RTFSG GAGMDIV
Sbjct: 531 TKEAVTLLEYSLIAVTEGIDAIATTRVLIRTEKSHMSTHALTGEITHRTFSGTGAGMDIV 590

[Close]

BLAST of Cp4.1LG03g05750 vs. TrEMBL
Match: M5W4J9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004868mg PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 2.8e-135
Identity = 249/305 (81.64%), Postives = 270/305 (88.52%), Query Frame = 1


Query: 88  GACAGARQVE-----------------VVMALQCRGEHVLGGLHTGINSRHIFLTSKMVE 147
           GA AGARQ+E                 VVM L CRG+HVLGGL+TGIN+RHI++TSKMVE
Sbjct: 167 GASAGARQLEVTINGIGERAGNASLEEVVMTLDCRGDHVLGGLYTGINARHIYITSKMVE 226

Query: 148 EYTGLNVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIIAPEDIGYERSNDAGIVLGKL 207
           EYTGL+VQPHKAIVGANAFAHESGIHQDGMLKHKGTYEII+PEDIGYERSN+AGIVLGKL
Sbjct: 227 EYTGLHVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIISPEDIGYERSNEAGIVLGKL 286

Query: 208 SGRHALKSRLVELGYELDNEKLDNVFWRFKAVAEQKKRVTDADIRALVSDEVFQPIVLWK 267
           SGRHALK RL ELGYEL +++L+ +FWRFKAVA+QKKRVTDAD+RALVSDEVFQP V+WK
Sbjct: 287 SGRHALKKRLEELGYELADDQLETIFWRFKAVADQKKRVTDADLRALVSDEVFQPEVVWK 346

Query: 268 LLDLQVTCGTLGLSTATVKLLDADGEEHIACAVGTGPVDSAYKAVDLIVKEPATLLEYSM 327
           L DLQVTCGTLGLSTATVKL+DADG EH+ACAVGTGPVDSAYKAVDLIVKEP  LLEYSM
Sbjct: 347 LHDLQVTCGTLGLSTATVKLIDADGREHVACAVGTGPVDSAYKAVDLIVKEPVILLEYSM 406

Query: 328 TAVTEGIDAIATTRVLIRGEKSYTATHASTGESVQRTFSGIGAGMDIVVSSVKAYIGALN 376
            AVTEGIDAIATTRVLIRGE S   THA TGE+VQRTFSGIGAGMDIVVSSVKAY+GALN
Sbjct: 407 NAVTEGIDAIATTRVLIRGENSNITTHAFTGETVQRTFSGIGAGMDIVVSSVKAYVGALN 466

[Close]

BLAST of Cp4.1LG03g05750 vs. TrEMBL
Match: V4T7V3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020218mg PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 4.7e-135
Identity = 249/305 (81.64%), Postives = 271/305 (88.85%), Query Frame = 1


Query: 88  GACAGARQVE-----------------VVMALQCRGEHVLGGLHTGINSRHIFLTSKMVE 147
           GACAGARQVE                 VVMA +CRGEH+LGGL+TGIN+RHI + SKMVE
Sbjct: 112 GACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVE 171

Query: 148 EYTGLNVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIIAPEDIGYERSNDAGIVLGKL 207
           EYTGL+VQPHKAIVGANAFAHESGIHQDGMLKHKGTYEII+PEDIG ERS++AGIVLGKL
Sbjct: 172 EYTGLHVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIISPEDIGLERSSEAGIVLGKL 231

Query: 208 SGRHALKSRLVELGYELDNEKLDNVFWRFKAVAEQKKRVTDADIRALVSDEVFQPIVLWK 267
           SGRHALK RL ELGYEL++E+L  +FW FKAVAEQKKRVTDAD+ ALVSDEVFQP V+WK
Sbjct: 232 SGRHALKDRLKELGYELNDEQLGTIFWHFKAVAEQKKRVTDADLIALVSDEVFQPEVVWK 291

Query: 268 LLDLQVTCGTLGLSTATVKLLDADGEEHIACAVGTGPVDSAYKAVDLIVKEPATLLEYSM 327
           LLD+QVTCGTLGLSTATVKL+DA+GEEH+AC+ GTGPVDSAYKAVDLIVKEPATLLEYSM
Sbjct: 292 LLDMQVTCGTLGLSTATVKLMDANGEEHVACSTGTGPVDSAYKAVDLIVKEPATLLEYSM 351

Query: 328 TAVTEGIDAIATTRVLIRGEKSYTATHASTGESVQRTFSGIGAGMDIVVSSVKAYIGALN 376
            AVT GIDAIATTRVLIRGEKS  +THASTGE+VQRTFSG GAGMDIVVSSVKAYIGALN
Sbjct: 352 NAVTAGIDAIATTRVLIRGEKSQLSTHASTGETVQRTFSGTGAGMDIVVSSVKAYIGALN 411

[Close]

BLAST of Cp4.1LG03g05750 vs. TrEMBL
Match: A0A067DRT3_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0069691mg PE=4 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 6.1e-135
Identity = 248/305 (81.31%), Postives = 271/305 (88.85%), Query Frame = 1


Query: 88  GACAGARQVE-----------------VVMALQCRGEHVLGGLHTGINSRHIFLTSKMVE 147
           GACAGARQVE                 VVMA +CRGEH+LGGL+TGIN+RHI + SKMVE
Sbjct: 72  GACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVE 131

Query: 148 EYTGLNVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIIAPEDIGYERSNDAGIVLGKL 207
           EYTGL+VQPHKAIVGANAFAHESGIHQDGMLKHKGTYEII+PEDIG ERS++AGIVLGKL
Sbjct: 132 EYTGLHVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIISPEDIGLERSSEAGIVLGKL 191

Query: 208 SGRHALKSRLVELGYELDNEKLDNVFWRFKAVAEQKKRVTDADIRALVSDEVFQPIVLWK 267
           SGRHALK RL ELGYEL++E+L  +FW FKAVAEQKKRVTDAD+ ALVSDE+FQP V+WK
Sbjct: 192 SGRHALKDRLKELGYELNDEQLGTIFWHFKAVAEQKKRVTDADLIALVSDEIFQPEVVWK 251

Query: 268 LLDLQVTCGTLGLSTATVKLLDADGEEHIACAVGTGPVDSAYKAVDLIVKEPATLLEYSM 327
           LLD+QVTCGTLGLSTATVKL+DA+GEEH+AC+ GTGPVDSAYKAVDLIVKEPATLLEYSM
Sbjct: 252 LLDMQVTCGTLGLSTATVKLMDANGEEHVACSTGTGPVDSAYKAVDLIVKEPATLLEYSM 311

Query: 328 TAVTEGIDAIATTRVLIRGEKSYTATHASTGESVQRTFSGIGAGMDIVVSSVKAYIGALN 376
            AVT GIDAIATTRVLIRGEKS  +THASTGE+VQRTFSG GAGMDIVVSSVKAYIGALN
Sbjct: 312 NAVTAGIDAIATTRVLIRGEKSQLSTHASTGETVQRTFSGTGAGMDIVVSSVKAYIGALN 371

[Close]

BLAST of Cp4.1LG03g05750 vs. TAIR10
Match: AT1G18500.1 (AT1G18500.1 methylthioalkylmalate synthase-like 4)

HSP 1 Score: 474.6 bits (1220), Expect = 6.1e-134
Identity = 239/306 (78.10%), Postives = 265/306 (86.60%), Query Frame = 1


Query: 87  TGACAGARQVE-----------------VVMALQCRGEHVLGGLHTGINSRHIFLTSKMV 146
           +GA AGARQ+E                 VVMA++CRG+HVLGGL TGI++RHI +TSKMV
Sbjct: 309 SGAHAGARQMEVTINGIGERAGNASLEEVVMAIKCRGDHVLGGLFTGIDTRHIVMTSKMV 368

Query: 147 EEYTGLNVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIIAPEDIGYERSNDAGIVLGK 206
           EEYTG+  QPHKAIVGANAFAHESGIHQDGMLKHKGTYEII PE+IG ERSNDAGIVLGK
Sbjct: 369 EEYTGMQTQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIICPEEIGLERSNDAGIVLGK 428

Query: 207 LSGRHALKSRLVELGYELDNEKLDNVFWRFKAVAEQKKRVTDADIRALVSDEVFQPIVLW 266
           LSGRHALK RL ELGY+LD+E+L  +FWRFK VAEQKKRVTDADI ALVSDEVFQP  +W
Sbjct: 429 LSGRHALKDRLTELGYQLDDEQLSTIFWRFKTVAEQKKRVTDADIIALVSDEVFQPEAVW 488

Query: 267 KLLDLQVTCGTLGLSTATVKLLDADGEEHIACAVGTGPVDSAYKAVDLIVKEPATLLEYS 326
           KLLD+Q+TCGTLGLSTATVKL DADG+EH+AC++GTGPVDSAYKAVDLIVKEPATLLEYS
Sbjct: 489 KLLDIQITCGTLGLSTATVKLADADGKEHVACSIGTGPVDSAYKAVDLIVKEPATLLEYS 548

Query: 327 MTAVTEGIDAIATTRVLIRGEKSYTATHASTGESVQRTFSGIGAGMDIVVSSVKAYIGAL 376
           M AVTEGIDAIATTRVLIRG   Y++T+A TGE VQRTFSG GAGMDIVVSSVKAY+GAL
Sbjct: 549 MNAVTEGIDAIATTRVLIRGSNKYSSTNAITGEEVQRTFSGTGAGMDIVVSSVKAYVGAL 608

[Close]

BLAST of Cp4.1LG03g05750 vs. TAIR10
Match: AT1G74040.1 (AT1G74040.1 2-isopropylmalate synthase 1)

HSP 1 Score: 472.6 bits (1215), Expect = 2.3e-133
Identity = 238/306 (77.78%), Postives = 270/306 (88.24%), Query Frame = 1


Query: 87  TGACAGARQVE-----------------VVMALQCRGEHVLGGLHTGINSRHIFLTSKMV 146
           +GA +GARQVE                 VVMA++CRG+HVLGGL TGI++RHI +TSKMV
Sbjct: 307 SGAHSGARQVEVTINGIGERAGNASLEEVVMAIKCRGDHVLGGLFTGIDTRHIVMTSKMV 366

Query: 147 EEYTGLNVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIIAPEDIGYERSNDAGIVLGK 206
           EEYTG+  QPHKAIVGANAFAHESGIHQDGMLKHKGTYEI++PE+IG ERSNDAGIVLGK
Sbjct: 367 EEYTGMQTQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIMSPEEIGLERSNDAGIVLGK 426

Query: 207 LSGRHALKSRLVELGYELDNEKLDNVFWRFKAVAEQKKRVTDADIRALVSDEVFQPIVLW 266
           LSGRHALK RL ELGY LD+ +L N+FWRFKAVAEQKKRVTDAD+ ALVSDEVFQP  +W
Sbjct: 427 LSGRHALKDRLNELGYVLDDGQLSNLFWRFKAVAEQKKRVTDADLIALVSDEVFQPEAVW 486

Query: 267 KLLDLQVTCGTLGLSTATVKLLDADGEEHIACAVGTGPVDSAYKAVDLIVKEPATLLEYS 326
           KLLD+Q+TCGTLGLST+TVKL D+DG+EH+AC+VGTGPVD+AYKAVDLIVKEPATLLEYS
Sbjct: 487 KLLDMQITCGTLGLSTSTVKLADSDGKEHVACSVGTGPVDAAYKAVDLIVKEPATLLEYS 546

Query: 327 MTAVTEGIDAIATTRVLIRGEKSYTATHASTGESVQRTFSGIGAGMDIVVSSVKAYIGAL 376
           M AVTEGIDAIATTRVLIRG+ +Y++T+A TGESV+RTFSG GAGMDIVVSSVKAY+GAL
Sbjct: 547 MNAVTEGIDAIATTRVLIRGDNNYSSTNAVTGESVERTFSGTGAGMDIVVSSVKAYVGAL 606

[Close]

BLAST of Cp4.1LG03g05750 vs. TAIR10
Match: AT5G23010.1 (AT5G23010.1 methylthioalkylmalate synthase 1)

HSP 1 Score: 201.8 bits (512), Expect = 7.6e-52
Identity = 102/173 (58.96%), Postives = 132/173 (76.30%), Query Frame = 1


Query: 75  IKAGATTLNIPDTGA---CAGARQVEVVMALQCRGEHVLGGLHTGINSRHIFLTSKMVEE 134
           I+AGA  + +   G       A   EVVMAL+CRG +V+ G++T I++R I  TSKMV+E
Sbjct: 308 IRAGARQVEVTINGIGERSGNASLEEVVMALKCRGAYVINGVYTKIDTRQIMATSKMVQE 367

Query: 135 YTGLNVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIIAPEDIGYERSNDAGIVLGKLS 194
           YTGL VQ HK IVGAN F HESGIHQDG+LK++ TYEI++PEDIG  +S ++G+VLGKLS
Sbjct: 368 YTGLYVQAHKPIVGANCFVHESGIHQDGILKNRSTYEILSPEDIGIVKSQNSGLVLGKLS 427

Query: 195 GRHALKSRLVELGYELDNEKLDNVFWRFKAVAEQKKRVTDADIRALV--SDEV 243
           GRHA+K RL ELGYELD+EKL+ VF  F+ + + KKR+TDAD++ALV  SDE+
Sbjct: 428 GRHAVKDRLKELGYELDDEKLNAVFSLFRDLTKNKKRITDADLKALVTSSDEI 480

[Close]

BLAST of Cp4.1LG03g05750 vs. TAIR10
Match: AT5G23020.1 (AT5G23020.1 2-isopropylmalate synthase 2)

HSP 1 Score: 199.1 bits (505), Expect = 4.9e-51
Identity = 96/169 (56.80%), Postives = 128/169 (75.74%), Query Frame = 1


Query: 87  TGACAGARQVE-----------------VVMALQCRGEHVLGGLHTGINSRHIFLTSKMV 146
           +G CAGARQVE                 VVMAL+CRGE ++ G++T I+SR I  TSKMV
Sbjct: 306 SGICAGARQVEVTINGIGERSGNAPLEEVVMALKCRGESLMDGVYTKIDSRQIMATSKMV 365

Query: 147 EEYTGLNVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIIAPEDIGYERSNDAGIVLGK 206
           +E+TG+ VQPHK IVG N F HESGIHQDG+LK++ TYEI++PED+G  +S ++GIVLGK
Sbjct: 366 QEHTGMYVQPHKPIVGDNCFVHESGIHQDGILKNRSTYEILSPEDVGIVKSENSGIVLGK 425

Query: 207 LSGRHALKSRLVELGYELDNEKLDNVFWRFKAVAEQKKRVTDADIRALV 239
           LSGRHA+K RL ELGYE+ +EK +++F R++ + + KKR+TDAD++ALV
Sbjct: 426 LSGRHAVKDRLKELGYEISDEKFNDIFSRYRELTKDKKRITDADLKALV 474

[Close]

BLAST of Cp4.1LG03g05750 vs. NCBI nr
Match: gi|778680958|ref|XP_011651428.1| (PREDICTED: 2-isopropylmalate synthase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 550.4 bits (1417), Expect = 2.5e-153
Identity = 282/320 (88.12%), Postives = 295/320 (92.19%), Query Frame = 1


Query: 88  GACAGARQVE-----------------VVMALQCRGEHVLGGLHTGINSRHIFLTSKMVE 147
           GACAGARQVE                 VVMALQCRGEHVLGGLHTGINSRHIFLTSKMVE
Sbjct: 314 GACAGARQVEVTINGIGERAGNASLEEVVMALQCRGEHVLGGLHTGINSRHIFLTSKMVE 373

Query: 148 EYTGLNVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIIAPEDIGYERSNDAGIVLGKL 207
           E+TGLNVQPHKAIVGANAFAH SGIHQDGMLKHKGTYEI+APEDIGYERSNDAGIVLGKL
Sbjct: 374 EFTGLNVQPHKAIVGANAFAHASGIHQDGMLKHKGTYEIMAPEDIGYERSNDAGIVLGKL 433

Query: 208 SGRHALKSRLVELGYELDNEKLDNVFWRFKAVAEQKKRVTDADIRALVSDEVFQPIVLWK 267
           SGRHALKS L+ELGYELD E LDNVFWRFKAVAEQKKRVTDAD+RALVSDEVFQP VLWK
Sbjct: 434 SGRHALKSLLLELGYELDGENLDNVFWRFKAVAEQKKRVTDADLRALVSDEVFQPTVLWK 493

Query: 268 LLDLQVTCGTLGLSTATVKLLDADGEEHIACAVGTGPVDSAYKAVDLIVKEPATLLEYSM 327
           LLD+QVTCGTLGLSTATVKLLDADG+EHIAC+VGTGPVDSAYKAVDLIVKEPATLLEYSM
Sbjct: 494 LLDMQVTCGTLGLSTATVKLLDADGKEHIACSVGTGPVDSAYKAVDLIVKEPATLLEYSM 553

Query: 328 TAVTEGIDAIATTRVLIRGEKSYTATHASTGESVQRTFSGIGAGMDIVVSSVKAYIGALN 387
            AVTEGIDAIATTRVLIRG+KSYT+T+A TGE+VQRTFSGIGAGMDIVVSSVKAYIGALN
Sbjct: 554 NAVTEGIDAIATTRVLIRGDKSYTSTNALTGEAVQRTFSGIGAGMDIVVSSVKAYIGALN 613

Query: 388 KMLGFHGVDIKVTEKKTLSA 391
           KMLGF G+DIKVTE+KTLSA
Sbjct: 614 KMLGFQGIDIKVTEEKTLSA 633

[Close]

BLAST of Cp4.1LG03g05750 vs. NCBI nr
Match: gi|659114493|ref|XP_008457079.1| (PREDICTED: 2-isopropylmalate synthase 2, chloroplastic-like [Cucumis melo])

HSP 1 Score: 538.9 bits (1387), Expect = 7.4e-150
Identity = 276/316 (87.34%), Postives = 290/316 (91.77%), Query Frame = 1


Query: 88  GACAGARQVE-----------------VVMALQCRGEHVLGGLHTGINSRHIFLTSKMVE 147
           GACAGARQVE                 VVMALQCRGEHVLGGLHTGIN RHIFLTSKMVE
Sbjct: 316 GACAGARQVEVTINGIGERAGNASLEEVVMALQCRGEHVLGGLHTGINPRHIFLTSKMVE 375

Query: 148 EYTGLNVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIIAPEDIGYERSNDAGIVLGKL 207
           E+TGLNVQPHKAIVGANAFAH SGIHQDGMLKHKGTYEI+APEDIGYERSNDAGIVLGKL
Sbjct: 376 EFTGLNVQPHKAIVGANAFAHASGIHQDGMLKHKGTYEIMAPEDIGYERSNDAGIVLGKL 435

Query: 208 SGRHALKSRLVELGYELDNEKLDNVFWRFKAVAEQKKRVTDADIRALVSDEVFQPIVLWK 267
           SGRHALKSRL+ELGYELD+E L NVFWRFKAVAEQKKRVTDAD+RALVSDEVFQP VLWK
Sbjct: 436 SGRHALKSRLLELGYELDSENLHNVFWRFKAVAEQKKRVTDADLRALVSDEVFQPTVLWK 495

Query: 268 LLDLQVTCGTLGLSTATVKLLDADGEEHIACAVGTGPVDSAYKAVDLIVKEPATLLEYSM 327
           LLDLQVTCGTLGLSTATVKLLDADG+EHIAC+VGTGPVDSAYKAVDLIVKEPATLLEYSM
Sbjct: 496 LLDLQVTCGTLGLSTATVKLLDADGKEHIACSVGTGPVDSAYKAVDLIVKEPATLLEYSM 555

Query: 328 TAVTEGIDAIATTRVLIRGEKSYTATHASTGESVQRTFSGIGAGMDIVVSSVKAYIGALN 387
            AVTEGIDAIATTRVLIRG+KSYT+T+A TGE+VQRTFSGIGAGMDIVVSSVKAYIGALN
Sbjct: 556 NAVTEGIDAIATTRVLIRGDKSYTSTNALTGEAVQRTFSGIGAGMDIVVSSVKAYIGALN 615

[Close]

BLAST of Cp4.1LG03g05750 vs. NCBI nr
Match: gi|590655629|ref|XP_007034042.1| (2-isopropylmalate synthase 1 isoform 2 [Theobroma cacao])

HSP 1 Score: 511.9 bits (1317), Expect = 9.7e-142
Identity = 273/377 (72.41%), Postives = 292/377 (77.45%), Query Frame = 1


Query: 61  RSDREFLYQILGEVIKAGATTLNIPDT--------------------------------- 120
           RSDREFLY+ILGEVIKAGATTLNIPDT                                 
Sbjct: 231 RSDREFLYEILGEVIKAGATTLNIPDTVGINLPSEFGQLIADIKANTPGIENVIISTHCQ 290

Query: 121 ------------GACAGARQV-----------------EVVMALQCRGEHVLGGLHTGIN 180
                       GACAGARQV                 EVVMAL+CRGEHVLGGL+TGIN
Sbjct: 291 NDLGLSTANTLAGACAGARQVEVTINGIGERAGNASLEEVVMALKCRGEHVLGGLYTGIN 350

Query: 181 SRHIFLTSKMVEEYTGLNVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIIAPEDIGYE 240
           +RHI + SKMVEEYTGL+VQPHKAIVGANAFAHESGIHQDGMLKHKGTYEII+PEDIG E
Sbjct: 351 TRHIVMASKMVEEYTGLHVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIISPEDIGLE 410

Query: 241 RSNDAGIVLGKLSGRHALKSRLVELGYELDNEKLDNVFWRFKAVAEQKKRVTDADIRALV 300
           RSN+AGIVLGKLSGRHAL  RL ELGYELD E+L N+FWRFKAVAEQKKRVTDAD+ ALV
Sbjct: 411 RSNEAGIVLGKLSGRHALSDRLKELGYELDQEQLGNIFWRFKAVAEQKKRVTDADLIALV 470

Query: 301 SDEVFQPIVLWKLLDLQVTCGTLGLSTATVKLLDADGEEHIACAVGTGPVDSAYKAVDLI 360
           SDEVFQP V+WKL DLQVTCGTLGLSTATVKL+ ADGEEH+AC+VGTGPVDSAYKAVDLI
Sbjct: 471 SDEVFQPEVVWKLHDLQVTCGTLGLSTATVKLISADGEEHVACSVGTGPVDSAYKAVDLI 530

Query: 361 VKEPATLLEYSMTAVTEGIDAIATTRVLIRGEKSYTATHASTGESVQRTFSGIGAGMDIV 376
            KE  TLLEYS+ AVTEGIDAIATTRVLIR EKS+ +THA TGE   RTFSG GAGMDIV
Sbjct: 531 TKEAVTLLEYSLIAVTEGIDAIATTRVLIRTEKSHMSTHALTGEITHRTFSGTGAGMDIV 590

[Close]

BLAST of Cp4.1LG03g05750 vs. NCBI nr
Match: gi|743823278|ref|XP_011021916.1| (PREDICTED: 2-isopropylmalate synthase 2, chloroplastic-like [Populus euphratica])

HSP 1 Score: 501.9 bits (1291), Expect = 1.0e-138
Identity = 269/377 (71.35%), Postives = 287/377 (76.13%), Query Frame = 1


Query: 61  RSDREFLYQILGEVIKAGATTLNIPDT--------------------------------- 120
           RS+REFLY ILGEVIKAGATTLNIPDT                                 
Sbjct: 227 RSEREFLYHILGEVIKAGATTLNIPDTVGINTPSEFGQLIADIKANTPGIENVIISTHCQ 286

Query: 121 ------------GACAGARQV-----------------EVVMALQCRGEHVLGGLHTGIN 180
                       GACAGARQV                 EVVM ++CRGEHVLGGL+TGIN
Sbjct: 287 NDLGLSTANTLSGACAGARQVEVTINGIGERAGNASLEEVVMVIKCRGEHVLGGLYTGIN 346

Query: 181 SRHIFLTSKMVEEYTGLNVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIIAPEDIGYE 240
           +RHI + SKMVEEYTGL+VQPHKAIVGANAFAHESGIHQDGMLKHK TYEII+PEDIG E
Sbjct: 347 TRHITMASKMVEEYTGLHVQPHKAIVGANAFAHESGIHQDGMLKHKSTYEIISPEDIGLE 406

Query: 241 RSNDAGIVLGKLSGRHALKSRLVELGYELDNEKLDNVFWRFKAVAEQKKRVTDADIRALV 300
           RSNDAGIVLGKLSGRHALK RL ELGYELD+ +L N+FWRFKAVAE KKRVTDAD+ ALV
Sbjct: 407 RSNDAGIVLGKLSGRHALKDRLNELGYELDDAQLGNIFWRFKAVAETKKRVTDADLIALV 466

Query: 301 SDEVFQPIVLWKLLDLQVTCGTLGLSTATVKLLDADGEEHIACAVGTGPVDSAYKAVDLI 360
           SDEVFQP  +WKL DLQVTCGTLGLSTATVKLL ADGEEH+AC++GTGPVDSAYKAVDLI
Sbjct: 467 SDEVFQPENVWKLHDLQVTCGTLGLSTATVKLLSADGEEHVACSLGTGPVDSAYKAVDLI 526

Query: 361 VKEPATLLEYSMTAVTEGIDAIATTRVLIRGEKSYTATHASTGESVQRTFSGIGAGMDIV 376
           VKEP TLLEYSM AVTEGIDAIATTRV+IRGE  +  THA T E  QRTFSG GAGMDIV
Sbjct: 527 VKEPVTLLEYSMNAVTEGIDAIATTRVVIRGENQHAPTHALTDEPFQRTFSGSGAGMDIV 586

[Close]

BLAST of Cp4.1LG03g05750 vs. NCBI nr
Match: gi|645218835|ref|XP_008232677.1| (PREDICTED: 2-isopropylmalate synthase 1, chloroplastic-like isoform X2 [Prunus mume])

HSP 1 Score: 491.9 bits (1265), Expect = 1.0e-135
Identity = 249/305 (81.64%), Postives = 271/305 (88.85%), Query Frame = 1


Query: 88  GACAGARQVE-----------------VVMALQCRGEHVLGGLHTGINSRHIFLTSKMVE 147
           GA AGARQ+E                 VVM L CRG+HVLGGL+TGIN+RHI++TSKMVE
Sbjct: 311 GASAGARQLEVTINGIGERAGNASLEEVVMTLDCRGDHVLGGLYTGINARHIYITSKMVE 370

Query: 148 EYTGLNVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIIAPEDIGYERSNDAGIVLGKL 207
           EYTGL+VQPHKAIVGANAFAHESGIHQDGMLKHKGTYEII+PEDIGYERSN+AGIVLGKL
Sbjct: 371 EYTGLHVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIISPEDIGYERSNEAGIVLGKL 430

Query: 208 SGRHALKSRLVELGYELDNEKLDNVFWRFKAVAEQKKRVTDADIRALVSDEVFQPIVLWK 267
           SGRHALK RL ELGYEL +++L+ +FWRFKAVA+QKKRVTDAD+RALVSDEVFQP V+WK
Sbjct: 431 SGRHALKKRLEELGYELADDQLETIFWRFKAVADQKKRVTDADLRALVSDEVFQPEVVWK 490

Query: 268 LLDLQVTCGTLGLSTATVKLLDADGEEHIACAVGTGPVDSAYKAVDLIVKEPATLLEYSM 327
           L DLQVTCGTLGLSTATVKL+DADG EH+ACA+GTGPVDSAYKAVDLIVKEP TLLEYSM
Sbjct: 491 LHDLQVTCGTLGLSTATVKLIDADGREHVACAIGTGPVDSAYKAVDLIVKEPVTLLEYSM 550

Query: 328 TAVTEGIDAIATTRVLIRGEKSYTATHASTGESVQRTFSGIGAGMDIVVSSVKAYIGALN 376
            AVTEGIDAIATTRVLIRGE S   THA TGE+VQRTFSGIGAGMDIVVSSVKAY+GALN
Sbjct: 551 NAVTEGIDAIATTRVLIRGENSNITTHAFTGETVQRTFSGIGAGMDIVVSSVKAYVGALN 610

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g05750 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LEU11_ARATH	1.1e-132	78.10	2-isopropylmalate synthase 1, chloroplastic OS=Arabidopsis thaliana GN=IPMS1 PE=...	[more]
LEU12_ARATH	4.1e-132	77.78	2-isopropylmalate synthase 2, chloroplastic OS=Arabidopsis thaliana GN=IPMS2 PE=...	[more]
LEU1B_SOLPN	3.4e-118	69.18	2-isopropylmalate synthase B OS=Solanum pennellii GN=IPMSB PE=2 SV=1	[more]
LEU1A_SOLPN	1.3e-117	69.18	2-isopropylmalate synthase A OS=Solanum pennellii GN=IPMSA PE=2 SV=1	[more]
LEU1_SOYBN	4.3e-97	59.21	Probable 2-isopropylmalate synthase OS=Glycine max GN=GMN56 PE=2 SV=1	[more]

BLAST of Cp4.1LG03g05750 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7C8_CUCSA	1.7e-153	88.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G363180 PE=3 SV=1	[more]
A0A061EJX2_THECC	6.8e-142	72.41	2-isopropylmalate synthase 1 isoform 2 OS=Theobroma cacao GN=TCM_020103 PE=3 SV=...	[more]
M5W4J9_PRUPE	2.8e-135	81.64	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004868mg PE=4 SV=1	[more]
V4T7V3_9ROSI	4.7e-135	81.64	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020218mg PE=4 SV=1	[more]
A0A067DRT3_CITSI	6.1e-135	81.31	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0069691mg PE=4 ...	[more]

BLAST of Cp4.1LG03g05750 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G18500.1	6.1e-134	78.10	methylthioalkylmalate synthase-like 4	[more]
AT1G74040.1	2.3e-133	77.78	2-isopropylmalate synthase 1	[more]
AT5G23010.1	7.6e-52	58.96	methylthioalkylmalate synthase 1	[more]
AT5G23020.1	4.9e-51	56.80	2-isopropylmalate synthase 2	[more]

BLAST of Cp4.1LG03g05750 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680958\|ref\|XP_011651428.1\|	2.5e-153	88.13	PREDICTED: 2-isopropylmalate synthase 2, chloroplastic-like [Cucumis sativus]	[more]
gi\|659114493\|ref\|XP_008457079.1\|	7.4e-150	87.34	PREDICTED: 2-isopropylmalate synthase 2, chloroplastic-like [Cucumis melo]	[more]
gi\|590655629\|ref\|XP_007034042.1\|	9.7e-142	72.41	2-isopropylmalate synthase 1 isoform 2 [Theobroma cacao]	[more]
gi\|743823278\|ref\|XP_011021916.1\|	1.0e-138	71.35	PREDICTED: 2-isopropylmalate synthase 2, chloroplastic-like [Populus euphratica]	[more]
gi\|645218835\|ref\|XP_008232677.1\|	1.0e-135	81.64	PREDICTED: 2-isopropylmalate synthase 1, chloroplastic-like isoform X2 [Prunus m...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0003852	2-isopropylmalate synthase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0009098	leucine biosynthetic process

Vocabulary: **INTERPRO**
Term	Definition
IPR013785	Aldolase_TIM
IPR013709	2-isopropylmalate_synth_dimer

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009097	isoleucine biosynthetic process
biological_process	GO:0009098	leucine biosynthetic process
biological_process	GO:0006090	pyruvate metabolic process
biological_process	GO:0009099	valine biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009941	chloroplast envelope
molecular_function	GO:0003852	2-isopropylmalate synthase activity
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g05750.1	Cp4.1LG03g05750.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013709	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain	PFAM	PF08502	LeuA_dimer	coord: 229..373 score: 9.2
IPR013709	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain	SMART	SM00917	LeuA_dimer_2	coord: 228..373 score: 8.3
IPR013709	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain	unknown	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain	coord: 252..372 score: 1.27
IPR013785	Aldolase-type TIM barrel	GENE3D	G3DSA:3.20.20.70		coord: 51..87 score: 3.6E-4coord: 93..206 score: 9.3
None	No IPR available	PANTHER	PTHR10277	HOMOCITRATE SYNTHASE-RELATED	coord: 61..381 score: 3.4E
None	No IPR available	PANTHER	PTHR10277:SF42	SUBFAMILY NOT NAMED	coord: 61..381 score: 3.4E
None	No IPR available	unknown	SSF51569	Aldolase	coord: 60..153 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG03g05750	Cucsa.012740	Cucumber (Gy14) v1	cgycpeB0532
Cp4.1LG03g05750	CmaCh14G008550	Cucurbita maxima (Rimu)	cmacpeB283
Cp4.1LG03g05750	CmaCh01G003510	Cucurbita maxima (Rimu)	cmacpeB494
Cp4.1LG03g05750	CmoCh01G003690	Cucurbita moschata (Rifu)	cmocpeB453
Cp4.1LG03g05750	CmoCh14G008690	Cucurbita moschata (Rifu)	cmocpeB245
Cp4.1LG03g05750	Cla013165	Watermelon (97103) v1	cpewmB614
Cp4.1LG03g05750	MELO3C020296	Melon (DHL92) v3.5.1	cpemeB586
Cp4.1LG03g05750	ClCG05G010890	Watermelon (Charleston Gray)	cpewcgB560
Cp4.1LG03g05750	Lsi05G003000	Bottle gourd (USVL1VR-Ls)	cpelsiB511
Cp4.1LG03g05750	MELO3C020296.2	Melon (DHL92) v3.6.1	cpemedB694
Cp4.1LG03g05750	CsaV3_3G021690	Cucumber (Chinese Long) v3	cpecucB0749
Cp4.1LG03g05750	Bhi01G001342	Wax gourd	cpewgoB0786
Cp4.1LG03g05750	CsGy3G021090	Cucumber (Gy14) v2	cgybcpeB397
Cp4.1LG03g05750	Carg07441	Silver-seed gourd	carcpeB1073
Cp4.1LG03g05750	Carg24228	Silver-seed gourd	carcpeB0257

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG03g05750	Cp4.1LG02g16710	Cucurbita pepo (Zucchini)	cpecpeB449

The following block(s) are covering this gene:

None