Cucsa.057720 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.057720
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Ubiquitin domain-containing protein
Location	scaffold00614 : 91015 .. 94543 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAACCTTCTTCCCTCTGTTCACTTTTTCCTTCCAAATCTGCCTTTCCTCTTCCTTCTCTTCTCACCCCTTTTCTTCTTTTTCTCTCCAAATTTTGTACTCTTTAATGGGTTGTGCCGGATCGTCGCAGGCCAAAGGCGACGGTGAGTTTATTCTTCAACTTACTTTTCCCATATTCTGATTGTTTTCCGAGATTCTTCTTCTGCCAAATGAAGGATTGTCACCTTTTTTCTCATGTTTAATTCTGGGCTTCTATTCGTTTTCAGTTCTATGATGAATTTGCAGTGACCCCACTTTGATGGAGTGGTTAATCGTGTTTGGGAAAAGTGTTTGTGGAATGCAAGATGGGAATTTGTTAATCTGAATTAGCTTTATTGTTAAGCGAATAGATTGTTGGCATTTTAGTCTGTGTGATTCACTGATTGCCTTTTGAGCTTGTAGTGAATGATTGGTCTTTTCTTGAGTGTAATTTGTGTTTTTATTGCCTTTTCGTTATAAGACATTTGGTTTTGAGCTTCTTTAGCTTGTAATTAATGGTCTTGAAGAGCTGAGATTCATTGGTTTTTTCATTTAGTTGTAGCAATTTATTTGATTGCTGAAGTTTTTAATTGGAAACTCTGTGGTCTTTGGTATTTTTTTCATCATTTTATTGGGATGCCAATTTAGGGCGGTTAGTTCTTTGTATCTCATACACCCCTGCAGTGATTGCTAAACCTCTTTGAGCTGGTTGGCTGGGCACTTTTCTGTTGTTTGTTCATGGGCTCCTTTTTGTTACGCTTATTTTTCTTGTATGCCCTTGTAGTTCTTTGTTTTTCTCAATGGAATTTTAAAAAAGTGTTGGTTCTGCTGATCTCCCTCGTGGAGTTGAGTTTTTAAAGCTGATATGATACTATTATTCAATGAAAGGATTGAAATGCTCATAGTAATTCTCATGGATTTGGGGAATTTGATGTTAACATTCGTCGCCAGCTTCTTATGTTGTAAAGTCGATGTGATTGGTTCTTGCATTGATTATCCATTTATTTTTCTAATGAAATTCAGCCTCTTCAACTTTATTTCTTCAATCATCGTTCTTTAGGTGTTAATCTCAAAAGCTATAAGGAACTTATAGGATCCTCTTAGTCACTTGAAGATTCTTTTTTGATTCAGGGTCTGTGAAAAAAATCCGGAAGCCTAAACCTTGGAAGAATCCCCAGCCAATAACAAAGACAGATCTTGTGCGGATGCGTGATGAATTTTGGGATACTGCACCTCATTATGGTGGCAGAAAAGGTAACACTGTAATGCCAATTTTTTTATCTTGCATAATATTTCTAGTCTTTGTAATTTATTGTTGACCTGATCTTGAACTTTATATCACATTTTATGTAAAAGGTAACTGAGACTAGAATGACTAAAAGAAGTTCTTCAATGCTCATGAAAATTTATGATTCAGAAAGATTGTTACACTGGTTTCGTGCTACTGATTATCTTCAGGATCATTATGTGCAAAGATTTCCCAGTCTAGTTGGTCACGACTCATGAAAAGTAATCCTCTATATTTAGCATCGTGGCCTCTCAAAGAAACAGAAATTTTACTAGAAAGGAAGAGAATTTTGTATTATGGATCATCAAGAATTTAAGAGTGATCTCTATTTAAGACTATGCTGTCGAGCATTTTCCACCACCCTCATTTGTTTGAGCAGTTGTTAGCCAGGCTGATTGAGTCTATCAGAAAATGCTTTCTACTTAGGAGTATTAGTTGGTCAGTTCTTTAATTTAAAGGTTCACTACATATCTTCTAGTTTTGAACTGCAGATAGACAAGGCACATTAAGTCTTAGACCTCTAGTTAAATTACCATATAGTTCAGCAGAATGTACATCCTCAATGCCATTGATCTGTATAAAAATGCTCTGCTTCAATGTGTGCCCGATTCGAGGGTACAACTATGCATGAATGTGACCAATAGTTGAATAAAAGTGAGAAAAACAGGAATGAGTGTGCTAATAAACAACTTATATTACGTAATTGTAGCCATGGAATTGATGAAAGCTGCTTTAATGATAATGTGTAATGTAAACTTTCATTGGCTGGACTAGTGGTAGAAAAGGAGACATAATCTCAATAAATGACTAAGAAGTCATGGTTCAATCTAGGTAGCAATCTACCTAGGAATTAATTTTCTATGGATTTTCTTGACCCTCAAATGTTTAGGGTTAAATGGGTTATCCTATGAATCGTTAGATCAGTCTACATGCGTAAGTTGGTCTGAACATTCACGAATATAAAAAAAATGGTAACGTGTAATGTAAAGTCGTCTTTTTCCTCAGCTTATCTACCCTCATTCACAAAGGAGCTGCTCTTTTGTACTATGTCTCAGATAGAATGTTCTTTTATGATCTATTTCATCAATAAATGAGATGGTTTCTATTTCCTATGAAAGAAAATGGTAATATGTATTGAAGCAAGTAGGAGAAATTATCATTAGCATCCAAGGCTTTAAATTCAGTTTCAAATTTTGTTTCATGCATTTTGCAAATGAAGCTACACCTCATCAATTGGTCGTTAGTGAAGTTAGACATTAGACTATGGCATGAGTTTTTGTTTGTTGTTCATATTCATGTTCACCAGATGATTGTGCTCTGTAGTGTTCATATAAGAGCTGAAACCATTAAAAAGAATCTTATTTTGTGGGCATTAGAGATCTGGGATGCACTTCGAGCTGCTGCAGAAGCTGATTTGACGCTAGCACAAGCAATTGTGGATAGTGCAGGGATCATTGTACAAAGTGCTGATTTAACCATTTGTTATGATGAAAGAGGTATTTATAATCAACCCCACTACTTTTATTAATCCAAAAAGCACCCCACCACTCTTTAGAATATCTTCACTCTACCTTGCATACTTCATTCTTGGATCTAGGATCTAATGCTTGGTTTCTGTGGCATTGGGAAAATTGTAATATTGTTAATATCTTATTCTGATTGGAAAACGCGAAATATTACTATAATTTATTTATTCAGTTAGAATGAAAGTCATGAATATAGATAAGATAAGATATAAGATAGTTCCATTGTCCAAGGAAAAACGAAGTTGTGAGTATTGAGTGTGGCATTAGATGGTTCGATCCAACACTCTTTTTGCATATATTATCAATTGTGATTTAAATTTCCTAATGTTTTTTTTTTTTTTATCCTTTCTCACAAATCAATTGCAGGTGCGAAATACGAATTGCCTAAGTATGTTTTGAGCGAGCCAACAAACTTGGTTTGAAGTAAAATATGAGAGAGATGAGGAAGAGGCTGTGTATCTTTTGTGTTGGAAATTGATTGTAAATCATGTATATTACAATATTACTTCCTTTTCTAATGTTTCTTTTCAGTCTGTACTTTGAAAGATTTCCCATATTGATCAATTGGGGACTTGCGCTAACTTGCTGTAAGTTCGTTTTGATCCAATGAAAGGAATGAAATGTCTATTTGGAGTTGTCTCGGTCTTGTCCTATTGAGTTACAGATATTTATTATCGTAAACATTTAATTCCTACACA

mRNA sequence

CGAACCTTCTTCCCTCTGTTCACTTtttccttccaaatctgcctttcctcttccttctcttctcaccccttttcttctttttctctccAAATTTTGTACTCTTTAATGGGTTGTGCCGGATCGTCGCAGGCCAAAGGCGACGGGTCTGTGAAAAAAATCCGGAAGCCTAAACCTTGGAAGAATCCCCAGCCAATAACAAAGACAGATCTTGTGCGGATGCGTGATGAATTTTGGGATACTGCACCTCATTATGGTGGCAGAAAAGAGATCTGGGATGCACTTCGAGCTGCTGCAGAAGCTGATTTGACGCTAGCACAAGCAATTGTGGATAGTGCAGGGATCATTGTACAAAGTGCTGATTTAACCATTTGTTATGATGAAAGAGGTGCGAAATACGAATTGCCTAAGTATGTTTTGAGCGAGCCAACAAACTTGGTTTGAAGTAAAATATGAGAGAGATGAGGAAGAGGCTGTGTATCTTTTGTGTTGGAAATTGATTGTAAATCATGTATATTACAATATTACTTCCTTTTCTAATGTTTCTTTTCAGTCTGTACTTTGAAAGATTTCCCATATTGATCAATTGGGGACTTGCGCTAACTTGCTGTAAGTTCGTTTTGATCCAATGAAAGGAATGAAATGTCTATTTGGAGTTGTCTCGGTCTTGTCCTATTGAGTTACAGATATTTATTATCGTAAACATTTAATTCCTACACA

Coding sequence (CDS)

ATGGGTTGTGCCGGATCGTCGCAGGCCAAAGGCGACGGGTCTGTGAAAAAAATCCGGAAGCCTAAACCTTGGAAGAATCCCCAGCCAATAACAAAGACAGATCTTGTGCGGATGCGTGATGAATTTTGGGATACTGCACCTCATTATGGTGGCAGAAAAGAGATCTGGGATGCACTTCGAGCTGCTGCAGAAGCTGATTTGACGCTAGCACAAGCAATTGTGGATAGTGCAGGGATCATTGTACAAAGTGCTGATTTAACCATTTGTTATGATGAAAGAGGTGCGAAATACGAATTGCCTAAGTATGTTTTGAGCGAGCCAACAAACTTGGTTTGA

Protein sequence

MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV*

Homology

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BLAST of Cucsa.057720 vs. Swiss-Prot
Match: UBTD1_DANRE (Ubiquitin domain-containing protein 1 OS=Danio rerio GN=ubtd1 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.5e-23
Identity = 59/115 (51.30%), Postives = 73/115 (63.48%), Query Frame = 1


Query: 2   GCAGSSQAKGDGSVKKIRKPKP-WKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 61
           G    +Q K  G  + ++K KP WK+  P+T+  L   RDEFWDTAP + GRKEIWDAL+
Sbjct: 14  GRGSRTQRKRGGRNEPLKKDKPKWKSDYPMTEGQLRSKRDEFWDTAPAFEGRKEIWDALK 73

Query: 62  AAAEA----DLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 112
           AAA A    D  LAQAIVD A I +    LT CYDE G +Y+LP Y L+ P NL+
Sbjct: 74  AAAVALECSDHELAQAIVDGANITLPHGSLTECYDELGNRYQLPVYCLAPPVNLI 128

[Close]

BLAST of Cucsa.057720 vs. Swiss-Prot
Match: UBTD1_XENTR (Ubiquitin domain-containing protein 1 OS=Xenopus tropicalis GN=ubtd1 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.5e-23
Identity = 58/113 (51.33%), Postives = 71/113 (62.83%), Query Frame = 1


Query: 4   AGSSQAKGDGSVKKIRKPKP-WKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALRAA 63
           A   Q K  G  + ++K +P WK+  P+T   L   RDEFWDTAP + GRKEIWDAL+AA
Sbjct: 19  ASGQQRKRAGRNEPLKKERPRWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAA 78

Query: 64  AEA----DLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 112
           A A    D  LAQAIVD A I +    LT CYDE G +Y+LP Y L+ P NL+
Sbjct: 79  AFAVEANDHELAQAIVDGASITLPHGSLTECYDELGTRYQLPVYCLAPPVNLI 131

[Close]

BLAST of Cucsa.057720 vs. Swiss-Prot
Match: UBTD2_DANRE (Ubiquitin domain-containing protein 2 OS=Danio rerio GN=ubtd2 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 5.8e-23
Identity = 58/111 (52.25%), Postives = 70/111 (63.06%), Query Frame = 1


Query: 5   GSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALRAAAE 64
           G+  A G     K  KPK WK+  P+T   L   RDEFWDTAP + GRKEIWDAL+AAA+
Sbjct: 21  GTGVALGRNQPLKREKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAQ 80

Query: 65  A----DLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 112
           A    D  LAQAI+D A I +    LT CYDE G +Y+LP Y LS P N++
Sbjct: 81  AFESNDHELAQAIIDGASITLPHGALTECYDELGNRYQLPVYCLSPPVNMI 130

[Close]

BLAST of Cucsa.057720 vs. Swiss-Prot
Match: UBTD2_BOVIN (Ubiquitin domain-containing protein 2 OS=Bos taurus GN=UBTD2 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.9e-22
Identity = 57/111 (51.35%), Postives = 69/111 (62.16%), Query Frame = 1


Query: 5   GSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALRAAAE 64
           G+  A G     K  KPK WK+  P+T   L   RDEFWDTAP + GRKEIWDAL+AAA 
Sbjct: 21  GTGVALGRNQPLKKEKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAH 80

Query: 65  A----DLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 112
           A    D  LAQAI+D A I +    LT CYDE G +Y+LP Y L+ P N++
Sbjct: 81  AFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPINMI 130

[Close]

BLAST of Cucsa.057720 vs. Swiss-Prot
Match: UBTD2_HUMAN (Ubiquitin domain-containing protein 2 OS=Homo sapiens GN=UBTD2 PE=1 SV=2)

HSP 1 Score: 105.9 bits (263), Expect = 2.9e-22
Identity = 57/111 (51.35%), Postives = 69/111 (62.16%), Query Frame = 1


Query: 5   GSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALRAAAE 64
           G+  A G     K  KPK WK+  P+T   L   RDEFWDTAP + GRKEIWDAL+AAA 
Sbjct: 21  GTGVALGRNQPLKKEKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAH 80

Query: 65  A----DLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 112
           A    D  LAQAI+D A I +    LT CYDE G +Y+LP Y L+ P N++
Sbjct: 81  AFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPINMI 130

[Close]

BLAST of Cucsa.057720 vs. TrEMBL
Match: A0A0A0KZH7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G626080 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.1e-57
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1


Query: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 112
           AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV
Sbjct: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 111

[Close]

BLAST of Cucsa.057720 vs. TrEMBL
Match: A5AGQ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g01000 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 9.9e-54
Identity = 101/111 (90.99%), Postives = 108/111 (97.30%), Query Frame = 1


Query: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQ KGDG+VKKIRKPKPWKNPQP+TKT L++MRDEFWDTAPHYGG+KEIWDALR
Sbjct: 1   MGCAGSSQTKGDGTVKKIRKPKPWKNPQPLTKTQLMQMRDEFWDTAPHYGGQKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 112
           AAAEADLTLAQAIVDSAG+IVQSADLTICYDERGAKYELP YVLSEPTNL+
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELPHYVLSEPTNLI 111

[Close]

BLAST of Cucsa.057720 vs. TrEMBL
Match: W9RUD2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002639 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 4.9e-53
Identity = 100/111 (90.09%), Postives = 109/111 (98.20%), Query Frame = 1


Query: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQAKGDG+VKKIRKPKPWK+PQPITKT L+++R+EFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCAGSSQAKGDGTVKKIRKPKPWKHPQPITKTQLMQLREEFWDTAPHYGGTKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 112
           AAAEADL+LAQAIVDSAG+IVQSADLTICYDERGAKYELPKYVLSEPTNL+
Sbjct: 61  AAAEADLSLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLI 111

[Close]

BLAST of Cucsa.057720 vs. TrEMBL
Match: G7ITE8_MEDTR (Ubiquitin domain protein OS=Medicago truncatula GN=MTR_2g075840 PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 4.9e-53
Identity = 98/111 (88.29%), Postives = 109/111 (98.20%), Query Frame = 1


Query: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQAK DG+VKKIRKPKPWK+PQPITKT L+++RDEFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQAKADGTVKKIRKPKPWKHPQPITKTQLIQLRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 112
           AAAEADL+LAQAIVDSAG+IVQS+DLT+CYDERGAKYELPKYVLSEPTN++
Sbjct: 61  AAAEADLSLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPKYVLSEPTNMI 111

[Close]

BLAST of Cucsa.057720 vs. TrEMBL
Match: A0A061FG33_THECC (Ubiquitin domain-containing protein OS=Theobroma cacao GN=TCM_032011 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 4.9e-53
Identity = 100/111 (90.09%), Postives = 109/111 (98.20%), Query Frame = 1


Query: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGCAGS+ AKGDG+VKKIRKPKPWK+PQPITK+ LV+MR+EFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSTPAKGDGNVKKIRKPKPWKHPQPITKSQLVQMREEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 112
           AAAEADLTLAQAIVDSAG+IVQ+ADLTICYDERGAKYELPKYVLSEPTNL+
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQNADLTICYDERGAKYELPKYVLSEPTNLI 111

[Close]

BLAST of Cucsa.057720 vs. TAIR10
Match: AT1G53400.1 (AT1G53400.1 Ubiquitin domain-containing protein)

HSP 1 Score: 203.4 bits (516), Expect = 7.5e-53
Identity = 92/110 (83.64%), Postives = 106/110 (96.36%), Query Frame = 1


Query: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGCAGS+Q++ DGSVKKIRKPKPWK+ QPITK +L+++R+EFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSTQSQADGSVKKIRKPKPWKHTQPITKAELMKLREEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNL 111
           AAAEAD++LAQAIVDSAG+IVQ+ DLT+CYDERGAKYELPKYVLSEPTNL
Sbjct: 61  AAAEADISLAQAIVDSAGVIVQNTDLTVCYDERGAKYELPKYVLSEPTNL 110

[Close]

BLAST of Cucsa.057720 vs. TAIR10
Match: AT5G45740.1 (AT5G45740.1 Ubiquitin domain-containing protein)

HSP 1 Score: 176.0 bits (445), Expect = 1.3e-44
Identity = 80/113 (70.80%), Postives = 97/113 (85.84%), Query Frame = 1


Query: 1   MGCAGSSQAKGDGSVK--KIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDA 60
           MGC GSSQA+ +G  K  KI KPKPW + +PIT+  L  MR+EFWDT+PHYGG++EIW+A
Sbjct: 1   MGCIGSSQARNEGGAKRKKIMKPKPWAHTEPITRAQLTNMREEFWDTSPHYGGQREIWEA 60

Query: 61  LRAAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 112
           LRAAAEADL LAQ IVDSAG+IVQ+ DLT+C+DERGA+YELP+YVLSEPTNL+
Sbjct: 61  LRAAAEADLKLAQTIVDSAGVIVQNRDLTLCWDERGARYELPRYVLSEPTNLI 113

[Close]

BLAST of Cucsa.057720 vs. TAIR10
Match: AT1G16960.1 (AT1G16960.1 Ubiquitin domain-containing protein)

HSP 1 Score: 165.6 bits (418), Expect = 1.7e-41
Identity = 76/112 (67.86%), Postives = 98/112 (87.50%), Query Frame = 1


Query: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGC+ SS+   +G  +KIR+PK WK+PQPI++ +L +MR+EFWDTAPHYGG+KEIWDALR
Sbjct: 1   MGCS-SSRTIAEGKKEKIRRPKTWKHPQPISRDELTQMREEFWDTAPHYGGKKEIWDALR 60

Query: 61  AAAEA-DLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 112
           AAAE  DL+LAQ I++SAG+IVQ+ DLTICYDE+G+KYELPKYVL +P+NL+
Sbjct: 61  AAAEEDDLSLAQTILESAGVIVQNTDLTICYDEKGSKYELPKYVLRDPSNLI 111

[Close]

BLAST of Cucsa.057720 vs. NCBI nr
Match: gi|449456569|ref|XP_004146021.1| (PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis sativus])

HSP 1 Score: 230.3 bits (586), Expect = 1.6e-57
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1


Query: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 112
           AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV
Sbjct: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 111

[Close]

BLAST of Cucsa.057720 vs. NCBI nr
Match: gi|659127531|ref|XP_008463752.1| (PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 229.9 bits (585), Expect = 2.1e-57
Identity = 110/111 (99.10%), Postives = 111/111 (100.00%), Query Frame = 1


Query: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 112
           AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNL+
Sbjct: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLI 111

[Close]

BLAST of Cucsa.057720 vs. NCBI nr
Match: gi|225461728|ref|XP_002285516.1| (PREDICTED: ubiquitin domain-containing protein 1 [Vitis vinifera])

HSP 1 Score: 217.2 bits (552), Expect = 1.4e-53
Identity = 101/111 (90.99%), Postives = 108/111 (97.30%), Query Frame = 1


Query: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQ KGDG+VKKIRKPKPWKNPQP+TKT L++MRDEFWDTAPHYGG+KEIWDALR
Sbjct: 1   MGCAGSSQTKGDGTVKKIRKPKPWKNPQPLTKTQLMQMRDEFWDTAPHYGGQKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 112
           AAAEADLTLAQAIVDSAG+IVQSADLTICYDERGAKYELP YVLSEPTNL+
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELPHYVLSEPTNLI 111

[Close]

BLAST of Cucsa.057720 vs. NCBI nr
Match: gi|703137829|ref|XP_010106574.1| (hypothetical protein L484_002639 [Morus notabilis])

HSP 1 Score: 214.9 bits (546), Expect = 7.0e-53
Identity = 100/111 (90.09%), Postives = 109/111 (98.20%), Query Frame = 1


Query: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGCAGSSQAKGDG+VKKIRKPKPWK+PQPITKT L+++R+EFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCAGSSQAKGDGTVKKIRKPKPWKHPQPITKTQLMQLREEFWDTAPHYGGTKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 112
           AAAEADL+LAQAIVDSAG+IVQSADLTICYDERGAKYELPKYVLSEPTNL+
Sbjct: 61  AAAEADLSLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLI 111

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BLAST of Cucsa.057720 vs. NCBI nr
Match: gi|590610771|ref|XP_007021914.1| (Ubiquitin domain-containing protein [Theobroma cacao])

HSP 1 Score: 214.9 bits (546), Expect = 7.0e-53
Identity = 100/111 (90.09%), Postives = 109/111 (98.20%), Query Frame = 1


Query: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60
           MGCAGS+ AKGDG+VKKIRKPKPWK+PQPITK+ LV+MR+EFWDTAPHYGGRKEIWDALR
Sbjct: 1   MGCAGSTPAKGDGNVKKIRKPKPWKHPQPITKSQLVQMREEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 112
           AAAEADLTLAQAIVDSAG+IVQ+ADLTICYDERGAKYELPKYVLSEPTNL+
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQNADLTICYDERGAKYELPKYVLSEPTNLI 111

The following BLAST results are available for this feature:

BLAST of Cucsa.057720 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UBTD1_DANRE	1.5e-23	51.30	Ubiquitin domain-containing protein 1 OS=Danio rerio GN=ubtd1 PE=2 SV=1	[more]
UBTD1_XENTR	4.5e-23	51.33	Ubiquitin domain-containing protein 1 OS=Xenopus tropicalis GN=ubtd1 PE=2 SV=1	[more]
UBTD2_DANRE	5.8e-23	52.25	Ubiquitin domain-containing protein 2 OS=Danio rerio GN=ubtd2 PE=2 SV=1	[more]
UBTD2_BOVIN	2.9e-22	51.35	Ubiquitin domain-containing protein 2 OS=Bos taurus GN=UBTD2 PE=2 SV=1	[more]
UBTD2_HUMAN	2.9e-22	51.35	Ubiquitin domain-containing protein 2 OS=Homo sapiens GN=UBTD2 PE=1 SV=2	[more]

BLAST of Cucsa.057720 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZH7_CUCSA	1.1e-57	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G626080 PE=4 SV=1	[more]
A5AGQ0_VITVI	9.9e-54	90.99	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g01000 PE=4 SV=...	[more]
W9RUD2_9ROSA	4.9e-53	90.09	Uncharacterized protein OS=Morus notabilis GN=L484_002639 PE=4 SV=1	[more]
G7ITE8_MEDTR	4.9e-53	88.29	Ubiquitin domain protein OS=Medicago truncatula GN=MTR_2g075840 PE=2 SV=1	[more]
A0A061FG33_THECC	4.9e-53	90.09	Ubiquitin domain-containing protein OS=Theobroma cacao GN=TCM_032011 PE=4 SV=1	[more]

BLAST of Cucsa.057720 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G53400.1	7.5e-53	83.64	Ubiquitin domain-containing protein	[more]
AT5G45740.1	1.3e-44	70.80	Ubiquitin domain-containing protein	[more]
AT1G16960.1	1.7e-41	67.86	Ubiquitin domain-containing protein	[more]

BLAST of Cucsa.057720 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456569\|ref\|XP_004146021.1\|	1.6e-57	100.00	PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis sativus]	[more]
gi\|659127531\|ref\|XP_008463752.1\|	2.1e-57	99.10	PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis melo]	[more]
gi\|225461728\|ref\|XP_002285516.1\|	1.4e-53	90.99	PREDICTED: ubiquitin domain-containing protein 1 [Vitis vinifera]	[more]
gi\|703137829\|ref\|XP_010106574.1\|	7.0e-53	90.09	hypothetical protein L484_002639 [Morus notabilis]	[more]
gi\|590610771\|ref\|XP_007021914.1\|	7.0e-53	90.09	Ubiquitin domain-containing protein [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

Vocabulary: **Molecular Function**
Term	Definition
GO:0043130	ubiquitin binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.057720.1	Cucsa.057720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR13609	UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED	coord: 1..111 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.057720	Csa4G626080	Cucumber (Chinese Long) v2	cgycuB042
Cucsa.057720	MELO3C025647	Melon (DHL92) v3.5.1	cgymeB042
Cucsa.057720	ClCG11G017380	Watermelon (Charleston Gray)	cgywcgB047
Cucsa.057720	CSPI04G22780	Wild cucumber (PI 183967)	cgycpiB043
Cucsa.057720	CmaCh01G012510	Cucurbita maxima (Rimu)	cgycmaB0078
Cucsa.057720	CmoCh01G013080	Cucurbita moschata (Rifu)	cgycmoB0073
Cucsa.057720	Lsi04G020030	Bottle gourd (USVL1VR-Ls)	cgylsiB047
Cucsa.057720	Cp4.1LG02g02110	Cucurbita pepo (Zucchini)	cgycpeB0073
Cucsa.057720	MELO3C025647.2	Melon (DHL92) v3.6.1	cgymedB042
Cucsa.057720	CsaV3_4G033020	Cucumber (Chinese Long) v3	cgycucB045
Cucsa.057720	Cla97C11G223470	Watermelon (97103) v2	cgywmbB046
Cucsa.057720	Bhi09G002880	Wax gourd	cgywgoB048
Cucsa.057720	Carg14738	Silver-seed gourd	carcgyB0363

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.057720	Cucumber (Chinese Long) v2	cgycuB043
Cucsa.057720	Watermelon (97103) v1	cgywmB047