Cla017533 (gene) Watermelon (97103) v1

NameCla017533
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr10 : 23691550 .. 23692065 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCCCTTAATTCTTCTTCACTTCAAGTTTTGCCTTCGCCTTCATCTTCAAGCTTAAGATTAGTGAAATTCAAAGCTATTTTGCAGACTCTCATTCTTTCTCTGGCCAGAGCTATCTCCCGAGCCAAAACCACGGCGCTTCACATCTTAAAACAAGCCAATTATCAATCCGCCATAGCTTTGAAGAGGAACAAGAAGAAGCTTCTTTATGGCTCCTTCAGACTCCACTACAATTGGTGCTCTGTTTCTTCTAATAAATATTCTCACGTCACTCCCGCAGTGCTCACCTGGGACCATGAATACTCCGGCGCCGGCGCCGGTGGCGACCAGCTTCGTGGGTATTTGCAGTGGCTGGAGGAAAGAGATATTAATAAGATTAAAGATGAAGATGAAGATGTTAATGAGATTGATAAATTGGCTGAGATTTTTATTGCAAGGTGTCACGAGAAATTCAAGCTTGAAAAACAAGAGTCTTATAGGAGATTTCAAGACATGATGGCTAGAAGCTTTTGA

mRNA sequence

ATGGGTTCCCTTAATTCTTCTTCACTTCAAGTTTTGCCTTCGCCTTCATCTTCAAGCTTAAGATTAGTGAAATTCAAAGCTATTTTGCAGACTCTCATTCTTTCTCTGGCCAGAGCTATCTCCCGAGCCAAAACCACGGCGCTTCACATCTTAAAACAAGCCAATTATCAATCCGCCATAGCTTTGAAGAGGAACAAGAAGAAGCTTCTTTATGGCTCCTTCAGACTCCACTACAATTGGTGCTCTGTTTCTTCTAATAAATATTCTCACGTCACTCCCGCAGTGCTCACCTGGGACCATGAATACTCCGGCGCCGGCGCCGGTGGCGACCAGCTTCGTGGGTATTTGCAGTGGCTGGAGGAAAGAGATATTAATAAGATTAAAGATGAAGATGAAGATGTTAATGAGATTGATAAATTGGCTGAGATTTTTATTGCAAGGTGTCACGAGAAATTCAAGCTTGAAAAACAAGAGTCTTATAGGAGATTTCAAGACATGATGGCTAGAAGCTTTTGA

Coding sequence (CDS)

ATGGGTTCCCTTAATTCTTCTTCACTTCAAGTTTTGCCTTCGCCTTCATCTTCAAGCTTAAGATTAGTGAAATTCAAAGCTATTTTGCAGACTCTCATTCTTTCTCTGGCCAGAGCTATCTCCCGAGCCAAAACCACGGCGCTTCACATCTTAAAACAAGCCAATTATCAATCCGCCATAGCTTTGAAGAGGAACAAGAAGAAGCTTCTTTATGGCTCCTTCAGACTCCACTACAATTGGTGCTCTGTTTCTTCTAATAAATATTCTCACGTCACTCCCGCAGTGCTCACCTGGGACCATGAATACTCCGGCGCCGGCGCCGGTGGCGACCAGCTTCGTGGGTATTTGCAGTGGCTGGAGGAAAGAGATATTAATAAGATTAAAGATGAAGATGAAGATGTTAATGAGATTGATAAATTGGCTGAGATTTTTATTGCAAGGTGTCACGAGAAATTCAAGCTTGAAAAACAAGAGTCTTATAGGAGATTTCAAGACATGATGGCTAGAAGCTTTTGA

Protein sequence

MGSLNSSSLQVLPSPSSSSLRLVKFKAILQTLILSLARAISRAKTTALHILKQANYQSAIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTWDHEYSGAGAGGDQLRGYLQWLEERDINKIKDEDEDVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARSF
BLAST of Cla017533 vs. TrEMBL
Match: A0A0A0LBV5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G809400 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 4.5e-66
Identity = 142/180 (78.89%), Postives = 151/180 (83.89%), Query Frame = 1

Query: 3   SLNSSSLQVLPSPSSSSLRL-VKFKAILQTLILSLARAISRAKTTALHILKQANYQSA-I 62
           S +SSSLQVLPSPSSS+LRL +KFKA+LQTLILSLARAISRAKTTA        +QSA  
Sbjct: 6   SSSSSSLQVLPSPSSSTLRLAIKFKALLQTLILSLARAISRAKTTA--------FQSANT 65

Query: 63  ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTWDHEYSGAGAGGDQLRGYLQWLE 122
           ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLT DH   G G GGDQL GYLQWLE
Sbjct: 66  ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTCDHGIGGGGGGGDQLGGYLQWLE 125

Query: 123 ERDINK-------IKD--EDEDVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARSF 172
           ERD+NK       ++D  ED+ VNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARSF
Sbjct: 126 ERDVNKKSNHNSNVEDDHEDQSVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARSF 177

BLAST of Cla017533 vs. TrEMBL
Match: A0A0A0KP26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G523130 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.7e-34
Identity = 96/193 (49.74%), Postives = 116/193 (60.10%), Query Frame = 1

Query: 3   SLNSSSLQVLPSPS--------SSSLRLVKFKAILQTLILS----LARAISRAKTTALHI 62
           ++  SS  +LPSP         SS+L  VKFK  + T+I S    LARAISRAK+T +HI
Sbjct: 5   AIGPSSPNILPSPQIFSIKSSHSSTLIFVKFKTFIHTIIFSQFCRLARAISRAKSTVVHI 64

Query: 63  LKQANYQSAIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAV--------LTWDHEY 122
           LK++ +       +NK K+ +GSFRLHYNWCS      SHV P            +DH  
Sbjct: 65  LKKSYHYK----DKNKNKIFFGSFRLHYNWCS------SHVMPVPDPIWELGHFYYDHAT 124

Query: 123 SGAGAGGDQLRGYLQWLEERDINK-----IKDEDEDVNEIDKLAEIFIARCHEKFKLEKQ 171
           S A A G QL GYLQWLEER +             ++NEIDKLAE+FIA CHEKF+LEKQ
Sbjct: 125 STA-ADGSQLSGYLQWLEERKLESETMTTATGTTAEMNEIDKLAEMFIASCHEKFRLEKQ 184

BLAST of Cla017533 vs. TrEMBL
Match: A0A067JKV5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25527 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.8e-30
Identity = 83/178 (46.63%), Postives = 109/178 (61.24%), Query Frame = 1

Query: 14  SPSSSSLRLVKFKAILQTLILS----LARAISRAKTTALHILKQANYQSAIALKRNKKK- 73
           SP SS+L  +K K ++ TLI+S    + RA+S+AKT    ILK+    + I   + +K+ 
Sbjct: 15  SPPSSTLSSMKIKTLIHTLIISHVSRMVRALSKAKTILAQILKENQPVNFILYPKKRKQK 74

Query: 74  ---LLYGSFRLHYNWCSVSSNKYSHVTPAVLTWDHEY-----------SGAGAGGDQLRG 133
              + +GSFRLHYNWC+ SS    HV P   T  H Y           S       QL G
Sbjct: 75  QRNIFFGSFRLHYNWCNTSS----HVLPVPTTEPHLYYDSTWNSIITTSDDLCNESQLSG 134

Query: 134 YLQWLEERDINK--IKDEDEDVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARS 171
           YLQWLE++ + K     + E+VNEID+LA++FIA CHEKF+LEKQESYRRFQ+MMARS
Sbjct: 135 YLQWLEDQKVIKENTDGDQENVNEIDQLADMFIATCHEKFRLEKQESYRRFQEMMARS 188

BLAST of Cla017533 vs. TrEMBL
Match: A0A0D2QHA8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G225600 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.8e-30
Identity = 90/183 (49.18%), Postives = 110/183 (60.11%), Query Frame = 1

Query: 12  LPSPSSSSLRLVKFKAILQTLILS----LARAISRAKTTALHILKQAN------YQSAIA 71
           L SPSS+ L  +K KA++ TL+ +    L RA S+AK+T + I KQ+         S   
Sbjct: 29  LKSPSST-LGFMKIKALIHTLVYAQFYRLIRAFSKAKSTFILICKQSKPIQYLISNSKTT 88

Query: 72  LKRNK-KKLLYGSFRLHYNWCSVSSNKYSHVTPA---VLTWDHEYSGAGAGGDQ------ 131
            K+ K KKL +GSFRLHYNWCS      SHVTP    VL   H    +    DQ      
Sbjct: 89  RKKYKHKKLFFGSFRLHYNWCS------SHVTPVPAPVLEATHSTWNSAVSTDQQCDEDT 148

Query: 132 ----LRGYLQWLEERDINKIKDEDEDVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMM 171
               L GYLQWLEE+  N     + D+NEIDKLAE+FIA CHEKF+LEKQESYRRFQ+M+
Sbjct: 149 VESELSGYLQWLEEKKGNGNSTVETDINEIDKLAEMFIANCHEKFRLEKQESYRRFQEML 204

BLAST of Cla017533 vs. TrEMBL
Match: C6T4N8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.2e-30
Identity = 89/190 (46.84%), Postives = 113/190 (59.47%), Query Frame = 1

Query: 13  PSPSSSSLRLVKFKAILQTLILS----LARAISRAKTTALHILKQANYQSAIALKRNKKK 72
           P PSSS+L  VK K+++ TLI+S    + RA+S+ K T L ILK +N QS      +KKK
Sbjct: 13  PPPSSSALSSVKLKSLIHTLIVSHMCRIIRALSKVKATILEILKGSNNQSNNIHFHHKKK 72

Query: 73  ------LLYGSFRLHYNWCSVSSNKYSHVTPA--------------VLTWDHEYSGAGAG 132
                 +++GSFRLHYNWCS   +K SHV P               +   D +Y      
Sbjct: 73  QKMTKKIIFGSFRLHYNWCS---SKSSHVIPVPARVFEGLPKAGDMIHHHDEQYLYEDCH 132

Query: 133 GD--QLRGYLQWLEERDINKIKDEDED-------VNEIDKLAEIFIARCHEKFKLEKQES 170
            D  QL GYLQWLEE    K++D+D+D       +NEID LAE+FIA CHEKFKLEKQES
Sbjct: 133 DDDSQLAGYLQWLEE----KVQDDDDDKKACGNEMNEIDMLAEMFIANCHEKFKLEKQES 192

BLAST of Cla017533 vs. NCBI nr
Match: gi|700204180|gb|KGN59313.1| (hypothetical protein Csa_3G809400 [Cucumis sativus])

HSP 1 Score: 258.8 bits (660), Expect = 6.5e-66
Identity = 142/180 (78.89%), Postives = 151/180 (83.89%), Query Frame = 1

Query: 3   SLNSSSLQVLPSPSSSSLRL-VKFKAILQTLILSLARAISRAKTTALHILKQANYQSA-I 62
           S +SSSLQVLPSPSSS+LRL +KFKA+LQTLILSLARAISRAKTTA        +QSA  
Sbjct: 6   SSSSSSLQVLPSPSSSTLRLAIKFKALLQTLILSLARAISRAKTTA--------FQSANT 65

Query: 63  ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTWDHEYSGAGAGGDQLRGYLQWLE 122
           ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLT DH   G G GGDQL GYLQWLE
Sbjct: 66  ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTCDHGIGGGGGGGDQLGGYLQWLE 125

Query: 123 ERDINK-------IKD--EDEDVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARSF 172
           ERD+NK       ++D  ED+ VNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARSF
Sbjct: 126 ERDVNKKSNHNSNVEDDHEDQSVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARSF 177

BLAST of Cla017533 vs. NCBI nr
Match: gi|659085786|ref|XP_008443602.1| (PREDICTED: uncharacterized protein LOC103487158 [Cucumis melo])

HSP 1 Score: 258.5 bits (659), Expect = 8.5e-66
Identity = 142/181 (78.45%), Postives = 152/181 (83.98%), Query Frame = 1

Query: 3   SLNSSSLQVLPSPSSSSLRL-VKFKAILQTLILSLARAISRAKTTALHILKQANYQSA-I 62
           S +SSSLQVLPSPSSS+LRL +KFKA+LQTLI SLARAISRAKTTA        +QSA I
Sbjct: 11  SSSSSSLQVLPSPSSSTLRLAIKFKALLQTLIFSLARAISRAKTTA--------FQSANI 70

Query: 63  ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTWDHEYSGAGAGGDQLRGYLQWLE 122
           ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLT+DH   G GAGGDQL GYLQWLE
Sbjct: 71  ALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAVLTFDHGI-GCGAGGDQLGGYLQWLE 130

Query: 123 ERDINK----------IKDEDEDVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARS 172
           ERD+NK          ++D +E VNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARS
Sbjct: 131 ERDVNKKSNNNNNNNNVEDREEGVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARS 182

BLAST of Cla017533 vs. NCBI nr
Match: gi|778703677|ref|XP_011655408.1| (PREDICTED: uncharacterized protein LOC105435523 [Cucumis sativus])

HSP 1 Score: 153.3 bits (386), Expect = 3.8e-34
Identity = 96/193 (49.74%), Postives = 116/193 (60.10%), Query Frame = 1

Query: 3   SLNSSSLQVLPSPS--------SSSLRLVKFKAILQTLILS----LARAISRAKTTALHI 62
           ++  SS  +LPSP         SS+L  VKFK  + T+I S    LARAISRAK+T +HI
Sbjct: 5   AIGPSSPNILPSPQIFSIKSSHSSTLIFVKFKTFIHTIIFSQFCRLARAISRAKSTVVHI 64

Query: 63  LKQANYQSAIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAV--------LTWDHEY 122
           LK++ +       +NK K+ +GSFRLHYNWCS      SHV P            +DH  
Sbjct: 65  LKKSYHYK----DKNKNKIFFGSFRLHYNWCS------SHVMPVPDPIWELGHFYYDHAT 124

Query: 123 SGAGAGGDQLRGYLQWLEERDINK-----IKDEDEDVNEIDKLAEIFIARCHEKFKLEKQ 171
           S A A G QL GYLQWLEER +             ++NEIDKLAE+FIA CHEKF+LEKQ
Sbjct: 125 STA-ADGSQLSGYLQWLEERKLESETMTTATGTTAEMNEIDKLAEMFIASCHEKFRLEKQ 184

BLAST of Cla017533 vs. NCBI nr
Match: gi|659117803|ref|XP_008458796.1| (PREDICTED: uncharacterized protein LOC103498096 [Cucumis melo])

HSP 1 Score: 148.7 bits (374), Expect = 9.5e-33
Identity = 95/194 (48.97%), Postives = 115/194 (59.28%), Query Frame = 1

Query: 3   SLNSSSLQVLPSPS--------SSSLRLVKFKAILQTLILS----LARAISRAKTTALHI 62
           ++  SS ++LPS          SS+L  VKFK  + T+I S    LARAISRAK+T +HI
Sbjct: 4   AITPSSPKILPSAQIFSIKFSHSSTLIFVKFKTFIHTIIFSQFCRLARAISRAKSTVVHI 63

Query: 63  LKQANYQSAIALKRNKKKLLYGSFRLHYNWCSVSSNKYSHVTPAV--------LTWDHEY 122
           LK++ +       + K K+ +GSFRLHYNWCS      SHV P            +DH  
Sbjct: 64  LKKSYHYK----DKKKNKIFFGSFRLHYNWCS------SHVMPVPDPIWELGHFYYDHAT 123

Query: 123 SGAGAGGDQLRGYLQWLEERDINK------IKDEDEDVNEIDKLAEIFIARCHEKFKLEK 171
           S A A G QL GYLQWLEER +              +VNEIDKLAE+FIA CHEKF+LEK
Sbjct: 124 STA-ADGSQLSGYLQWLEERKLESETMTTTTTATTAEVNEIDKLAEMFIASCHEKFRLEK 183

BLAST of Cla017533 vs. NCBI nr
Match: gi|802750473|ref|XP_012087802.1| (PREDICTED: uncharacterized protein LOC105646548 [Jatropha curcas])

HSP 1 Score: 140.6 bits (353), Expect = 2.6e-30
Identity = 83/178 (46.63%), Postives = 109/178 (61.24%), Query Frame = 1

Query: 14  SPSSSSLRLVKFKAILQTLILS----LARAISRAKTTALHILKQANYQSAIALKRNKKK- 73
           SP SS+L  +K K ++ TLI+S    + RA+S+AKT    ILK+    + I   + +K+ 
Sbjct: 15  SPPSSTLSSMKIKTLIHTLIISHVSRMVRALSKAKTILAQILKENQPVNFILYPKKRKQK 74

Query: 74  ---LLYGSFRLHYNWCSVSSNKYSHVTPAVLTWDHEY-----------SGAGAGGDQLRG 133
              + +GSFRLHYNWC+ SS    HV P   T  H Y           S       QL G
Sbjct: 75  QRNIFFGSFRLHYNWCNTSS----HVLPVPTTEPHLYYDSTWNSIITTSDDLCNESQLSG 134

Query: 134 YLQWLEERDINK--IKDEDEDVNEIDKLAEIFIARCHEKFKLEKQESYRRFQDMMARS 171
           YLQWLE++ + K     + E+VNEID+LA++FIA CHEKF+LEKQESYRRFQ+MMARS
Sbjct: 135 YLQWLEDQKVIKENTDGDQENVNEIDQLADMFIATCHEKFRLEKQESYRRFQEMMARS 188

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LBV5_CUCSA4.5e-6678.89Uncharacterized protein OS=Cucumis sativus GN=Csa_3G809400 PE=4 SV=1[more]
A0A0A0KP26_CUCSA2.7e-3449.74Uncharacterized protein OS=Cucumis sativus GN=Csa_5G523130 PE=4 SV=1[more]
A0A067JKV5_JATCU1.8e-3046.63Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25527 PE=4 SV=1[more]
A0A0D2QHA8_GOSRA1.8e-3049.18Uncharacterized protein OS=Gossypium raimondii GN=B456_002G225600 PE=4 SV=1[more]
C6T4N8_SOYBN5.2e-3046.84Putative uncharacterized protein OS=Glycine max PE=2 SV=1[more]
Match NameE-valueIdentityDescription
gi|700204180|gb|KGN59313.1|6.5e-6678.89hypothetical protein Csa_3G809400 [Cucumis sativus][more]
gi|659085786|ref|XP_008443602.1|8.5e-6678.45PREDICTED: uncharacterized protein LOC103487158 [Cucumis melo][more]
gi|778703677|ref|XP_011655408.1|3.8e-3449.74PREDICTED: uncharacterized protein LOC105435523 [Cucumis sativus][more]
gi|659117803|ref|XP_008458796.1|9.5e-3348.97PREDICTED: uncharacterized protein LOC103498096 [Cucumis melo][more]
gi|802750473|ref|XP_012087802.1|2.6e-3046.63PREDICTED: uncharacterized protein LOC105646548 [Jatropha curcas][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008480DUF761_pln
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla017533Cla017533.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 135..169
score: 1.3
NoneNo IPR availablePANTHERPTHR33450FAMILY NOT NAMEDcoord: 3..171
score: 8.8
NoneNo IPR availablePANTHERPTHR33450:SF4SUBFAMILY NOT NAMEDcoord: 3..171
score: 8.8