Cp4.1LG02g05990 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG02g05990
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGlutaredoxin-like protein, putative
LocationCp4.1LG02 : 1372498 .. 1372905 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGGCCTACGACGCTGCTCCAACGACCTCCTCCTCCTCGACCTATCTCCGCCTTCCTCCGTCCCCTCCACCGCCTCCCTTTCCATCGACGTTGCCGAGTCCGCCGAGACACGAATCCGTCGCCTCATCTCCGAACATCCAGTCATCATCTTTAGCCGCACTTCTTGTTGCATGTGCCACGTCATGAAGAAGCTTCTCGCCTCCATCGGCGTTCACCCTACCGTCATCGAATTAGACGACCACGAGATCGACGCTCTCGCCTCCTTCTCCTCCACCACACCCGCAGCCACTCCTGCCGTTTTCATCGGTGGCTCCTATGTCGGCGGCCTTGAATCCCTCGTCGCACTCCACCTCAGCGGCCACCTCGTACCTAAGCTTGTCGAAGTCGGCGCTCTCTGGGTATGA

mRNA sequence

ATGCAAGGCCTACGACGCTGCTCCAACGACCTCCTCCTCCTCGACCTATCTCCGCCTTCCTCCGTCCCCTCCACCGCCTCCCTTTCCATCGACGTTGCCGAGTCCGCCGAGACACGAATCCGTCGCCTCATCTCCGAACATCCAGTCATCATCTTTAGCCGCACTTCTTGTTGCATGTGCCACGTCATGAAGAAGCTTCTCGCCTCCATCGGCGTTCACCCTACCGTCATCGAATTAGACGACCACGAGATCGACGCTCTCGCCTCCTTCTCCTCCACCACACCCGCAGCCACTCCTGCCGTTTTCATCGGTGGCTCCTATGTCGGCGGCCTTGAATCCCTCGTCGCACTCCACCTCAGCGGCCACCTCGTACCTAAGCTTGTCGAAGTCGGCGCTCTCTGGGTATGA

Coding sequence (CDS)

ATGCAAGGCCTACGACGCTGCTCCAACGACCTCCTCCTCCTCGACCTATCTCCGCCTTCCTCCGTCCCCTCCACCGCCTCCCTTTCCATCGACGTTGCCGAGTCCGCCGAGACACGAATCCGTCGCCTCATCTCCGAACATCCAGTCATCATCTTTAGCCGCACTTCTTGTTGCATGTGCCACGTCATGAAGAAGCTTCTCGCCTCCATCGGCGTTCACCCTACCGTCATCGAATTAGACGACCACGAGATCGACGCTCTCGCCTCCTTCTCCTCCACCACACCCGCAGCCACTCCTGCCGTTTTCATCGGTGGCTCCTATGTCGGCGGCCTTGAATCCCTCGTCGCACTCCACCTCAGCGGCCACCTCGTACCTAAGCTTGTCGAAGTCGGCGCTCTCTGGGTATGA

Protein sequence

MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCMCHVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAATPAVFIGGSYVGGLESLVALHLSGHLVPKLVEVGALWV
Homology
[Close]
BLAST of Cp4.1LG02g05990 vs. Swiss-Prot
Match: GRXC6_ARATH (Glutaredoxin-C6 OS=Arabidopsis thaliana GN=GRXC6 PE=2 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 1.8e-42
Identity = 96/140 (68.57%), Postives = 108/140 (77.14%), Query Frame = 1 

Query: 3   GLRRCSNDLLLLDLSPPSSVPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCMCHV 62
           GL+R SND++ LDL+PPS   ST SLSID  ES E +IRRLISEHPVIIFSR+SCCMCHV
Sbjct: 6   GLQRFSNDVVRLDLTPPSQTSST-SLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCHV 65

Query: 63  MKKLLASIGVHPTVIELDDHEIDALA-------SFSSTTPAATPAVFIGGSYVGGLESLV 122
           MK+LLA+IGV PTVIELDDHE+ +L        S   +     PAVFIG   VGGLESLV
Sbjct: 66  MKRLLATIGVIPTVIELDDHEVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESLV 125

Query: 123 ALHLSGHLVPKLVEVGALWV 136
           ALHLSG LVPKLV+VGALWV
Sbjct: 126 ALHLSGQLVPKLVQVGALWV 144

[Close]
BLAST of Cp4.1LG02g05990 vs. Swiss-Prot
Match: GRC10_ARATH (Glutaredoxin-C10 OS=Arabidopsis thaliana GN=GRXC10 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.3e-37
Identity = 89/150 (59.33%), Postives = 107/150 (71.33%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLS----PPSSVPSTA-----------SLSIDVAESAETRIRRLIS 60
           M+GLR CSND + LDL+    PP  +P  A           SLS D  E++E++I RLIS
Sbjct: 4   MRGLRNCSNDAVTLDLTVHPPPPPPLPPPAPSTVSSSTASTSLSFDEEETSESKIGRLIS 63

Query: 61  EHPVIIFSR-TSCCMCHVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAATPAVFIG 120
           EHPVIIF+R +SCCMCHVMKKLL+++GVHPTVIE+DD EI  LA        A P +FIG
Sbjct: 64  EHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEIDDGEIAYLA------VEAAPVLFIG 123

Query: 121 GSYVGGLESLVALHLSGHLVPKLVEVGALW 135
           G+ VGG ESLVALHLSG L+P+LVEVGALW
Sbjct: 124 GTCVGGFESLVALHLSGQLIPRLVEVGALW 147

[Close]
BLAST of Cp4.1LG02g05990 vs. Swiss-Prot
Match: GRXC7_ORYSJ (Glutaredoxin-C7 OS=Oryza sativa subsp. japonica GN=GRXC7 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 7.5e-25
Identity = 58/100 (58.00%), Postives = 74/100 (74.00%), Query Frame = 1 

Query: 34  ESAETRIRRLISEHPVIIFSRTSCCMCHVMKKLLASIGVHPTVIELDDHEIDALASFSST 93
           E    RI RL+ E PV+IF+R  CCMCHVM++LLA++G H TVIELD+   +A A  S+ 
Sbjct: 39  EQPAERIGRLVRESPVVIFARRGCCMCHVMRRLLAAVGAHATVIELDEAAEEAAA--SAA 98

Query: 94  TPAATPAVFIGGSYVGGLESLVALHLSGHLVPKLVEVGAL 134
             AA PA+F+GG+ VGGL+ L+ LHLSG LVP+L EVGAL
Sbjct: 99  AAAAVPALFVGGAPVGGLDGLMGLHLSGRLVPRLREVGAL 136

[Close]
BLAST of Cp4.1LG02g05990 vs. Swiss-Prot
Match: GRXC5_ORYSJ (Glutaredoxin-C5 OS=Oryza sativa subsp. japonica GN=GRXC5 PE=2 SV=2)

HSP 1 Score: 101.7 bits (252), Expect = 6.6e-21
Identity = 52/122 (42.62%), Postives = 72/122 (59.02%), Query Frame = 1 

Query: 22  VPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCMCHVMKKLLASIGVHPTVIELD- 81
           +P+ A +    AE+A  R+ RL SE  V++FS +SCCMCH +K+L   +GVHP V ELD 
Sbjct: 14  MPAAAMVVAAAAETAAERVERLASESAVVVFSVSSCCMCHAVKRLFCGMGVHPAVHELDL 73

Query: 82  -------DHEIDALASFSSTTPAATPAVFIGGSYVGGLESLVALHLSGHLVPKLVEVGAL 136
                  +  +  L        AA P VFIGG  VG ++ ++A H++G LVP L E GAL
Sbjct: 74  DPRGRDLERALARLVGAGGAAAAAVPVVFIGGKLVGAMDRVMAAHINGSLVPLLKEAGAL 133

[Close]
BLAST of Cp4.1LG02g05990 vs. Swiss-Prot
Match: GRXS2_ORYSJ (Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica GN=GRXS2 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.5e-20
Identity = 59/114 (51.75%), Postives = 76/114 (66.67%), Query Frame = 1 

Query: 27  SLSIDVA---ESAETRIRRLISEHPVIIFSRTSCCMCHVMKKLLASIGVHPTVIELD--- 86
           SL+ID A   E+   R+ RL+ E PV++F+R  C M HVM++LLA++G H TVIEL+   
Sbjct: 15  SLTIDPAGEEEAPAERVGRLVRESPVVVFARRGCYMAHVMRRLLAAVGAHATVIELEGGA 74

Query: 87  -DHEIDALASFSSTTPAATPAVFIGGSYVGGLESLVALHLSGHLVPKLVEVGAL 134
            + E  AL        AA PA+F+GG  VGGLE L+ LHLSG LVP+L EVGAL
Sbjct: 75  AEEEEAALGG-----GAALPALFVGGDPVGGLEGLMGLHLSGRLVPRLREVGAL 123

[Close]
BLAST of Cp4.1LG02g05990 vs. TrEMBL
Match: A0A0A0L5B1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G646150 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 8.8e-57
Identity = 121/136 (88.97%), Postives = 128/136 (94.12%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLSPP-SSVPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCM 60
           MQGLRRCSNDLL LDLSPP S+ PS ASLSIDVAESA+TRIRRLISEHPVIIFSRTSCCM
Sbjct: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAATPAVFIGGSYVGGLESLVALHL 120
           CHVMKKLLA+IGVHPTVIEL+D EI ALASFSSTT  ATPAVFIGG+++GGLESLVALHL
Sbjct: 61  CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTT-TATPAVFIGGAFLGGLESLVALHL 120

Query: 121 SGHLVPKLVEVGALWV 136
           SGHLVPKLVEVGALWV
Sbjct: 121 SGHLVPKLVEVGALWV 135

[Close]
BLAST of Cp4.1LG02g05990 vs. TrEMBL
Match: I1SSK1_HEVBR (Glutaredoxin 2.1 OS=Hevea brasiliensis GN=Grx2.1 PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 4.9e-47
Identity = 107/147 (72.79%), Postives = 117/147 (79.59%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLSPPSSVP------STASLSIDVAESAETRIRRLISEHPVIIFSR 60
           MQGLRRCSND + LDL+PPS  P      S+ SLS D  ESAETRI+RLISEHPVIIFSR
Sbjct: 1   MQGLRRCSNDAVHLDLTPPSPPPPPPPPTSSTSLSFDAVESAETRIQRLISEHPVIIFSR 60

Query: 61  TSCCMCHVMKKLLASIGVHPTVIELDDHEIDAL-----ASFSSTTPA-ATPAVFIGGSYV 120
           +SCCMCHVMKKLLA+IGVHPTVIELDDHEI AL     +  +   P    PA+FIGG+ V
Sbjct: 61  SSCCMCHVMKKLLATIGVHPTVIELDDHEISALPLPPPSQDNDDAPRNLAPALFIGGTCV 120

Query: 121 GGLESLVALHLSGHLVPKLVEVGALWV 136
           GGLESLVALHLSGHLVPKLVEVGALWV
Sbjct: 121 GGLESLVALHLSGHLVPKLVEVGALWV 147

[Close]
BLAST of Cp4.1LG02g05990 vs. TrEMBL
Match: I1SSK0_HEVBR (Glutaredoxin 2 OS=Hevea brasiliensis GN=Grx2 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 8.3e-47
Identity = 107/148 (72.30%), Postives = 117/148 (79.05%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLSPPSSVP-------STASLSIDVAESAETRIRRLISEHPVIIFS 60
           MQGLRRCSND + LDL+PPS  P       S+ SLS D  ESAETRI+RLISEHPVIIFS
Sbjct: 1   MQGLRRCSNDAVHLDLTPPSPPPPPPPPPTSSTSLSFDAVESAETRIQRLISEHPVIIFS 60

Query: 61  RTSCCMCHVMKKLLASIGVHPTVIELDDHEIDAL-----ASFSSTTPA-ATPAVFIGGSY 120
           R+SCCMCHVMKKLLA+IGVHPTVIELDDHEI AL     +  +   P    PA+FIGG+ 
Sbjct: 61  RSSCCMCHVMKKLLATIGVHPTVIELDDHEISALPLPPPSHDNDDAPRNLAPALFIGGTC 120

Query: 121 VGGLESLVALHLSGHLVPKLVEVGALWV 136
           VGGLESLVALHLSGHLVPKLVEVGALWV
Sbjct: 121 VGGLESLVALHLSGHLVPKLVEVGALWV 148

[Close]
BLAST of Cp4.1LG02g05990 vs. TrEMBL
Match: A0A067KP67_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07656 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 7.0e-46
Identity = 107/156 (68.59%), Postives = 120/156 (76.92%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLSPP----------------SSVPSTASLSIDVAESAETRIRRLI 60
           MQGLRRCSND++  DL+PP                SS  S++SLSID AESAETRI+RLI
Sbjct: 1   MQGLRRCSNDVVRFDLTPPPPPPTSTATNSSSASSSSSSSSSSLSIDAAESAETRIQRLI 60

Query: 61  SEHPVIIFSRTSCCMCHVMKKLLASIGVHPTVIELDDHEIDAL----ASFSSTTPA-ATP 120
           SEHPVIIFSR+SCCMCHVMKKLLA++GVHPTVIELDD+EI AL     S  S +P    P
Sbjct: 61  SEHPVIIFSRSSCCMCHVMKKLLATVGVHPTVIELDDNEISALPPPPPSHDSDSPRNLVP 120

Query: 121 AVFIGGSYVGGLESLVALHLSGHLVPKLVEVGALWV 136
           A+FIGG+ VGGLESLVALHLS HLVPKLVEVGALWV
Sbjct: 121 ALFIGGTCVGGLESLVALHLSNHLVPKLVEVGALWV 156

[Close]
BLAST of Cp4.1LG02g05990 vs. TrEMBL
Match: A0A0L9V1W0_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g256100 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.7e-45
Identity = 102/142 (71.83%), Postives = 116/142 (81.69%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLSPP-------SSVPSTASLSIDVAESAETRIRRLISEHPVIIFS 60
           MQGLRRCSND++ LDL+ P       S+  S++SLSIDV ES E RI+RLISEHPVIIF+
Sbjct: 1   MQGLRRCSNDVVHLDLTTPTPATTNSSTTSSSSSLSIDVEESTEARIQRLISEHPVIIFT 60

Query: 61  RTSCCMCHVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAATPAVFIGGSYVGGLES 120
           R+SCCMCHVMKKLLA+IGV+PTVIELDDHEI AL          TPAVFIGG+ VGGLES
Sbjct: 61  RSSCCMCHVMKKLLATIGVNPTVIELDDHEIAALPD-----ATRTPAVFIGGASVGGLES 120

Query: 121 LVALHLSGHLVPKLVEVGALWV 136
           LVALH+SGHLVPKLV+VGALWV
Sbjct: 121 LVALHVSGHLVPKLVQVGALWV 137

[Close]
BLAST of Cp4.1LG02g05990 vs. TAIR10
Match: AT4G33040.1 (AT4G33040.1 Thioredoxin superfamily protein)

HSP 1 Score: 173.3 bits (438), Expect = 1.0e-43
Identity = 96/140 (68.57%), Postives = 108/140 (77.14%), Query Frame = 1 

Query: 3   GLRRCSNDLLLLDLSPPSSVPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCMCHV 62
           GL+R SND++ LDL+PPS   ST SLSID  ES E +IRRLISEHPVIIFSR+SCCMCHV
Sbjct: 6   GLQRFSNDVVRLDLTPPSQTSST-SLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCHV 65

Query: 63  MKKLLASIGVHPTVIELDDHEIDALA-------SFSSTTPAATPAVFIGGSYVGGLESLV 122
           MK+LLA+IGV PTVIELDDHE+ +L        S   +     PAVFIG   VGGLESLV
Sbjct: 66  MKRLLATIGVIPTVIELDDHEVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESLV 125

Query: 123 ALHLSGHLVPKLVEVGALWV 136
           ALHLSG LVPKLV+VGALWV
Sbjct: 126 ALHLSGQLVPKLVQVGALWV 144

[Close]
BLAST of Cp4.1LG02g05990 vs. TAIR10
Match: AT5G11930.1 (AT5G11930.1 Thioredoxin superfamily protein)

HSP 1 Score: 157.1 bits (396), Expect = 7.4e-39
Identity = 89/150 (59.33%), Postives = 107/150 (71.33%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLS----PPSSVPSTA-----------SLSIDVAESAETRIRRLIS 60
           M+GLR CSND + LDL+    PP  +P  A           SLS D  E++E++I RLIS
Sbjct: 4   MRGLRNCSNDAVTLDLTVHPPPPPPLPPPAPSTVSSSTASTSLSFDEEETSESKIGRLIS 63

Query: 61  EHPVIIFSR-TSCCMCHVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAATPAVFIG 120
           EHPVIIF+R +SCCMCHVMKKLL+++GVHPTVIE+DD EI  LA        A P +FIG
Sbjct: 64  EHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEIDDGEIAYLA------VEAAPVLFIG 123

Query: 121 GSYVGGLESLVALHLSGHLVPKLVEVGALW 135
           G+ VGG ESLVALHLSG L+P+LVEVGALW
Sbjct: 124 GTCVGGFESLVALHLSGQLIPRLVEVGALW 147

[Close]
BLAST of Cp4.1LG02g05990 vs. TAIR10
Match: AT1G28480.1 (AT1G28480.1 Thioredoxin superfamily protein)

HSP 1 Score: 92.0 bits (227), Expect = 2.9e-19
Identity = 52/142 (36.62%), Postives = 80/142 (56.34%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60
           MQG   C+ +  +      S  P    LS+    + E R+R ++ E+ VI+  R  CCMC
Sbjct: 1   MQGTISCARNYNMTTTVGESLRP----LSLKTQGNGE-RVRMVVEENAVIVIGRRGCCMC 60

Query: 61  HVMKKLLASIGVHPTVIELDDH-------EIDALASFSSTTPAATPAVFIGGSYVGGLES 120
           HV+++LL  +GV+P V+E+D+        E++ +           PAV++GG   GGL+ 
Sbjct: 61  HVVRRLLLGLGVNPAVLEIDEEREDEVLSELENIGVQGGGGTVKLPAVYVGGRLFGGLDR 120

Query: 121 LVALHLSGHLVPKLVEVGALWV 136
           ++A H+SG LVP L EVGALW+
Sbjct: 121 VMATHISGELVPILKEVGALWL 137

[Close]
BLAST of Cp4.1LG02g05990 vs. TAIR10
Match: AT3G02000.1 (AT3G02000.1 Thioredoxin superfamily protein)

HSP 1 Score: 90.9 bits (224), Expect = 6.5e-19
Identity = 49/113 (43.36%), Postives = 67/113 (59.29%), Query Frame = 1 

Query: 32  VAESAETRIRRLISEHPVIIFSRTSCCMCHVMKKLLASIGVHPTVIELDDHE-------- 91
           VA++   RI  L SE  V+IFS ++CCMCH +K L   +GV P V ELD H         
Sbjct: 24  VADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLFRGMGVSPAVHELDLHPYGGDIQRA 83

Query: 92  -IDALASFSSTTPAATPAVFIGGSYVGGLESLVALHLSGHLVPKLVEVGALWV 136
            I  L    S++P + P VFIGG  VG ++ ++A H++G LVP L + GALW+
Sbjct: 84  LIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASHINGSLVPLLKDAGALWL 136

[Close]
BLAST of Cp4.1LG02g05990 vs. TAIR10
Match: AT5G18600.1 (AT5G18600.1 Thioredoxin superfamily protein)

HSP 1 Score: 88.6 bits (218), Expect = 3.2e-18
Identity = 45/100 (45.00%), Postives = 62/100 (62.00%), Query Frame = 1 

Query: 40  IRRLISEHPVIIFSRTSCCMCHVMKKLLASIGVHPTVIELDD----HEIDALASFSSTTP 99
           I +++ E PV+I+S++SCCM H +K LL   G +P V ELD+     EI+        +P
Sbjct: 4   ITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLGCSP 63

Query: 100 AATPAVFIGGSYVGGLESLVALHLSGHLVPKLVEVGALWV 136
            A P VFIGG  VGG   +++LHL+G L+P L   GALWV
Sbjct: 64  -AVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]
BLAST of Cp4.1LG02g05990 vs. NCBI nr
Match: gi|449447128|ref|XP_004141321.1| (PREDICTED: glutaredoxin-C6 [Cucumis sativus])

HSP 1 Score: 227.6 bits (579), Expect = 1.3e-56
Identity = 121/136 (88.97%), Postives = 128/136 (94.12%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLSPP-SSVPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCM 60
           MQGLRRCSNDLL LDLSPP S+ PS ASLSIDVAESA+TRIRRLISEHPVIIFSRTSCCM
Sbjct: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAATPAVFIGGSYVGGLESLVALHL 120
           CHVMKKLLA+IGVHPTVIEL+D EI ALASFSSTT  ATPAVFIGG+++GGLESLVALHL
Sbjct: 61  CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTT-TATPAVFIGGAFLGGLESLVALHL 120

Query: 121 SGHLVPKLVEVGALWV 136
           SGHLVPKLVEVGALWV
Sbjct: 121 SGHLVPKLVEVGALWV 135

[Close]
BLAST of Cp4.1LG02g05990 vs. NCBI nr
Match: gi|1009134593|ref|XP_015884532.1| (PREDICTED: glutaredoxin-C6-like [Ziziphus jujuba])

HSP 1 Score: 203.4 bits (516), Expect = 2.6e-49
Identity = 112/142 (78.87%), Postives = 121/142 (85.21%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLSP-PSSVPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCM 60
           MQGLRRCSND++ +DL P P++  + +SLSIDVAESAETRIRRLISEHPVIIFSR SCCM
Sbjct: 1   MQGLRRCSNDVVHVDLPPAPAATTTASSLSIDVAESAETRIRRLISEHPVIIFSRNSCCM 60

Query: 61  CHVMKKLLASIGVHPTVIELDDHEIDALASFS-----STTPA-ATPAVFIGGSYVGGLES 120
           CHVMKKLLA+IGVHPTVIELDDHEI AL S S     S  P  + PAVFIGGS VGGLES
Sbjct: 61  CHVMKKLLATIGVHPTVIELDDHEIAALPSCSPAHDNSDHPRHSAPAVFIGGSCVGGLES 120

Query: 121 LVALHLSGHLVPKLVEVGALWV 136
           LVALHLSGHLVPKLVEVGALWV
Sbjct: 121 LVALHLSGHLVPKLVEVGALWV 142

[Close]
BLAST of Cp4.1LG02g05990 vs. NCBI nr
Match: gi|470109536|ref|XP_004291050.1| (PREDICTED: glutaredoxin-C6 [Fragaria vesca subsp. vesca])

HSP 1 Score: 195.7 bits (496), Expect = 5.3e-47
Identity = 106/139 (76.26%), Postives = 116/139 (83.45%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60
           MQGLRRCSND++ L LSP    P+ +SLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC
Sbjct: 1   MQGLRRCSNDVVHLGLSPSPPPPNPSSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60

Query: 61  HVMKKLLASIGVHPTVIELDDHEIDALASFSSTTP------AATPAVFIGGSYVGGLESL 120
           HVMKKLLA+IGVHPTVIELDDHEI AL S   ++          P+VFIGGS VGGLESL
Sbjct: 61  HVMKKLLATIGVHPTVIELDDHEIAALPSPPPSSDDDHPRNNIPPSVFIGGSCVGGLESL 120

Query: 121 VALHLSGHLVPKLVEVGAL 134
           VALHL+GHLVPKL+EVGAL
Sbjct: 121 VALHLTGHLVPKLLEVGAL 139

[Close]
BLAST of Cp4.1LG02g05990 vs. NCBI nr
Match: gi|329750629|gb|AEC03330.1| (glutaredoxin 2.1 [Hevea brasiliensis])

HSP 1 Score: 195.3 bits (495), Expect = 7.0e-47
Identity = 107/147 (72.79%), Postives = 117/147 (79.59%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLSPPSSVP------STASLSIDVAESAETRIRRLISEHPVIIFSR 60
           MQGLRRCSND + LDL+PPS  P      S+ SLS D  ESAETRI+RLISEHPVIIFSR
Sbjct: 1   MQGLRRCSNDAVHLDLTPPSPPPPPPPPTSSTSLSFDAVESAETRIQRLISEHPVIIFSR 60

Query: 61  TSCCMCHVMKKLLASIGVHPTVIELDDHEIDAL-----ASFSSTTPA-ATPAVFIGGSYV 120
           +SCCMCHVMKKLLA+IGVHPTVIELDDHEI AL     +  +   P    PA+FIGG+ V
Sbjct: 61  SSCCMCHVMKKLLATIGVHPTVIELDDHEISALPLPPPSQDNDDAPRNLAPALFIGGTCV 120

Query: 121 GGLESLVALHLSGHLVPKLVEVGALWV 136
           GGLESLVALHLSGHLVPKLVEVGALWV
Sbjct: 121 GGLESLVALHLSGHLVPKLVEVGALWV 147

[Close]
BLAST of Cp4.1LG02g05990 vs. NCBI nr
Match: gi|329750627|gb|AEC03329.1| (glutaredoxin 2 [Hevea brasiliensis])

HSP 1 Score: 194.5 bits (493), Expect = 1.2e-46
Identity = 107/148 (72.30%), Postives = 117/148 (79.05%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLSPPSSVP-------STASLSIDVAESAETRIRRLISEHPVIIFS 60
           MQGLRRCSND + LDL+PPS  P       S+ SLS D  ESAETRI+RLISEHPVIIFS
Sbjct: 1   MQGLRRCSNDAVHLDLTPPSPPPPPPPPPTSSTSLSFDAVESAETRIQRLISEHPVIIFS 60

Query: 61  RTSCCMCHVMKKLLASIGVHPTVIELDDHEIDAL-----ASFSSTTPA-ATPAVFIGGSY 120
           R+SCCMCHVMKKLLA+IGVHPTVIELDDHEI AL     +  +   P    PA+FIGG+ 
Sbjct: 61  RSSCCMCHVMKKLLATIGVHPTVIELDDHEISALPLPPPSHDNDDAPRNLAPALFIGGTC 120

Query: 121 VGGLESLVALHLSGHLVPKLVEVGALWV 136
           VGGLESLVALHLSGHLVPKLVEVGALWV
Sbjct: 121 VGGLESLVALHLSGHLVPKLVEVGALWV 148

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g05990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GRXC6_ARATH1.8e-4268.57Glutaredoxin-C6 OS=Arabidopsis thaliana GN=GRXC6 PE=2 SV=2[more]
GRC10_ARATH1.3e-3759.33Glutaredoxin-C10 OS=Arabidopsis thaliana GN=GRXC10 PE=2 SV=1[more]
GRXC7_ORYSJ7.5e-2558.00Glutaredoxin-C7 OS=Oryza sativa subsp. japonica GN=GRXC7 PE=3 SV=1[more]
GRXC5_ORYSJ6.6e-2142.62Glutaredoxin-C5 OS=Oryza sativa subsp. japonica GN=GRXC5 PE=2 SV=2[more]
GRXS2_ORYSJ1.5e-2051.75Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica GN=GRXS2 PE=2 SV=1[more]
BLAST of Cp4.1LG02g05990 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5B1_CUCSA8.8e-5788.97Uncharacterized protein OS=Cucumis sativus GN=Csa_4G646150 PE=4 SV=1[more]
I1SSK1_HEVBR4.9e-4772.79Glutaredoxin 2.1 OS=Hevea brasiliensis GN=Grx2.1 PE=2 SV=1[more]
I1SSK0_HEVBR8.3e-4772.30Glutaredoxin 2 OS=Hevea brasiliensis GN=Grx2 PE=2 SV=1[more]
A0A067KP67_JATCU7.0e-4668.59Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07656 PE=4 SV=1[more]
A0A0L9V1W0_PHAAN2.7e-4571.83Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g256100 PE=4 SV=1[more]
BLAST of Cp4.1LG02g05990 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G33040.11.0e-4368.57 Thioredoxin superfamily protein[more]
AT5G11930.17.4e-3959.33 Thioredoxin superfamily protein[more]
AT1G28480.12.9e-1936.62 Thioredoxin superfamily protein[more]
AT3G02000.16.5e-1943.36 Thioredoxin superfamily protein[more]
AT5G18600.13.2e-1845.00 Thioredoxin superfamily protein[more]
BLAST of Cp4.1LG02g05990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449447128|ref|XP_004141321.1|1.3e-5688.97PREDICTED: glutaredoxin-C6 [Cucumis sativus][more]
gi|1009134593|ref|XP_015884532.1|2.6e-4978.87PREDICTED: glutaredoxin-C6-like [Ziziphus jujuba][more]
gi|470109536|ref|XP_004291050.1|5.3e-4776.26PREDICTED: glutaredoxin-C6 [Fragaria vesca subsp. vesca][more]
gi|329750629|gb|AEC03330.1|7.0e-4772.79glutaredoxin 2.1 [Hevea brasiliensis][more]
gi|329750627|gb|AEC03329.1|1.2e-4672.30glutaredoxin 2 [Hevea brasiliensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO:0009055electron carrier activity
Vocabulary: INTERPRO
TermDefinition
IPR014025Glutaredoxin_subgr
IPR012336Thioredoxin-like_fold
IPR011905GlrX-like_pln_2
IPR002109Glutaredoxin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0008152 metabolic process
biological_process GO:0022900 electron transport chain
cellular_component GO:0005623 cell
cellular_component GO:0005777 peroxisome
cellular_component GO:0005575 cellular_component
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0016787 hydrolase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g05990.1Cp4.1LG02g05990.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 49..108
score: 3.8
IPR002109GlutaredoxinPROFILEPS51354GLUTAREDOXIN_2coord: 37..134
score: 21
IPR011905Glutaredoxin-like, plant IITIGRFAMsTIGR02189TIGR02189coord: 40..135
score: 4.7
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 32..135
score: 1.9
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 36..134
score: 1.27
IPR014025Glutaredoxin subgroupPRINTSPR00160GLUTAREDOXINcoord: 105..118
score: 1.6E-6coord: 49..67
score: 1.6E-6coord: 91..104
score: 1.
NoneNo IPR availablePANTHERPTHR10168GLUTAREDOXINcoord: 5..135
score: 4.1
NoneNo IPR availablePANTHERPTHR10168:SF56GLUTAREDOXIN-C10-RELATEDcoord: 5..135
score: 4.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG02g05990Cucsa.299470Cucumber (Gy14) v1cgycpeB0783
Cp4.1LG02g05990Cucsa.395070Cucumber (Gy14) v1cgycpeB1043
Cp4.1LG02g05990CmaCh01G017310Cucurbita maxima (Rimu)cmacpeB490
Cp4.1LG02g05990CmaCh05G000900Cucurbita maxima (Rimu)cmacpeB780
Cp4.1LG02g05990CmaCh09G003400Cucurbita maxima (Rimu)cmacpeB045
Cp4.1LG02g05990CmoCh09G003400Cucurbita moschata (Rifu)cmocpeB020
Cp4.1LG02g05990CmoCh05G000980Cucurbita moschata (Rifu)cmocpeB734
Cp4.1LG02g05990CmoCh01G017820Cucurbita moschata (Rifu)cmocpeB445
Cp4.1LG02g05990Cla022682Watermelon (97103) v1cpewmB541
Cp4.1LG02g05990Cla020871Watermelon (97103) v1cpewmB561
Cp4.1LG02g05990Csa2G351650Cucumber (Chinese Long) v2cpecuB539
Cp4.1LG02g05990Csa4G646150Cucumber (Chinese Long) v2cpecuB564
Cp4.1LG02g05990MELO3C010749Melon (DHL92) v3.5.1cpemeB508
Cp4.1LG02g05990MELO3C016878Melon (DHL92) v3.5.1cpemeB538
Cp4.1LG02g05990ClCG05G017930Watermelon (Charleston Gray)cpewcgB511
Cp4.1LG02g05990ClCG08G017070Watermelon (Charleston Gray)cpewcgB528
Cp4.1LG02g05990CSPI04G25380Wild cucumber (PI 183967)cpecpiB566
Cp4.1LG02g05990CSPI02G17920Wild cucumber (PI 183967)cpecpiB541
Cp4.1LG02g05990Lsi04G014200Bottle gourd (USVL1VR-Ls)cpelsiB462
Cp4.1LG02g05990Lsi08G015880Bottle gourd (USVL1VR-Ls)cpelsiB477
Cp4.1LG02g05990MELO3C016878.2Melon (DHL92) v3.6.1cpemedB638
Cp4.1LG02g05990MELO3C010749.2Melon (DHL92) v3.6.1cpemedB605
Cp4.1LG02g05990CsaV3_2G025520Cucumber (Chinese Long) v3cpecucB0675
Cp4.1LG02g05990CsaV3_4G035710Cucumber (Chinese Long) v3cpecucB0701
Cp4.1LG02g05990Bhi09G002575Wax gourdcpewgoB0725
Cp4.1LG02g05990Bhi04G000461Wax gourdcpewgoB0684
Cp4.1LG02g05990CsGy4G023680Cucumber (Gy14) v2cgybcpeB539
Cp4.1LG02g05990CsGy2G017870Cucumber (Gy14) v2cgybcpeB224
Cp4.1LG02g05990Carg10694Silver-seed gourdcarcpeB1082
Cp4.1LG02g05990Carg11929Silver-seed gourdcarcpeB0265
Cp4.1LG02g05990Carg21732Silver-seed gourdcarcpeB0447
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG02g05990Cp4.1LG11g00260Cucurbita pepo (Zucchini)cpecpeB125
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG02g05990Cucurbita moschata (Rifu)cmocpeB060
Cp4.1LG02g05990Cucumber (Gy14) v2cgybcpeB097
Cp4.1LG02g05990Cucumber (Gy14) v2cgybcpeB956
Cp4.1LG02g05990Melon (DHL92) v3.6.1cpemedB599
Cp4.1LG02g05990Silver-seed gourdcarcpeB0139
Cp4.1LG02g05990Silver-seed gourdcarcpeB1237
Cp4.1LG02g05990Cucumber (Chinese Long) v3cpecucB0663
Cp4.1LG02g05990Cucumber (Chinese Long) v3cpecucB0737
Cp4.1LG02g05990Wax gourdcpewgoB0735
Cp4.1LG02g05990Wax gourdcpewgoB0741
Cp4.1LG02g05990Cucurbita pepo (Zucchini)cpecpeB354
Cp4.1LG02g05990Cucurbita pepo (Zucchini)cpecpeB459