CmoCh01G017820 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh01G017820
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionGlutaredoxin 2.1
LocationCmo_Chr01 : 13162993 .. 13163400 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGGCCTACGACGCTGCTCCAACGACCTCCTCCTCCTCGACCTATCTCCGCCATCCTCCGTCCCCTCCACCGCCTCCCTTTCCATCGACGTTGCCGAGTCCGCCGAGACACGAATCCGTCGCCTCATCTCCGAACATCCAGTCATCATCTTTAGCCGCACTTCTTGTTGCATGTGCCACGTCATGAAGAAGCTTCTCGCCTCTATCGGCGTTCACCCTACCGTCATCGAATTAGACGACCACGAGATCGACGCTCTCGCCTCCTTCTCCTCCACCACCCCCGCAGCCGCTCCTGCCGTCTTCATGGGTGGCTCCTACGTCGGCGGCCTTGAATCCCTCGTCGCACTCCACCTCAGCGGCCACCTCGTACCTAAGCTTGTCGAGGTCGGCGCTCTCTGGGTATGA

mRNA sequence

ATGCAAGGCCTACGACGCTGCTCCAACGACCTCCTCCTCCTCGACCTATCTCCGCCATCCTCCGTCCCCTCCACCGCCTCCCTTTCCATCGACGTTGCCGAGTCCGCCGAGACACGAATCCGTCGCCTCATCTCCGAACATCCAGTCATCATCTTTAGCCGCACTTCTTGTTGCATGTGCCACGTCATGAAGAAGCTTCTCGCCTCTATCGGCGTTCACCCTACCGTCATCGAATTAGACGACCACGAGATCGACGCTCTCGCCTCCTTCTCCTCCACCACCCCCGCAGCCGCTCCTGCCGTCTTCATGGGTGGCTCCTACGTCGGCGGCCTTGAATCCCTCGTCGCACTCCACCTCAGCGGCCACCTCGTACCTAAGCTTGTCGAGGTCGGCGCTCTCTGGGTATGA

Coding sequence (CDS)

ATGCAAGGCCTACGACGCTGCTCCAACGACCTCCTCCTCCTCGACCTATCTCCGCCATCCTCCGTCCCCTCCACCGCCTCCCTTTCCATCGACGTTGCCGAGTCCGCCGAGACACGAATCCGTCGCCTCATCTCCGAACATCCAGTCATCATCTTTAGCCGCACTTCTTGTTGCATGTGCCACGTCATGAAGAAGCTTCTCGCCTCTATCGGCGTTCACCCTACCGTCATCGAATTAGACGACCACGAGATCGACGCTCTCGCCTCCTTCTCCTCCACCACCCCCGCAGCCGCTCCTGCCGTCTTCATGGGTGGCTCCTACGTCGGCGGCCTTGAATCCCTCGTCGCACTCCACCTCAGCGGCCACCTCGTACCTAAGCTTGTCGAGGTCGGCGCTCTCTGGGTATGA
Homology
[Close]
BLAST of CmoCh01G017820 vs. Swiss-Prot
Match: GRXC6_ARATH (Glutaredoxin-C6 OS=Arabidopsis thaliana GN=GRXC6 PE=2 SV=2)

HSP 1 Score: 171.8 bits (434), Expect = 5.2e-42
Identity = 95/140 (67.86%), Postives = 108/140 (77.14%), Query Frame = 1 

Query: 3   GLRRCSNDLLLLDLSPPSSVPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCMCHV 62
           GL+R SND++ LDL+PPS   ST SLSID  ES E +IRRLISEHPVIIFSR+SCCMCHV
Sbjct: 6   GLQRFSNDVVRLDLTPPSQTSST-SLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCHV 65

Query: 63  MKKLLASIGVHPTVIELDDHEIDALA-------SFSSTTPAAAPAVFMGGSYVGGLESLV 122
           MK+LLA+IGV PTVIELDDHE+ +L        S   +     PAVF+G   VGGLESLV
Sbjct: 66  MKRLLATIGVIPTVIELDDHEVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESLV 125

Query: 123 ALHLSGHLVPKLVEVGALWV 136
           ALHLSG LVPKLV+VGALWV
Sbjct: 126 ALHLSGQLVPKLVQVGALWV 144

[Close]
BLAST of CmoCh01G017820 vs. Swiss-Prot
Match: GRC10_ARATH (Glutaredoxin-C10 OS=Arabidopsis thaliana GN=GRXC10 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.3e-37
Identity = 89/150 (59.33%), Postives = 108/150 (72.00%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLS----PPSSVPSTA-----------SLSIDVAESAETRIRRLIS 60
           M+GLR CSND + LDL+    PP  +P  A           SLS D  E++E++I RLIS
Sbjct: 4   MRGLRNCSNDAVTLDLTVHPPPPPPLPPPAPSTVSSSTASTSLSFDEEETSESKIGRLIS 63

Query: 61  EHPVIIFSR-TSCCMCHVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFMG 120
           EHPVIIF+R +SCCMCHVMKKLL+++GVHPTVIE+DD EI  LA        AAP +F+G
Sbjct: 64  EHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEIDDGEIAYLA------VEAAPVLFIG 123

Query: 121 GSYVGGLESLVALHLSGHLVPKLVEVGALW 135
           G+ VGG ESLVALHLSG L+P+LVEVGALW
Sbjct: 124 GTCVGGFESLVALHLSGQLIPRLVEVGALW 147

[Close]
BLAST of CmoCh01G017820 vs. Swiss-Prot
Match: GRXC7_ORYSJ (Glutaredoxin-C7 OS=Oryza sativa subsp. japonica GN=GRXC7 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.7e-24
Identity = 58/100 (58.00%), Postives = 74/100 (74.00%), Query Frame = 1 

Query: 34  ESAETRIRRLISEHPVIIFSRTSCCMCHVMKKLLASIGVHPTVIELDDHEIDALASFSST 93
           E    RI RL+ E PV+IF+R  CCMCHVM++LLA++G H TVIELD+   +A A  S+ 
Sbjct: 39  EQPAERIGRLVRESPVVIFARRGCCMCHVMRRLLAAVGAHATVIELDEAAEEAAA--SAA 98

Query: 94  TPAAAPAVFMGGSYVGGLESLVALHLSGHLVPKLVEVGAL 134
             AA PA+F+GG+ VGGL+ L+ LHLSG LVP+L EVGAL
Sbjct: 99  AAAAVPALFVGGAPVGGLDGLMGLHLSGRLVPRLREVGAL 136

[Close]
BLAST of CmoCh01G017820 vs. Swiss-Prot
Match: GRXC5_ORYSJ (Glutaredoxin-C5 OS=Oryza sativa subsp. japonica GN=GRXC5 PE=2 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 1.5e-20
Identity = 51/122 (41.80%), Postives = 72/122 (59.02%), Query Frame = 1 

Query: 22  VPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCMCHVMKKLLASIGVHPTVIELD- 81
           +P+ A +    AE+A  R+ RL SE  V++FS +SCCMCH +K+L   +GVHP V ELD 
Sbjct: 14  MPAAAMVVAAAAETAAERVERLASESAVVVFSVSSCCMCHAVKRLFCGMGVHPAVHELDL 73

Query: 82  -------DHEIDALASFSSTTPAAAPAVFMGGSYVGGLESLVALHLSGHLVPKLVEVGAL 136
                  +  +  L        AA P VF+GG  VG ++ ++A H++G LVP L E GAL
Sbjct: 74  DPRGRDLERALARLVGAGGAAAAAVPVVFIGGKLVGAMDRVMAAHINGSLVPLLKEAGAL 133

[Close]
BLAST of CmoCh01G017820 vs. Swiss-Prot
Match: GRXS2_ORYSJ (Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica GN=GRXS2 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.3e-20
Identity = 59/114 (51.75%), Postives = 76/114 (66.67%), Query Frame = 1 

Query: 27  SLSIDVA---ESAETRIRRLISEHPVIIFSRTSCCMCHVMKKLLASIGVHPTVIELD--- 86
           SL+ID A   E+   R+ RL+ E PV++F+R  C M HVM++LLA++G H TVIEL+   
Sbjct: 15  SLTIDPAGEEEAPAERVGRLVRESPVVVFARRGCYMAHVMRRLLAAVGAHATVIELEGGA 74

Query: 87  -DHEIDALASFSSTTPAAAPAVFMGGSYVGGLESLVALHLSGHLVPKLVEVGAL 134
            + E  AL        AA PA+F+GG  VGGLE L+ LHLSG LVP+L EVGAL
Sbjct: 75  AEEEEAALGG-----GAALPALFVGGDPVGGLEGLMGLHLSGRLVPRLREVGAL 123

[Close]
BLAST of CmoCh01G017820 vs. TrEMBL
Match: A0A0A0L5B1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G646150 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 7.5e-56
Identity = 119/136 (87.50%), Postives = 127/136 (93.38%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLSPP-SSVPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCM 60
           MQGLRRCSNDLL LDLSPP S+ PS ASLSIDVAESA+TRIRRLISEHPVIIFSRTSCCM
Sbjct: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFMGGSYVGGLESLVALHL 120
           CHVMKKLLA+IGVHPTVIEL+D EI ALASFSSTT  A PAVF+GG+++GGLESLVALHL
Sbjct: 61  CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTT-TATPAVFIGGAFLGGLESLVALHL 120

Query: 121 SGHLVPKLVEVGALWV 136
           SGHLVPKLVEVGALWV
Sbjct: 121 SGHLVPKLVEVGALWV 135

[Close]
BLAST of CmoCh01G017820 vs. TrEMBL
Match: I1SSK1_HEVBR (Glutaredoxin 2.1 OS=Hevea brasiliensis GN=Grx2.1 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.7e-47
Identity = 107/147 (72.79%), Postives = 118/147 (80.27%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLSPPSSVP------STASLSIDVAESAETRIRRLISEHPVIIFSR 60
           MQGLRRCSND + LDL+PPS  P      S+ SLS D  ESAETRI+RLISEHPVIIFSR
Sbjct: 1   MQGLRRCSNDAVHLDLTPPSPPPPPPPPTSSTSLSFDAVESAETRIQRLISEHPVIIFSR 60

Query: 61  TSCCMCHVMKKLLASIGVHPTVIELDDHEIDAL-----ASFSSTTPA-AAPAVFMGGSYV 120
           +SCCMCHVMKKLLA+IGVHPTVIELDDHEI AL     +  +   P   APA+F+GG+ V
Sbjct: 61  SSCCMCHVMKKLLATIGVHPTVIELDDHEISALPLPPPSQDNDDAPRNLAPALFIGGTCV 120

Query: 121 GGLESLVALHLSGHLVPKLVEVGALWV 136
           GGLESLVALHLSGHLVPKLVEVGALWV
Sbjct: 121 GGLESLVALHLSGHLVPKLVEVGALWV 147

[Close]
BLAST of CmoCh01G017820 vs. TrEMBL
Match: I1SSK0_HEVBR (Glutaredoxin 2 OS=Hevea brasiliensis GN=Grx2 PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 6.3e-47
Identity = 107/148 (72.30%), Postives = 118/148 (79.73%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLSPPSSVP-------STASLSIDVAESAETRIRRLISEHPVIIFS 60
           MQGLRRCSND + LDL+PPS  P       S+ SLS D  ESAETRI+RLISEHPVIIFS
Sbjct: 1   MQGLRRCSNDAVHLDLTPPSPPPPPPPPPTSSTSLSFDAVESAETRIQRLISEHPVIIFS 60

Query: 61  RTSCCMCHVMKKLLASIGVHPTVIELDDHEIDAL-----ASFSSTTPA-AAPAVFMGGSY 120
           R+SCCMCHVMKKLLA+IGVHPTVIELDDHEI AL     +  +   P   APA+F+GG+ 
Sbjct: 61  RSSCCMCHVMKKLLATIGVHPTVIELDDHEISALPLPPPSHDNDDAPRNLAPALFIGGTC 120

Query: 121 VGGLESLVALHLSGHLVPKLVEVGALWV 136
           VGGLESLVALHLSGHLVPKLVEVGALWV
Sbjct: 121 VGGLESLVALHLSGHLVPKLVEVGALWV 148

[Close]
BLAST of CmoCh01G017820 vs. TrEMBL
Match: A0A067KP67_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07656 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.6e-45
Identity = 106/156 (67.95%), Postives = 120/156 (76.92%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLSPP----------------SSVPSTASLSIDVAESAETRIRRLI 60
           MQGLRRCSND++  DL+PP                SS  S++SLSID AESAETRI+RLI
Sbjct: 1   MQGLRRCSNDVVRFDLTPPPPPPTSTATNSSSASSSSSSSSSSLSIDAAESAETRIQRLI 60

Query: 61  SEHPVIIFSRTSCCMCHVMKKLLASIGVHPTVIELDDHEIDAL----ASFSSTTPA-AAP 120
           SEHPVIIFSR+SCCMCHVMKKLLA++GVHPTVIELDD+EI AL     S  S +P    P
Sbjct: 61  SEHPVIIFSRSSCCMCHVMKKLLATVGVHPTVIELDDNEISALPPPPPSHDSDSPRNLVP 120

Query: 121 AVFMGGSYVGGLESLVALHLSGHLVPKLVEVGALWV 136
           A+F+GG+ VGGLESLVALHLS HLVPKLVEVGALWV
Sbjct: 121 ALFIGGTCVGGLESLVALHLSNHLVPKLVEVGALWV 156

[Close]
BLAST of CmoCh01G017820 vs. TrEMBL
Match: A0A0L9V1W0_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g256100 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 5.9e-45
Identity = 101/142 (71.13%), Postives = 117/142 (82.39%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLSPP-------SSVPSTASLSIDVAESAETRIRRLISEHPVIIFS 60
           MQGLRRCSND++ LDL+ P       S+  S++SLSIDV ES E RI+RLISEHPVIIF+
Sbjct: 1   MQGLRRCSNDVVHLDLTTPTPATTNSSTTSSSSSLSIDVEESTEARIQRLISEHPVIIFT 60

Query: 61  RTSCCMCHVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFMGGSYVGGLES 120
           R+SCCMCHVMKKLLA+IGV+PTVIELDDHEI AL   + T     PAVF+GG+ VGGLES
Sbjct: 61  RSSCCMCHVMKKLLATIGVNPTVIELDDHEIAALPDATRT-----PAVFIGGASVGGLES 120

Query: 121 LVALHLSGHLVPKLVEVGALWV 136
           LVALH+SGHLVPKLV+VGALWV
Sbjct: 121 LVALHVSGHLVPKLVQVGALWV 137

[Close]
BLAST of CmoCh01G017820 vs. TAIR10
Match: AT4G33040.1 (AT4G33040.1 Thioredoxin superfamily protein)

HSP 1 Score: 171.8 bits (434), Expect = 2.9e-43
Identity = 95/140 (67.86%), Postives = 108/140 (77.14%), Query Frame = 1 

Query: 3   GLRRCSNDLLLLDLSPPSSVPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCMCHV 62
           GL+R SND++ LDL+PPS   ST SLSID  ES E +IRRLISEHPVIIFSR+SCCMCHV
Sbjct: 6   GLQRFSNDVVRLDLTPPSQTSST-SLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCHV 65

Query: 63  MKKLLASIGVHPTVIELDDHEIDALA-------SFSSTTPAAAPAVFMGGSYVGGLESLV 122
           MK+LLA+IGV PTVIELDDHE+ +L        S   +     PAVF+G   VGGLESLV
Sbjct: 66  MKRLLATIGVIPTVIELDDHEVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESLV 125

Query: 123 ALHLSGHLVPKLVEVGALWV 136
           ALHLSG LVPKLV+VGALWV
Sbjct: 126 ALHLSGQLVPKLVQVGALWV 144

[Close]
BLAST of CmoCh01G017820 vs. TAIR10
Match: AT5G11930.1 (AT5G11930.1 Thioredoxin superfamily protein)

HSP 1 Score: 157.1 bits (396), Expect = 7.4e-39
Identity = 89/150 (59.33%), Postives = 108/150 (72.00%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLS----PPSSVPSTA-----------SLSIDVAESAETRIRRLIS 60
           M+GLR CSND + LDL+    PP  +P  A           SLS D  E++E++I RLIS
Sbjct: 4   MRGLRNCSNDAVTLDLTVHPPPPPPLPPPAPSTVSSSTASTSLSFDEEETSESKIGRLIS 63

Query: 61  EHPVIIFSR-TSCCMCHVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFMG 120
           EHPVIIF+R +SCCMCHVMKKLL+++GVHPTVIE+DD EI  LA        AAP +F+G
Sbjct: 64  EHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEIDDGEIAYLA------VEAAPVLFIG 123

Query: 121 GSYVGGLESLVALHLSGHLVPKLVEVGALW 135
           G+ VGG ESLVALHLSG L+P+LVEVGALW
Sbjct: 124 GTCVGGFESLVALHLSGQLIPRLVEVGALW 147

[Close]
BLAST of CmoCh01G017820 vs. TAIR10
Match: AT1G28480.1 (AT1G28480.1 Thioredoxin superfamily protein)

HSP 1 Score: 90.9 bits (224), Expect = 6.5e-19
Identity = 52/142 (36.62%), Postives = 80/142 (56.34%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60
           MQG   C+ +  +      S  P    LS+    + E R+R ++ E+ VI+  R  CCMC
Sbjct: 1   MQGTISCARNYNMTTTVGESLRP----LSLKTQGNGE-RVRMVVEENAVIVIGRRGCCMC 60

Query: 61  HVMKKLLASIGVHPTVIELDDH-------EIDALASFSSTTPAAAPAVFMGGSYVGGLES 120
           HV+++LL  +GV+P V+E+D+        E++ +           PAV++GG   GGL+ 
Sbjct: 61  HVVRRLLLGLGVNPAVLEIDEEREDEVLSELENIGVQGGGGTVKLPAVYVGGRLFGGLDR 120

Query: 121 LVALHLSGHLVPKLVEVGALWV 136
           ++A H+SG LVP L EVGALW+
Sbjct: 121 VMATHISGELVPILKEVGALWL 137

[Close]
BLAST of CmoCh01G017820 vs. TAIR10
Match: AT3G02000.1 (AT3G02000.1 Thioredoxin superfamily protein)

HSP 1 Score: 89.4 bits (220), Expect = 1.9e-18
Identity = 48/113 (42.48%), Postives = 67/113 (59.29%), Query Frame = 1 

Query: 32  VAESAETRIRRLISEHPVIIFSRTSCCMCHVMKKLLASIGVHPTVIELDDHE-------- 91
           VA++   RI  L SE  V+IFS ++CCMCH +K L   +GV P V ELD H         
Sbjct: 24  VADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLFRGMGVSPAVHELDLHPYGGDIQRA 83

Query: 92  -IDALASFSSTTPAAAPAVFMGGSYVGGLESLVALHLSGHLVPKLVEVGALWV 136
            I  L    S++P + P VF+GG  VG ++ ++A H++G LVP L + GALW+
Sbjct: 84  LIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASHINGSLVPLLKDAGALWL 136

[Close]
BLAST of CmoCh01G017820 vs. TAIR10
Match: AT5G18600.1 (AT5G18600.1 Thioredoxin superfamily protein)

HSP 1 Score: 87.4 bits (215), Expect = 7.2e-18
Identity = 44/100 (44.00%), Postives = 62/100 (62.00%), Query Frame = 1 

Query: 40  IRRLISEHPVIIFSRTSCCMCHVMKKLLASIGVHPTVIELDD----HEIDALASFSSTTP 99
           I +++ E PV+I+S++SCCM H +K LL   G +P V ELD+     EI+        +P
Sbjct: 4   ITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLGCSP 63

Query: 100 AAAPAVFMGGSYVGGLESLVALHLSGHLVPKLVEVGALWV 136
            A P VF+GG  VGG   +++LHL+G L+P L   GALWV
Sbjct: 64  -AVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]
BLAST of CmoCh01G017820 vs. NCBI nr
Match: gi|449447128|ref|XP_004141321.1| (PREDICTED: glutaredoxin-C6 [Cucumis sativus])

HSP 1 Score: 224.6 bits (571), Expect = 1.1e-55
Identity = 119/136 (87.50%), Postives = 127/136 (93.38%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLSPP-SSVPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCM 60
           MQGLRRCSNDLL LDLSPP S+ PS ASLSIDVAESA+TRIRRLISEHPVIIFSRTSCCM
Sbjct: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFMGGSYVGGLESLVALHL 120
           CHVMKKLLA+IGVHPTVIEL+D EI ALASFSSTT  A PAVF+GG+++GGLESLVALHL
Sbjct: 61  CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTT-TATPAVFIGGAFLGGLESLVALHL 120

Query: 121 SGHLVPKLVEVGALWV 136
           SGHLVPKLVEVGALWV
Sbjct: 121 SGHLVPKLVEVGALWV 135

[Close]
BLAST of CmoCh01G017820 vs. NCBI nr
Match: gi|1009134593|ref|XP_015884532.1| (PREDICTED: glutaredoxin-C6-like [Ziziphus jujuba])

HSP 1 Score: 203.8 bits (517), Expect = 2.0e-49
Identity = 112/142 (78.87%), Postives = 122/142 (85.92%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLSP-PSSVPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCM 60
           MQGLRRCSND++ +DL P P++  + +SLSIDVAESAETRIRRLISEHPVIIFSR SCCM
Sbjct: 1   MQGLRRCSNDVVHVDLPPAPAATTTASSLSIDVAESAETRIRRLISEHPVIIFSRNSCCM 60

Query: 61  CHVMKKLLASIGVHPTVIELDDHEIDALASFS-----STTPA-AAPAVFMGGSYVGGLES 120
           CHVMKKLLA+IGVHPTVIELDDHEI AL S S     S  P  +APAVF+GGS VGGLES
Sbjct: 61  CHVMKKLLATIGVHPTVIELDDHEIAALPSCSPAHDNSDHPRHSAPAVFIGGSCVGGLES 120

Query: 121 LVALHLSGHLVPKLVEVGALWV 136
           LVALHLSGHLVPKLVEVGALWV
Sbjct: 121 LVALHLSGHLVPKLVEVGALWV 142

[Close]
BLAST of CmoCh01G017820 vs. NCBI nr
Match: gi|329750629|gb|AEC03330.1| (glutaredoxin 2.1 [Hevea brasiliensis])

HSP 1 Score: 195.7 bits (496), Expect = 5.3e-47
Identity = 107/147 (72.79%), Postives = 118/147 (80.27%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLSPPSSVP------STASLSIDVAESAETRIRRLISEHPVIIFSR 60
           MQGLRRCSND + LDL+PPS  P      S+ SLS D  ESAETRI+RLISEHPVIIFSR
Sbjct: 1   MQGLRRCSNDAVHLDLTPPSPPPPPPPPTSSTSLSFDAVESAETRIQRLISEHPVIIFSR 60

Query: 61  TSCCMCHVMKKLLASIGVHPTVIELDDHEIDAL-----ASFSSTTPA-AAPAVFMGGSYV 120
           +SCCMCHVMKKLLA+IGVHPTVIELDDHEI AL     +  +   P   APA+F+GG+ V
Sbjct: 61  SSCCMCHVMKKLLATIGVHPTVIELDDHEISALPLPPPSQDNDDAPRNLAPALFIGGTCV 120

Query: 121 GGLESLVALHLSGHLVPKLVEVGALWV 136
           GGLESLVALHLSGHLVPKLVEVGALWV
Sbjct: 121 GGLESLVALHLSGHLVPKLVEVGALWV 147

[Close]
BLAST of CmoCh01G017820 vs. NCBI nr
Match: gi|329750627|gb|AEC03329.1| (glutaredoxin 2 [Hevea brasiliensis])

HSP 1 Score: 194.9 bits (494), Expect = 9.1e-47
Identity = 107/148 (72.30%), Postives = 118/148 (79.73%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLSPPSSVP-------STASLSIDVAESAETRIRRLISEHPVIIFS 60
           MQGLRRCSND + LDL+PPS  P       S+ SLS D  ESAETRI+RLISEHPVIIFS
Sbjct: 1   MQGLRRCSNDAVHLDLTPPSPPPPPPPPPTSSTSLSFDAVESAETRIQRLISEHPVIIFS 60

Query: 61  RTSCCMCHVMKKLLASIGVHPTVIELDDHEIDAL-----ASFSSTTPA-AAPAVFMGGSY 120
           R+SCCMCHVMKKLLA+IGVHPTVIELDDHEI AL     +  +   P   APA+F+GG+ 
Sbjct: 61  RSSCCMCHVMKKLLATIGVHPTVIELDDHEISALPLPPPSHDNDDAPRNLAPALFIGGTC 120

Query: 121 VGGLESLVALHLSGHLVPKLVEVGALWV 136
           VGGLESLVALHLSGHLVPKLVEVGALWV
Sbjct: 121 VGGLESLVALHLSGHLVPKLVEVGALWV 148

[Close]
BLAST of CmoCh01G017820 vs. NCBI nr
Match: gi|470109536|ref|XP_004291050.1| (PREDICTED: glutaredoxin-C6 [Fragaria vesca subsp. vesca])

HSP 1 Score: 194.1 bits (492), Expect = 1.6e-46
Identity = 105/139 (75.54%), Postives = 116/139 (83.45%), Query Frame = 1 

Query: 1   MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60
           MQGLRRCSND++ L LSP    P+ +SLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC
Sbjct: 1   MQGLRRCSNDVVHLGLSPSPPPPNPSSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60

Query: 61  HVMKKLLASIGVHPTVIELDDHEIDALASFSSTTP------AAAPAVFMGGSYVGGLESL 120
           HVMKKLLA+IGVHPTVIELDDHEI AL S   ++          P+VF+GGS VGGLESL
Sbjct: 61  HVMKKLLATIGVHPTVIELDDHEIAALPSPPPSSDDDHPRNNIPPSVFIGGSCVGGLESL 120

Query: 121 VALHLSGHLVPKLVEVGAL 134
           VALHL+GHLVPKL+EVGAL
Sbjct: 121 VALHLTGHLVPKLLEVGAL 139

The following BLAST results are available for this feature:
BLAST of CmoCh01G017820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GRXC6_ARATH5.2e-4267.86Glutaredoxin-C6 OS=Arabidopsis thaliana GN=GRXC6 PE=2 SV=2[more]
GRC10_ARATH1.3e-3759.33Glutaredoxin-C10 OS=Arabidopsis thaliana GN=GRXC10 PE=2 SV=1[more]
GRXC7_ORYSJ1.7e-2458.00Glutaredoxin-C7 OS=Oryza sativa subsp. japonica GN=GRXC7 PE=3 SV=1[more]
GRXC5_ORYSJ1.5e-2041.80Glutaredoxin-C5 OS=Oryza sativa subsp. japonica GN=GRXC5 PE=2 SV=2[more]
GRXS2_ORYSJ3.3e-2051.75Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica GN=GRXS2 PE=2 SV=1[more]
BLAST of CmoCh01G017820 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5B1_CUCSA7.5e-5687.50Uncharacterized protein OS=Cucumis sativus GN=Csa_4G646150 PE=4 SV=1[more]
I1SSK1_HEVBR3.7e-4772.79Glutaredoxin 2.1 OS=Hevea brasiliensis GN=Grx2.1 PE=2 SV=1[more]
I1SSK0_HEVBR6.3e-4772.30Glutaredoxin 2 OS=Hevea brasiliensis GN=Grx2 PE=2 SV=1[more]
A0A067KP67_JATCU1.6e-4567.95Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07656 PE=4 SV=1[more]
A0A0L9V1W0_PHAAN5.9e-4571.13Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g256100 PE=4 SV=1[more]
BLAST of CmoCh01G017820 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G33040.12.9e-4367.86 Thioredoxin superfamily protein[more]
AT5G11930.17.4e-3959.33 Thioredoxin superfamily protein[more]
AT1G28480.16.5e-1936.62 Thioredoxin superfamily protein[more]
AT3G02000.11.9e-1842.48 Thioredoxin superfamily protein[more]
AT5G18600.17.2e-1844.00 Thioredoxin superfamily protein[more]
BLAST of CmoCh01G017820 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449447128|ref|XP_004141321.1|1.1e-5587.50PREDICTED: glutaredoxin-C6 [Cucumis sativus][more]
gi|1009134593|ref|XP_015884532.1|2.0e-4978.87PREDICTED: glutaredoxin-C6-like [Ziziphus jujuba][more]
gi|329750629|gb|AEC03330.1|5.3e-4772.79glutaredoxin 2.1 [Hevea brasiliensis][more]
gi|329750627|gb|AEC03329.1|9.1e-4772.30glutaredoxin 2 [Hevea brasiliensis][more]
gi|470109536|ref|XP_004291050.1|1.6e-4675.54PREDICTED: glutaredoxin-C6 [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002109Glutaredoxin
IPR011905GlrX-like_pln_2
IPR012336Thioredoxin-like_fold
IPR014025Glutaredoxin_subgr
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO:0015035protein disulfide oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0008152 metabolic process
biological_process GO:0022900 electron transport chain
cellular_component GO:0005623 cell
cellular_component GO:0005777 peroxisome
cellular_component GO:0005575 cellular_component
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0016787 hydrolase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G017820.1CmoCh01G017820.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 49..108
score: 3.
IPR002109GlutaredoxinPROFILEPS51354GLUTAREDOXIN_2coord: 37..134
score: 20
IPR011905Glutaredoxin-like, plant IITIGRFAMsTIGR02189TIGR02189coord: 40..135
score: 1.3
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 32..135
score: 1.5
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 36..134
score: 1.39
IPR014025Glutaredoxin subgroupPRINTSPR00160GLUTAREDOXINcoord: 91..104
score: 5.5E-6coord: 105..118
score: 5.5E-6coord: 49..67
score: 5.
NoneNo IPR availablePANTHERPTHR10168GLUTAREDOXINcoord: 5..135
score: 1.5
NoneNo IPR availablePANTHERPTHR10168:SF56GLUTAREDOXIN-C10-RELATEDcoord: 5..135
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh01G017820Cucsa.299470Cucumber (Gy14) v1cgycmoB0821
CmoCh01G017820CmaCh09G003400Cucurbita maxima (Rimu)cmacmoB042
CmoCh01G017820CmaCh01G017310Cucurbita maxima (Rimu)cmacmoB470
CmoCh01G017820Cla020871Watermelon (97103) v1cmowmB429
CmoCh01G017820Csa4G646150Cucumber (Chinese Long) v2cmocuB453
CmoCh01G017820MELO3C016878Melon (DHL92) v3.5.1cmomeB435
CmoCh01G017820ClCG05G017930Watermelon (Charleston Gray)cmowcgB408
CmoCh01G017820CSPI04G25380Wild cucumber (PI 183967)cmocpiB457
CmoCh01G017820Lsi04G014200Bottle gourd (USVL1VR-Ls)cmolsiB422
CmoCh01G017820Cp4.1LG02g05990Cucurbita pepo (Zucchini)cmocpeB445
CmoCh01G017820MELO3C016878.2Melon (DHL92) v3.6.1cmomedB499
CmoCh01G017820CsaV3_4G035710Cucumber (Chinese Long) v3cmocucB0541
CmoCh01G017820Cla97C05G099230Watermelon (97103) v2cmowmbB456
CmoCh01G017820Bhi09G002575Wax gourdcmowgoB0617
CmoCh01G017820CsGy4G023680Cucumber (Gy14) v2cgybcmoB475
CmoCh01G017820Carg10694Silver-seed gourdcarcmoB1043
CmoCh01G017820Carg21732Silver-seed gourdcarcmoB0442
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh01G017820CmoCh09G003400Cucurbita moschata (Rifu)cmocmoB014
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh01G017820Cucurbita moschata (Rifu)cmocmoB067
CmoCh01G017820Cucurbita pepo (Zucchini)cmocpeB462
CmoCh01G017820Cucumber (Gy14) v2cgybcmoB103
CmoCh01G017820Cucumber (Gy14) v2cgybcmoB926
CmoCh01G017820Melon (DHL92) v3.6.1cmomedB455
CmoCh01G017820Silver-seed gourdcarcmoB0133
CmoCh01G017820Wax gourdcmowgoB0629