Cp4.1LG03g03790 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAATGGTTTCCCTTTCGCCATCTTCTTCTTCGCTTCAAATTTTCCCATCATCTTCATCGCTGAAAGCCCTTTTACAGACGCTAATTCTCTCTCTAGCCCGAGCCATTTCTCGAGCCAAAACGACGGCGCTTCACATCCTAAAACAGGCCAACCACCAATCCGCCATAGCTTTCAAGAGGAACAAGAACAAGCTCCTCTTCGGCTCCTTCAGACTCCATTACAACTGGTGCTCCTCCTCCAATTATCACGTGGCTCCCCCACCGCTCACGTGGGATGACAACTCCGCCGCCGGCGCCGCCGACCACCTTACTGGGTACTTGCAGTGGCTGGAACACAAAGATAAAGAAGAGGAATTATGTCGGCACGTTAATGAAATTGATAAATTAGCAGATATTTTTATTGCCAGGTGTCATGAGAAATTCAGGCTCGAAAAACAGGAGTCTTACCGGAAATTTCAAGAGATGGCGGCAAGAAGCTTATAA ATGAAAATGGTTTCCCTTTCGCCATCTTCTTCTTCGCTTCAAATTTTCCCATCATCTTCATCGCTGAAAGCCCTTTTACAGACGCTAATTCTCTCTCTAGCCCGAGCCATTTCTCGAGCCAAAACGACGGCGCTTCACATCCTAAAACAGGCCAACCACCAATCCGCCATAGCTTTCAAGAGGAACAAGAACAAGCTCCTCTTCGGCTCCTTCAGACTCCATTACAACTGGTGCTCCTCCTCCAATTATCACGTGGCTCCCCCACCGCTCACGTGGGATGACAACTCCGCCGCCGGCGCCGCCGACCACCTTACTGGGTACTTGCAGTGGCTGGAACACAAAGATAAAGAAGAGGAATTATGTCGGCACGTTAATGAAATTGATAAATTAGCAGATATTTTTATTGCCAGGTGTCATGAGAAATTCAGGCTCGAAAAACAGGAGTCTTACCGGAAATTTCAAGAGATGGCGGCAAGAAGCTTATAA ATGAAAATGGTTTCCCTTTCGCCATCTTCTTCTTCGCTTCAAATTTTCCCATCATCTTCATCGCTGAAAGCCCTTTTACAGACGCTAATTCTCTCTCTAGCCCGAGCCATTTCTCGAGCCAAAACGACGGCGCTTCACATCCTAAAACAGGCCAACCACCAATCCGCCATAGCTTTCAAGAGGAACAAGAACAAGCTCCTCTTCGGCTCCTTCAGACTCCATTACAACTGGTGCTCCTCCTCCAATTATCACGTGGCTCCCCCACCGCTCACGTGGGATGACAACTCCGCCGCCGGCGCCGCCGACCACCTTACTGGGTACTTGCAGTGGCTGGAACACAAAGATAAAGAAGAGGAATTATGTCGGCACGTTAATGAAATTGATAAATTAGCAGATATTTTTATTGCCAGGTGTCATGAGAAATTCAGGCTCGAAAAACAGGAGTCTTACCGGAAATTTCAAGAGATGGCGGCAAGAAGCTTATAA MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWDDNSAAGAADHLTGYLQWLEHKDKEEELCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
BLAST of Cp4.1LG03g03790 vs. TrEMBL
Match: A0A0A0LBV5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G809400 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 9.3e-37 Identity = 104/178 (58.43%), Postives = 117/178 (65.73%), Query Frame = 1
BLAST of Cp4.1LG03g03790 vs. TrEMBL
Match: A0A0A0KP26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G523130 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.2e-28 Identity = 93/194 (47.94%), Postives = 117/194 (60.31%), Query Frame = 1
BLAST of Cp4.1LG03g03790 vs. TrEMBL
Match: A0A162AC76_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_013556 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 2.5e-26 Identity = 78/165 (47.27%), Postives = 102/165 (61.82%), Query Frame = 1
BLAST of Cp4.1LG03g03790 vs. TrEMBL
Match: A0A067JKV5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25527 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 4.3e-26 Identity = 86/180 (47.78%), Postives = 112/180 (62.22%), Query Frame = 1
BLAST of Cp4.1LG03g03790 vs. TrEMBL
Match: A0A022PWE7_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a013944mg PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 5.6e-26 Identity = 85/188 (45.21%), Postives = 111/188 (59.04%), Query Frame = 1
BLAST of Cp4.1LG03g03790 vs. TAIR10
Match: AT3G57950.1 (AT3G57950.1 unknown protein) HSP 1 Score: 108.6 bits (270), Expect = 3.6e-24 Identity = 81/185 (43.78%), Postives = 102/185 (55.14%), Query Frame = 1
BLAST of Cp4.1LG03g03790 vs. TAIR10
Match: AT5G06790.1 (AT5G06790.1 unknown protein) HSP 1 Score: 96.3 bits (238), Expect = 1.9e-20 Identity = 82/198 (41.41%), Postives = 103/198 (52.02%), Query Frame = 1
BLAST of Cp4.1LG03g03790 vs. TAIR10
Match: AT2G42180.1 (AT2G42180.1 unknown protein) HSP 1 Score: 63.2 bits (152), Expect = 1.7e-10 Identity = 69/184 (37.50%), Postives = 87/184 (47.28%), Query Frame = 1
BLAST of Cp4.1LG03g03790 vs. NCBI nr
Match: gi|659085786|ref|XP_008443602.1| (PREDICTED: uncharacterized protein LOC103487158 [Cucumis melo]) HSP 1 Score: 162.9 bits (411), Expect = 4.6e-37 Identity = 107/180 (59.44%), Postives = 118/180 (65.56%), Query Frame = 1
BLAST of Cp4.1LG03g03790 vs. NCBI nr
Match: gi|700204180|gb|KGN59313.1| (hypothetical protein Csa_3G809400 [Cucumis sativus]) HSP 1 Score: 161.4 bits (407), Expect = 1.3e-36 Identity = 104/178 (58.43%), Postives = 117/178 (65.73%), Query Frame = 1
BLAST of Cp4.1LG03g03790 vs. NCBI nr
Match: gi|778703677|ref|XP_011655408.1| (PREDICTED: uncharacterized protein LOC105435523 [Cucumis sativus]) HSP 1 Score: 134.4 bits (337), Expect = 1.7e-28 Identity = 93/194 (47.94%), Postives = 117/194 (60.31%), Query Frame = 1
BLAST of Cp4.1LG03g03790 vs. NCBI nr
Match: gi|659117803|ref|XP_008458796.1| (PREDICTED: uncharacterized protein LOC103498096 [Cucumis melo]) HSP 1 Score: 132.5 bits (332), Expect = 6.6e-28 Identity = 90/181 (49.72%), Postives = 111/181 (61.33%), Query Frame = 1
BLAST of Cp4.1LG03g03790 vs. NCBI nr
Match: gi|1021041301|gb|KZM99082.1| (hypothetical protein DCAR_013556 [Daucus carota subsp. sativus]) HSP 1 Score: 126.7 bits (317), Expect = 3.6e-26 Identity = 78/165 (47.27%), Postives = 102/165 (61.82%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|