Carg11929 (gene) Silver-seed gourd

Overview
NameCarg11929
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionGlutaredoxin
LocationCucurbita_argyrosperma_scaffold_036 : 845980 .. 846931 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GACCGAACAAGTCCCTTGCCTCTTCGCAAATTTAACAATTCCCCTTCCGCTATATCTCTCTCCGCCGTCTCTCCCAATTCTCCGGCGATGAACCTCTGTGCAAACGACGTTGTATCCTCCGAACTTCCTCCTTCTCCGACCTCCTCCTCCTCCTTATCCATCGACGTCGATGAGTCGTCTGAAGCTCGGATCCGGCGGTTGATTACAGAGCATCCGGTGATCATATTCAGCCGCTCCTCCTGCAGCATGTGCCACGTCATGAAGACTCTCCTCGCCATCATCGGCGTCCATCCTACAGTCATCGAGCTTAATGATCACGACGAAATCGCCGCCGTTCCTTGTTCATCTTTCGTTCGGGATAGTTCGGCGCCGGCGGTTTTCATCGGTGGGGCTAGCTTCGGCGGCTTGGAGACTCTGGTCGCTCTCCATCTTAGTGGCCATCTCGTTCCTAAACTTATCGAAGTTGGAGCTCTCACGGTATGAACCCTTAGATTTGGAATTTCGTTTTAAATTCTCTTAAAAGATATATTTAAAATGATTTTTTTGTTCTAAATTTATGTTAGTTTTTTCAAATTCAAAGAAAAATATAATTTATTTCATTATATCATTTCTGAAAGTAAAATGAAATTAAAATTTGTGTTTGAAATGAGACATTTAAACGCTGCAGGTGGGACACGTGCAGTGCTAAAAGTGGAGAATCAGGAATGATGGTCATGCAGATGCGCTACACATGATTTCTGCCTCTGTCCAATTGGTGGGGTACTTTTGTAATTATTGGCAAATTCTCTGGTCGCCACCGTATAACCCGTGGGTATCGTCGTAGCCTAAATATTCTCTTATTCCTCCCCAAGACGAAAAAAAAAAAAAAAGTTAGTTTTGGTTTTATTATTACTTTTATCTCTTTTTTGTTTGTAATATGATAATATCTTAATAATTATTAAATATAAAAATT

mRNA sequence

GACCGAACAAGTCCCTTGCCTCTTCGCAAATTTAACAATTCCCCTTCCGCTATATCTCTCTCCGCCGTCTCTCCCAATTCTCCGGCGATGAACCTCTGTGCAAACGACGTTGTATCCTCCGAACTTCCTCCTTCTCCGACCTCCTCCTCCTCCTTATCCATCGACGTCGATGAGTCGTCTGAAGCTCGGATCCGGCGGTTGATTACAGAGCATCCGGTGATCATATTCAGCCGCTCCTCCTGCAGCATGTGCCACGTCATGAAGACTCTCCTCGCCATCATCGGCGTCCATCCTACAGTCATCGAGCTTAATGATCACGACGAAATCGCCGCCGTTCCTTGTTCATCTTTCGTTCGGGATAGTTCGGCGCCGGCGGTTTTCATCGGTGGGGCTAGCTTCGGCGGCTTGGAGACTCTGGTCGCTCTCCATCTTAGTGGCCATCTCGTTCCTAAACTTATCGAAGTTGGAGCTCTCACGGTGGGACACGTGCAGTGCTAAAAGTGGAGAATCAGGAATGATGGTCATGCAGATGCGCTACACATGATTTCTGCCTCTGTCCAATTGGTGGGGTACTTTTGTAATTATTGGCAAATTCTCTGGTCGCCACCGTATAACCCGTGGGTATCGTCGTAGCCTAAATATTCTCTTATTCCTCCCCAAGACGAAAAAAAAAAAAAAAGTTAGTTTTGGTTTTATTATTACTTTTATCTCTTTTTTGTTTGTAATATGATAATATCTTAATAATTATTAAATATAAAAATT

Coding sequence (CDS)

ATGAACCTCTGTGCAAACGACGTTGTATCCTCCGAACTTCCTCCTTCTCCGACCTCCTCCTCCTCCTTATCCATCGACGTCGATGAGTCGTCTGAAGCTCGGATCCGGCGGTTGATTACAGAGCATCCGGTGATCATATTCAGCCGCTCCTCCTGCAGCATGTGCCACGTCATGAAGACTCTCCTCGCCATCATCGGCGTCCATCCTACAGTCATCGAGCTTAATGATCACGACGAAATCGCCGCCGTTCCTTGTTCATCTTTCGTTCGGGATAGTTCGGCGCCGGCGGTTTTCATCGGTGGGGCTAGCTTCGGCGGCTTGGAGACTCTGGTCGCTCTCCATCTTAGTGGCCATCTCGTTCCTAAACTTATCGAAGTTGGAGCTCTCACGGTGGGACACGTGCAGTGCTAA

Protein sequence

MNLCANDVVSSELPPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELNDHDEIAAVPCSSFVRDSSAPAVFIGGASFGGLETLVALHLSGHLVPKLIEVGALTVGHVQC
Homology
[Close]
BLAST of Carg11929 vs. NCBI nr
Match: XP_023546567.1 (glutaredoxin-C6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.4 bits (664), Expect = 3.5e-66
Identity = 135/136 (99.26%), Postives = 135/136 (99.26%), Query Frame = 0 

Query: 1   MNLCANDVVSSELPPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKT 60
           MNLCANDVVSSELPPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKT
Sbjct: 1   MNLCANDVVSSELPPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKT 60

Query: 61  LLAIIGVHPTVIELNDHDEIAAVPCSSFVRDSSAPAVFIGGASFGGLETLVALHLSGHLV 120
           LLAIIGVHPTVIELNDHDEIAAVP SSFVRDSSAPAVFIGGASFGGLETLVALHLSGHLV
Sbjct: 61  LLAIIGVHPTVIELNDHDEIAAVPSSSFVRDSSAPAVFIGGASFGGLETLVALHLSGHLV 120

Query: 121 PKLIEVGALTVGHVQC 137
           PKLIEVGALTVGHVQC
Sbjct: 121 PKLIEVGALTVGHVQC 136

[Close]
BLAST of Carg11929 vs. NCBI nr
Match: XP_022961714.1 (glutaredoxin-C6-like [Cucurbita moschata])

HSP 1 Score: 260.0 bits (663), Expect = 4.5e-66
Identity = 134/136 (98.53%), Postives = 135/136 (99.26%), Query Frame = 0 

Query: 1   MNLCANDVVSSELPPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKT 60
           MNLCANDVVSSELPPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKT
Sbjct: 1   MNLCANDVVSSELPPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKT 60

Query: 61  LLAIIGVHPTVIELNDHDEIAAVPCSSFVRDSSAPAVFIGGASFGGLETLVALHLSGHLV 120
           LLAIIGVHPTVIELNDHDEIAAVP SSF+RDSSAPAVFIGGASFGGLETLVALHLSGHLV
Sbjct: 61  LLAIIGVHPTVIELNDHDEIAAVPSSSFIRDSSAPAVFIGGASFGGLETLVALHLSGHLV 120

Query: 121 PKLIEVGALTVGHVQC 137
           PKLIEVGALTVGHVQC
Sbjct: 121 PKLIEVGALTVGHVQC 136

[Close]
BLAST of Carg11929 vs. NCBI nr
Match: XP_022997508.1 (glutaredoxin-C6-like [Cucurbita maxima])

HSP 1 Score: 258.5 bits (659), Expect = 1.3e-65
Identity = 134/136 (98.53%), Postives = 134/136 (98.53%), Query Frame = 0 

Query: 1   MNLCANDVVSSELPPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKT 60
           MNLCANDVVSSELPPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKT
Sbjct: 1   MNLCANDVVSSELPPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKT 60

Query: 61  LLAIIGVHPTVIELNDHDEIAAVPCSSFVRDSSAPAVFIGGASFGGLETLVALHLSGHLV 120
           LLAIIGVHPTVIELNDHDEIAAVP SSFVRDSSAPAVFIGGASFGGLETLVALHLSGHLV
Sbjct: 61  LLAIIGVHPTVIELNDHDEIAAVPSSSFVRDSSAPAVFIGGASFGGLETLVALHLSGHLV 120

Query: 121 PKLIEVGALTVGHVQC 137
           PKLIEVGAL VGHVQC
Sbjct: 121 PKLIEVGALAVGHVQC 136

[Close]
BLAST of Carg11929 vs. NCBI nr
Match: XP_008444458.1 (PREDICTED: glutaredoxin-C6-like isoform X2 [Cucumis melo])

HSP 1 Score: 208.0 bits (528), Expect = 2.0e-50
Identity = 110/136 (80.88%), Postives = 113/136 (83.09%), Query Frame = 0 

Query: 1   MNLCANDVVSSELPPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKT 60
           M    ND VS E PPS             SSE RIRRLITEHPVIIFSRSSCSMCHVMKT
Sbjct: 1   MRRSTNDAVSFEFPPSXXXXXXXXXXXXXSSETRIRRLITEHPVIIFSRSSCSMCHVMKT 60

Query: 61  LLAIIGVHPTVIELNDHDEIAAVPCSSFVRDSSAPAVFIGGASFGGLETLVALHLSGHLV 120
           LLAIIGVHPTVIE++DHDEIAAVP SSFVRDSSAPAVFIGGASFGGLE+LVALHLSGHLV
Sbjct: 61  LLAIIGVHPTVIEVDDHDEIAAVPSSSFVRDSSAPAVFIGGASFGGLESLVALHLSGHLV 120

Query: 121 PKLIEVGALTVGHVQC 137
           PKLIEVGAL VGHVQC
Sbjct: 121 PKLIEVGALPVGHVQC 136

[Close]
BLAST of Carg11929 vs. NCBI nr
Match: XP_004142929.1 (PREDICTED: glutaredoxin-C6-like [Cucumis sativus] >KGN62384.1 Glutaredoxin [Cucumis sativus])

HSP 1 Score: 207.2 bits (526), Expect = 3.5e-50
Identity = 109/136 (80.15%), Postives = 114/136 (83.82%), Query Frame = 0 

Query: 1   MNLCANDVVSSELPPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKT 60
           M+   ND VS E PPS             SSE RIRRLIT+HPVIIFSRSSCSMCHVMKT
Sbjct: 1   MHRSTNDAVSFEFPPSXXXXXXXXXXXXXSSETRIRRLITDHPVIIFSRSSCSMCHVMKT 60

Query: 61  LLAIIGVHPTVIELNDHDEIAAVPCSSFVRDSSAPAVFIGGASFGGLETLVALHLSGHLV 120
           LLAIIGVHPTVIE++DHDEIAAVP SSFVRDSSAPAVFIGGASFGGLE+LVALHLSGHLV
Sbjct: 61  LLAIIGVHPTVIEVDDHDEIAAVPSSSFVRDSSAPAVFIGGASFGGLESLVALHLSGHLV 120

Query: 121 PKLIEVGALTVGHVQC 137
           PKLIEVGAL VGHVQC
Sbjct: 121 PKLIEVGALPVGHVQC 136

[Close]
BLAST of Carg11929 vs. TAIR10
Match: AT4G33040.1 (Thioredoxin superfamily protein)

HSP 1 Score: 148.7 bits (374), Expect = 2.7e-36
Identity = 88/135 (65.19%), Postives = 104/135 (77.04%), Query Frame = 0 

Query: 5   ANDVVSSEL-PPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKTLLA 64
           +NDVV  +L PPS TSS+SLSID +ES+EA+IRRLI+EHPVIIFSRSSC MCHVMK LLA
Sbjct: 11  SNDVVRLDLTPPSQTSSTSLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCHVMKRLLA 70

Query: 65  IIGVHPTVIELNDHDEIAAVPCSSFVRDSSA-------PAVFIGGASFGGLETLVALHLS 124
            IGV PTVIEL+DH E++++P +     S         PAVFIG    GGLE+LVALHLS
Sbjct: 71  TIGVIPTVIELDDH-EVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESLVALHLS 130

Query: 125 GHLVPKLIEVGALTV 132
           G LVPKL++VGAL V
Sbjct: 131 GQLVPKLVQVGALWV 144

[Close]
BLAST of Carg11929 vs. TAIR10
Match: AT5G11930.1 (Thioredoxin superfamily protein)

HSP 1 Score: 113.6 bits (283), Expect = 9.5e-26
Identity = 61/99 (61.62%), Postives = 77/99 (77.78%), Query Frame = 0 

Query: 32  EARIRRLITEHPVIIFSR-SSCSMCHVMKTLLAIIGVHPTVIELNDHDEIAAVPCSSFVR 91
           E++I RLI+EHPVIIF+R SSC MCHVMK LL+ +GVHPTVIE++D  EIA      ++ 
Sbjct: 55  ESKIGRLISEHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEIDD-GEIA------YLA 114

Query: 92  DSSAPAVFIGGASFGGLETLVALHLSGHLVPKLIEVGAL 130
             +AP +FIGG   GG E+LVALHLSG L+P+L+EVGAL
Sbjct: 115 VEAAPVLFIGGTCVGGFESLVALHLSGQLIPRLVEVGAL 146

[Close]
BLAST of Carg11929 vs. TAIR10
Match: AT1G28480.1 (Thioredoxin superfamily protein)

HSP 1 Score: 79.3 bits (194), Expect = 2.0e-15
Identity = 46/113 (40.71%), Postives = 71/113 (62.83%), Query Frame = 0 

Query: 23  LSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELND--HDEI 82
           LS+    + E R+R ++ E+ VI+  R  C MCHV++ LL  +GV+P V+E+++   DE+
Sbjct: 24  LSLKTQGNGE-RVRMVVEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEEREDEV 83

Query: 83  AAVPCSSFVRDSSA----PAVFIGGASFGGLETLVALHLSGHLVPKLIEVGAL 130
            +   +  V+        PAV++GG  FGGL+ ++A H+SG LVP L EVGAL
Sbjct: 84  LSELENIGVQGGGGTVKLPAVYVGGRLFGGLDRVMATHISGELVPILKEVGAL 135

[Close]
BLAST of Carg11929 vs. TAIR10
Match: AT4G15680.1 (Thioredoxin superfamily protein)

HSP 1 Score: 73.9 bits (180), Expect = 8.3e-14
Identity = 42/103 (40.78%), Postives = 62/103 (60.19%), Query Frame = 0 

Query: 34  RIRRLITEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELND-------HDEIAAVPCS 93
           +++++I+E  V+IFS++SC M H +KTL    GV+PT+ EL++          +A + CS
Sbjct: 3   KLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLGCS 62

Query: 94  SFVRDSSAPAVFIGGASFGGLETLVALHLSGHLVPKLIEVGAL 130
             V     P VFIGG   GG   +++LHL+  LVP L  VGAL
Sbjct: 63  PTV-----PVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGAL 100

[Close]
BLAST of Carg11929 vs. TAIR10
Match: AT5G18600.1 (Thioredoxin superfamily protein)

HSP 1 Score: 73.9 bits (180), Expect = 8.3e-14
Identity = 42/104 (40.38%), Postives = 59/104 (56.73%), Query Frame = 0 

Query: 35  IRRLITEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELND-------HDEIAAVPCSS 94
           I +++ E PV+I+S+SSC M H +KTLL   G +P V EL++          +  + CS 
Sbjct: 4   ITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLGCSP 63

Query: 95  FVRDSSAPAVFIGGASFGGLETLVALHLSGHLVPKLIEVGALTV 132
            V     P VFIGG   GG   +++LHL+G L+P L   GAL V
Sbjct: 64  AV-----PGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]
BLAST of Carg11929 vs. Swiss-Prot
Match: sp|Q8L9S3|GRXC6_ARATH (Glutaredoxin-C6 OS=Arabidopsis thaliana OX=3702 GN=GRXC6 PE=2 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 4.8e-35
Identity = 88/135 (65.19%), Postives = 104/135 (77.04%), Query Frame = 0 

Query: 5   ANDVVSSEL-PPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKTLLA 64
           +NDVV  +L PPS TSS+SLSID +ES+EA+IRRLI+EHPVIIFSRSSC MCHVMK LLA
Sbjct: 11  SNDVVRLDLTPPSQTSSTSLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCHVMKRLLA 70

Query: 65  IIGVHPTVIELNDHDEIAAVPCSSFVRDSSA-------PAVFIGGASFGGLETLVALHLS 124
            IGV PTVIEL+DH E++++P +     S         PAVFIG    GGLE+LVALHLS
Sbjct: 71  TIGVIPTVIELDDH-EVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESLVALHLS 130

Query: 125 GHLVPKLIEVGALTV 132
           G LVPKL++VGAL V
Sbjct: 131 GQLVPKLVQVGALWV 144

[Close]
BLAST of Carg11929 vs. Swiss-Prot
Match: sp|Q29PZ1|GRC10_ARATH (Glutaredoxin-C10 OS=Arabidopsis thaliana OX=3702 GN=GRXC10 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.7e-24
Identity = 61/99 (61.62%), Postives = 77/99 (77.78%), Query Frame = 0 

Query: 32  EARIRRLITEHPVIIFSR-SSCSMCHVMKTLLAIIGVHPTVIELNDHDEIAAVPCSSFVR 91
           E++I RLI+EHPVIIF+R SSC MCHVMK LL+ +GVHPTVIE++D  EIA      ++ 
Sbjct: 55  ESKIGRLISEHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEIDD-GEIA------YLA 114

Query: 92  DSSAPAVFIGGASFGGLETLVALHLSGHLVPKLIEVGAL 130
             +AP +FIGG   GG E+LVALHLSG L+P+L+EVGAL
Sbjct: 115 VEAAPVLFIGGTCVGGFESLVALHLSGQLIPRLVEVGAL 146

[Close]
BLAST of Carg11929 vs. Swiss-Prot
Match: sp|Q0DK35|GRXC7_ORYSJ (Glutaredoxin-C7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC7 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.4e-17
Identity = 50/101 (49.50%), Postives = 60/101 (59.41%), Query Frame = 0 

Query: 29  ESSEARIRRLITEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELNDHDEIAAVPCSSF 88
           E    RI RL+ E PV+IF+R  C MCHVM+ LLA +G H TVIEL   D          
Sbjct: 39  EQPAERIGRLVRESPVVIFARRGCCMCHVMRRLLAAVGAHATVIEL---DXXXXXXXXXX 98

Query: 89  VRDSSAPAVFIGGASFGGLETLVALHLSGHLVPKLIEVGAL 130
                   +F+GGA  GGL+ L+ LHLSG LVP+L EVGAL
Sbjct: 99  XXXXXXXXLFVGGAPVGGLDGLMGLHLSGRLVPRLREVGAL 136

[Close]
BLAST of Carg11929 vs. Swiss-Prot
Match: sp|Q5SMY5|GRXS2_ORYSJ (Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS2 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 7.7e-17
Identity = 52/111 (46.85%), Postives = 66/111 (59.46%), Query Frame = 0 

Query: 22  SLSID---VDESSEARIRRLITEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELNDHD 81
           SL+ID    +E+   R+ RL+ E PV++F+R  C M HVM+ LLA +G H TVIEL    
Sbjct: 15  SLTIDPAGEEEAPAERVGRLVRESPVVVFARRGCYMAHVMRRLLAAVGAHATVIEL--EG 74

Query: 82  EIAAVPCSSFVRDSSAPAVFIGGASFGGLETLVALHLSGHLVPKLIEVGAL 130
                           PA+F+GG   GGLE L+ LHLSG LVP+L EVGAL
Sbjct: 75  XXXXXXXXXXXXXXXLPALFVGGDPVGGLEGLMGLHLSGRLVPRLREVGAL 123

[Close]
BLAST of Carg11929 vs. Swiss-Prot
Match: sp|Q7G8Y5|GRXC1_ORYSJ (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.6e-14
Identity = 44/101 (43.56%), Postives = 60/101 (59.41%), Query Frame = 0 

Query: 34  RIRRLITEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELNDH---DEIAAVPCSSFVR 93
           R+ RL  +  V+IFS SSC MCH +  L   +GV+PTV+EL++     E+         R
Sbjct: 3   RVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLLGR 62

Query: 94  DSSAPAVFIGGASFGGLETLVALHLSGHLVPKLIEVGALTV 132
             + PAVFIGG   G  + +++LHLSG+LVP L   GAL V
Sbjct: 63  SPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLRNAGALWV 103

[Close]
BLAST of Carg11929 vs. TrEMBL
Match: tr|A0A1S3BAG0|A0A1S3BAG0_CUCME (glutaredoxin-C6-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487778 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.3e-50
Identity = 110/136 (80.88%), Postives = 113/136 (83.09%), Query Frame = 0 

Query: 1   MNLCANDVVSSELPPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKT 60
           M    ND VS E PPS             SSE RIRRLITEHPVIIFSRSSCSMCHVMKT
Sbjct: 1   MRRSTNDAVSFEFPPSXXXXXXXXXXXXXSSETRIRRLITEHPVIIFSRSSCSMCHVMKT 60

Query: 61  LLAIIGVHPTVIELNDHDEIAAVPCSSFVRDSSAPAVFIGGASFGGLETLVALHLSGHLV 120
           LLAIIGVHPTVIE++DHDEIAAVP SSFVRDSSAPAVFIGGASFGGLE+LVALHLSGHLV
Sbjct: 61  LLAIIGVHPTVIEVDDHDEIAAVPSSSFVRDSSAPAVFIGGASFGGLESLVALHLSGHLV 120

Query: 121 PKLIEVGALTVGHVQC 137
           PKLIEVGAL VGHVQC
Sbjct: 121 PKLIEVGALPVGHVQC 136

[Close]
BLAST of Carg11929 vs. TrEMBL
Match: tr|A0A0A0LN11|A0A0A0LN11_CUCSA (Glutaredoxin OS=Cucumis sativus OX=3659 GN=Csa_2G351650 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.3e-50
Identity = 109/136 (80.15%), Postives = 114/136 (83.82%), Query Frame = 0 

Query: 1   MNLCANDVVSSELPPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKT 60
           M+   ND VS E PPS             SSE RIRRLIT+HPVIIFSRSSCSMCHVMKT
Sbjct: 1   MHRSTNDAVSFEFPPSXXXXXXXXXXXXXSSETRIRRLITDHPVIIFSRSSCSMCHVMKT 60

Query: 61  LLAIIGVHPTVIELNDHDEIAAVPCSSFVRDSSAPAVFIGGASFGGLETLVALHLSGHLV 120
           LLAIIGVHPTVIE++DHDEIAAVP SSFVRDSSAPAVFIGGASFGGLE+LVALHLSGHLV
Sbjct: 61  LLAIIGVHPTVIEVDDHDEIAAVPSSSFVRDSSAPAVFIGGASFGGLESLVALHLSGHLV 120

Query: 121 PKLIEVGALTVGHVQC 137
           PKLIEVGAL VGHVQC
Sbjct: 121 PKLIEVGALPVGHVQC 136

[Close]
BLAST of Carg11929 vs. TrEMBL
Match: tr|A0A1S4DVC0|A0A1S4DVC0_CUCME (glutaredoxin-C6-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487778 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.0e-46
Identity = 104/129 (80.62%), Postives = 107/129 (82.95%), Query Frame = 0 

Query: 1   MNLCANDVVSSELPPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKT 60
           M    ND VS E PPS             SSE RIRRLITEHPVIIFSRSSCSMCHVMKT
Sbjct: 1   MRRSTNDAVSFEFPPSXXXXXXXXXXXXXSSETRIRRLITEHPVIIFSRSSCSMCHVMKT 60

Query: 61  LLAIIGVHPTVIELNDHDEIAAVPCSSFVRDSSAPAVFIGGASFGGLETLVALHLSGHLV 120
           LLAIIGVHPTVIE++DHDEIAAVP SSFVRDSSAPAVFIGGASFGGLE+LVALHLSGHLV
Sbjct: 61  LLAIIGVHPTVIEVDDHDEIAAVPSSSFVRDSSAPAVFIGGASFGGLESLVALHLSGHLV 120

Query: 121 PKLIEVGAL 130
           PKLIEVGAL
Sbjct: 121 PKLIEVGAL 129

[Close]
BLAST of Carg11929 vs. TrEMBL
Match: tr|K7KI77|K7KI77_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100791969 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.4e-36
Identity = 89/134 (66.42%), Postives = 110/134 (82.09%), Query Frame = 0 

Query: 4   CANDVVSSELPPSPT---SSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKT 63
           C+NDVV  +L  SPT   SSSSLS+++DES E+RI+RLI+EHPVIIF+RSSC MCHVMK 
Sbjct: 9   CSNDVV-GQLELSPTMSNSSSSLSMELDESPESRIQRLISEHPVIIFTRSSCCMCHVMKK 68

Query: 64  LLAIIGVHPTVIELNDHDEIAAVPCSSFVRDSSAPAVFIGGASFGGLETLVALHLSGHLV 123
           LLA IGVHPTVIEL+DH EIA++P    + D++APA FIGG   GGLE+LVALH+SGHL+
Sbjct: 69  LLATIGVHPTVIELDDH-EIASLP----LPDTTAPAAFIGGTCIGGLESLVALHVSGHLI 128

Query: 124 PKLIEVGALTVGHV 135
           PKL++VGAL  G +
Sbjct: 129 PKLVQVGALWFGRI 136

[Close]
BLAST of Carg11929 vs. TrEMBL
Match: tr|I1JTX4|I1JTX4_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100791969 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 7.2e-36
Identity = 88/129 (68.22%), Postives = 108/129 (83.72%), Query Frame = 0 

Query: 4   CANDVVSSELPPSPT---SSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKT 63
           C+NDVV  +L  SPT   SSSSLS+++DES E+RI+RLI+EHPVIIF+RSSC MCHVMK 
Sbjct: 9   CSNDVV-GQLELSPTMSNSSSSLSMELDESPESRIQRLISEHPVIIFTRSSCCMCHVMKK 68

Query: 64  LLAIIGVHPTVIELNDHDEIAAVPCSSFVRDSSAPAVFIGGASFGGLETLVALHLSGHLV 123
           LLA IGVHPTVIEL+DH EIA++P    + D++APA FIGG   GGLE+LVALH+SGHL+
Sbjct: 69  LLATIGVHPTVIELDDH-EIASLP----LPDTTAPAAFIGGTCIGGLESLVALHVSGHLI 128

Query: 124 PKLIEVGAL 130
           PKL++VGAL
Sbjct: 129 PKLVQVGAL 131

The following BLAST results are available for this feature:
BLAST of Carg11929 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023546567.13.5e-6699.26glutaredoxin-C6-like [Cucurbita pepo subsp. pepo][more]
XP_022961714.14.5e-6698.53glutaredoxin-C6-like [Cucurbita moschata][more]
XP_022997508.11.3e-6598.53glutaredoxin-C6-like [Cucurbita maxima][more]
XP_008444458.12.0e-5080.88PREDICTED: glutaredoxin-C6-like isoform X2 [Cucumis melo][more]
XP_004142929.13.5e-5080.15PREDICTED: glutaredoxin-C6-like [Cucumis sativus] >KGN62384.1 Glutaredoxin [Cucu... [more]
BLAST of Carg11929 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G33040.12.7e-3665.19Thioredoxin superfamily protein[more]
AT5G11930.19.5e-2661.62Thioredoxin superfamily protein[more]
AT1G28480.12.0e-1540.71Thioredoxin superfamily protein[more]
AT4G15680.18.3e-1440.78Thioredoxin superfamily protein[more]
AT5G18600.18.3e-1440.38Thioredoxin superfamily protein[more]
BLAST of Carg11929 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8L9S3|GRXC6_ARATH4.8e-3565.19Glutaredoxin-C6 OS=Arabidopsis thaliana OX=3702 GN=GRXC6 PE=2 SV=2[more]
sp|Q29PZ1|GRC10_ARATH1.7e-2461.62Glutaredoxin-C10 OS=Arabidopsis thaliana OX=3702 GN=GRXC10 PE=2 SV=1[more]
sp|Q0DK35|GRXC7_ORYSJ3.4e-1749.50Glutaredoxin-C7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC7 PE=3 SV=1[more]
sp|Q5SMY5|GRXS2_ORYSJ7.7e-1746.85Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS2 PE=2... [more]
sp|Q7G8Y5|GRXC1_ORYSJ1.6e-1443.56Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1[more]
BLAST of Carg11929 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BAG0|A0A1S3BAG0_CUCME1.3e-5080.88glutaredoxin-C6-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487778 PE=4 SV=... [more]
tr|A0A0A0LN11|A0A0A0LN11_CUCSA2.3e-5080.15Glutaredoxin OS=Cucumis sativus OX=3659 GN=Csa_2G351650 PE=4 SV=1[more]
tr|A0A1S4DVC0|A0A1S4DVC0_CUCME2.0e-4680.62glutaredoxin-C6-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487778 PE=4 SV=... [more]
tr|K7KI77|K7KI77_SOYBN1.4e-3666.42Uncharacterized protein OS=Glycine max OX=3847 GN=100791969 PE=4 SV=1[more]
tr|I1JTX4|I1JTX4_SOYBN7.2e-3668.22Uncharacterized protein OS=Glycine max OX=3847 GN=100791969 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO:0015035protein disulfide oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR002109Glutaredoxin
IPR011905GlrX-like_pln_2
IPR014025Glutaredoxin_subgr
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
cellular_component GO:0005575 cellular_component
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg11929-RACarg11929-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014025Glutaredoxin subgroupPRINTSPR00160GLUTAREDOXINcoord: 44..62
score: 35.09
coord: 101..114
score: 31.55
coord: 87..100
score: 26.19
IPR011905Glutaredoxin-like, plant IITIGRFAMTIGR02189TIGR02189coord: 35..130
e-value: 1.3E-30
score: 103.3
NoneNo IPR availableGENE3DG3DSA:3.40.30.10coord: 24..134
e-value: 9.6E-23
score: 81.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR10168GLUTAREDOXINcoord: 3..130
NoneNo IPR availablePANTHERPTHR10168:SF56GLUTAREDOXIN-C6coord: 3..130
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 44..101
e-value: 2.8E-6
score: 27.3
IPR002109GlutaredoxinPROSITEPS51354GLUTAREDOXIN_2coord: 32..130
score: 18.304
IPR036249Thioredoxin-like superfamilySUPERFAMILYSSF52833Thioredoxin-likecoord: 32..129

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg11929Cla022682Watermelon (97103) v1carwmB0172
Carg11929Cla020871Watermelon (97103) v1carwmB0175
Carg11929Csa2G351650Cucumber (Chinese Long) v2carcuB0202
Carg11929Csa4G646150Cucumber (Chinese Long) v2carcuB0204
Carg11929MELO3C016878Melon (DHL92) v3.5.1carmeB0187
Carg11929MELO3C010749Melon (DHL92) v3.5.1carmeB0186
Carg11929ClCG05G017930Watermelon (Charleston Gray)carwcgB0177
Carg11929ClCG08G017070Watermelon (Charleston Gray)carwcgB0178
Carg11929CSPI04G25380Wild cucumber (PI 183967)carcpiB0211
Carg11929CSPI02G17920Wild cucumber (PI 183967)carcpiB0209
Carg11929Cucsa.395070Cucumber (Gy14) v1carcgyB0225
Carg11929CmaCh01G017310Cucurbita maxima (Rimu)carcmaB0251
Carg11929CmaCh05G000900Cucurbita maxima (Rimu)carcmaB0256
Carg11929CmaCh09G003400Cucurbita maxima (Rimu)carcmaB0247
Carg11929CmoCh09G003400Cucurbita moschata (Rifu)carcmoB0255
Carg11929CmoCh05G000980Cucurbita moschata (Rifu)carcmoB0263
Carg11929Lsi04G014200Bottle gourd (USVL1VR-Ls)carlsiB162
Carg11929Lsi08G015880Bottle gourd (USVL1VR-Ls)carlsiB164
Carg11929Cp4.1LG02g05990Cucurbita pepo (Zucchini)carcpeB0265
Carg11929Cp4.1LG11g00260Cucurbita pepo (Zucchini)carcpeB0263
Carg11929CsGy2G017870Cucumber (Gy14) v2carcgybB0195
Carg11929CsGy4G023680Cucumber (Gy14) v2carcgybB0197
Carg11929MELO3C010749.2Melon (DHL92) v3.6.1carmedB0190
Carg11929MELO3C016878.2Melon (DHL92) v3.6.1carmedB0191
Carg11929CsaV3_4G035710Cucumber (Chinese Long) v3carcucB0211
Carg11929CsaV3_2G025520Cucumber (Chinese Long) v3carcucB0209
Carg11929Cla97C05G099230Watermelon (97103) v2carwmbB0189
Carg11929Cla97C08G160770Watermelon (97103) v2carwmbB0190
Carg11929Bhi04G000461Wax gourdcarwgoB0231
Carg11929Bhi09G002575Wax gourdcarwgoB0236
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg11929Carg21732Silver-seed gourdcarcarB216
Carg11929Carg10694Silver-seed gourdcarcarB224
The following block(s) are covering this gene:
GeneOrganismBlock
Carg11929Silver-seed gourdcarcarB223
Carg11929Cucurbita maxima (Rimu)carcmaB0249
Carg11929Cucurbita moschata (Rifu)carcmoB0257
Carg11929Cucurbita pepo (Zucchini)carcpeB0268