CmaCh01G002510 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh01G002510
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionATP-dependent Clp protease proteolytic subunit
LocationCma_Chr01 : 1155200 .. 1156822 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGGAGCGGGAGGGGAAGGGAAGGGAAGGGAGAAGAAGCTCTCAAATCTGGAGGCTGAAGTTTGAAGCTGATAAACCCTCGATTACAATCCCAACAATCGAGTCAATTGGCCATGATTTGGAGGAGCTTAGCTTCGACCTCCTCAATGCTGTTAGCTAAATCCACGGGATTGGCGAACGGAAGAACGGCGGCGAGGGATTTTCGTCGCGCTTACAGCTTGATTCCGATGGTGATAGAACACACATCGAGGGGCGAAAGAGCATACGATATCTTCTCTCGTCTTCTTAAGGAGCGTATAATTTGCATCAATGGCCCTATTTCAGATGATACTGCTCATGTCGTCGTTGCTCAGCTCCTTTTTCTCGAGTCGGAGAACCCCTCGAAGCCCATCAACATGTACCTCAACTCCCCCGGCGGCGCCGTCACTGCCGGTATAATAGAAAGCTACACTTACTAATTCAAGATTTTCATTGTTTTGTGCATTATCATGACGTATACCAGTTTTTTAATTCCTCATTTCTGACTCTGAGAATCTCGTTTAGAGTATGAACAAATAATTAAATTGGGTAAATGGGTGATTTAACATAATATAAAGTGGGAGATTATCATTAAATATACGGTATTCTATAGGTTTAATCTTTTGAGTTTTGAATTTTTGGTCTTGTTCTAGTTACACATGCACATATACTACTTTTAATTCGTATTATTTTCTCCCAATTTGAGGTTTGTTGACAAGAAAACGAAAGGATTTCAAACTATTTCAGTTCACTGATTATGAAACTTGGCTAATCTCACATTGGAAGTCTATACTTCCCTTCCCCTCATAATGTTAATATTCACTGTCTATTACCTCGGTAGACTTCAAATTTCATTTGTGTTCAAAGATTATAATCATGAACTTCGTTCCAAGGGCCAACCTTTCCTGCTTGGAAGATTCGAGGTTGCTGAATTTGATAGAATATTTGTGATATATTTACAGGGCTAGCTATATATGATACTATGCAGTATATAAGGTCGCCCATCAATACCATCTGTTTGGGTCAGGCTGCTTCAATGGCTTCTCTTCTTCTAGCTGCTGGTGCCAAGGGTGAGAGACGATCGCTTCCTAATGCAACTATCATGATTCACCAGCCTTCTGGTGGATACAGTGGGCAAGCAAAGGACATAACGATTCACACGAAACAGATCGTTCGGGTTTGGGATGCACTTAACGAGCTGTACTCCAAGCATACGTCACAACCAGTAGATACTATCAAAGAGTATATGGATAGGGATTATTTCATGACCCCAGAAGAGGCCAAAGAGTTTGGCATTATCGACGAGGTAATGGATCAAAGGCCAATAGCTCTGGTGACTGATGCAGTTGGTACTCAAGGCAAGGATAAAGGTTCAAATTAAGAATGCGAGGTAGGATTATGACGCGAAAGCGTGGCATTTCAAAGTTCCATACTGACTTTTGTTAGAATTCTCTAAAAGCTGATCATATCTACCTAGATGTGATGGAATTGATTGTTTTTCTTAGCTAAATGTCCATTTAGCTGTTTGGATCAGTATTGTTATTAGCATTTCAAAGAGAAAAGCTTGAAATTTAATAGAATTTCAAATTTTGCTCGTACGACAACA

mRNA sequence

AGGGAGCGGGAGGGGAAGGGAAGGGAAGGGAGAAGAAGCTCTCAAATCTGGAGGCTGAAGTTTGAAGCTGATAAACCCTCGATTACAATCCCAACAATCGAGTCAATTGGCCATGATTTGGAGGAGCTTAGCTTCGACCTCCTCAATGCTGTTAGCTAAATCCACGGGATTGGCGAACGGAAGAACGGCGGCGAGGGATTTTCGTCGCGCTTACAGCTTGATTCCGATGGTGATAGAACACACATCGAGGGGCGAAAGAGCATACGATATCTTCTCTCGTCTTCTTAAGGAGCGTATAATTTGCATCAATGGCCCTATTTCAGATGATACTGCTCATGTCGTCGTTGCTCAGCTCCTTTTTCTCGAGTCGGAGAACCCCTCGAAGCCCATCAACATGTACCTCAACTCCCCCGGCGGCGCCGTCACTGCCGGGCTAGCTATATATGATACTATGCAGTATATAAGGTCGCCCATCAATACCATCTGTTTGGGTCAGGCTGCTTCAATGGCTTCTCTTCTTCTAGCTGCTGGTGCCAAGGGTGAGAGACGATCGCTTCCTAATGCAACTATCATGATTCACCAGCCTTCTGGTGGATACAGTGGGCAAGCAAAGGACATAACGATTCACACGAAACAGATCGTTCGGGTTTGGGATGCACTTAACGAGCTGTACTCCAAGCATACGTCACAACCAGTAGATACTATCAAAGAGTATATGGATAGGGATTATTTCATGACCCCAGAAGAGGCCAAAGAGTTTGGCATTATCGACGAGGTAATGGATCAAAGGCCAATAGCTCTGGTGACTGATGCAGTTGGTACTCAAGGCAAGGATAAAGGTTCAAATTAAGAATGCGAGGTAGGATTATGACGCGAAAGCGTGGCATTTCAAAGTTCCATACTGACTTTTGTTAGAATTCTCTAAAAGCTGATCATATCTACCTAGATGTGATGGAATTGATTGTTTTTCTTAGCTAAATGTCCATTTAGCTGTTTGGATCAGTATTGTTATTAGCATTTCAAAGAGAAAAGCTTGAAATTTAATAGAATTTCAAATTTTGCTCGTACGACAACA

Coding sequence (CDS)

ATGATTTGGAGGAGCTTAGCTTCGACCTCCTCAATGCTGTTAGCTAAATCCACGGGATTGGCGAACGGAAGAACGGCGGCGAGGGATTTTCGTCGCGCTTACAGCTTGATTCCGATGGTGATAGAACACACATCGAGGGGCGAAAGAGCATACGATATCTTCTCTCGTCTTCTTAAGGAGCGTATAATTTGCATCAATGGCCCTATTTCAGATGATACTGCTCATGTCGTCGTTGCTCAGCTCCTTTTTCTCGAGTCGGAGAACCCCTCGAAGCCCATCAACATGTACCTCAACTCCCCCGGCGGCGCCGTCACTGCCGGGCTAGCTATATATGATACTATGCAGTATATAAGGTCGCCCATCAATACCATCTGTTTGGGTCAGGCTGCTTCAATGGCTTCTCTTCTTCTAGCTGCTGGTGCCAAGGGTGAGAGACGATCGCTTCCTAATGCAACTATCATGATTCACCAGCCTTCTGGTGGATACAGTGGGCAAGCAAAGGACATAACGATTCACACGAAACAGATCGTTCGGGTTTGGGATGCACTTAACGAGCTGTACTCCAAGCATACGTCACAACCAGTAGATACTATCAAAGAGTATATGGATAGGGATTATTTCATGACCCCAGAAGAGGCCAAAGAGTTTGGCATTATCGACGAGGTAATGGATCAAAGGCCAATAGCTCTGGTGACTGATGCAGTTGGTACTCAAGGCAAGGATAAAGGTTCAAATTAA

Protein sequence

MIWRSLASTSSMLLAKSTGLANGRTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYSKHTSQPVDTIKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGTQGKDKGSN
Homology
[Close]
BLAST of CmaCh01G002510 vs. Swiss-Prot
Match: CLPP2_ARATH (ATP-dependent Clp protease proteolytic subunit 2, mitochondrial OS=Arabidopsis thaliana GN=CLPP2 PE=1 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 3.5e-105
Identity = 192/242 (79.34%), Postives = 214/242 (88.43%), Query Frame = 1 

Query: 4   RSLASTSSMLLAKSTGLANGRTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERII 63
           R L S + ML +  + +A   T+    RR+YSLIPMVIEH+SRGERAYDIFSRLLKERII
Sbjct: 3   RGLVSGAKMLSSTPSSMA---TSIATGRRSYSLIPMVIEHSSRGERAYDIFSRLLKERII 62

Query: 64  CINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINT 123
           CINGPI+DDT+HVVVAQLL+LESENPSKPI+MYLNSPGG VTAGLAIYDTMQYIRSPI+T
Sbjct: 63  CINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIYDTMQYIRSPIST 122

Query: 124 ICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDITIHTKQIVRVWDAL 183
           ICLGQAASMASLLLAAGAKG+RRSLPNAT+MIHQPSGGYSGQAKDITIHTKQIVRVWDAL
Sbjct: 123 ICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITIHTKQIVRVWDAL 182

Query: 184 NELYSKHTSQPVDTIKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGTQGKDKG 243
           NELY KHT QP+D +   MDRD+FMTPEEAK FGIIDEV+D+RP+ LV DAVG + KDK 
Sbjct: 183 NELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDERPLELVKDAVGNESKDKS 241

Query: 244 SN 246
           S+
Sbjct: 243 SS 241

[Close]
BLAST of CmaCh01G002510 vs. Swiss-Prot
Match: CLPP_BARHE (ATP-dependent Clp protease proteolytic subunit OS=Bartonella henselae (strain ATCC 49882 / DSM 28221 / Houston 1) GN=clpP PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 9.6e-71
Identity = 126/196 (64.29%), Postives = 159/196 (81.12%), Query Frame = 1 

Query: 31  RRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPS 90
           + A SL+PMVIE T+RGERAYDIFSRLLKERII INGP+ D  A +V AQLLFLE+ENP 
Sbjct: 6   KTALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEAENPK 65

Query: 91  KPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPN 150
           K I++Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASM SLLL AGAKG R +LPN
Sbjct: 66  KEISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPN 125

Query: 151 ATIMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYSKHTSQPVDTIKEYMDRDYFMTP 210
           A IM+HQPSGG+ GQA DI  H + I+++   LNE+Y +HT Q  D I+  +DRD+FMT 
Sbjct: 126 ARIMVHQPSGGFQGQASDIERHAQDIIKMKQRLNEIYVQHTGQNYDVIERTLDRDHFMTA 185

Query: 211 EEAKEFGIIDEVMDQR 227
           EEAK+FG++D+V+  R
Sbjct: 186 EEAKQFGLVDDVIQYR 201

[Close]
BLAST of CmaCh01G002510 vs. Swiss-Prot
Match: CLPP_PELTS (ATP-dependent Clp protease proteolytic subunit OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=clpP PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.3e-70
Identity = 126/192 (65.62%), Postives = 160/192 (83.33%), Query Frame = 1 

Query: 35  SLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPIN 94
           +L+P+V+E T+RGERAYDI+SRLLK+RII + GPI D+TA++++AQ+LFLE+E+P K I 
Sbjct: 2   NLVPIVVEQTNRGERAYDIYSRLLKDRIIFLGGPIDDNTANLIIAQMLFLEAEDPEKDIQ 61

Query: 95  MYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIM 154
            Y+NSPGG VTAG+AIYDTMQY+RSP+ TIC+GQAASMASLLLAAGAKG+R SLP A I+
Sbjct: 62  FYINSPGGVVTAGMAIYDTMQYVRSPVATICIGQAASMASLLLAAGAKGKRYSLPYARIL 121

Query: 155 IHQPSGGYSGQAKDITIHTKQIVRVWDALNELYSKHTSQPVDTIKEYMDRDYFMTPEEAK 214
           IHQP GG  GQA DI IH K+I+R+   LNE+ S+HT QP++ I    +RDYFM+ +EAK
Sbjct: 122 IHQPLGGVQGQATDIEIHAKEILRMRQFLNEILSRHTGQPIEKIARDTERDYFMSAQEAK 181

Query: 215 EFGIIDEVMDQR 227
           E+GIIDEV D R
Sbjct: 182 EYGIIDEVYDVR 193

[Close]
BLAST of CmaCh01G002510 vs. Swiss-Prot
Match: CLPP_BARBK (ATP-dependent Clp protease proteolytic subunit OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=clpP PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.1e-70
Identity = 128/196 (65.31%), Postives = 158/196 (80.61%), Query Frame = 1 

Query: 31  RRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPS 90
           + A SL+PMV+E T+RGERAYDIFSRLLKERII INGP+ D  A +V AQLLFLE+ENP 
Sbjct: 6   KTALSLVPMVVEQTNRGERAYDIFSRLLKERIIFINGPVEDSMAMLVCAQLLFLEAENPK 65

Query: 91  KPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPN 150
           K I++Y+NSPGG VT+G+AIYDTMQ+IR PI+T+C+GQAASM SLLL AGAKG R SLPN
Sbjct: 66  KEISLYINSPGGVVTSGMAIYDTMQFIRPPISTLCMGQAASMGSLLLTAGAKGHRFSLPN 125

Query: 151 ATIMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYSKHTSQPVDTIKEYMDRDYFMTP 210
           A IM+HQPSGG+ GQA DI  H + I+R+   LNE+Y +HT Q  + I+  +DRD+FMT 
Sbjct: 126 ARIMVHQPSGGFQGQASDIERHAQDIIRMKRHLNEIYVQHTGQDYEIIENTLDRDHFMTA 185

Query: 211 EEAKEFGIIDEVMDQR 227
           EEAK FG+ID+V+  R
Sbjct: 186 EEAKMFGLIDDVIQYR 201

[Close]
BLAST of CmaCh01G002510 vs. Swiss-Prot
Match: CLPP_BARQU (ATP-dependent Clp protease proteolytic subunit OS=Bartonella quintana (strain Toulouse) GN=clpP PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.8e-70
Identity = 125/196 (63.78%), Postives = 159/196 (81.12%), Query Frame = 1 

Query: 31  RRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPS 90
           + A SL+PMVIE T+RGERAYDIFSRLLKERII INGP+ D  A +V AQLLFLE+ENP 
Sbjct: 6   KTALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDSMAMLVCAQLLFLEAENPK 65

Query: 91  KPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPN 150
           K I++Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASM SLLL AGAKG R +LPN
Sbjct: 66  KEISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPN 125

Query: 151 ATIMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYSKHTSQPVDTIKEYMDRDYFMTP 210
           A IM+HQPSGG+ GQA DI  H + I+++   LNE+Y +HT Q  + I+  +DRD+FMT 
Sbjct: 126 ARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQDYEVIERTLDRDHFMTA 185

Query: 211 EEAKEFGIIDEVMDQR 227
           EEAK+FG++D+V+  R
Sbjct: 186 EEAKQFGLVDDVIQYR 201

[Close]
BLAST of CmaCh01G002510 vs. TrEMBL
Match: A0A0A0LC78_CUCSA (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=Csa_3G653410 PE=3 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 3.2e-121
Identity = 222/242 (91.74%), Postives = 232/242 (95.87%), Query Frame = 1 

Query: 1   MIWRSLASTSSMLLAKSTGLANGRTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKE 60
           MIWRSLASTS +L AKST  A GRTA RDFRR YSL+PMVIEHTSRGERAYDIFSRLLKE
Sbjct: 1   MIWRSLASTSMLLAAKSTASACGRTAMRDFRRPYSLVPMVIEHTSRGERAYDIFSRLLKE 60

Query: 61  RIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSP 120
           RIICINGPISDDTAHVVVAQLLFLESENP+KPI+MYLNSPGGAVTAGLAIYDTMQYIRSP
Sbjct: 61  RIICINGPISDDTAHVVVAQLLFLESENPTKPISMYLNSPGGAVTAGLAIYDTMQYIRSP 120

Query: 121 INTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDITIHTKQIVRVW 180
           INTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKD+TIHTKQIVRVW
Sbjct: 121 INTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVW 180

Query: 181 DALNELYSKHTSQPVDTIKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGTQGK 240
           DALNELYSKHTSQ V+ I++YMDRDYFMTPEEAKEFGIIDEV+DQRPIALVTDAVG +GK
Sbjct: 181 DALNELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGNEGK 240

Query: 241 DK 243
           DK
Sbjct: 241 DK 242

[Close]
BLAST of CmaCh01G002510 vs. TrEMBL
Match: A0A0J8BRK0_BETVU (ATP-dependent Clp protease proteolytic subunit OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g202980 PE=3 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 8.1e-109
Identity = 203/246 (82.52%), Postives = 223/246 (90.65%), Query Frame = 1 

Query: 1   MIWRSLASTSSML-LAKSTGLANGRTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLK 60
           M+  SL   SS+  L+ S GL + ++      RAYSLIPMVIEH+SRGERAYDIFSRLLK
Sbjct: 1   MLRTSLTKFSSLRSLSSSNGLLSSQSC-----RAYSLIPMVIEHSSRGERAYDIFSRLLK 60

Query: 61  ERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRS 120
           ERIICINGPI+DDTAHVVVAQLL+LESENPSKPI+MYLNSPGGAVTAGLAIYDTMQYIRS
Sbjct: 61  ERIICINGPIADDTAHVVVAQLLYLESENPSKPIHMYLNSPGGAVTAGLAIYDTMQYIRS 120

Query: 121 PINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDITIHTKQIVRV 180
           PINTICLGQAASMASLLLAAG KGERR+LPNAT+M+HQPSGGYSGQAKD+TIHTKQIVRV
Sbjct: 121 PINTICLGQAASMASLLLAAGTKGERRALPNATVMVHQPSGGYSGQAKDMTIHTKQIVRV 180

Query: 181 WDALNELYSKHTSQPVDTIKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGTQG 240
           WD+LNELYSKHT QPVD I++YMDRDYFMTPEEAKEFGIIDEV+DQRPIALV+DAV  + 
Sbjct: 181 WDSLNELYSKHTGQPVDNIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVSDAVANED 240

Query: 241 KDKGSN 246
           KDKGSN
Sbjct: 241 KDKGSN 241

[Close]
BLAST of CmaCh01G002510 vs. TrEMBL
Match: A0A0K9RUW1_SPIOL (ATP-dependent Clp protease proteolytic subunit OS=Spinacia oleracea GN=SOVF_031760 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 3.8e-106
Identity = 197/240 (82.08%), Postives = 216/240 (90.00%), Query Frame = 1 

Query: 4   RSLASTSSMLLAKSTGLANGRTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERII 63
           RS  S    L   S+  +NG ++ +   RA+SLIPMVIEH+SRGERAYDIFSRLLKERII
Sbjct: 3   RSALSKGLSLRTSSSSFSNGLSSQKC--RAFSLIPMVIEHSSRGERAYDIFSRLLKERII 62

Query: 64  CINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINT 123
           CINGPI+DDTAHVVVAQLL+LESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINT
Sbjct: 63  CINGPIADDTAHVVVAQLLYLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINT 122

Query: 124 ICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDITIHTKQIVRVWDAL 183
           ICLGQAASM SLLLAAG KGERRSLPNATIM+HQPSGGYSGQAKD+TIHTKQIVRVWD+L
Sbjct: 123 ICLGQAASMGSLLLAAGTKGERRSLPNATIMVHQPSGGYSGQAKDMTIHTKQIVRVWDSL 182

Query: 184 NELYSKHTSQPVDTIKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGTQGKDKG 243
           N LYSKHT QPVD I++YMDRDYFMTPEEAKEFGIIDEV+++RPI LV+DAV T+ KDKG
Sbjct: 183 NALYSKHTGQPVDVIQKYMDRDYFMTPEEAKEFGIIDEVINERPIDLVSDAVSTEEKDKG 240

[Close]
BLAST of CmaCh01G002510 vs. TrEMBL
Match: A0A103Y9Z4_CYNCS (ATP-dependent Clp protease proteolytic subunit OS=Cynara cardunculus var. scolymus GN=Ccrd_016414 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 3.8e-106
Identity = 192/226 (84.96%), Postives = 212/226 (93.81%), Query Frame = 1 

Query: 18  TGLANGRTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVV 77
           +G+A  R A     R+Y LIPMVIEH+SRGERAYDIFSRLLKERIICINGPISDDT+HVV
Sbjct: 14  SGVAAARPAINHQWRSYGLIPMVIEHSSRGERAYDIFSRLLKERIICINGPISDDTSHVV 73

Query: 78  VAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLL 137
           VAQLLFLESENPSKPI+MYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLL
Sbjct: 74  VAQLLFLESENPSKPIHMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLL 133

Query: 138 AAGAKGERRSLPNATIMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYSKHTSQPVDT 197
           AAGAKGERR+LPNATIMIHQPSGGYSGQAKD+TIHTK+I+R+W++LN LYSKHTSQPVD 
Sbjct: 134 AAGAKGERRALPNATIMIHQPSGGYSGQAKDMTIHTKEIIRIWESLNGLYSKHTSQPVDV 193

Query: 198 IKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGTQGKDKG 244
           I++ MDRDYFMTPEEAKEFGIIDEV+D+RP+ LVTDAVG++GK KG
Sbjct: 194 IEKNMDRDYFMTPEEAKEFGIIDEVIDERPLTLVTDAVGSEGKGKG 239

[Close]
BLAST of CmaCh01G002510 vs. TrEMBL
Match: A5AL82_VITVI (ATP-dependent Clp protease proteolytic subunit OS=Vitis vinifera GN=VITISV_024612 PE=3 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 6.4e-106
Identity = 189/214 (88.32%), Postives = 207/214 (96.73%), Query Frame = 1 

Query: 32  RAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSK 91
           R+Y+LIPMVIEH+SRGERAYDIFSRLLKERI+CINGPISDDTAHVVVAQLLFLESENPSK
Sbjct: 6   RSYALIPMVIEHSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSK 65

Query: 92  PINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNA 151
           PI+MYLNSPGGAV+AGLAIYDTMQYIRSP+NTICLGQAASM SLLLAAGAKGERR+LPNA
Sbjct: 66  PIHMYLNSPGGAVSAGLAIYDTMQYIRSPVNTICLGQAASMGSLLLAAGAKGERRALPNA 125

Query: 152 TIMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYSKHTSQPVDTIKEYMDRDYFMTPE 211
           TIMIHQPSGGYSGQAKD+TIHTKQI+RVWD+LN LY+KHT Q +D I++ MDRDYFMTPE
Sbjct: 126 TIMIHQPSGGYSGQAKDMTIHTKQIIRVWDSLNALYAKHTGQSLDIIQKNMDRDYFMTPE 185

Query: 212 EAKEFGIIDEVMDQRPIALVTDAVGTQGKDKGSN 246
           EAKEFGIIDEV+DQRP+ALVTDAVG +GKDKGSN
Sbjct: 186 EAKEFGIIDEVIDQRPMALVTDAVGNEGKDKGSN 219

[Close]
BLAST of CmaCh01G002510 vs. TAIR10
Match: AT5G23140.1 (AT5G23140.1 nuclear-encoded CLP protease P7)

HSP 1 Score: 382.5 bits (981), Expect = 2.0e-106
Identity = 192/242 (79.34%), Postives = 214/242 (88.43%), Query Frame = 1 

Query: 4   RSLASTSSMLLAKSTGLANGRTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERII 63
           R L S + ML +  + +A   T+    RR+YSLIPMVIEH+SRGERAYDIFSRLLKERII
Sbjct: 3   RGLVSGAKMLSSTPSSMA---TSIATGRRSYSLIPMVIEHSSRGERAYDIFSRLLKERII 62

Query: 64  CINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINT 123
           CINGPI+DDT+HVVVAQLL+LESENPSKPI+MYLNSPGG VTAGLAIYDTMQYIRSPI+T
Sbjct: 63  CINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIYDTMQYIRSPIST 122

Query: 124 ICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDITIHTKQIVRVWDAL 183
           ICLGQAASMASLLLAAGAKG+RRSLPNAT+MIHQPSGGYSGQAKDITIHTKQIVRVWDAL
Sbjct: 123 ICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITIHTKQIVRVWDAL 182

Query: 184 NELYSKHTSQPVDTIKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGTQGKDKG 243
           NELY KHT QP+D +   MDRD+FMTPEEAK FGIIDEV+D+RP+ LV DAVG + KDK 
Sbjct: 183 NELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDERPLELVKDAVGNESKDKS 241

Query: 244 SN 246
           S+
Sbjct: 243 SS 241

[Close]
BLAST of CmaCh01G002510 vs. TAIR10
Match: AT1G02560.1 (AT1G02560.1 nuclear encoded CLP protease 5)

HSP 1 Score: 180.3 bits (456), Expect = 1.5e-45
Identity = 88/176 (50.00%), Postives = 126/176 (71.59%), Query Frame = 1 

Query: 48  ERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAG 107
           ER   I S+L + RII   G + DD A+++VAQLL+L++ +P+K I MY+NSPGG+VTAG
Sbjct: 110 ERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAG 169

Query: 108 LAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAK 167
           +AI+DTM++IR  ++T+C+G AASM + LL+AG KG+R SLPN+ IMIHQP GG  G   
Sbjct: 170 MAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQT 229

Query: 168 DITIHTKQIVRVWDALNELYSKHTSQPVDTIKEYMDRDYFMTPEEAKEFGIIDEVM 224
           DI I   +++     LN   + HT Q ++ I +  DRD+FM+ +EAKE+G+ID V+
Sbjct: 230 DIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 285

[Close]
BLAST of CmaCh01G002510 vs. TAIR10
Match: AT1G66670.1 (AT1G66670.1 CLP protease proteolytic subunit 3)

HSP 1 Score: 162.5 bits (410), Expect = 3.2e-40
Identity = 74/180 (41.11%), Postives = 125/180 (69.44%), Query Frame = 1 

Query: 52  DIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIY 111
           D  + LL++RI+ +   + D TA +V++QLL L++E+  + I +++NSPGG++TAG+ IY
Sbjct: 85  DTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIY 144

Query: 112 DTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDITI 171
           D M+  ++ ++T+CLG AASM + LLA+G+KG+R  +PN+ +MIHQP G   G+A +++I
Sbjct: 145 DAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSI 204

Query: 172 HTKQIVRVWDALNELYSKHTSQPVDTIKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALV 231
             ++++     LN+++S+ T +P   I+   DRD F+ P EAKE+G+ID V+D     L+
Sbjct: 205 RIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGKPGLI 264

[Close]
BLAST of CmaCh01G002510 vs. TAIR10
Match: AT5G45390.1 (AT5G45390.1 CLP protease P4)

HSP 1 Score: 159.8 bits (403), Expect = 2.1e-39
Identity = 78/183 (42.62%), Postives = 125/183 (68.31%), Query Frame = 1 

Query: 42  EHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPG 101
           E   RG  + D+   LL+ERI+ +   I D  A  +++QLL L++++P K I +++NSPG
Sbjct: 70  ESAIRGAES-DVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPG 129

Query: 102 GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGG 161
           G+++A +AIYD +Q +R+ ++TI LG AAS AS++L AG KG+R ++PN  IMIHQP GG
Sbjct: 130 GSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGG 189

Query: 162 YSGQAKDITIHTKQIVRVWDALNELYSKHTSQPVDTIKEYMDRDYFMTPEEAKEFGIIDE 221
            SGQA D+ I  K+++   + +  + +  TS+  + + + +DRD +M+P EA E+G+ID 
Sbjct: 190 ASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDG 249

Query: 222 VMD 225
           V+D
Sbjct: 250 VID 251

[Close]
BLAST of CmaCh01G002510 vs. TAIR10
Match: AT1G11750.2 (AT1G11750.2 CLP protease proteolytic subunit 6)

HSP 1 Score: 141.0 bits (354), Expect = 1.0e-33
Identity = 68/173 (39.31%), Postives = 105/173 (60.69%), Query Frame = 1 

Query: 52  DIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIY 111
           D+ S L + RII I  PI+   A  V++QL+ L S +    I MYLN PGG+  + LAIY
Sbjct: 114 DLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLAIY 173

Query: 112 DTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDITI 171
           D M +I+  + T+  G AAS  +LLLA G KG R ++PN  +MIHQP  G  G  +D+  
Sbjct: 174 DCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVEDVRR 233

Query: 172 HTKQIVRVWDALNELYSKHTSQPVDTIKEYMDRDYFMTPEEAKEFGIIDEVMD 225
              + +     ++ +Y+  T QP++ +++Y +RD F++  EA EFG+ID +++
Sbjct: 234 QVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDGLLE 286

[Close]
BLAST of CmaCh01G002510 vs. NCBI nr
Match: gi|659123800|ref|XP_008461846.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Cucumis melo])

HSP 1 Score: 450.7 bits (1158), Expect = 1.7e-123
Identity = 226/242 (93.39%), Postives = 234/242 (96.69%), Query Frame = 1 

Query: 1   MIWRSLASTSSMLLAKSTGLANGRTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKE 60
           MIWRSLASTS +L AKST  A+GRTA RDFRRAYSL+PMVIEHTSRGERAYDIFSRLLKE
Sbjct: 1   MIWRSLASTSMLLAAKSTASASGRTAMRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKE 60

Query: 61  RIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSP 120
           RIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSP
Sbjct: 61  RIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSP 120

Query: 121 INTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDITIHTKQIVRVW 180
           INTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKD+TIHTKQIVRVW
Sbjct: 121 INTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVW 180

Query: 181 DALNELYSKHTSQPVDTIKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGTQGK 240
           DALNELYSKHTSQ VD I++YMDRDYFMTPEEAKEFGIIDEV+DQRPIALVTDAVG +GK
Sbjct: 181 DALNELYSKHTSQSVDIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGNEGK 240

Query: 241 DK 243
           DK
Sbjct: 241 DK 242

[Close]
BLAST of CmaCh01G002510 vs. NCBI nr
Match: gi|449461681|ref|XP_004148570.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Cucumis sativus])

HSP 1 Score: 442.6 bits (1137), Expect = 4.5e-121
Identity = 222/242 (91.74%), Postives = 232/242 (95.87%), Query Frame = 1 

Query: 1   MIWRSLASTSSMLLAKSTGLANGRTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKE 60
           MIWRSLASTS +L AKST  A GRTA RDFRR YSL+PMVIEHTSRGERAYDIFSRLLKE
Sbjct: 1   MIWRSLASTSMLLAAKSTASACGRTAMRDFRRPYSLVPMVIEHTSRGERAYDIFSRLLKE 60

Query: 61  RIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSP 120
           RIICINGPISDDTAHVVVAQLLFLESENP+KPI+MYLNSPGGAVTAGLAIYDTMQYIRSP
Sbjct: 61  RIICINGPISDDTAHVVVAQLLFLESENPTKPISMYLNSPGGAVTAGLAIYDTMQYIRSP 120

Query: 121 INTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDITIHTKQIVRVW 180
           INTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKD+TIHTKQIVRVW
Sbjct: 121 INTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVW 180

Query: 181 DALNELYSKHTSQPVDTIKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGTQGK 240
           DALNELYSKHTSQ V+ I++YMDRDYFMTPEEAKEFGIIDEV+DQRPIALVTDAVG +GK
Sbjct: 181 DALNELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGNEGK 240

Query: 241 DK 243
           DK
Sbjct: 241 DK 242

[Close]
BLAST of CmaCh01G002510 vs. NCBI nr
Match: gi|731354616|ref|XP_010688696.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 401.4 bits (1030), Expect = 1.2e-108
Identity = 203/246 (82.52%), Postives = 223/246 (90.65%), Query Frame = 1 

Query: 1   MIWRSLASTSSML-LAKSTGLANGRTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLK 60
           M+  SL   SS+  L+ S GL + ++      RAYSLIPMVIEH+SRGERAYDIFSRLLK
Sbjct: 1   MLRTSLTKFSSLRSLSSSNGLLSSQSC-----RAYSLIPMVIEHSSRGERAYDIFSRLLK 60

Query: 61  ERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRS 120
           ERIICINGPI+DDTAHVVVAQLL+LESENPSKPI+MYLNSPGGAVTAGLAIYDTMQYIRS
Sbjct: 61  ERIICINGPIADDTAHVVVAQLLYLESENPSKPIHMYLNSPGGAVTAGLAIYDTMQYIRS 120

Query: 121 PINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDITIHTKQIVRV 180
           PINTICLGQAASMASLLLAAG KGERR+LPNAT+M+HQPSGGYSGQAKD+TIHTKQIVRV
Sbjct: 121 PINTICLGQAASMASLLLAAGTKGERRALPNATVMVHQPSGGYSGQAKDMTIHTKQIVRV 180

Query: 181 WDALNELYSKHTSQPVDTIKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGTQG 240
           WD+LNELYSKHT QPVD I++YMDRDYFMTPEEAKEFGIIDEV+DQRPIALV+DAV  + 
Sbjct: 181 WDSLNELYSKHTGQPVDNIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVSDAVANED 240

Query: 241 KDKGSN 246
           KDKGSN
Sbjct: 241 KDKGSN 241

[Close]
BLAST of CmaCh01G002510 vs. NCBI nr
Match: gi|976920532|gb|KVI05254.1| (ClpP [Cynara cardunculus var. scolymus])

HSP 1 Score: 392.5 bits (1007), Expect = 5.4e-106
Identity = 192/226 (84.96%), Postives = 212/226 (93.81%), Query Frame = 1 

Query: 18  TGLANGRTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVV 77
           +G+A  R A     R+Y LIPMVIEH+SRGERAYDIFSRLLKERIICINGPISDDT+HVV
Sbjct: 14  SGVAAARPAINHQWRSYGLIPMVIEHSSRGERAYDIFSRLLKERIICINGPISDDTSHVV 73

Query: 78  VAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLL 137
           VAQLLFLESENPSKPI+MYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLL
Sbjct: 74  VAQLLFLESENPSKPIHMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLL 133

Query: 138 AAGAKGERRSLPNATIMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYSKHTSQPVDT 197
           AAGAKGERR+LPNATIMIHQPSGGYSGQAKD+TIHTK+I+R+W++LN LYSKHTSQPVD 
Sbjct: 134 AAGAKGERRALPNATIMIHQPSGGYSGQAKDMTIHTKEIIRIWESLNGLYSKHTSQPVDV 193

Query: 198 IKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGTQGKDKG 244
           I++ MDRDYFMTPEEAKEFGIIDEV+D+RP+ LVTDAVG++GK KG
Sbjct: 194 IEKNMDRDYFMTPEEAKEFGIIDEVIDERPLTLVTDAVGSEGKGKG 239

[Close]
BLAST of CmaCh01G002510 vs. NCBI nr
Match: gi|902232589|gb|KNA22709.1| (hypothetical protein SOVF_031760 [Spinacia oleracea])

HSP 1 Score: 392.5 bits (1007), Expect = 5.4e-106
Identity = 197/240 (82.08%), Postives = 216/240 (90.00%), Query Frame = 1 

Query: 4   RSLASTSSMLLAKSTGLANGRTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERII 63
           RS  S    L   S+  +NG ++ +   RA+SLIPMVIEH+SRGERAYDIFSRLLKERII
Sbjct: 3   RSALSKGLSLRTSSSSFSNGLSSQKC--RAFSLIPMVIEHSSRGERAYDIFSRLLKERII 62

Query: 64  CINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINT 123
           CINGPI+DDTAHVVVAQLL+LESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINT
Sbjct: 63  CINGPIADDTAHVVVAQLLYLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINT 122

Query: 124 ICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDITIHTKQIVRVWDAL 183
           ICLGQAASM SLLLAAG KGERRSLPNATIM+HQPSGGYSGQAKD+TIHTKQIVRVWD+L
Sbjct: 123 ICLGQAASMGSLLLAAGTKGERRSLPNATIMVHQPSGGYSGQAKDMTIHTKQIVRVWDSL 182

Query: 184 NELYSKHTSQPVDTIKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGTQGKDKG 243
           N LYSKHT QPVD I++YMDRDYFMTPEEAKEFGIIDEV+++RPI LV+DAV T+ KDKG
Sbjct: 183 NALYSKHTGQPVDVIQKYMDRDYFMTPEEAKEFGIIDEVINERPIDLVSDAVSTEEKDKG 240

The following BLAST results are available for this feature:
BLAST of CmaCh01G002510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CLPP2_ARATH3.5e-10579.34ATP-dependent Clp protease proteolytic subunit 2, mitochondrial OS=Arabidopsis t... [more]
CLPP_BARHE9.6e-7164.29ATP-dependent Clp protease proteolytic subunit OS=Bartonella henselae (strain AT... [more]
CLPP_PELTS1.3e-7065.63ATP-dependent Clp protease proteolytic subunit OS=Pelotomaculum thermopropionicu... [more]
CLPP_BARBK2.1e-7065.31ATP-dependent Clp protease proteolytic subunit OS=Bartonella bacilliformis (stra... [more]
CLPP_BARQU2.8e-7063.78ATP-dependent Clp protease proteolytic subunit OS=Bartonella quintana (strain To... [more]
BLAST of CmaCh01G002510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LC78_CUCSA3.2e-12191.74ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=Csa_3G65341... [more]
A0A0J8BRK0_BETVU8.1e-10982.52ATP-dependent Clp protease proteolytic subunit OS=Beta vulgaris subsp. vulgaris ... [more]
A0A0K9RUW1_SPIOL3.8e-10682.08ATP-dependent Clp protease proteolytic subunit OS=Spinacia oleracea GN=SOVF_0317... [more]
A0A103Y9Z4_CYNCS3.8e-10684.96ATP-dependent Clp protease proteolytic subunit OS=Cynara cardunculus var. scolym... [more]
A5AL82_VITVI6.4e-10688.32ATP-dependent Clp protease proteolytic subunit OS=Vitis vinifera GN=VITISV_02461... [more]
BLAST of CmaCh01G002510 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G23140.12.0e-10679.34 nuclear-encoded CLP protease P7[more]
AT1G02560.11.5e-4550.00 nuclear encoded CLP protease 5[more]
AT1G66670.13.2e-4041.11 CLP protease proteolytic subunit 3[more]
AT5G45390.12.1e-3942.62 CLP protease P4[more]
AT1G11750.21.0e-3339.31 CLP protease proteolytic subunit 6[more]
BLAST of CmaCh01G002510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659123800|ref|XP_008461846.1|1.7e-12393.39PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Cucu... [more]
gi|449461681|ref|XP_004148570.1|4.5e-12191.74PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Cucu... [more]
gi|731354616|ref|XP_010688696.1|1.2e-10882.52PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Beta... [more]
gi|976920532|gb|KVI05254.1|5.4e-10684.96ClpP [Cynara cardunculus var. scolymus][more]
gi|902232589|gb|KNA22709.1|5.4e-10682.08hypothetical protein SOVF_031760 [Spinacia oleracea][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001907ClpP
IPR018215ClpP_Ser_AS
IPR023562ClpP/TepA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0006508 proteolysis
cellular_component GO:0009840 chloroplastic endopeptidase Clp complex
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0050897 cobalt ion binding
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh01G002510.1CmaCh01G002510.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001907ATP-dependent Clp protease proteolytic subunitPRINTSPR00127CLPPROTEASEPcoord: 144..163
score: 6.5E-46coord: 123..140
score: 6.5E-46coord: 52..67
score: 6.5E-46coord: 92..112
score: 6.5E-46coord: 201..220
score: 6.5
IPR001907ATP-dependent Clp protease proteolytic subunitHAMAPMF_00444ClpPcoord: 36..226
score: 40
IPR018215ClpP, Ser active sitePROSITEPS00381CLP_PROTEASE_SERcoord: 123..134
scor
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPANTHERPTHR10381ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNITcoord: 31..245
score: 6.0E
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPFAMPF00574CLP_proteasecoord: 45..225
score: 1.4
NoneNo IPR availablePANTHERPTHR10381:SF11ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT, MITOCHONDRIAL-RELATEDcoord: 31..245
score: 6.0E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh01G002510Cucsa.192270Cucumber (Gy14) v1cgycmaB0557
CmaCh01G002510Cla017308Watermelon (97103) v1cmawmB416
CmaCh01G002510Csa3G653410Cucumber (Chinese Long) v2cmacuB450
CmaCh01G002510MELO3C024021Melon (DHL92) v3.5.1cmameB426
CmaCh01G002510ClCG10G011980Watermelon (Charleston Gray)cmawcgB387
CmaCh01G002510CSPI03G28990Wild cucumber (PI 183967)cmacpiB453
CmaCh01G002510CmoCh01G002610Cucurbita moschata (Rifu)cmacmoB468
CmaCh01G002510CmoCh14G009950Cucurbita moschata (Rifu)cmacmoB462
CmaCh01G002510Lsi03G011690Bottle gourd (USVL1VR-Ls)cmalsiB422
CmaCh01G002510Cp4.1LG02g15890Cucurbita pepo (Zucchini)cmacpeB491
CmaCh01G002510Cp4.1LG03g04850Cucurbita pepo (Zucchini)cmacpeB494
CmaCh01G002510MELO3C024021.2Melon (DHL92) v3.6.1cmamedB489
CmaCh01G002510CsaV3_3G031380Cucumber (Chinese Long) v3cmacucB0542
CmaCh01G002510Cla97C10G194790Watermelon (97103) v2cmawmbB445
CmaCh01G002510Bhi11G001136Wax gourdcmawgoB0553
CmaCh01G002510CsGy3G026880Cucumber (Gy14) v2cgybcmaB364
CmaCh01G002510Carg11195Silver-seed gourdcarcmaB1134
CmaCh01G002510Carg07344Silver-seed gourdcarcmaB1059
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh01G002510CmaCh14G009720Cucurbita maxima (Rimu)cmacmaB255
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh01G002510Cucumber (Chinese Long) v3cmacucB0545
CmaCh01G002510Cucumber (Chinese Long) v3cmacucB0595
CmaCh01G002510Watermelon (97103) v2cmawmbB511
CmaCh01G002510Wax gourdcmawgoB0610
CmaCh01G002510Cucurbita maxima (Rimu)cmacmaB360
CmaCh01G002510Cucurbita maxima (Rimu)cmacmaB440
CmaCh01G002510Cucumber (Gy14) v1cgycmaB0347
CmaCh01G002510Cucumber (Gy14) v1cgycmaB0559
CmaCh01G002510Cucurbita moschata (Rifu)cmacmoB466
CmaCh01G002510Cucurbita moschata (Rifu)cmacmoB490
CmaCh01G002510Wild cucumber (PI 183967)cmacpiB456
CmaCh01G002510Wild cucumber (PI 183967)cmacpiB502
CmaCh01G002510Cucumber (Chinese Long) v2cmacuB453
CmaCh01G002510Cucumber (Chinese Long) v2cmacuB496
CmaCh01G002510Melon (DHL92) v3.5.1cmameB404
CmaCh01G002510Watermelon (Charleston Gray)cmawcgB377
CmaCh01G002510Watermelon (97103) v1cmawmB407
CmaCh01G002510Cucurbita pepo (Zucchini)cmacpeB465
CmaCh01G002510Cucurbita pepo (Zucchini)cmacpeB472
CmaCh01G002510Bottle gourd (USVL1VR-Ls)cmalsiB418
CmaCh01G002510Cucumber (Gy14) v2cgybcmaB366
CmaCh01G002510Cucumber (Gy14) v2cgybcmaB938
CmaCh01G002510Melon (DHL92) v3.6.1cmamedB461
CmaCh01G002510Silver-seed gourdcarcmaB0143
CmaCh01G002510Silver-seed gourdcarcmaB0626