CmoCh01G002610 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh01G002610
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionATP-dependent Clp protease proteolytic subunit (3.4.21.92)
LocationCmo_Chr01 : 1182567 .. 1184257 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAGGGGAAGAGAAGGGAGACGAAGCTCTCAAATCTGGAGGCTGAAGTTTGAAGCTGATAAACCCTCGATTACGATCTCAACGATCGAGTCAATTGGCCATGATTTGGAGGAGATTAGCTTCGACTTCCTCCATGCTGCTAGCTAAATCCACGGCGTTGGCGAACGGAAGAACGGCGGCGAGGGATTTTCGTCGCGGTTACAGCTTGATTCCGATGGTGATAGAACACACATCGAGGGGAGAAAGGGCATACGATATCTTCTCTCGTCTTCTTAAGGAGCGTATAATTTGCATCAATGGCCCTATTTCAGATGATACTGCTCATGTCGTCGTTGCTCAACTCCTTTTTCTCGAGTCGGAGAACCCCTCGAAGCCCATCAACATGTACCTCAACTCCCCCGGCGGCGCCGTCACTGCCGGTATAATAGAAAGCTACACTTACTAATTCAGGATTTTCATTGTTTTGTGCATTATCATGACTTAATACCAGTTTTTTAACTCCTCGTTTCTGACTTTGAGAATCTCGTTTAGAGTATGAACAAATAATTAAATTGGGTAAATGGGTGATTTAACATAATATAAAGTGGGAGATTATCATTAAATATACGGTATTCTATAGGTTTAATCTTTTGAGTTTTGGATTTTTGGTCTTGTTCTAGTTACACATGCACATATAGTACTTTTAATTCGTATTATTTTCTCCCAATTTGAGGTTTGTTGACAAGAAAACGAAAGGATTTCAAACTATTTCAGTTCACTGATTATGAAACTTGGCTAATCTCACATTGGAAGTCTACTTCCCTTCCCCTCATAATGTTAATTTTCACTGTCTGTTACCTCAGTAGACTTCAATTGTCATTTGTGTTCAAAGATTATAATCATGAACTTCGTTCCAAGGGCCAACCTTTCCTGCTTGGAAGATTCGAGGTTGCTGAATTTGATAGAATATTTGTGATGTATTTACAGGGCTAGCTATATATGATACTATGCAGTATATAAGGTCGCCCATCAATACCATCTGTTTGGGTCAGGCTGCTTCAATGGCTTCTCTTCTTCTAGCTGCTGGTGCCAAGGGTGAGAGACGATCGCTTCCTAATGCAACTATCATGATTCACCAGCCTTCTGGTGGATACAGTGGGCAAGCAAAGGACATAACGATTCACACGAAACAGATCGTTCGGGTTTGGGATGCACTTAACGAGCTGTACTCCAAGCATACGTCACAACCAATAGATACTATCAAAGAGTATATGGATAGGGATTATTTCATGACCCCAGAAGAGGCCAAAGAGTTTGGCATTATCGACGAGGTAATGGATCAAAGGCCAATAGCTCTGGTGACTGATGCAGTTGGTTCTCAAGGCAAGGATAAAGGTTCAAATTAAGAATGCGAGGTAGGATTATGACGCAAAAGCGTGGCATTTCAAAGTTCCATACTGACTTTTGTTAGAATTCTCTAAAAGCTGATCATATCTACCTAGATGTGATGGAATTGATTGTTTTTTTCTTAGCTAAATGTTGATTTAGCTGTTTGGATCAGTATTGTTATTAGCATTTCAAAGAGAAAAGCTTGAAATTTAATAGAATTTCAAATTTTGCTCGTATGACAACAAATGTCTATACTTTATCCATATTATGTTTGCTTCTTCTAGTTCAATTCTACACAATATCATGCTTCAGGTGTATCACAG

mRNA sequence

GAGAGGGGAAGAGAAGGGAGACGAAGCTCTCAAATCTGGAGGCTGAAGTTTGAAGCTGATAAACCCTCGATTACGATCTCAACGATCGAGTCAATTGGCCATGATTTGGAGGAGATTAGCTTCGACTTCCTCCATGCTGCTAGCTAAATCCACGGCGTTGGCGAACGGAAGAACGGCGGCGAGGGATTTTCGTCGCGGTTACAGCTTGATTCCGATGGTGATAGAACACACATCGAGGGGAGAAAGGGCATACGATATCTTCTCTCGTCTTCTTAAGGAGCGTATAATTTGCATCAATGGCCCTATTTCAGATGATACTGCTCATGTCGTCGTTGCTCAACTCCTTTTTCTCGAGTCGGAGAACCCCTCGAAGCCCATCAACATGTACCTCAACTCCCCCGGCGGCGCCGTCACTGCCGGGCTAGCTATATATGATACTATGCAGTATATAAGGTCGCCCATCAATACCATCTGTTTGGGTCAGGCTGCTTCAATGGCTTCTCTTCTTCTAGCTGCTGGTGCCAAGGGTGAGAGACGATCGCTTCCTAATGCAACTATCATGATTCACCAGCCTTCTGGTGGATACAGTGGGCAAGCAAAGGACATAACGATTCACACGAAACAGATCGTTCGGGTTTGGGATGCACTTAACGAGCTGTACTCCAAGCATACGTCACAACCAATAGATACTATCAAAGAGTATATGGATAGGGATTATTTCATGACCCCAGAAGAGGCCAAAGAGTTTGGCATTATCGACGAGGTAATGGATCAAAGGCCAATAGCTCTGGTGACTGATGCAGTTGGTTCTCAAGGCAAGGATAAAGGTTCAAATTAAGAATGCGAGGTAGGATTATGACGCAAAAGCGTGGCATTTCAAAGTTCCATACTGACTTTTGTTAGAATTCTCTAAAAGCTGATCATATCTACCTAGATGTGATGGAATTGATTGTTTTTTTCTTAGCTAAATGTTGATTTAGCTGTTTGGATCAGTATTGTTATTAGCATTTCAAAGAGAAAAGCTTGAAATTTAATAGAATTTCAAATTTTGCTCGTATGACAACAAATGTCTATACTTTATCCATATTATGTTTGCTTCTTCTAGTTCAATTCTACACAATATCATGCTTCAGGTGTATCACAG

Coding sequence (CDS)

ATGATTTGGAGGAGATTAGCTTCGACTTCCTCCATGCTGCTAGCTAAATCCACGGCGTTGGCGAACGGAAGAACGGCGGCGAGGGATTTTCGTCGCGGTTACAGCTTGATTCCGATGGTGATAGAACACACATCGAGGGGAGAAAGGGCATACGATATCTTCTCTCGTCTTCTTAAGGAGCGTATAATTTGCATCAATGGCCCTATTTCAGATGATACTGCTCATGTCGTCGTTGCTCAACTCCTTTTTCTCGAGTCGGAGAACCCCTCGAAGCCCATCAACATGTACCTCAACTCCCCCGGCGGCGCCGTCACTGCCGGGCTAGCTATATATGATACTATGCAGTATATAAGGTCGCCCATCAATACCATCTGTTTGGGTCAGGCTGCTTCAATGGCTTCTCTTCTTCTAGCTGCTGGTGCCAAGGGTGAGAGACGATCGCTTCCTAATGCAACTATCATGATTCACCAGCCTTCTGGTGGATACAGTGGGCAAGCAAAGGACATAACGATTCACACGAAACAGATCGTTCGGGTTTGGGATGCACTTAACGAGCTGTACTCCAAGCATACGTCACAACCAATAGATACTATCAAAGAGTATATGGATAGGGATTATTTCATGACCCCAGAAGAGGCCAAAGAGTTTGGCATTATCGACGAGGTAATGGATCAAAGGCCAATAGCTCTGGTGACTGATGCAGTTGGTTCTCAAGGCAAGGATAAAGGTTCAAATTAA
Homology
[Close]
BLAST of CmoCh01G002610 vs. Swiss-Prot
Match: CLPP2_ARATH (ATP-dependent Clp protease proteolytic subunit 2, mitochondrial OS=Arabidopsis thaliana GN=CLPP2 PE=1 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 3.5e-105
Identity = 192/242 (79.34%), Postives = 215/242 (88.84%), Query Frame = 1 

Query: 4   RRLASTSSMLLAKSTALANGRTAARDFRRGYSLIPMVIEHTSRGERAYDIFSRLLKERII 63
           R L S + ML +  +++A   T+    RR YSLIPMVIEH+SRGERAYDIFSRLLKERII
Sbjct: 3   RGLVSGAKMLSSTPSSMA---TSIATGRRSYSLIPMVIEHSSRGERAYDIFSRLLKERII 62

Query: 64  CINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINT 123
           CINGPI+DDT+HVVVAQLL+LESENPSKPI+MYLNSPGG VTAGLAIYDTMQYIRSPI+T
Sbjct: 63  CINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIYDTMQYIRSPIST 122

Query: 124 ICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDITIHTKQIVRVWDAL 183
           ICLGQAASMASLLLAAGAKG+RRSLPNAT+MIHQPSGGYSGQAKDITIHTKQIVRVWDAL
Sbjct: 123 ICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITIHTKQIVRVWDAL 182

Query: 184 NELYSKHTSQPIDTIKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGSQGKDKG 243
           NELY KHT QP+D +   MDRD+FMTPEEAK FGIIDEV+D+RP+ LV DAVG++ KDK 
Sbjct: 183 NELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDERPLELVKDAVGNESKDKS 241

Query: 244 SN 246
           S+
Sbjct: 243 SS 241

[Close]
BLAST of CmoCh01G002610 vs. Swiss-Prot
Match: CLPP_PELTS (ATP-dependent Clp protease proteolytic subunit OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=clpP PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 7.4e-71
Identity = 127/192 (66.15%), Postives = 160/192 (83.33%), Query Frame = 1 

Query: 35  SLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPIN 94
           +L+P+V+E T+RGERAYDI+SRLLK+RII + GPI D+TA++++AQ+LFLE+E+P K I 
Sbjct: 2   NLVPIVVEQTNRGERAYDIYSRLLKDRIIFLGGPIDDNTANLIIAQMLFLEAEDPEKDIQ 61

Query: 95  MYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIM 154
            Y+NSPGG VTAG+AIYDTMQY+RSP+ TIC+GQAASMASLLLAAGAKG+R SLP A I+
Sbjct: 62  FYINSPGGVVTAGMAIYDTMQYVRSPVATICIGQAASMASLLLAAGAKGKRYSLPYARIL 121

Query: 155 IHQPSGGYSGQAKDITIHTKQIVRVWDALNELYSKHTSQPIDTIKEYMDRDYFMTPEEAK 214
           IHQP GG  GQA DI IH K+I+R+   LNE+ S+HT QPI+ I    +RDYFM+ +EAK
Sbjct: 122 IHQPLGGVQGQATDIEIHAKEILRMRQFLNEILSRHTGQPIEKIARDTERDYFMSAQEAK 181

Query: 215 EFGIIDEVMDQR 227
           E+GIIDEV D R
Sbjct: 182 EYGIIDEVYDVR 193

[Close]
BLAST of CmoCh01G002610 vs. Swiss-Prot
Match: CLPP_BARHE (ATP-dependent Clp protease proteolytic subunit OS=Bartonella henselae (strain ATCC 49882 / DSM 28221 / Houston 1) GN=clpP PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.6e-70
Identity = 125/192 (65.10%), Postives = 157/192 (81.77%), Query Frame = 1 

Query: 35  SLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPIN 94
           SL+PMVIE T+RGERAYDIFSRLLKERII INGP+ D  A +V AQLLFLE+ENP K I+
Sbjct: 10  SLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEAENPKKEIS 69

Query: 95  MYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIM 154
           +Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASM SLLL AGAKG R +LPNA IM
Sbjct: 70  LYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPNARIM 129

Query: 155 IHQPSGGYSGQAKDITIHTKQIVRVWDALNELYSKHTSQPIDTIKEYMDRDYFMTPEEAK 214
           +HQPSGG+ GQA DI  H + I+++   LNE+Y +HT Q  D I+  +DRD+FMT EEAK
Sbjct: 130 VHQPSGGFQGQASDIERHAQDIIKMKQRLNEIYVQHTGQNYDVIERTLDRDHFMTAEEAK 189

Query: 215 EFGIIDEVMDQR 227
           +FG++D+V+  R
Sbjct: 190 QFGLVDDVIQYR 201

[Close]
BLAST of CmoCh01G002610 vs. Swiss-Prot
Match: CLPP_BRUSI (ATP-dependent Clp protease proteolytic subunit OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=clpP PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 3.6e-70
Identity = 123/195 (63.08%), Postives = 159/195 (81.54%), Query Frame = 1 

Query: 35  SLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPIN 94
           +L+PMV+E T+RGERAYDIFSRLLKERII +NGP+ D  + +V AQLLFLE+ENP K IN
Sbjct: 10  NLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEIN 69

Query: 95  MYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIM 154
           MY+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASM SLLL AGA G R +LPNA IM
Sbjct: 70  MYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALPNARIM 129

Query: 155 IHQPSGGYSGQAKDITIHTKQIVRVWDALNELYSKHTSQPIDTIKEYMDRDYFMTPEEAK 214
           +HQPSGG+ GQA DI  H + I+++   LNE+Y KHT +  DTI+  +DRD+FMT +EA 
Sbjct: 130 VHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERTLDRDHFMTAQEAL 189

Query: 215 EFGIIDEVMDQRPIA 230
           EFG+ID+V++ R ++
Sbjct: 190 EFGLIDKVVEARDVS 204

[Close]
BLAST of CmoCh01G002610 vs. Swiss-Prot
Match: CLPP_BRUA1 (ATP-dependent Clp protease proteolytic subunit OS=Brucella abortus (strain S19) GN=clpP PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 3.6e-70
Identity = 123/195 (63.08%), Postives = 159/195 (81.54%), Query Frame = 1 

Query: 35  SLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPIN 94
           +L+PMV+E T+RGERAYDIFSRLLKERII +NGP+ D  + +V AQLLFLE+ENP K IN
Sbjct: 10  NLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEIN 69

Query: 95  MYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIM 154
           MY+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASM SLLL AGA G R +LPNA IM
Sbjct: 70  MYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALPNARIM 129

Query: 155 IHQPSGGYSGQAKDITIHTKQIVRVWDALNELYSKHTSQPIDTIKEYMDRDYFMTPEEAK 214
           +HQPSGG+ GQA DI  H + I+++   LNE+Y KHT +  DTI+  +DRD+FMT +EA 
Sbjct: 130 VHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERTLDRDHFMTAQEAL 189

Query: 215 EFGIIDEVMDQRPIA 230
           EFG+ID+V++ R ++
Sbjct: 190 EFGLIDKVVEARDVS 204

[Close]
BLAST of CmoCh01G002610 vs. TrEMBL
Match: A0A0A0LC78_CUCSA (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=Csa_3G653410 PE=3 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 5.4e-121
Identity = 221/242 (91.32%), Postives = 233/242 (96.28%), Query Frame = 1 

Query: 1   MIWRRLASTSSMLLAKSTALANGRTAARDFRRGYSLIPMVIEHTSRGERAYDIFSRLLKE 60
           MIWR LASTS +L AKSTA A GRTA RDFRR YSL+PMVIEHTSRGERAYDIFSRLLKE
Sbjct: 1   MIWRSLASTSMLLAAKSTASACGRTAMRDFRRPYSLVPMVIEHTSRGERAYDIFSRLLKE 60

Query: 61  RIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSP 120
           RIICINGPISDDTAHVVVAQLLFLESENP+KPI+MYLNSPGGAVTAGLAIYDTMQYIRSP
Sbjct: 61  RIICINGPISDDTAHVVVAQLLFLESENPTKPISMYLNSPGGAVTAGLAIYDTMQYIRSP 120

Query: 121 INTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDITIHTKQIVRVW 180
           INTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKD+TIHTKQIVRVW
Sbjct: 121 INTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVW 180

Query: 181 DALNELYSKHTSQPIDTIKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGSQGK 240
           DALNELYSKHTSQ ++ I++YMDRDYFMTPEEAKEFGIIDEV+DQRPIALVTDAVG++GK
Sbjct: 181 DALNELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGNEGK 240

Query: 241 DK 243
           DK
Sbjct: 241 DK 242

[Close]
BLAST of CmoCh01G002610 vs. TrEMBL
Match: A0A0J8BRK0_BETVU (ATP-dependent Clp protease proteolytic subunit OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g202980 PE=3 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 5.2e-108
Identity = 195/230 (84.78%), Postives = 217/230 (94.35%), Query Frame = 1 

Query: 16  KSTALANGRTAARDFRRGYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAH 75
           +S + +NG  +++  R  YSLIPMVIEH+SRGERAYDIFSRLLKERIICINGPI+DDTAH
Sbjct: 13  RSLSSSNGLLSSQSCR-AYSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPIADDTAH 72

Query: 76  VVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASL 135
           VVVAQLL+LESENPSKPI+MYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASL
Sbjct: 73  VVVAQLLYLESENPSKPIHMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASL 132

Query: 136 LLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYSKHTSQPI 195
           LLAAG KGERR+LPNAT+M+HQPSGGYSGQAKD+TIHTKQIVRVWD+LNELYSKHT QP+
Sbjct: 133 LLAAGTKGERRALPNATVMVHQPSGGYSGQAKDMTIHTKQIVRVWDSLNELYSKHTGQPV 192

Query: 196 DTIKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGSQGKDKGSN 246
           D I++YMDRDYFMTPEEAKEFGIIDEV+DQRPIALV+DAV ++ KDKGSN
Sbjct: 193 DNIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVSDAVANEDKDKGSN 241

[Close]
BLAST of CmoCh01G002610 vs. TrEMBL
Match: A5AL82_VITVI (ATP-dependent Clp protease proteolytic subunit OS=Vitis vinifera GN=VITISV_024612 PE=3 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 4.9e-106
Identity = 189/214 (88.32%), Postives = 207/214 (96.73%), Query Frame = 1 

Query: 32  RGYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSK 91
           R Y+LIPMVIEH+SRGERAYDIFSRLLKERI+CINGPISDDTAHVVVAQLLFLESENPSK
Sbjct: 6   RSYALIPMVIEHSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSK 65

Query: 92  PINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNA 151
           PI+MYLNSPGGAV+AGLAIYDTMQYIRSP+NTICLGQAASM SLLLAAGAKGERR+LPNA
Sbjct: 66  PIHMYLNSPGGAVSAGLAIYDTMQYIRSPVNTICLGQAASMGSLLLAAGAKGERRALPNA 125

Query: 152 TIMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYSKHTSQPIDTIKEYMDRDYFMTPE 211
           TIMIHQPSGGYSGQAKD+TIHTKQI+RVWD+LN LY+KHT Q +D I++ MDRDYFMTPE
Sbjct: 126 TIMIHQPSGGYSGQAKDMTIHTKQIIRVWDSLNALYAKHTGQSLDIIQKNMDRDYFMTPE 185

Query: 212 EAKEFGIIDEVMDQRPIALVTDAVGSQGKDKGSN 246
           EAKEFGIIDEV+DQRP+ALVTDAVG++GKDKGSN
Sbjct: 186 EAKEFGIIDEVIDQRPMALVTDAVGNEGKDKGSN 219

[Close]
BLAST of CmoCh01G002610 vs. TrEMBL
Match: F6HF49_VITVI (ATP-dependent Clp protease proteolytic subunit OS=Vitis vinifera GN=VIT_01s0011g02100 PE=3 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 4.9e-106
Identity = 195/236 (82.63%), Postives = 214/236 (90.68%), Query Frame = 1 

Query: 14  LAKSTALANGR----TAARDFRRGYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPI 73
           L K  + A GR     A     R Y+LIPMVIEH+SRGERAYDIFSRLLKERI+CINGPI
Sbjct: 4   LTKLCSAATGRRLFPAATAVSTRSYALIPMVIEHSSRGERAYDIFSRLLKERIVCINGPI 63

Query: 74  SDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQA 133
           SDDTAHVVVAQLLFLESENPSKPI+MYLNSPGGAV+AGLAIYDTMQYIRSP+NTICLGQA
Sbjct: 64  SDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGAVSAGLAIYDTMQYIRSPVNTICLGQA 123

Query: 134 ASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYSK 193
           ASM SLLLAAGAKGERR+LPNATIMIHQPSGGYSGQAKD+TIHTKQI+RVWD+LN LY+K
Sbjct: 124 ASMGSLLLAAGAKGERRALPNATIMIHQPSGGYSGQAKDMTIHTKQIIRVWDSLNALYAK 183

Query: 194 HTSQPIDTIKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGSQGKDKGSN 246
           HT Q +D I++ MDRDYFMTPEEAKEFGIIDEV+DQRP+ALVTDAVG++GKDKGSN
Sbjct: 184 HTGQSLDIIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVGNEGKDKGSN 239

[Close]
BLAST of CmoCh01G002610 vs. TrEMBL
Match: A0A103Y9Z4_CYNCS (ATP-dependent Clp protease proteolytic subunit OS=Cynara cardunculus var. scolymus GN=Ccrd_016414 PE=3 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 1.1e-105
Identity = 191/226 (84.51%), Postives = 210/226 (92.92%), Query Frame = 1 

Query: 18  TALANGRTAARDFRRGYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVV 77
           + +A  R A     R Y LIPMVIEH+SRGERAYDIFSRLLKERIICINGPISDDT+HVV
Sbjct: 14  SGVAAARPAINHQWRSYGLIPMVIEHSSRGERAYDIFSRLLKERIICINGPISDDTSHVV 73

Query: 78  VAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLL 137
           VAQLLFLESENPSKPI+MYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLL
Sbjct: 74  VAQLLFLESENPSKPIHMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLL 133

Query: 138 AAGAKGERRSLPNATIMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYSKHTSQPIDT 197
           AAGAKGERR+LPNATIMIHQPSGGYSGQAKD+TIHTK+I+R+W++LN LYSKHTSQP+D 
Sbjct: 134 AAGAKGERRALPNATIMIHQPSGGYSGQAKDMTIHTKEIIRIWESLNGLYSKHTSQPVDV 193

Query: 198 IKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGSQGKDKG 244
           I++ MDRDYFMTPEEAKEFGIIDEV+D+RP+ LVTDAVGS+GK KG
Sbjct: 194 IEKNMDRDYFMTPEEAKEFGIIDEVIDERPLTLVTDAVGSEGKGKG 239

[Close]
BLAST of CmoCh01G002610 vs. TAIR10
Match: AT5G23140.1 (AT5G23140.1 nuclear-encoded CLP protease P7)

HSP 1 Score: 382.5 bits (981), Expect = 2.0e-106
Identity = 192/242 (79.34%), Postives = 215/242 (88.84%), Query Frame = 1 

Query: 4   RRLASTSSMLLAKSTALANGRTAARDFRRGYSLIPMVIEHTSRGERAYDIFSRLLKERII 63
           R L S + ML +  +++A   T+    RR YSLIPMVIEH+SRGERAYDIFSRLLKERII
Sbjct: 3   RGLVSGAKMLSSTPSSMA---TSIATGRRSYSLIPMVIEHSSRGERAYDIFSRLLKERII 62

Query: 64  CINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINT 123
           CINGPI+DDT+HVVVAQLL+LESENPSKPI+MYLNSPGG VTAGLAIYDTMQYIRSPI+T
Sbjct: 63  CINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIYDTMQYIRSPIST 122

Query: 124 ICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDITIHTKQIVRVWDAL 183
           ICLGQAASMASLLLAAGAKG+RRSLPNAT+MIHQPSGGYSGQAKDITIHTKQIVRVWDAL
Sbjct: 123 ICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITIHTKQIVRVWDAL 182

Query: 184 NELYSKHTSQPIDTIKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGSQGKDKG 243
           NELY KHT QP+D +   MDRD+FMTPEEAK FGIIDEV+D+RP+ LV DAVG++ KDK 
Sbjct: 183 NELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDERPLELVKDAVGNESKDKS 241

Query: 244 SN 246
           S+
Sbjct: 243 SS 241

[Close]
BLAST of CmoCh01G002610 vs. TAIR10
Match: AT1G02560.1 (AT1G02560.1 nuclear encoded CLP protease 5)

HSP 1 Score: 180.6 bits (457), Expect = 1.1e-45
Identity = 88/176 (50.00%), Postives = 126/176 (71.59%), Query Frame = 1 

Query: 48  ERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAG 107
           ER   I S+L + RII   G + DD A+++VAQLL+L++ +P+K I MY+NSPGG+VTAG
Sbjct: 110 ERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAG 169

Query: 108 LAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAK 167
           +AI+DTM++IR  ++T+C+G AASM + LL+AG KG+R SLPN+ IMIHQP GG  G   
Sbjct: 170 MAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQT 229

Query: 168 DITIHTKQIVRVWDALNELYSKHTSQPIDTIKEYMDRDYFMTPEEAKEFGIIDEVM 224
           DI I   +++     LN   + HT Q ++ I +  DRD+FM+ +EAKE+G+ID V+
Sbjct: 230 DIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 285

[Close]
BLAST of CmoCh01G002610 vs. TAIR10
Match: AT1G66670.1 (AT1G66670.1 CLP protease proteolytic subunit 3)

HSP 1 Score: 162.5 bits (410), Expect = 3.2e-40
Identity = 74/180 (41.11%), Postives = 125/180 (69.44%), Query Frame = 1 

Query: 52  DIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIY 111
           D  + LL++RI+ +   + D TA +V++QLL L++E+  + I +++NSPGG++TAG+ IY
Sbjct: 85  DTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIY 144

Query: 112 DTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDITI 171
           D M+  ++ ++T+CLG AASM + LLA+G+KG+R  +PN+ +MIHQP G   G+A +++I
Sbjct: 145 DAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSI 204

Query: 172 HTKQIVRVWDALNELYSKHTSQPIDTIKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALV 231
             ++++     LN+++S+ T +P   I+   DRD F+ P EAKE+G+ID V+D     L+
Sbjct: 205 RIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGKPGLI 264

[Close]
BLAST of CmoCh01G002610 vs. TAIR10
Match: AT5G45390.1 (AT5G45390.1 CLP protease P4)

HSP 1 Score: 160.6 bits (405), Expect = 1.2e-39
Identity = 78/183 (42.62%), Postives = 125/183 (68.31%), Query Frame = 1 

Query: 42  EHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPG 101
           E   RG  + D+   LL+ERI+ +   I D  A  +++QLL L++++P K I +++NSPG
Sbjct: 70  ESAIRGAES-DVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPG 129

Query: 102 GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGG 161
           G+++A +AIYD +Q +R+ ++TI LG AAS AS++L AG KG+R ++PN  IMIHQP GG
Sbjct: 130 GSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGG 189

Query: 162 YSGQAKDITIHTKQIVRVWDALNELYSKHTSQPIDTIKEYMDRDYFMTPEEAKEFGIIDE 221
            SGQA D+ I  K+++   + +  + +  TS+  + + + +DRD +M+P EA E+G+ID 
Sbjct: 190 ASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDG 249

Query: 222 VMD 225
           V+D
Sbjct: 250 VID 251

[Close]
BLAST of CmoCh01G002610 vs. TAIR10
Match: AT1G11750.2 (AT1G11750.2 CLP protease proteolytic subunit 6)

HSP 1 Score: 141.4 bits (355), Expect = 7.6e-34
Identity = 68/173 (39.31%), Postives = 105/173 (60.69%), Query Frame = 1 

Query: 52  DIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIY 111
           D+ S L + RII I  PI+   A  V++QL+ L S +    I MYLN PGG+  + LAIY
Sbjct: 114 DLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLAIY 173

Query: 112 DTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDITI 171
           D M +I+  + T+  G AAS  +LLLA G KG R ++PN  +MIHQP  G  G  +D+  
Sbjct: 174 DCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVEDVRR 233

Query: 172 HTKQIVRVWDALNELYSKHTSQPIDTIKEYMDRDYFMTPEEAKEFGIIDEVMD 225
              + +     ++ +Y+  T QP++ +++Y +RD F++  EA EFG+ID +++
Sbjct: 234 QVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDGLLE 286

[Close]
BLAST of CmoCh01G002610 vs. NCBI nr
Match: gi|659123800|ref|XP_008461846.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Cucumis melo])

HSP 1 Score: 448.7 bits (1153), Expect = 6.3e-123
Identity = 224/242 (92.56%), Postives = 234/242 (96.69%), Query Frame = 1 

Query: 1   MIWRRLASTSSMLLAKSTALANGRTAARDFRRGYSLIPMVIEHTSRGERAYDIFSRLLKE 60
           MIWR LASTS +L AKSTA A+GRTA RDFRR YSL+PMVIEHTSRGERAYDIFSRLLKE
Sbjct: 1   MIWRSLASTSMLLAAKSTASASGRTAMRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKE 60

Query: 61  RIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSP 120
           RIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSP
Sbjct: 61  RIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSP 120

Query: 121 INTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDITIHTKQIVRVW 180
           INTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKD+TIHTKQIVRVW
Sbjct: 121 INTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVW 180

Query: 181 DALNELYSKHTSQPIDTIKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGSQGK 240
           DALNELYSKHTSQ +D I++YMDRDYFMTPEEAKEFGIIDEV+DQRPIALVTDAVG++GK
Sbjct: 181 DALNELYSKHTSQSVDIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGNEGK 240

Query: 241 DK 243
           DK
Sbjct: 241 DK 242

[Close]
BLAST of CmoCh01G002610 vs. NCBI nr
Match: gi|449461681|ref|XP_004148570.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Cucumis sativus])

HSP 1 Score: 441.8 bits (1135), Expect = 7.8e-121
Identity = 221/242 (91.32%), Postives = 233/242 (96.28%), Query Frame = 1 

Query: 1   MIWRRLASTSSMLLAKSTALANGRTAARDFRRGYSLIPMVIEHTSRGERAYDIFSRLLKE 60
           MIWR LASTS +L AKSTA A GRTA RDFRR YSL+PMVIEHTSRGERAYDIFSRLLKE
Sbjct: 1   MIWRSLASTSMLLAAKSTASACGRTAMRDFRRPYSLVPMVIEHTSRGERAYDIFSRLLKE 60

Query: 61  RIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSP 120
           RIICINGPISDDTAHVVVAQLLFLESENP+KPI+MYLNSPGGAVTAGLAIYDTMQYIRSP
Sbjct: 61  RIICINGPISDDTAHVVVAQLLFLESENPTKPISMYLNSPGGAVTAGLAIYDTMQYIRSP 120

Query: 121 INTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDITIHTKQIVRVW 180
           INTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKD+TIHTKQIVRVW
Sbjct: 121 INTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVW 180

Query: 181 DALNELYSKHTSQPIDTIKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGSQGK 240
           DALNELYSKHTSQ ++ I++YMDRDYFMTPEEAKEFGIIDEV+DQRPIALVTDAVG++GK
Sbjct: 181 DALNELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGNEGK 240

Query: 241 DK 243
           DK
Sbjct: 241 DK 242

[Close]
BLAST of CmoCh01G002610 vs. NCBI nr
Match: gi|731354616|ref|XP_010688696.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 398.7 bits (1023), Expect = 7.5e-108
Identity = 195/230 (84.78%), Postives = 217/230 (94.35%), Query Frame = 1 

Query: 16  KSTALANGRTAARDFRRGYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAH 75
           +S + +NG  +++  R  YSLIPMVIEH+SRGERAYDIFSRLLKERIICINGPI+DDTAH
Sbjct: 13  RSLSSSNGLLSSQSCR-AYSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPIADDTAH 72

Query: 76  VVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASL 135
           VVVAQLL+LESENPSKPI+MYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASL
Sbjct: 73  VVVAQLLYLESENPSKPIHMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASL 132

Query: 136 LLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYSKHTSQPI 195
           LLAAG KGERR+LPNAT+M+HQPSGGYSGQAKD+TIHTKQIVRVWD+LNELYSKHT QP+
Sbjct: 133 LLAAGTKGERRALPNATVMVHQPSGGYSGQAKDMTIHTKQIVRVWDSLNELYSKHTGQPV 192

Query: 196 DTIKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGSQGKDKGSN 246
           D I++YMDRDYFMTPEEAKEFGIIDEV+DQRPIALV+DAV ++ KDKGSN
Sbjct: 193 DNIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVSDAVANEDKDKGSN 241

[Close]
BLAST of CmoCh01G002610 vs. NCBI nr
Match: gi|147797194|emb|CAN64666.1| (hypothetical protein VITISV_024612 [Vitis vinifera])

HSP 1 Score: 392.1 bits (1006), Expect = 7.0e-106
Identity = 189/214 (88.32%), Postives = 207/214 (96.73%), Query Frame = 1 

Query: 32  RGYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSK 91
           R Y+LIPMVIEH+SRGERAYDIFSRLLKERI+CINGPISDDTAHVVVAQLLFLESENPSK
Sbjct: 6   RSYALIPMVIEHSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSK 65

Query: 92  PINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNA 151
           PI+MYLNSPGGAV+AGLAIYDTMQYIRSP+NTICLGQAASM SLLLAAGAKGERR+LPNA
Sbjct: 66  PIHMYLNSPGGAVSAGLAIYDTMQYIRSPVNTICLGQAASMGSLLLAAGAKGERRALPNA 125

Query: 152 TIMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYSKHTSQPIDTIKEYMDRDYFMTPE 211
           TIMIHQPSGGYSGQAKD+TIHTKQI+RVWD+LN LY+KHT Q +D I++ MDRDYFMTPE
Sbjct: 126 TIMIHQPSGGYSGQAKDMTIHTKQIIRVWDSLNALYAKHTGQSLDIIQKNMDRDYFMTPE 185

Query: 212 EAKEFGIIDEVMDQRPIALVTDAVGSQGKDKGSN 246
           EAKEFGIIDEV+DQRP+ALVTDAVG++GKDKGSN
Sbjct: 186 EAKEFGIIDEVIDQRPMALVTDAVGNEGKDKGSN 219

[Close]
BLAST of CmoCh01G002610 vs. NCBI nr
Match: gi|225423749|ref|XP_002277069.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Vitis vinifera])

HSP 1 Score: 392.1 bits (1006), Expect = 7.0e-106
Identity = 195/236 (82.63%), Postives = 214/236 (90.68%), Query Frame = 1 

Query: 14  LAKSTALANGR----TAARDFRRGYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPI 73
           L K  + A GR     A     R Y+LIPMVIEH+SRGERAYDIFSRLLKERI+CINGPI
Sbjct: 4   LTKLCSAATGRRLFPAATAVSTRSYALIPMVIEHSSRGERAYDIFSRLLKERIVCINGPI 63

Query: 74  SDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQA 133
           SDDTAHVVVAQLLFLESENPSKPI+MYLNSPGGAV+AGLAIYDTMQYIRSP+NTICLGQA
Sbjct: 64  SDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGAVSAGLAIYDTMQYIRSPVNTICLGQA 123

Query: 134 ASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYSK 193
           ASM SLLLAAGAKGERR+LPNATIMIHQPSGGYSGQAKD+TIHTKQI+RVWD+LN LY+K
Sbjct: 124 ASMGSLLLAAGAKGERRALPNATIMIHQPSGGYSGQAKDMTIHTKQIIRVWDSLNALYAK 183

Query: 194 HTSQPIDTIKEYMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGSQGKDKGSN 246
           HT Q +D I++ MDRDYFMTPEEAKEFGIIDEV+DQRP+ALVTDAVG++GKDKGSN
Sbjct: 184 HTGQSLDIIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVGNEGKDKGSN 239

The following BLAST results are available for this feature:
BLAST of CmoCh01G002610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CLPP2_ARATH3.5e-10579.34ATP-dependent Clp protease proteolytic subunit 2, mitochondrial OS=Arabidopsis t... [more]
CLPP_PELTS7.4e-7166.15ATP-dependent Clp protease proteolytic subunit OS=Pelotomaculum thermopropionicu... [more]
CLPP_BARHE1.6e-7065.10ATP-dependent Clp protease proteolytic subunit OS=Bartonella henselae (strain AT... [more]
CLPP_BRUSI3.6e-7063.08ATP-dependent Clp protease proteolytic subunit OS=Brucella suis (strain ATCC 234... [more]
CLPP_BRUA13.6e-7063.08ATP-dependent Clp protease proteolytic subunit OS=Brucella abortus (strain S19) ... [more]
BLAST of CmoCh01G002610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LC78_CUCSA5.4e-12191.32ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=Csa_3G65341... [more]
A0A0J8BRK0_BETVU5.2e-10884.78ATP-dependent Clp protease proteolytic subunit OS=Beta vulgaris subsp. vulgaris ... [more]
A5AL82_VITVI4.9e-10688.32ATP-dependent Clp protease proteolytic subunit OS=Vitis vinifera GN=VITISV_02461... [more]
F6HF49_VITVI4.9e-10682.63ATP-dependent Clp protease proteolytic subunit OS=Vitis vinifera GN=VIT_01s0011g... [more]
A0A103Y9Z4_CYNCS1.1e-10584.51ATP-dependent Clp protease proteolytic subunit OS=Cynara cardunculus var. scolym... [more]
BLAST of CmoCh01G002610 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G23140.12.0e-10679.34 nuclear-encoded CLP protease P7[more]
AT1G02560.11.1e-4550.00 nuclear encoded CLP protease 5[more]
AT1G66670.13.2e-4041.11 CLP protease proteolytic subunit 3[more]
AT5G45390.11.2e-3942.62 CLP protease P4[more]
AT1G11750.27.6e-3439.31 CLP protease proteolytic subunit 6[more]
BLAST of CmoCh01G002610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659123800|ref|XP_008461846.1|6.3e-12392.56PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Cucu... [more]
gi|449461681|ref|XP_004148570.1|7.8e-12191.32PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Cucu... [more]
gi|731354616|ref|XP_010688696.1|7.5e-10884.78PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Beta... [more]
gi|147797194|emb|CAN64666.1|7.0e-10688.32hypothetical protein VITISV_024612 [Vitis vinifera][more]
gi|225423749|ref|XP_002277069.1|7.0e-10682.63PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Viti... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001907ClpP
IPR018215ClpP_Ser_AS
IPR023562ClpP/TepA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0006508 proteolysis
cellular_component GO:0009840 chloroplastic endopeptidase Clp complex
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0050897 cobalt ion binding
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G002610.1CmoCh01G002610.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001907ATP-dependent Clp protease proteolytic subunitPRINTSPR00127CLPPROTEASEPcoord: 144..163
score: 6.5E-46coord: 123..140
score: 6.5E-46coord: 52..67
score: 6.5E-46coord: 92..112
score: 6.5E-46coord: 201..220
score: 6.5
IPR001907ATP-dependent Clp protease proteolytic subunitHAMAPMF_00444ClpPcoord: 36..226
score: 40
IPR018215ClpP, Ser active sitePROSITEPS00381CLP_PROTEASE_SERcoord: 123..134
scor
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPANTHERPTHR10381ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNITcoord: 4..245
score: 1.0E
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPFAMPF00574CLP_proteasecoord: 45..225
score: 1.2
NoneNo IPR availablePANTHERPTHR10381:SF11ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT, MITOCHONDRIAL-RELATEDcoord: 4..245
score: 1.0E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh01G002610Cucsa.192270Cucumber (Gy14) v1cgycmoB0558
CmoCh01G002610CmaCh14G009720Cucurbita maxima (Rimu)cmacmoB257
CmoCh01G002610CmaCh01G002510Cucurbita maxima (Rimu)cmacmoB468
CmoCh01G002610Cla017308Watermelon (97103) v1cmowmB410
CmoCh01G002610Csa3G653410Cucumber (Chinese Long) v2cmocuB437
CmoCh01G002610MELO3C024021Melon (DHL92) v3.5.1cmomeB416
CmoCh01G002610ClCG10G011980Watermelon (Charleston Gray)cmowcgB385
CmoCh01G002610CSPI03G28990Wild cucumber (PI 183967)cmocpiB441
CmoCh01G002610Lsi03G011690Bottle gourd (USVL1VR-Ls)cmolsiB409
CmoCh01G002610Cp4.1LG02g15890Cucurbita pepo (Zucchini)cmocpeB449
CmoCh01G002610Cp4.1LG03g04850Cucurbita pepo (Zucchini)cmocpeB453
CmoCh01G002610MELO3C024021.2Melon (DHL92) v3.6.1cmomedB476
CmoCh01G002610CsaV3_3G031380Cucumber (Chinese Long) v3cmocucB0527
CmoCh01G002610Cla97C10G194790Watermelon (97103) v2cmowmbB426
CmoCh01G002610Bhi11G001136Wax gourdcmowgoB0551
CmoCh01G002610CsGy3G026880Cucumber (Gy14) v2cgybcmoB335
CmoCh01G002610Carg11195Silver-seed gourdcarcmoB1105
CmoCh01G002610Carg07344Silver-seed gourdcarcmoB1033
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh01G002610CmoCh14G009950Cucurbita moschata (Rifu)cmocmoB203
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh01G002610Melon (DHL92) v3.6.1cmomedB449
CmoCh01G002610Silver-seed gourdcarcmoB0153
CmoCh01G002610Silver-seed gourdcarcmoB0609
CmoCh01G002610Cucumber (Chinese Long) v3cmocucB0530
CmoCh01G002610Cucumber (Chinese Long) v3cmocucB0582
CmoCh01G002610Watermelon (97103) v2cmowmbB493
CmoCh01G002610Wax gourdcmowgoB0606
CmoCh01G002610Cucurbita moschata (Rifu)cmocmoB299
CmoCh01G002610Cucurbita moschata (Rifu)cmocmoB378
CmoCh01G002610Cucumber (Gy14) v1cgycmoB0341
CmoCh01G002610Cucumber (Gy14) v1cgycmoB0560
CmoCh01G002610Cucurbita maxima (Rimu)cmacmoB354
CmoCh01G002610Cucurbita maxima (Rimu)cmacmoB905
CmoCh01G002610Wild cucumber (PI 183967)cmocpiB444
CmoCh01G002610Wild cucumber (PI 183967)cmocpiB492
CmoCh01G002610Cucumber (Chinese Long) v2cmocuB440
CmoCh01G002610Cucumber (Chinese Long) v2cmocuB485
CmoCh01G002610Melon (DHL92) v3.5.1cmomeB395
CmoCh01G002610Watermelon (Charleston Gray)cmowcgB375
CmoCh01G002610Watermelon (97103) v1cmowmB400
CmoCh01G002610Cucurbita pepo (Zucchini)cmocpeB425
CmoCh01G002610Cucurbita pepo (Zucchini)cmocpeB430
CmoCh01G002610Bottle gourd (USVL1VR-Ls)cmolsiB404
CmoCh01G002610Cucumber (Gy14) v2cgybcmoB337
CmoCh01G002610Cucumber (Gy14) v2cgybcmoB921