CmoCh14G004310 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAATGGTTTCCCTTTCGCCATCTTCTTCTTCGCTTCAAATTTTCCCATCATCTTCATCGCTCAAAGCCCTTTTACAGACGCTAATTCTCTCTCTAGCCCGAGCCATTTCTCGAGCCAAAACGACGGCGCTTCACATCCTAAAACAGGCCAACCACCAATCCGCCATAGCTTTCAAGAGGAACAAGAACAAGCTCCTCTTCGGCTCCTTCAGACTCCATTACAACTGGTGCTCCTCCTCCAATTATCACGTGGCTCCCCCGCCGCTCACGTGGGGTGACAACTCCGCCGCCGACCACCTTGCTGGGTACTTGCAGTGGCTGGAAGACAGAGATAAAGAAGAGGAATTATGTCGCCACGTTAATGAAATTGATAAATTAGCAGATATTTTTATTGCCAGGTGTCATGAGAAATTCAGGCTCGAAAAACAGGAGTCTTACCGGAAATTTCAAGAGATGGCGGCAAGAAGCTTATGA ATGAAAATGGTTTCCCTTTCGCCATCTTCTTCTTCGCTTCAAATTTTCCCATCATCTTCATCGCTCAAAGCCCTTTTACAGACGCTAATTCTCTCTCTAGCCCGAGCCATTTCTCGAGCCAAAACGACGGCGCTTCACATCCTAAAACAGGCCAACCACCAATCCGCCATAGCTTTCAAGAGGAACAAGAACAAGCTCCTCTTCGGCTCCTTCAGACTCCATTACAACTGGTGCTCCTCCTCCAATTATCACGTGGCTCCCCCGCCGCTCACGTGGGGTGACAACTCCGCCGCCGACCACCTTGCTGGGTACTTGCAGTGGCTGGAAGACAGAGATAAAGAAGAGGAATTATGTCGCCACGTTAATGAAATTGATAAATTAGCAGATATTTTTATTGCCAGGTGTCATGAGAAATTCAGGCTCGAAAAACAGGAGTCTTACCGGAAATTTCAAGAGATGGCGGCAAGAAGCTTATGA ATGAAAATGGTTTCCCTTTCGCCATCTTCTTCTTCGCTTCAAATTTTCCCATCATCTTCATCGCTCAAAGCCCTTTTACAGACGCTAATTCTCTCTCTAGCCCGAGCCATTTCTCGAGCCAAAACGACGGCGCTTCACATCCTAAAACAGGCCAACCACCAATCCGCCATAGCTTTCAAGAGGAACAAGAACAAGCTCCTCTTCGGCTCCTTCAGACTCCATTACAACTGGTGCTCCTCCTCCAATTATCACGTGGCTCCCCCGCCGCTCACGTGGGGTGACAACTCCGCCGCCGACCACCTTGCTGGGTACTTGCAGTGGCTGGAAGACAGAGATAAAGAAGAGGAATTATGTCGCCACGTTAATGAAATTGATAAATTAGCAGATATTTTTATTGCCAGGTGTCATGAGAAATTCAGGCTCGAAAAACAGGAGTCTTACCGGAAATTTCAAGAGATGGCGGCAAGAAGCTTATGA
BLAST of CmoCh14G004310 vs. TrEMBL
Match: A0A0A0LBV5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G809400 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 1.5e-36 Identity = 104/178 (58.43%), Postives = 117/178 (65.73%), Query Frame = 1
BLAST of CmoCh14G004310 vs. TrEMBL
Match: A0A0A0KP26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G523130 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 5.9e-28 Identity = 93/194 (47.94%), Postives = 115/194 (59.28%), Query Frame = 1
BLAST of CmoCh14G004310 vs. TrEMBL
Match: A0A067JKV5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25527 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 2.5e-26 Identity = 85/180 (47.22%), Postives = 109/180 (60.56%), Query Frame = 1
BLAST of CmoCh14G004310 vs. TrEMBL
Match: A0A0B2QPA7_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_044841 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.6e-25 Identity = 87/187 (46.52%), Postives = 111/187 (59.36%), Query Frame = 1
BLAST of CmoCh14G004310 vs. TrEMBL
Match: I1L2N3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G112700 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.6e-25 Identity = 87/187 (46.52%), Postives = 111/187 (59.36%), Query Frame = 1
BLAST of CmoCh14G004310 vs. TAIR10
Match: AT3G57950.1 (AT3G57950.1 unknown protein) HSP 1 Score: 106.7 bits (265), Expect = 1.3e-23 Identity = 79/185 (42.70%), Postives = 102/185 (55.14%), Query Frame = 1
BLAST of CmoCh14G004310 vs. TAIR10
Match: AT5G06790.1 (AT5G06790.1 unknown protein) HSP 1 Score: 97.1 bits (240), Expect = 1.1e-20 Identity = 82/198 (41.41%), Postives = 102/198 (51.52%), Query Frame = 1
BLAST of CmoCh14G004310 vs. TAIR10
Match: AT2G42180.1 (AT2G42180.1 unknown protein) HSP 1 Score: 63.9 bits (154), Expect = 1.0e-10 Identity = 70/184 (38.04%), Postives = 87/184 (47.28%), Query Frame = 1
BLAST of CmoCh14G004310 vs. NCBI nr
Match: gi|659085786|ref|XP_008443602.1| (PREDICTED: uncharacterized protein LOC103487158 [Cucumis melo]) HSP 1 Score: 161.0 bits (406), Expect = 1.7e-36 Identity = 106/180 (58.89%), Postives = 118/180 (65.56%), Query Frame = 1
BLAST of CmoCh14G004310 vs. NCBI nr
Match: gi|700204180|gb|KGN59313.1| (hypothetical protein Csa_3G809400 [Cucumis sativus]) HSP 1 Score: 160.6 bits (405), Expect = 2.2e-36 Identity = 104/178 (58.43%), Postives = 117/178 (65.73%), Query Frame = 1
BLAST of CmoCh14G004310 vs. NCBI nr
Match: gi|778703677|ref|XP_011655408.1| (PREDICTED: uncharacterized protein LOC105435523 [Cucumis sativus]) HSP 1 Score: 132.1 bits (331), Expect = 8.5e-28 Identity = 93/194 (47.94%), Postives = 115/194 (59.28%), Query Frame = 1
BLAST of CmoCh14G004310 vs. NCBI nr
Match: gi|659117803|ref|XP_008458796.1| (PREDICTED: uncharacterized protein LOC103498096 [Cucumis melo]) HSP 1 Score: 130.2 bits (326), Expect = 3.2e-27 Identity = 90/181 (49.72%), Postives = 109/181 (60.22%), Query Frame = 1
BLAST of CmoCh14G004310 vs. NCBI nr
Match: gi|802750473|ref|XP_012087802.1| (PREDICTED: uncharacterized protein LOC105646548 [Jatropha curcas]) HSP 1 Score: 126.7 bits (317), Expect = 3.6e-26 Identity = 85/180 (47.22%), Postives = 109/180 (60.56%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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