Cp4.1LG03g04850 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g04850
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionATP-dependent Clp protease proteolytic subunit
LocationCp4.1LG03 : 5264043 .. 5265683 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGAGAAGGAAATAGAGGGCGGGAGGGAAAGAGAAAGAAACTCTCAAATCTGGAGGTGGAAGTTTGAAGCAGATAAACCCTCGATTACAATCCCAACAATCGAACCAGTTCGCCATGATTTGGAGGAGTTTAGCTTCCACCTCTAACCTCCTTGCTAAATCCTTCGGTTCGGCGAATGGAGCGACGGCGACGAGGGATTTTCGGCGCGCTTACAGCTTGATTCCGATGGTCATTGAACACACATCAAGAGGAGAAAGAGCCTACGATATCTTCTCTCGTCTTCTCAAGGAGCGGATAATTTGCATCAATGGTCCAATTTCTGATGATACTTCTCATGTTGTCGTTGCTCAGCTTCTCTTTCTTGAGTCTGAGAACCCCTCGAAGCCCATCAATATGTACCTCAACTCCCCCGGCGGCGCCGTCACTGCTGGTATAATACAAAGATTTATGTTACTAATTCAACCACTTCATTGTTTTGTTCATTGTCGTAACTTCTACTAGTTTCTGGACTTGTCGTTTCTGACTTTGAGAATGTTGTTAAGCCCATGAACAAATGATTAGATTGGGTTAAGGTTGATTTATCGTGATATTGAAGTGGGAGATTATCACTAAATAGTCTATAGGTTTAATCTTTTGGGTTTTGGGTTTTGGGTTTAGTGGTGCTCAATTTATAGTTTTACTGATTCGAATTATATGCTTCCCAATTTGATGTTTGTTGACAAGAAAACTATAGGTTTTCAAATTATTACAGTTCACTAGTTATGAAATTTGGCTGATCTCACGCTGGAACTCTACTTCCTTCCCCCCAATGATGTTAATTTCCAATGTTTGTTACTCCAATAGGCTTCAAATTGATTTTATGTTCCGAACTTATTGCAATTGCTAAGAAGATTCGAGGCTTTCACCTTTGATAGCATCACCAATATTTGTCATGTATTTACAGGGCTTGCTATATATGATACTATGCAGTATATAAGGTCGCCCATCAACACCATCTGTTTGGGTCAGGCTGCCTCGATGGCTTCTCTTCTTCTAGCTGCTGGTGCCAAGGGTGAGAGACGATCGCTTCCTAATGCAACTATCATGGTTCACCAGCCTTCTGGTGGATATAGTGGGCAAGCGAAGGATATGTCAATTCACACGAAACAGATTGTTCGGGTTTGGGATGCACTAAATGAGCTGTACTCCAAGCATACGTCACAGTCAGTAGAGATTATTCAAAAGTATATGGACAGGGATTATTTTATGACCCCAGAAGAGGCCAAGGAGTTTGGCATAATCGATGAGGTGATTGATCAAAGGCCAATAGCCCTGGTGACCGATGCAGTTGGTAATGAAGGCAAAGATAAAGGCTCGAGTTAAGAATTCGAGGTAGGATCTTGATGTAAAAGCATGACACTTTCAAGTTCCTTACTGACTTTTGATAGATTTATCCGAAAGTTAATTTTATCTTCCTGGATCTGATGGGAATAATTATTTTTTCCTAGCTAAATGTCCCTTTGGCTGTTTGGACCTGTATTGTTATTTTGTGTATCCAGCATTGATATGTGTATTGACAGCTTTTATTAACACTAAATAGAGAAAAGCTTGAAATTTAATAAAATTTCAGAATTTGCTCGTATATTAGATATTTTTACTCTA

mRNA sequence

TGGAGAAGGAAATAGAGGGCGGGAGGGAAAGAGAAAGAAACTCTCAAATCTGGAGGTGGAAGTTTGAAGCAGATAAACCCTCGATTACAATCCCAACAATCGAACCAGTTCGCCATGATTTGGAGGAGTTTAGCTTCCACCTCTAACCTCCTTGCTAAATCCTTCGGTTCGGCGAATGGAGCGACGGCGACGAGGGATTTTCGGCGCGCTTACAGCTTGATTCCGATGGTCATTGAACACACATCAAGAGGAGAAAGAGCCTACGATATCTTCTCTCGTCTTCTCAAGGAGCGGATAATTTGCATCAATGGTCCAATTTCTGATGATACTTCTCATGTTGTCGTTGCTCAGCTTCTCTTTCTTGAGTCTGAGAACCCCTCGAAGCCCATCAATATGTACCTCAACTCCCCCGGCGGCGCCGTCACTGCTGGGCTTGCTATATATGATACTATGCAGTATATAAGGTCGCCCATCAACACCATCTGTTTGGGTCAGGCTGCCTCGATGGCTTCTCTTCTTCTAGCTGCTGGTGCCAAGGGTGAGAGACGATCGCTTCCTAATGCAACTATCATGGTTCACCAGCCTTCTGGTGGATATAGTGGGCAAGCGAAGGATATGTCAATTCACACGAAACAGATTGTTCGGGTTTGGGATGCACTAAATGAGCTGTACTCCAAGCATACGTCACAGTCAGTAGAGATTATTCAAAAGTATATGGACAGGGATTATTTTATGACCCCAGAAGAGGCCAAGGAGTTTGGCATAATCGATGAGGTGATTGATCAAAGGCCAATAGCCCTGGTGACCGATGCAGTTGGTAATGAAGGCAAAGATAAAGGCTCGAGTTAAGAATTCGAGGTAGGATCTTGATGTAAAAGCATGACACTTTCAAGTTCCTTACTGACTTTTGATAGATTTATCCGAAAGTTAATTTTATCTTCCTGGATCTGATGGGAATAATTATTTTTTCCTAGCTAAATGTCCCTTTGGCTGTTTGGACCTGTATTGTTATTTTGTGTATCCAGCATTGATATGTGTATTGACAGCTTTTATTAACACTAAATAGAGAAAAGCTTGAAATTTAATAAAATTTCAGAATTTGCTCGTATATTAGATATTTTTACTCTA

Coding sequence (CDS)

ATGATTTGGAGGAGTTTAGCTTCCACCTCTAACCTCCTTGCTAAATCCTTCGGTTCGGCGAATGGAGCGACGGCGACGAGGGATTTTCGGCGCGCTTACAGCTTGATTCCGATGGTCATTGAACACACATCAAGAGGAGAAAGAGCCTACGATATCTTCTCTCGTCTTCTCAAGGAGCGGATAATTTGCATCAATGGTCCAATTTCTGATGATACTTCTCATGTTGTCGTTGCTCAGCTTCTCTTTCTTGAGTCTGAGAACCCCTCGAAGCCCATCAATATGTACCTCAACTCCCCCGGCGGCGCCGTCACTGCTGGGCTTGCTATATATGATACTATGCAGTATATAAGGTCGCCCATCAACACCATCTGTTTGGGTCAGGCTGCCTCGATGGCTTCTCTTCTTCTAGCTGCTGGTGCCAAGGGTGAGAGACGATCGCTTCCTAATGCAACTATCATGGTTCACCAGCCTTCTGGTGGATATAGTGGGCAAGCGAAGGATATGTCAATTCACACGAAACAGATTGTTCGGGTTTGGGATGCACTAAATGAGCTGTACTCCAAGCATACGTCACAGTCAGTAGAGATTATTCAAAAGTATATGGACAGGGATTATTTTATGACCCCAGAAGAGGCCAAGGAGTTTGGCATAATCGATGAGGTGATTGATCAAAGGCCAATAGCCCTGGTGACCGATGCAGTTGGTAATGAAGGCAAAGATAAAGGCTCGAGTTAA

Protein sequence

MIWRSLASTSNLLAKSFGSANGATATRDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMVHQPSGGYSGQAKDMSIHTKQIVRVWDALNELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGNEGKDKGSS
Homology
[Close]
BLAST of Cp4.1LG03g04850 vs. Swiss-Prot
Match: CLPP2_ARATH (ATP-dependent Clp protease proteolytic subunit 2, mitochondrial OS=Arabidopsis thaliana GN=CLPP2 PE=1 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 4.5e-105
Identity = 192/241 (79.67%), Postives = 215/241 (89.21%), Query Frame = 1 

Query: 4   RSLASTSNLLAKSFGSANGATATRDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIIC 63
           R L S + +L+ +  S   AT+    RR+YSLIPMVIEH+SRGERAYDIFSRLLKERIIC
Sbjct: 3   RGLVSGAKMLSSTPSSM--ATSIATGRRSYSLIPMVIEHSSRGERAYDIFSRLLKERIIC 62

Query: 64  INGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTI 123
           INGPI+DDTSHVVVAQLL+LESENPSKPI+MYLNSPGG VTAGLAIYDTMQYIRSPI+TI
Sbjct: 63  INGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIYDTMQYIRSPISTI 122

Query: 124 CLGQAASMASLLLAAGAKGERRSLPNATIMVHQPSGGYSGQAKDMSIHTKQIVRVWDALN 183
           CLGQAASMASLLLAAGAKG+RRSLPNAT+M+HQPSGGYSGQAKD++IHTKQIVRVWDALN
Sbjct: 123 CLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITIHTKQIVRVWDALN 182

Query: 184 ELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGNEGKDKGS 243
           ELY KHT Q ++++   MDRD+FMTPEEAK FGIIDEVID+RP+ LV DAVGNE KDK S
Sbjct: 183 ELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDERPLELVKDAVGNESKDKSS 241

Query: 244 S 245
           S
Sbjct: 243 S 241

[Close]
BLAST of Cp4.1LG03g04850 vs. Swiss-Prot
Match: CLPP_BARBK (ATP-dependent Clp protease proteolytic subunit OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=clpP PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 3.3e-71
Identity = 130/196 (66.33%), Postives = 159/196 (81.12%), Query Frame = 1 

Query: 30  RRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPS 89
           + A SL+PMV+E T+RGERAYDIFSRLLKERII INGP+ D  + +V AQLLFLE+ENP 
Sbjct: 6   KTALSLVPMVVEQTNRGERAYDIFSRLLKERIIFINGPVEDSMAMLVCAQLLFLEAENPK 65

Query: 90  KPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPN 149
           K I++Y+NSPGG VT+G+AIYDTMQ+IR PI+T+C+GQAASM SLLL AGAKG R SLPN
Sbjct: 66  KEISLYINSPGGVVTSGMAIYDTMQFIRPPISTLCMGQAASMGSLLLTAGAKGHRFSLPN 125

Query: 150 ATIMVHQPSGGYSGQAKDMSIHTKQIVRVWDALNELYSKHTSQSVEIIQKYMDRDYFMTP 209
           A IMVHQPSGG+ GQA D+  H + I+R+   LNE+Y +HT Q  EII+  +DRD+FMT 
Sbjct: 126 ARIMVHQPSGGFQGQASDIERHAQDIIRMKRHLNEIYVQHTGQDYEIIENTLDRDHFMTA 185

Query: 210 EEAKEFGIIDEVIDQR 226
           EEAK FG+ID+VI  R
Sbjct: 186 EEAKMFGLIDDVIQYR 201

[Close]
BLAST of Cp4.1LG03g04850 vs. Swiss-Prot
Match: CLPP_BARQU (ATP-dependent Clp protease proteolytic subunit OS=Bartonella quintana (strain Toulouse) GN=clpP PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 4.3e-71
Identity = 126/196 (64.29%), Postives = 161/196 (82.14%), Query Frame = 1 

Query: 30  RRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPS 89
           + A SL+PMVIE T+RGERAYDIFSRLLKERII INGP+ D  + +V AQLLFLE+ENP 
Sbjct: 6   KTALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDSMAMLVCAQLLFLEAENPK 65

Query: 90  KPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPN 149
           K I++Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASM SLLL AGAKG R +LPN
Sbjct: 66  KEISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPN 125

Query: 150 ATIMVHQPSGGYSGQAKDMSIHTKQIVRVWDALNELYSKHTSQSVEIIQKYMDRDYFMTP 209
           A IMVHQPSGG+ GQA D+  H + I+++   LNE+Y +HT Q  E+I++ +DRD+FMT 
Sbjct: 126 ARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQDYEVIERTLDRDHFMTA 185

Query: 210 EEAKEFGIIDEVIDQR 226
           EEAK+FG++D+VI  R
Sbjct: 186 EEAKQFGLVDDVIQYR 201

[Close]
BLAST of Cp4.1LG03g04850 vs. Swiss-Prot
Match: CLPP_BARHE (ATP-dependent Clp protease proteolytic subunit OS=Bartonella henselae (strain ATCC 49882 / DSM 28221 / Houston 1) GN=clpP PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 5.6e-71
Identity = 125/196 (63.78%), Postives = 162/196 (82.65%), Query Frame = 1 

Query: 30  RRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPS 89
           + A SL+PMVIE T+RGERAYDIFSRLLKERII INGP+ D  + +V AQLLFLE+ENP 
Sbjct: 6   KTALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEAENPK 65

Query: 90  KPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPN 149
           K I++Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASM SLLL AGAKG R +LPN
Sbjct: 66  KEISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPN 125

Query: 150 ATIMVHQPSGGYSGQAKDMSIHTKQIVRVWDALNELYSKHTSQSVEIIQKYMDRDYFMTP 209
           A IMVHQPSGG+ GQA D+  H + I+++   LNE+Y +HT Q+ ++I++ +DRD+FMT 
Sbjct: 126 ARIMVHQPSGGFQGQASDIERHAQDIIKMKQRLNEIYVQHTGQNYDVIERTLDRDHFMTA 185

Query: 210 EEAKEFGIIDEVIDQR 226
           EEAK+FG++D+VI  R
Sbjct: 186 EEAKQFGLVDDVIQYR 201

[Close]
BLAST of Cp4.1LG03g04850 vs. Swiss-Prot
Match: CLPP_BART1 (ATP-dependent Clp protease proteolytic subunit OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=clpP PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.6e-70
Identity = 126/196 (64.29%), Postives = 160/196 (81.63%), Query Frame = 1 

Query: 30  RRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPS 89
           + A SL+PMVIE T+RGERAYDIFSRLLKERII INGP+ D  + +V AQLLFLE+ENP 
Sbjct: 6   KTALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEAENPK 65

Query: 90  KPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPN 149
           K I++Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASM SLLL AGAKG R +LPN
Sbjct: 66  KEISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFALPN 125

Query: 150 ATIMVHQPSGGYSGQAKDMSIHTKQIVRVWDALNELYSKHTSQSVEIIQKYMDRDYFMTP 209
           A IMVHQPSGG+ GQA D+  H + I+++   LNE+Y +HT Q  E+I++ +DRD+FMT 
Sbjct: 126 ARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQGYEVIERTLDRDHFMTA 185

Query: 210 EEAKEFGIIDEVIDQR 226
           EEAK FG++D+VI  R
Sbjct: 186 EEAKAFGLVDDVIHYR 201

[Close]
BLAST of Cp4.1LG03g04850 vs. TrEMBL
Match: A0A0A0LC78_CUCSA (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=Csa_3G653410 PE=3 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 1.3e-122
Identity = 228/242 (94.21%), Postives = 234/242 (96.69%), Query Frame = 1 

Query: 1   MIWRSLASTSNLLA-KSFGSANGATATRDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKE 60
           MIWRSLASTS LLA KS  SA G TA RDFRR YSL+PMVIEHTSRGERAYDIFSRLLKE
Sbjct: 1   MIWRSLASTSMLLAAKSTASACGRTAMRDFRRPYSLVPMVIEHTSRGERAYDIFSRLLKE 60

Query: 61  RIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSP 120
           RIICINGPISDDT+HVVVAQLLFLESENP+KPI+MYLNSPGGAVTAGLAIYDTMQYIRSP
Sbjct: 61  RIICINGPISDDTAHVVVAQLLFLESENPTKPISMYLNSPGGAVTAGLAIYDTMQYIRSP 120

Query: 121 INTICLGQAASMASLLLAAGAKGERRSLPNATIMVHQPSGGYSGQAKDMSIHTKQIVRVW 180
           INTICLGQAASMASLLLAAGAKGERRSLPNATIM+HQPSGGYSGQAKDM+IHTKQIVRVW
Sbjct: 121 INTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVW 180

Query: 181 DALNELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGNEGK 240
           DALNELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGNEGK
Sbjct: 181 DALNELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGNEGK 240

Query: 241 DK 242
           DK
Sbjct: 241 DK 242

[Close]
BLAST of Cp4.1LG03g04850 vs. TrEMBL
Match: A0A0J8BRK0_BETVU (ATP-dependent Clp protease proteolytic subunit OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g202980 PE=3 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 3.6e-109
Identity = 205/244 (84.02%), Postives = 224/244 (91.80%), Query Frame = 1 

Query: 1   MIWRSLASTSNLLAKSFGSANGATATRDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKER 60
           M+  SL   S+L  +S  S+NG  +++  R AYSLIPMVIEH+SRGERAYDIFSRLLKER
Sbjct: 1   MLRTSLTKFSSL--RSLSSSNGLLSSQSCR-AYSLIPMVIEHSSRGERAYDIFSRLLKER 60

Query: 61  IICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPI 120
           IICINGPI+DDT+HVVVAQLL+LESENPSKPI+MYLNSPGGAVTAGLAIYDTMQYIRSPI
Sbjct: 61  IICINGPIADDTAHVVVAQLLYLESENPSKPIHMYLNSPGGAVTAGLAIYDTMQYIRSPI 120

Query: 121 NTICLGQAASMASLLLAAGAKGERRSLPNATIMVHQPSGGYSGQAKDMSIHTKQIVRVWD 180
           NTICLGQAASMASLLLAAG KGERR+LPNAT+MVHQPSGGYSGQAKDM+IHTKQIVRVWD
Sbjct: 121 NTICLGQAASMASLLLAAGTKGERRALPNATVMVHQPSGGYSGQAKDMTIHTKQIVRVWD 180

Query: 181 ALNELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGNEGKD 240
           +LNELYSKHT Q V+ IQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALV+DAV NE KD
Sbjct: 181 SLNELYSKHTGQPVDNIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVSDAVANEDKD 240

Query: 241 KGSS 245
           KGS+
Sbjct: 241 KGSN 241

[Close]
BLAST of Cp4.1LG03g04850 vs. TrEMBL
Match: M5XT83_PRUPE (ATP-dependent Clp protease proteolytic subunit OS=Prunus persica GN=PRUPE_ppa010637mg PE=3 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 5.2e-108
Identity = 195/214 (91.12%), Postives = 208/214 (97.20%), Query Frame = 1 

Query: 31  RAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSK 90
           R+YSLIPMVIEH+SRGERAYDIFSRLLKERI+CINGPI+DDT+HVVVAQLLFLESENPSK
Sbjct: 27  RSYSLIPMVIEHSSRGERAYDIFSRLLKERIVCINGPINDDTAHVVVAQLLFLESENPSK 86

Query: 91  PINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNA 150
           PINMYLNSPGG VTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNA
Sbjct: 87  PINMYLNSPGGHVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNA 146

Query: 151 TIMVHQPSGGYSGQAKDMSIHTKQIVRVWDALNELYSKHTSQSVEIIQKYMDRDYFMTPE 210
           T+M+HQPSGGYSGQAKDM+IHTKQIVRVWD+LN LYSKHT QSVEIIQK MDRDYFMTPE
Sbjct: 147 TVMIHQPSGGYSGQAKDMTIHTKQIVRVWDSLNALYSKHTGQSVEIIQKNMDRDYFMTPE 206

Query: 211 EAKEFGIIDEVIDQRPIALVTDAVGNEGKDKGSS 245
           EAKEFGIIDEV+D+RP+ALVTDAVGNEGK+K  S
Sbjct: 207 EAKEFGIIDEVMDERPVALVTDAVGNEGKEKDKS 240

[Close]
BLAST of Cp4.1LG03g04850 vs. TrEMBL
Match: A5AL82_VITVI (ATP-dependent Clp protease proteolytic subunit OS=Vitis vinifera GN=VITISV_024612 PE=3 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 1.5e-107
Identity = 192/214 (89.72%), Postives = 210/214 (98.13%), Query Frame = 1 

Query: 31  RAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSK 90
           R+Y+LIPMVIEH+SRGERAYDIFSRLLKERI+CINGPISDDT+HVVVAQLLFLESENPSK
Sbjct: 6   RSYALIPMVIEHSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSK 65

Query: 91  PINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNA 150
           PI+MYLNSPGGAV+AGLAIYDTMQYIRSP+NTICLGQAASM SLLLAAGAKGERR+LPNA
Sbjct: 66  PIHMYLNSPGGAVSAGLAIYDTMQYIRSPVNTICLGQAASMGSLLLAAGAKGERRALPNA 125

Query: 151 TIMVHQPSGGYSGQAKDMSIHTKQIVRVWDALNELYSKHTSQSVEIIQKYMDRDYFMTPE 210
           TIM+HQPSGGYSGQAKDM+IHTKQI+RVWD+LN LY+KHT QS++IIQK MDRDYFMTPE
Sbjct: 126 TIMIHQPSGGYSGQAKDMTIHTKQIIRVWDSLNALYAKHTGQSLDIIQKNMDRDYFMTPE 185

Query: 211 EAKEFGIIDEVIDQRPIALVTDAVGNEGKDKGSS 245
           EAKEFGIIDEVIDQRP+ALVTDAVGNEGKDKGS+
Sbjct: 186 EAKEFGIIDEVIDQRPMALVTDAVGNEGKDKGSN 219

[Close]
BLAST of Cp4.1LG03g04850 vs. TrEMBL
Match: A0A059BG26_EUCGR (ATP-dependent Clp protease proteolytic subunit OS=Eucalyptus grandis GN=EUGRSUZ_G02574 PE=3 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 2.0e-107
Identity = 202/254 (79.53%), Postives = 220/254 (86.61%), Query Frame = 1 

Query: 1   MIWRSLASTSNLLAKSFGSANGATATRDF----------RRAYSLIPMVIEHTSRGERAY 60
           M+ R   STS LL+ + G    A A              RR+YSLIPMVIEH+SRGERAY
Sbjct: 5   MLKRGSISTSRLLSSAAGRGPAAAAAAALGPAGAAAAAARRSYSLIPMVIEHSSRGERAY 64

Query: 61  DIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIY 120
           DIFSRLLKERI+CINGPISDDT+HVVVAQLLFLESENPSKPI+MYLNSPGGAVTAGLAIY
Sbjct: 65  DIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGAVTAGLAIY 124

Query: 121 DTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMVHQPSGGYSGQAKDMSI 180
           DTMQYI+SPINTICLGQAASM SLLL+AGAKGERRSLPNATIM+HQPSGGYSGQAKDM+I
Sbjct: 125 DTMQYIKSPINTICLGQAASMGSLLLSAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTI 184

Query: 181 HTKQIVRVWDALNELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALV 240
           HTKQI+RVWD+LN LY+KHT QSV++IQK MDRDYFMTP EAKEFGIIDEVIDQRPIALV
Sbjct: 185 HTKQIIRVWDSLNALYAKHTGQSVDVIQKNMDRDYFMTPGEAKEFGIIDEVIDQRPIALV 244

Query: 241 TDAVGNEGKDKGSS 245
           TDAVG+EGKD   S
Sbjct: 245 TDAVGHEGKDTDKS 258

[Close]
BLAST of Cp4.1LG03g04850 vs. TAIR10
Match: AT5G23140.1 (AT5G23140.1 nuclear-encoded CLP protease P7)

HSP 1 Score: 382.1 bits (980), Expect = 2.6e-106
Identity = 192/241 (79.67%), Postives = 215/241 (89.21%), Query Frame = 1 

Query: 4   RSLASTSNLLAKSFGSANGATATRDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIIC 63
           R L S + +L+ +  S   AT+    RR+YSLIPMVIEH+SRGERAYDIFSRLLKERIIC
Sbjct: 3   RGLVSGAKMLSSTPSSM--ATSIATGRRSYSLIPMVIEHSSRGERAYDIFSRLLKERIIC 62

Query: 64  INGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTI 123
           INGPI+DDTSHVVVAQLL+LESENPSKPI+MYLNSPGG VTAGLAIYDTMQYIRSPI+TI
Sbjct: 63  INGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIYDTMQYIRSPISTI 122

Query: 124 CLGQAASMASLLLAAGAKGERRSLPNATIMVHQPSGGYSGQAKDMSIHTKQIVRVWDALN 183
           CLGQAASMASLLLAAGAKG+RRSLPNAT+M+HQPSGGYSGQAKD++IHTKQIVRVWDALN
Sbjct: 123 CLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITIHTKQIVRVWDALN 182

Query: 184 ELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGNEGKDKGS 243
           ELY KHT Q ++++   MDRD+FMTPEEAK FGIIDEVID+RP+ LV DAVGNE KDK S
Sbjct: 183 ELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDERPLELVKDAVGNESKDKSS 241

Query: 244 S 245
           S
Sbjct: 243 S 241

[Close]
BLAST of Cp4.1LG03g04850 vs. TAIR10
Match: AT1G02560.1 (AT1G02560.1 nuclear encoded CLP protease 5)

HSP 1 Score: 179.9 bits (455), Expect = 1.9e-45
Identity = 88/176 (50.00%), Postives = 127/176 (72.16%), Query Frame = 1 

Query: 47  ERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAG 106
           ER   I S+L + RII   G + DD ++++VAQLL+L++ +P+K I MY+NSPGG+VTAG
Sbjct: 110 ERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAG 169

Query: 107 LAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMVHQPSGGYSGQAK 166
           +AI+DTM++IR  ++T+C+G AASM + LL+AG KG+R SLPN+ IM+HQP GG  G   
Sbjct: 170 MAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQT 229

Query: 167 DMSIHTKQIVRVWDALNELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIIDEVI 223
           D+ I   +++     LN   + HT QS+E I +  DRD+FM+ +EAKE+G+ID VI
Sbjct: 230 DIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 285

[Close]
BLAST of Cp4.1LG03g04850 vs. TAIR10
Match: AT5G45390.1 (AT5G45390.1 CLP protease P4)

HSP 1 Score: 162.2 bits (409), Expect = 4.2e-40
Identity = 80/183 (43.72%), Postives = 126/183 (68.85%), Query Frame = 1 

Query: 41  EHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPG 100
           E   RG  + D+   LL+ERI+ +   I D  +  +++QLL L++++P K I +++NSPG
Sbjct: 70  ESAIRGAES-DVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPG 129

Query: 101 GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMVHQPSGG 160
           G+++A +AIYD +Q +R+ ++TI LG AAS AS++L AG KG+R ++PN  IM+HQP GG
Sbjct: 130 GSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGG 189

Query: 161 YSGQAKDMSIHTKQIVRVWDALNELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIIDE 220
            SGQA D+ I  K+++   + +  + +  TS+S E + K +DRD +M+P EA E+G+ID 
Sbjct: 190 ASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDG 249

Query: 221 VID 224
           VID
Sbjct: 250 VID 251

[Close]
BLAST of Cp4.1LG03g04850 vs. TAIR10
Match: AT1G66670.1 (AT1G66670.1 CLP protease proteolytic subunit 3)

HSP 1 Score: 160.6 bits (405), Expect = 1.2e-39
Identity = 74/180 (41.11%), Postives = 124/180 (68.89%), Query Frame = 1 

Query: 51  DIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIY 110
           D  + LL++RI+ +   + D T+ +V++QLL L++E+  + I +++NSPGG++TAG+ IY
Sbjct: 85  DTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIY 144

Query: 111 DTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMVHQPSGGYSGQAKDMSI 170
           D M+  ++ ++T+CLG AASM + LLA+G+KG+R  +PN+ +M+HQP G   G+A +MSI
Sbjct: 145 DAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSI 204

Query: 171 HTKQIVRVWDALNELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALV 230
             ++++     LN+++S+ T +    I+   DRD F+ P EAKE+G+ID VID     L+
Sbjct: 205 RIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGKPGLI 264

[Close]
BLAST of Cp4.1LG03g04850 vs. TAIR10
Match: AT4G17040.1 (AT4G17040.1 CLP protease R subunit 4)

HSP 1 Score: 140.6 bits (353), Expect = 1.3e-33
Identity = 74/180 (41.11%), Postives = 110/180 (61.11%), Query Frame = 1 

Query: 51  DIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPG--------GA 110
           D+ S L K RI+ +   +    + +++A+ L+L+ E+  KPI +Y+NS G        G 
Sbjct: 105 DLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGY 164

Query: 111 VTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMVHQPSGGYS 170
            T   AIYD M Y++ PI T+C+G A   A+LLL AGAKG R +LP++TIM+ QP   + 
Sbjct: 165 DTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQ 224

Query: 171 GQAKDMSIHTKQIVRVWDALNELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIIDEVI 223
           GQA D+ I  K+I  +   + +LYSKH  +S E I+  M R  + +P EA E+GIID+V+
Sbjct: 225 GQATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVV 284

[Close]
BLAST of Cp4.1LG03g04850 vs. NCBI nr
Match: gi|659123800|ref|XP_008461846.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Cucumis melo])

HSP 1 Score: 452.6 bits (1163), Expect = 4.4e-124
Identity = 230/242 (95.04%), Postives = 236/242 (97.52%), Query Frame = 1 

Query: 1   MIWRSLASTSNLLA-KSFGSANGATATRDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKE 60
           MIWRSLASTS LLA KS  SA+G TA RDFRRAYSL+PMVIEHTSRGERAYDIFSRLLKE
Sbjct: 1   MIWRSLASTSMLLAAKSTASASGRTAMRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKE 60

Query: 61  RIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSP 120
           RIICINGPISDDT+HVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSP
Sbjct: 61  RIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSP 120

Query: 121 INTICLGQAASMASLLLAAGAKGERRSLPNATIMVHQPSGGYSGQAKDMSIHTKQIVRVW 180
           INTICLGQAASMASLLLAAGAKGERRSLPNATIM+HQPSGGYSGQAKDM+IHTKQIVRVW
Sbjct: 121 INTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVW 180

Query: 181 DALNELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGNEGK 240
           DALNELYSKHTSQSV+IIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGNEGK
Sbjct: 181 DALNELYSKHTSQSVDIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGNEGK 240

Query: 241 DK 242
           DK
Sbjct: 241 DK 242

[Close]
BLAST of Cp4.1LG03g04850 vs. NCBI nr
Match: gi|449461681|ref|XP_004148570.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Cucumis sativus])

HSP 1 Score: 447.2 bits (1149), Expect = 1.8e-122
Identity = 228/242 (94.21%), Postives = 234/242 (96.69%), Query Frame = 1 

Query: 1   MIWRSLASTSNLLA-KSFGSANGATATRDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKE 60
           MIWRSLASTS LLA KS  SA G TA RDFRR YSL+PMVIEHTSRGERAYDIFSRLLKE
Sbjct: 1   MIWRSLASTSMLLAAKSTASACGRTAMRDFRRPYSLVPMVIEHTSRGERAYDIFSRLLKE 60

Query: 61  RIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSP 120
           RIICINGPISDDT+HVVVAQLLFLESENP+KPI+MYLNSPGGAVTAGLAIYDTMQYIRSP
Sbjct: 61  RIICINGPISDDTAHVVVAQLLFLESENPTKPISMYLNSPGGAVTAGLAIYDTMQYIRSP 120

Query: 121 INTICLGQAASMASLLLAAGAKGERRSLPNATIMVHQPSGGYSGQAKDMSIHTKQIVRVW 180
           INTICLGQAASMASLLLAAGAKGERRSLPNATIM+HQPSGGYSGQAKDM+IHTKQIVRVW
Sbjct: 121 INTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVW 180

Query: 181 DALNELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGNEGK 240
           DALNELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGNEGK
Sbjct: 181 DALNELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGNEGK 240

Query: 241 DK 242
           DK
Sbjct: 241 DK 242

[Close]
BLAST of Cp4.1LG03g04850 vs. NCBI nr
Match: gi|731354616|ref|XP_010688696.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 402.5 bits (1033), Expect = 5.2e-109
Identity = 205/244 (84.02%), Postives = 224/244 (91.80%), Query Frame = 1 

Query: 1   MIWRSLASTSNLLAKSFGSANGATATRDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKER 60
           M+  SL   S+L  +S  S+NG  +++  R AYSLIPMVIEH+SRGERAYDIFSRLLKER
Sbjct: 1   MLRTSLTKFSSL--RSLSSSNGLLSSQSCR-AYSLIPMVIEHSSRGERAYDIFSRLLKER 60

Query: 61  IICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPI 120
           IICINGPI+DDT+HVVVAQLL+LESENPSKPI+MYLNSPGGAVTAGLAIYDTMQYIRSPI
Sbjct: 61  IICINGPIADDTAHVVVAQLLYLESENPSKPIHMYLNSPGGAVTAGLAIYDTMQYIRSPI 120

Query: 121 NTICLGQAASMASLLLAAGAKGERRSLPNATIMVHQPSGGYSGQAKDMSIHTKQIVRVWD 180
           NTICLGQAASMASLLLAAG KGERR+LPNAT+MVHQPSGGYSGQAKDM+IHTKQIVRVWD
Sbjct: 121 NTICLGQAASMASLLLAAGTKGERRALPNATVMVHQPSGGYSGQAKDMTIHTKQIVRVWD 180

Query: 181 ALNELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGNEGKD 240
           +LNELYSKHT Q V+ IQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALV+DAV NE KD
Sbjct: 181 SLNELYSKHTGQPVDNIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVSDAVANEDKD 240

Query: 241 KGSS 245
           KGS+
Sbjct: 241 KGSN 241

[Close]
BLAST of Cp4.1LG03g04850 vs. NCBI nr
Match: gi|697156708|ref|XP_009587106.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial-like [Nicotiana tomentosiformis])

HSP 1 Score: 399.4 bits (1025), Expect = 4.4e-108
Identity = 199/215 (92.56%), Postives = 207/215 (96.28%), Query Frame = 1 

Query: 30  RRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPS 89
           RR Y LIPMVIEH+SRGERAYDIFSRLLKERIICINGPI+DDTSHVVVAQLLFLESENPS
Sbjct: 23  RRWYGLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTSHVVVAQLLFLESENPS 82

Query: 90  KPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPN 149
           KPI+MYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPN
Sbjct: 83  KPIHMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPN 142

Query: 150 ATIMVHQPSGGYSGQAKDMSIHTKQIVRVWDALNELYSKHTSQSVEIIQKYMDRDYFMTP 209
           ATIM+HQPSGGYSGQAKDM+IHTKQIVRVWDALN+LYSKHT Q VEIIQK MDRDYFMT 
Sbjct: 143 ATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNQLYSKHTGQPVEIIQKNMDRDYFMTA 202

Query: 210 EEAKEFGIIDEVIDQRPIALVTDAVGNEGKDKGSS 245
           EEAKEFGIIDEVIDQRP+ALVTDA+ NE KDKGSS
Sbjct: 203 EEAKEFGIIDEVIDQRPMALVTDAIANEAKDKGSS 237

[Close]
BLAST of Cp4.1LG03g04850 vs. NCBI nr
Match: gi|596298831|ref|XP_007227557.1| (hypothetical protein PRUPE_ppa010637mg [Prunus persica])

HSP 1 Score: 398.7 bits (1023), Expect = 7.5e-108
Identity = 195/214 (91.12%), Postives = 208/214 (97.20%), Query Frame = 1 

Query: 31  RAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSK 90
           R+YSLIPMVIEH+SRGERAYDIFSRLLKERI+CINGPI+DDT+HVVVAQLLFLESENPSK
Sbjct: 27  RSYSLIPMVIEHSSRGERAYDIFSRLLKERIVCINGPINDDTAHVVVAQLLFLESENPSK 86

Query: 91  PINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNA 150
           PINMYLNSPGG VTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNA
Sbjct: 87  PINMYLNSPGGHVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNA 146

Query: 151 TIMVHQPSGGYSGQAKDMSIHTKQIVRVWDALNELYSKHTSQSVEIIQKYMDRDYFMTPE 210
           T+M+HQPSGGYSGQAKDM+IHTKQIVRVWD+LN LYSKHT QSVEIIQK MDRDYFMTPE
Sbjct: 147 TVMIHQPSGGYSGQAKDMTIHTKQIVRVWDSLNALYSKHTGQSVEIIQKNMDRDYFMTPE 206

Query: 211 EAKEFGIIDEVIDQRPIALVTDAVGNEGKDKGSS 245
           EAKEFGIIDEV+D+RP+ALVTDAVGNEGK+K  S
Sbjct: 207 EAKEFGIIDEVMDERPVALVTDAVGNEGKEKDKS 240

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g04850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CLPP2_ARATH4.5e-10579.67ATP-dependent Clp protease proteolytic subunit 2, mitochondrial OS=Arabidopsis t... [more]
CLPP_BARBK3.3e-7166.33ATP-dependent Clp protease proteolytic subunit OS=Bartonella bacilliformis (stra... [more]
CLPP_BARQU4.3e-7164.29ATP-dependent Clp protease proteolytic subunit OS=Bartonella quintana (strain To... [more]
CLPP_BARHE5.6e-7163.78ATP-dependent Clp protease proteolytic subunit OS=Bartonella henselae (strain AT... [more]
CLPP_BART11.6e-7064.29ATP-dependent Clp protease proteolytic subunit OS=Bartonella tribocorum (strain ... [more]
BLAST of Cp4.1LG03g04850 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LC78_CUCSA1.3e-12294.21ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=Csa_3G65341... [more]
A0A0J8BRK0_BETVU3.6e-10984.02ATP-dependent Clp protease proteolytic subunit OS=Beta vulgaris subsp. vulgaris ... [more]
M5XT83_PRUPE5.2e-10891.12ATP-dependent Clp protease proteolytic subunit OS=Prunus persica GN=PRUPE_ppa010... [more]
A5AL82_VITVI1.5e-10789.72ATP-dependent Clp protease proteolytic subunit OS=Vitis vinifera GN=VITISV_02461... [more]
A0A059BG26_EUCGR2.0e-10779.53ATP-dependent Clp protease proteolytic subunit OS=Eucalyptus grandis GN=EUGRSUZ_... [more]
BLAST of Cp4.1LG03g04850 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G23140.12.6e-10679.67 nuclear-encoded CLP protease P7[more]
AT1G02560.11.9e-4550.00 nuclear encoded CLP protease 5[more]
AT5G45390.14.2e-4043.72 CLP protease P4[more]
AT1G66670.11.2e-3941.11 CLP protease proteolytic subunit 3[more]
AT4G17040.11.3e-3341.11 CLP protease R subunit 4[more]
BLAST of Cp4.1LG03g04850 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659123800|ref|XP_008461846.1|4.4e-12495.04PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Cucu... [more]
gi|449461681|ref|XP_004148570.1|1.8e-12294.21PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Cucu... [more]
gi|731354616|ref|XP_010688696.1|5.2e-10984.02PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Beta... [more]
gi|697156708|ref|XP_009587106.1|4.4e-10892.56PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial-like ... [more]
gi|596298831|ref|XP_007227557.1|7.5e-10891.12hypothetical protein PRUPE_ppa010637mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: INTERPRO
TermDefinition
IPR023562ClpP/TepA
IPR018215ClpP_Ser_AS
IPR001907ClpP
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0006508 proteolysis
cellular_component GO:0009840 chloroplastic endopeptidase Clp complex
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0044434 chloroplast part
cellular_component GO:0009532 plastid stroma
cellular_component GO:0005575 cellular_component
molecular_function GO:0050897 cobalt ion binding
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0046914 transition metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g04850.1Cp4.1LG03g04850.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001907ATP-dependent Clp protease proteolytic subunitPRINTSPR00127CLPPROTEASEPcoord: 200..219
score: 9.4E-46coord: 143..162
score: 9.4E-46coord: 51..66
score: 9.4E-46coord: 91..111
score: 9.4E-46coord: 122..139
score: 9.4
IPR001907ATP-dependent Clp protease proteolytic subunitHAMAPMF_00444ClpPcoord: 35..225
score: 39
IPR018215ClpP, Ser active sitePROSITEPS00381CLP_PROTEASE_SERcoord: 122..133
scor
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPANTHERPTHR10381ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNITcoord: 30..244
score: 2.5E
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPFAMPF00574CLP_proteasecoord: 44..224
score: 2.7
NoneNo IPR availablePANTHERPTHR10381:SF11ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT, MITOCHONDRIAL-RELATEDcoord: 30..244
score: 2.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g04850Cucsa.192270Cucumber (Gy14) v1cgycpeB0540
Cp4.1LG03g04850CmaCh14G009720Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g04850CmaCh01G002510Cucurbita maxima (Rimu)cmacpeB494
Cp4.1LG03g04850CmoCh01G002610Cucurbita moschata (Rifu)cmocpeB453
Cp4.1LG03g04850CmoCh14G009950Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g04850Cla017308Watermelon (97103) v1cpewmB595
Cp4.1LG03g04850Csa3G653410Cucumber (Chinese Long) v2cpecuB612
Cp4.1LG03g04850MELO3C024021Melon (DHL92) v3.5.1cpemeB566
Cp4.1LG03g04850ClCG10G011980Watermelon (Charleston Gray)cpewcgB544
Cp4.1LG03g04850CSPI03G28990Wild cucumber (PI 183967)cpecpiB614
Cp4.1LG03g04850Lsi03G011690Bottle gourd (USVL1VR-Ls)cpelsiB500
Cp4.1LG03g04850MELO3C024021.2Melon (DHL92) v3.6.1cpemedB673
Cp4.1LG03g04850CsaV3_3G031380Cucumber (Chinese Long) v3cpecucB0762
Cp4.1LG03g04850Bhi11G001136Wax gourdcpewgoB0742
Cp4.1LG03g04850CsGy3G026880Cucumber (Gy14) v2cgybcpeB409
Cp4.1LG03g04850Carg11195Silver-seed gourdcarcpeB1147
Cp4.1LG03g04850Carg07344Silver-seed gourdcarcpeB1073
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g04850Cp4.1LG02g15890Cucurbita pepo (Zucchini)cpecpeB449
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g04850Wax gourdcpewgoB0819
Cp4.1LG03g04850Cucurbita pepo (Zucchini)cpecpeB185
Cp4.1LG03g04850Cucurbita pepo (Zucchini)cpecpeB336
Cp4.1LG03g04850Cucumber (Gy14) v1cgycpeB0337
Cp4.1LG03g04850Cucumber (Gy14) v1cgycpeB0539
Cp4.1LG03g04850Cucurbita maxima (Rimu)cmacpeB404
Cp4.1LG03g04850Cucurbita maxima (Rimu)cmacpeB927
Cp4.1LG03g04850Cucurbita moschata (Rifu)cmocpeB367
Cp4.1LG03g04850Cucurbita moschata (Rifu)cmocpeB861
Cp4.1LG03g04850Wild cucumber (PI 183967)cpecpiB601
Cp4.1LG03g04850Wild cucumber (PI 183967)cpecpiB637
Cp4.1LG03g04850Cucumber (Chinese Long) v2cpecuB599
Cp4.1LG03g04850Cucumber (Chinese Long) v2cpecuB633
Cp4.1LG03g04850Bottle gourd (USVL1VR-Ls)cpelsiB494
Cp4.1LG03g04850Watermelon (Charleston Gray)cpewcgB543
Cp4.1LG03g04850Watermelon (97103) v1cpewmB594
Cp4.1LG03g04850Melon (DHL92) v3.5.1cpemeB559
Cp4.1LG03g04850Cucumber (Gy14) v2cgybcpeB396
Cp4.1LG03g04850Cucumber (Gy14) v2cgybcpeB957
Cp4.1LG03g04850Melon (DHL92) v3.6.1cpemedB665
Cp4.1LG03g04850Silver-seed gourdcarcpeB0164
Cp4.1LG03g04850Silver-seed gourdcarcpeB0634
Cp4.1LG03g04850Cucumber (Chinese Long) v3cpecucB0748
Cp4.1LG03g04850Cucumber (Chinese Long) v3cpecucB0789