Cp4.1LG02g02110 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG02g02110
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUbiquitin domain-containing protein
LocationCp4.1LG02 : 4179276 .. 4182817 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAGGCGCTGTAAACTCAGCTTCGGCTTTTGACTTTTTTGGACTCTCAGCGAAGCTTCTTCGCTCTCTTCCCAAATCTGCCATTCCCTCTTCCATCTCTTCTCATCCTTCCTTCTTTCTCTCTTCTTGTAATTTTGCGCTCTTTAATGGGTTGTGCCGGATCGTCGCAGGCCAAAGGCGACGGTGAGATTGTCCTATTACTTCCCTTTTCATATTCTGATTCTTTTCCGAGATTCTTCTTCTGGGAATTGAACGATTTCATCTTCCTTCTGATGCTTAATTTTGGGATTTTATTGTTTTCGATTCTTCGATGAATTTGGCTTGATCCTACTTTGATGAAAGTGGTTAATCGTGTTGGGTTTATTGTGTGTGGAATGTGAGATGAGAATTTGTGGATTTGAATCGGATTTGTTGTCGAGCGAATTGATTGTTGGCATTTTGGTATTTGTGATTCACTGATGGGATTTTAAGCTTAGAAATGATGATTGGTTTTGTTCTTAGTGTAATTTACGTTTTTATTGCGCTTTTCGTTTTAGGACAACTGGTTTGGAGGTTCTTAAGCATGCAATTGTTGGTATTGAAGAGCTGAGATTGATTAGTTTCTTATTTTGTTTTAGTACTTGATTTGATTGCTATAGCTTTTAATTTGGGCTGCTAATTTAGGGAGGTTAATTGTTTACATCTCATACACCCCTGCTGTTAGATGCTAATTCGGCTGAACCCCTTGTGTTATCTGTGTTTCAAAAGTCGATATGATACTATTTTGCCTTGTGTAATCGAGTTTCAAAAGCCAATATGATACTATTGTGCCTTGTGTAATCGAGTTTCCAAAGCTGATATGATACTATTGTGCCTCGTGTAATCGAGTTTCAAAAGCTGATATGATACTATTGTGCCTCGTGTAATCGAGTTTCAAAAGCTGATATGATACCATTGTGCCTCGTGTAATCAAGTTTCAAAAGCCAATATGATACTGTTGCGGCTTGTGCAATCGAGTTTCATAAGCCAATATGATACTATTGTGCCTCGTGCAATCGAGTTTCATAAGCCAATATGATACTATTGTGCCCTGTGTAACCGAATTTCAAATGCCAATATGATACTATTGCCTCGTGTAATCGATTTTCATAAGCCAATATGATATATTGTGCCTTGCGTAATCGAGTTTCAAAAGCCAATATGATACTATTGTTCAATGAGATGATAGAAATGTTTGGAGAAATTCTCATGTTATTGGGGAATTTAATGTTAATGTTCTTAGCGAGACAGCAAGCACGGTGGCTTACTGTGTTGTAATGTCGATGAGTTCTATCATTGATCATACCGATAATCCACGCACTTCAACTTCTTTTCTGCAATCATAGTTCATCAGCTGCTAATGTCTAGAGTTATAAGGAACTTATGCCATCCTTTTTAGTCACTTGAAGAATTTTTGTAATTCAGGGCCTGTGAAAAAAATTCGGAAGCCTAAAGCTTGGAAGCATCCCCAGCCAATAACAAAGACAGATCTTGCGCGGATGCGTGATGAATTTTGGGATACTGCTCCTCATTATGGTGGCACAAAAGGTATTGCTGTAATCTTGAACTTTTTTTTGGGTCTTGCACAATATTTTTGGTTATAGGTGTTATTAAATTCAAGCTAATTCATTGATTTGGATATCATATTTGATGACCACAACTGAGATTAGTATTACTGAAAGAAGTTCTTAATGCTCATGCAAATATATGATTCAAGGTAATGTGTCAAGAATTCATTGCCTAGTTAATCATGACTAATGAGAAGTAATCTTCTATATTTAGCATGTCATATTTAGCATGTCATAACGGTGAGATCCCACGTCGGTTGGGGAAGAGAACAAAATATTCTTTATAAGGGTGTAGAAACCTCTCTCTATCATACGCTTTTTAAAATCCTGAAGGAAAAGCCCAAAGAGGATAATATCTACTAGCGGTGGGCTTGGGCTATTACATTGATTTTGTATTATGGATCTCTAAAGGTGATCTCTATTTAAGACTATGCTATTGAGTATCTTCCATCACCTCATTTGTTAGAACATGCGTTAGAACATTCGTTAGCCATGATGATCAAATCTGTCAAAAATACTTACTAGTTAGGTGTATTAGTTAGTGAGTTCTTACGTATCTCCGTTTTGAAATGTAGATAGAATCATGCACAAAATCAAAATACATACCTCTAGATAGATTAGAATATGTTTAGCAGAGTGTACATCGTGAGTGGAGTATAACTATCCAATGTATGCCTATCTTCTTTCGTGTATGGATGTCTCTAATGGTAGAACGAAAGTTGGAAAAGCACGACATTACAATATTTTGGCTTTTAAGATGATGAAAGAGATCTTAAATTTTGTAACAGCCTAAGCCCCCGCTAGCAGATATTGTCTTCTTTGGACTTCCCCTCAAGGTTTTTAAAACGTGTCTATTAGGGAGAGGTTTCCTTACCCTTATAAGGAATGTTTCATTCCCCTCTCCAATTAATGTGGATTCTCGCAATCCACCCCCTTTGGGGGACGTTGGCACACCACTAGTTTCTGGCTCTAATACCATTTATAACCGCCGAAACCCACCGCAAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCAAGCTTCTGCTCAACGTTTTAAAAATGCGTATGCTAGGGAGAGGTTTTCTCATGCTTCGTTCTCCTCCCCAACCGATGTGGTATCTCACAAATTCAGCAGAATCCGAAGCTTTTAAGTTCAGTTCAGCTTCAAATTTCGTTTCATACATTTTGCATATGAAGCTGCACATCTTCCTATGCAAAATTCATATGCACATATTGATGTTAAGCATGATTCAAGGTTGTGGAGTAACACATGTACAAAAGAATTCATTAGACCAAAGTTAAGCTCCATCTAATTTGCAAATGGCTGAATACCTGCATGAAAGTAGAGAGAGAAGTTTTAGTTTGATTTGATGAACAGTTGATATTAAGTAGAAGATGAAAGAAGCAAATCCTGAGTGTGTTTAATAACAATAGAAGTTTGTGTATTTTGTGGAGAACAGAGATATGGGATGCACTTCGAGCTGCTGCAGAAGCTGATCTGACACTAGCACAAGCAATAGTGGATAGTGCAGGGGTCATTGTACAAAGTGCTGATTTAACAATTTGTTACGATGAAAGAGGTATTTATTTACATTTACACCCTCCATCCCTCTACTTTGGTTGATTTAGAAAAAACACCCCACAATTTACAAGAATAAAACTGAAATGCAGGTGCAAGATACGAACTGCCCAAGTATGTTTTGAGCGAGCCAACCAACTTGATTTGAAGTAATAAGCAATGAGGAATTGTATGTTTTGCGTGCTAAATTGATTGTAAATCATGTATATTACAACCAACTGTTTCATACCGTCTCTCACATTGATGGATTGGATTGGGCTTATTATTATTATTATTATGCTAACTCACTGTAGCTTCCTTTTGATCGAATCAAGTGTCTATTTGGAATTGTCACTTGTTGATGCCACCCACAAAGGCTGGAATCATTGCTTTACCC

mRNA sequence

AAAAGGCGCTGTAAACTCAGCTTCGGCTTTTGACTTTTTTGGACTCTCAGCGAAGCTTCTTCGCTCTCTTCCCAAATCTGCCATTCCCTCTTCCATCTCTTCTCATCCTTCCTTCTTTCTCTCTTCTTGTAATTTTGCGCTCTTTAATGGGTTGTGCCGGATCGTCGCAGGCCAAAGGCGACGGGCCTGTGAAAAAAATTCGGAAGCCTAAAGCTTGGAAGCATCCCCAGCCAATAACAAAGACAGATCTTGCGCGGATGCGTGATGAATTTTGGGATACTGCTCCTCATTATGGTGGCACAAAAGAGATATGGGATGCACTTCGAGCTGCTGCAGAAGCTGATCTGACACTAGCACAAGCAATAGTGGATAGTGCAGGGGTCATTGTACAAAGTGCTGATTTAACAATTTGTTACGATGAAAGAGGTGCAAGATACGAACTGCCCAAGTATGTTTTGAGCGAGCCAACCAACTTGATTTGAAGTAATAAGCAATGAGGAATTGTATGTTTTGCGTGCTAAATTGATTGTAAATCATGTATATTACAACCAACTGTTTCATACCGTCTCTCACATTGATGGATTGGATTGGGCTTATTATTATTATTATTATGCTAACTCACTGTAGCTTCCTTTTGATCGAATCAAGTGTCTATTTGGAATTGTCACTTGTTGATGCCACCCACAAAGGCTGGAATCATTGCTTTACCC

Coding sequence (CDS)

ATGGGTTGTGCCGGATCGTCGCAGGCCAAAGGCGACGGGCCTGTGAAAAAAATTCGGAAGCCTAAAGCTTGGAAGCATCCCCAGCCAATAACAAAGACAGATCTTGCGCGGATGCGTGATGAATTTTGGGATACTGCTCCTCATTATGGTGGCACAAAAGAGATATGGGATGCACTTCGAGCTGCTGCAGAAGCTGATCTGACACTAGCACAAGCAATAGTGGATAGTGCAGGGGTCATTGTACAAAGTGCTGATTTAACAATTTGTTACGATGAAAGAGGTGCAAGATACGAACTGCCCAAGTATGTTTTGAGCGAGCCAACCAACTTGATTTGA

Protein sequence

MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI
Homology
[Close]
BLAST of Cp4.1LG02g02110 vs. Swiss-Prot
Match: UBTD2_DANRE (Ubiquitin domain-containing protein 2 OS=Danio rerio GN=ubtd2 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.2e-22
Identity = 58/111 (52.25%), Postives = 68/111 (61.26%), Query Frame = 1 

Query: 5   GSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAE 64
           G+  A G     K  KPK WK   P+T   L   RDEFWDTAP + G KEIWDAL+AAA+
Sbjct: 21  GTGVALGRNQPLKREKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAQ 80

Query: 65  A----DLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           A    D  LAQAI+D A + +    LT CYDE G RY+LP Y LS P N+I
Sbjct: 81  AFESNDHELAQAIIDGASITLPHGALTECYDELGNRYQLPVYCLSPPVNMI 130

[Close]
BLAST of Cp4.1LG02g02110 vs. Swiss-Prot
Match: UBTD1_DANRE (Ubiquitin domain-containing protein 1 OS=Danio rerio GN=ubtd1 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 4.9e-22
Identity = 63/128 (49.22%), Postives = 74/128 (57.81%), Query Frame = 1 

Query: 2   GCAGSSQAKGDG--------------PVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAP 61
           GC G  +A+  G              P+KK  KPK WK   P+T+  L   RDEFWDTAP
Sbjct: 3   GCVGRERAETRGRGSRTQRKRGGRNEPLKK-DKPK-WKSDYPMTEGQLRSKRDEFWDTAP 62

Query: 62  HYGGTKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYV 112
            + G KEIWDAL+AAA A    D  LAQAIVD A + +    LT CYDE G RY+LP Y 
Sbjct: 63  AFEGRKEIWDALKAAAVALECSDHELAQAIVDGANITLPHGSLTECYDELGNRYQLPVYC 122

[Close]
BLAST of Cp4.1LG02g02110 vs. Swiss-Prot
Match: UBTD2_BOVIN (Ubiquitin domain-containing protein 2 OS=Bos taurus GN=UBTD2 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-21
Identity = 57/111 (51.35%), Postives = 67/111 (60.36%), Query Frame = 1 

Query: 5   GSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAE 64
           G+  A G     K  KPK WK   P+T   L   RDEFWDTAP + G KEIWDAL+AAA 
Sbjct: 21  GTGVALGRNQPLKKEKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAH 80

Query: 65  A----DLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           A    D  LAQAI+D A + +    LT CYDE G RY+LP Y L+ P N+I
Sbjct: 81  AFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPINMI 130

[Close]
BLAST of Cp4.1LG02g02110 vs. Swiss-Prot
Match: UBTD2_HUMAN (Ubiquitin domain-containing protein 2 OS=Homo sapiens GN=UBTD2 PE=1 SV=2)

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-21
Identity = 57/111 (51.35%), Postives = 67/111 (60.36%), Query Frame = 1 

Query: 5   GSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAE 64
           G+  A G     K  KPK WK   P+T   L   RDEFWDTAP + G KEIWDAL+AAA 
Sbjct: 21  GTGVALGRNQPLKKEKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAH 80

Query: 65  A----DLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           A    D  LAQAI+D A + +    LT CYDE G RY+LP Y L+ P N+I
Sbjct: 81  AFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPINMI 130

[Close]
BLAST of Cp4.1LG02g02110 vs. Swiss-Prot
Match: UBTD2_MOUSE (Ubiquitin domain-containing protein 2 OS=Mus musculus GN=Ubtd2 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-21
Identity = 57/111 (51.35%), Postives = 67/111 (60.36%), Query Frame = 1 

Query: 5   GSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAE 64
           G+  A G     K  KPK WK   P+T   L   RDEFWDTAP + G KEIWDAL+AAA 
Sbjct: 21  GTGVALGRNQPLKKEKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAH 80

Query: 65  A----DLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           A    D  LAQAI+D A + +    LT CYDE G RY+LP Y L+ P N+I
Sbjct: 81  AFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPINMI 130

[Close]
BLAST of Cp4.1LG02g02110 vs. TrEMBL
Match: A0A0A0KZH7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G626080 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 9.8e-54
Identity = 103/111 (92.79%), Postives = 107/111 (96.40%), Query Frame = 1 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGCAGSSQAKGDG VKKIRKPK WK+PQPITKTDL RMRDEFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAG+IVQSADLTICYDERGA+YELPKYVLSEPTNL+
Sbjct: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 111

[Close]
BLAST of Cp4.1LG02g02110 vs. TrEMBL
Match: W9RUD2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002639 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 6.4e-53
Identity = 102/111 (91.89%), Postives = 107/111 (96.40%), Query Frame = 1 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGCAGSSQAKGDG VKKIRKPK WKHPQPITKT L ++R+EFWDTAPHYGGTKEIWDALR
Sbjct: 1   MGCAGSSQAKGDGTVKKIRKPKPWKHPQPITKTQLMQLREEFWDTAPHYGGTKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           AAAEADL+LAQAIVDSAGVIVQSADLTICYDERGA+YELPKYVLSEPTNLI
Sbjct: 61  AAAEADLSLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLI 111

[Close]
BLAST of Cp4.1LG02g02110 vs. TrEMBL
Match: V7BWY8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G080900g PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 9.2e-52
Identity = 99/111 (89.19%), Postives = 106/111 (95.50%), Query Frame = 1 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGCAGSSQ+K DG VKKIRKPK+WKHPQPITKT L ++RDEFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCAGSSQSKPDGAVKKIRKPKSWKHPQPITKTQLTQLRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAGVIVQS+DLT+CYDERGA+YELPKYVLSEPTNLI
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPKYVLSEPTNLI 111

[Close]
BLAST of Cp4.1LG02g02110 vs. TrEMBL
Match: A0A0S3SIM7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G149900 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.6e-51
Identity = 99/111 (89.19%), Postives = 105/111 (94.59%), Query Frame = 1 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGCAGSSQ+K DG VKKIRKPK WKHPQPITKT L ++RDEFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCAGSSQSKPDGAVKKIRKPKPWKHPQPITKTQLTQLRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAGVIVQS+DLT+CYDERGA+YELPKYVLSEPTNLI
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPKYVLSEPTNLI 111

[Close]
BLAST of Cp4.1LG02g02110 vs. TrEMBL
Match: C6SZ79_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.6e-51
Identity = 99/111 (89.19%), Postives = 105/111 (94.59%), Query Frame = 1 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGCAGSSQ+K DG VKKIRKPK WKHPQPITKT L ++RDEFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCAGSSQSKPDGAVKKIRKPKPWKHPQPITKTQLTQLRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAGVIVQS+DLT+CYDERGA+YELPKYVLSEPTNLI
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPKYVLSEPTNLI 111

[Close]
BLAST of Cp4.1LG02g02110 vs. TAIR10
Match: AT1G53400.1 (AT1G53400.1 Ubiquitin domain-containing protein)

HSP 1 Score: 196.8 bits (499), Expect = 6.9e-51
Identity = 90/110 (81.82%), Postives = 102/110 (92.73%), Query Frame = 1 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGCAGS+Q++ DG VKKIRKPK WKH QPITK +L ++R+EFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCAGSTQSQADGSVKKIRKPKPWKHTQPITKAELMKLREEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNL 111
           AAAEAD++LAQAIVDSAGVIVQ+ DLT+CYDERGA+YELPKYVLSEPTNL
Sbjct: 61  AAAEADISLAQAIVDSAGVIVQNTDLTVCYDERGAKYELPKYVLSEPTNL 110

[Close]
BLAST of Cp4.1LG02g02110 vs. TAIR10
Match: AT5G45740.1 (AT5G45740.1 Ubiquitin domain-containing protein)

HSP 1 Score: 175.6 bits (444), Expect = 1.7e-44
Identity = 83/113 (73.45%), Postives = 95/113 (84.07%), Query Frame = 1 

Query: 1   MGCAGSSQAKGDGPVK--KIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDA 60
           MGC GSSQA+ +G  K  KI KPK W H +PIT+  L  MR+EFWDT+PHYGG +EIW+A
Sbjct: 1   MGCIGSSQARNEGGAKRKKIMKPKPWAHTEPITRAQLTNMREEFWDTSPHYGGQREIWEA 60

Query: 61  LRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           LRAAAEADL LAQ IVDSAGVIVQ+ DLT+C+DERGARYELP+YVLSEPTNLI
Sbjct: 61  LRAAAEADLKLAQTIVDSAGVIVQNRDLTLCWDERGARYELPRYVLSEPTNLI 113

[Close]
BLAST of Cp4.1LG02g02110 vs. TAIR10
Match: AT1G16960.1 (AT1G16960.1 Ubiquitin domain-containing protein)

HSP 1 Score: 166.8 bits (421), Expect = 7.7e-42
Identity = 78/112 (69.64%), Postives = 97/112 (86.61%), Query Frame = 1 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGC+ SS+   +G  +KIR+PK WKHPQPI++ +L +MR+EFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCS-SSRTIAEGKKEKIRRPKTWKHPQPISRDELTQMREEFWDTAPHYGGKKEIWDALR 60

Query: 61  AAAEA-DLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           AAAE  DL+LAQ I++SAGVIVQ+ DLTICYDE+G++YELPKYVL +P+NLI
Sbjct: 61  AAAEEDDLSLAQTILESAGVIVQNTDLTICYDEKGSKYELPKYVLRDPSNLI 111

[Close]
BLAST of Cp4.1LG02g02110 vs. NCBI nr
Match: gi|659127531|ref|XP_008463752.1| (PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 217.6 bits (553), Expect = 1.1e-53
Identity = 104/111 (93.69%), Postives = 107/111 (96.40%), Query Frame = 1 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGCAGSSQAKGDG VKKIRKPK WK+PQPITKTDL RMRDEFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAG+IVQSADLTICYDERGA+YELPKYVLSEPTNLI
Sbjct: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLI 111

[Close]
BLAST of Cp4.1LG02g02110 vs. NCBI nr
Match: gi|449456569|ref|XP_004146021.1| (PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis sativus])

HSP 1 Score: 217.2 bits (552), Expect = 1.4e-53
Identity = 103/111 (92.79%), Postives = 107/111 (96.40%), Query Frame = 1 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGCAGSSQAKGDG VKKIRKPK WK+PQPITKTDL RMRDEFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAG+IVQSADLTICYDERGA+YELPKYVLSEPTNL+
Sbjct: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 111

[Close]
BLAST of Cp4.1LG02g02110 vs. NCBI nr
Match: gi|703137829|ref|XP_010106574.1| (hypothetical protein L484_002639 [Morus notabilis])

HSP 1 Score: 214.5 bits (545), Expect = 9.1e-53
Identity = 102/111 (91.89%), Postives = 107/111 (96.40%), Query Frame = 1 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGCAGSSQAKGDG VKKIRKPK WKHPQPITKT L ++R+EFWDTAPHYGGTKEIWDALR
Sbjct: 1   MGCAGSSQAKGDGTVKKIRKPKPWKHPQPITKTQLMQLREEFWDTAPHYGGTKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           AAAEADL+LAQAIVDSAGVIVQSADLTICYDERGA+YELPKYVLSEPTNLI
Sbjct: 61  AAAEADLSLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLI 111

[Close]
BLAST of Cp4.1LG02g02110 vs. NCBI nr
Match: gi|593698182|ref|XP_007149564.1| (hypothetical protein PHAVU_005G080900g [Phaseolus vulgaris])

HSP 1 Score: 210.7 bits (535), Expect = 1.3e-51
Identity = 99/111 (89.19%), Postives = 106/111 (95.50%), Query Frame = 1 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGCAGSSQ+K DG VKKIRKPK+WKHPQPITKT L ++RDEFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCAGSSQSKPDGAVKKIRKPKSWKHPQPITKTQLTQLRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAGVIVQS+DLT+CYDERGA+YELPKYVLSEPTNLI
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPKYVLSEPTNLI 111

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BLAST of Cp4.1LG02g02110 vs. NCBI nr
Match: gi|920699944|gb|KOM43169.1| (hypothetical protein LR48_Vigan05g077300 [Vigna angularis])

HSP 1 Score: 209.9 bits (533), Expect = 2.2e-51
Identity = 99/111 (89.19%), Postives = 105/111 (94.59%), Query Frame = 1 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGCAGSSQ+K DG VKKIRKPK WKHPQPITKT L ++RDEFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCAGSSQSKPDGAVKKIRKPKPWKHPQPITKTQLTQLRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAGVIVQS+DLT+CYDERGA+YELPKYVLSEPTNLI
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPKYVLSEPTNLI 111

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g02110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
UBTD2_DANRE2.2e-2252.25Ubiquitin domain-containing protein 2 OS=Danio rerio GN=ubtd2 PE=2 SV=1[more]
UBTD1_DANRE4.9e-2249.22Ubiquitin domain-containing protein 1 OS=Danio rerio GN=ubtd1 PE=2 SV=1[more]
UBTD2_BOVIN1.1e-2151.35Ubiquitin domain-containing protein 2 OS=Bos taurus GN=UBTD2 PE=2 SV=1[more]
UBTD2_HUMAN1.1e-2151.35Ubiquitin domain-containing protein 2 OS=Homo sapiens GN=UBTD2 PE=1 SV=2[more]
UBTD2_MOUSE1.1e-2151.35Ubiquitin domain-containing protein 2 OS=Mus musculus GN=Ubtd2 PE=2 SV=1[more]
BLAST of Cp4.1LG02g02110 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZH7_CUCSA9.8e-5492.79Uncharacterized protein OS=Cucumis sativus GN=Csa_4G626080 PE=4 SV=1[more]
W9RUD2_9ROSA6.4e-5391.89Uncharacterized protein OS=Morus notabilis GN=L484_002639 PE=4 SV=1[more]
V7BWY8_PHAVU9.2e-5289.19Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G080900g PE=4 SV=1[more]
A0A0S3SIM7_PHAAN1.6e-5189.19Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G149900 PE=... [more]
C6SZ79_SOYBN1.6e-5189.19Putative uncharacterized protein OS=Glycine max PE=2 SV=1[more]
BLAST of Cp4.1LG02g02110 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G53400.16.9e-5181.82 Ubiquitin domain-containing protein[more]
AT5G45740.11.7e-4473.45 Ubiquitin domain-containing protein[more]
AT1G16960.17.7e-4269.64 Ubiquitin domain-containing protein[more]
BLAST of Cp4.1LG02g02110 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659127531|ref|XP_008463752.1|1.1e-5393.69PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis melo][more]
gi|449456569|ref|XP_004146021.1|1.4e-5392.79PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis sativus][more]
gi|703137829|ref|XP_010106574.1|9.1e-5391.89hypothetical protein L484_002639 [Morus notabilis][more]
gi|593698182|ref|XP_007149564.1|1.3e-5189.19hypothetical protein PHAVU_005G080900g [Phaseolus vulgaris][more]
gi|920699944|gb|KOM43169.1|2.2e-5189.19hypothetical protein LR48_Vigan05g077300 [Vigna angularis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0043130ubiquitin binding
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0043130 ubiquitin binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g02110.1Cp4.1LG02g02110.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13609UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATEDcoord: 1..111
score: 2.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG02g02110Cucsa.057720Cucumber (Gy14) v1cgycpeB0073
Cp4.1LG02g02110Cucsa.273680Cucumber (Gy14) v1cgycpeB0721
Cp4.1LG02g02110CmaCh01G012510Cucurbita maxima (Rimu)cmacpeB490
Cp4.1LG02g02110CmoCh01G013080Cucurbita moschata (Rifu)cmocpeB448
Cp4.1LG02g02110Csa4G083480Cucumber (Chinese Long) v2cpecuB570
Cp4.1LG02g02110Csa4G626080Cucumber (Chinese Long) v2cpecuB565
Cp4.1LG02g02110MELO3C025647Melon (DHL92) v3.5.1cpemeB532
Cp4.1LG02g02110MELO3C016122Melon (DHL92) v3.5.1cpemeB547
Cp4.1LG02g02110ClCG07G010180Watermelon (Charleston Gray)cpewcgB527
Cp4.1LG02g02110ClCG11G017380Watermelon (Charleston Gray)cpewcgB488
Cp4.1LG02g02110CSPI04G22780Wild cucumber (PI 183967)cpecpiB567
Cp4.1LG02g02110CSPI04G07920Wild cucumber (PI 183967)cpecpiB572
Cp4.1LG02g02110Lsi04G020030Bottle gourd (USVL1VR-Ls)cpelsiB456
Cp4.1LG02g02110Lsi07G002840Bottle gourd (USVL1VR-Ls)cpelsiB473
Cp4.1LG02g02110MELO3C016122.2Melon (DHL92) v3.6.1cpemedB647
Cp4.1LG02g02110MELO3C025647.2Melon (DHL92) v3.6.1cpemedB631
Cp4.1LG02g02110CsaV3_4G033020Cucumber (Chinese Long) v3cpecucB0702
Cp4.1LG02g02110CsaV3_4G008140Cucumber (Chinese Long) v3cpecucB0707
Cp4.1LG02g02110Bhi09G002880Wax gourdcpewgoB0727
Cp4.1LG02g02110CsGy4G007790Cucumber (Gy14) v2cgybcpeB545
Cp4.1LG02g02110CsGy4G021220Cucumber (Gy14) v2cgybcpeB540
Cp4.1LG02g02110Carg14738Silver-seed gourdcarcpeB0431
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG02g02110Cucurbita pepo (Zucchini)cpecpeB469
Cp4.1LG02g02110Cucurbita maxima (Rimu)cmacpeB055
Cp4.1LG02g02110Cucurbita moschata (Rifu)cmocpeB030
Cp4.1LG02g02110Watermelon (97103) v1cpewmB581