Cp4.1LG01g25920 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g25920
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Zinc finger CCCH domain-containing protein
Location	Cp4.1LG01 : 21023359 .. 21024336 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCCCGCCATTGCCCTCCACTCTTTCTTCAACCGCCGAAGCCTCTCCAAACTCGCCCCAACCGGAGAATCTCTGCAGCCTGCATTTCGTTTCAATGTACCACTCCATTTTCCCTCCATTGTTATCATCATCCTCTCTTTCATTCACGCCCTCCTCCTCCTCCTCCTCCTCCTCCGCTGACGACGACTTCAACAACCCCTGCACCGCCGCTCCCACTTCCACGACCGACGATCTCCTTTTCCAGGCCCGGCTTATATTGGAGCACCGTGAGCTTTGTCAACGCCATGATCTCTGCCTCCGCCGCCTCCGTCAAGTCACCGACGATGTAGATTGTCTTCGACGGGAGAATGCGCAGCTCCAATTGGCCAACGCCGAGCTCATTAAGATTCTTTCGTCGAAGACGGCGGTTGATGATCTCGTTGCGATTCCGAATTCCCATCTCCGATCTCTGATTGGAGAAGGGCAAAACGGGGAGGAAGTTGGTTATGAAATTATAAGTCCGACGAGTGTTATAAGAAAATACAACAACCAGTTGGAGGGAAGGAACAATCGCCGCCGGACCTCTCTTCCCAAAAGCATCTCCGTCCGCTCTGCAGCAGCCTCCGCCGCCGCCGCCGCTCCACTCAACATCCAATCGGTAGAATTTCTCAACTTTTATGTTTATTTGTTTGAAATTATGTATTATTTAAAAAACGTAATTAATAATAATAGTATCGGACAGCGGCGGGTGTGTGGTCCGGTGGAGTTGGAGGTGTACAAGCAGGGGATGGAGAAGACGGAGGTGTGCAAGAAATGGGAGGAGAGCGGGGGGTGCCCTTACGGGGAGCATTGCCGATTTGCCCACGGGGTTGAAGAGCTGCGGCCGGTCATAAGACACCCACGTTACAAGACACAGATTTGTCGGATGGTACTGAGCGGTGAGAAGTGTTGTTATGGTCACCGCTGCCATTTTCGCCACTCTCTCACCCACCAGTAG

mRNA sequence

ATGTGCCCGCCATTGCCCTCCACTCTTTCTTCAACCGCCGAAGCCTCTCCAAACTCGCCCCAACCGGAGAATCTCTGCAGCCTGCATTTCGTTTCAATGTACCACTCCATTTTCCCTCCATTGTTATCATCATCCTCTCTTTCATTCACGCCCTCCTCCTCCTCCTCCTCCTCCTCCGCTGACGACGACTTCAACAACCCCTGCACCGCCGCTCCCACTTCCACGACCGACGATCTCCTTTTCCAGGCCCGGCTTATATTGGAGCACCGTGAGCTTTGTCAACGCCATGATCTCTGCCTCCGCCGCCTCCGTCAAGTCACCGACGATGTAGATTGTCTTCGACGGGAGAATGCGCAGCTCCAATTGGCCAACGCCGAGCTCATTAAGATTCTTTCGTCGAAGACGGCGGTTGATGATCTCGTTGCGATTCCGAATTCCCATCTCCGATCTCTGATTGGAGAAGGGCAAAACGGGGAGGAAGTTGGTTATGAAATTATAAGTCCGACGAGTGTTATAAGAAAATACAACAACCAGTTGGAGGGAAGGAACAATCGCCGCCGGACCTCTCTTCCCAAAAGCATCTCCGTCCGCTCTGCAGCAGCCTCCGCCGCCGCCGCCGCTCCACTCAACATCCAATCGGTAGAATTTCTCAACTTTTATGTTTATTTGTTTGAAATTATGTATTATTTAAAAAACGTAATTAATAATAATAGTATCGGACAGCGGCGGGTGTGTGGTCCGGTGGAGTTGGAGGTGTACAAGCAGGGGATGGAGAAGACGGAGGTGTGCAAGAAATGGGAGGAGAGCGGGGGGTGCCCTTACGGGGAGCATTGCCGATTTGCCCACGGGGTTGAAGAGCTGCGGCCGGTCATAAGACACCCACGTTACAAGACACAGATTTGTCGGATGGTACTGAGCGGTGAGAAGTGTTGTTATGGTCACCGCTGCCATTTTCGCCACTCTCTCACCCACCAGTAG

Coding sequence (CDS)

ATGTGCCCGCCATTGCCCTCCACTCTTTCTTCAACCGCCGAAGCCTCTCCAAACTCGCCCCAACCGGAGAATCTCTGCAGCCTGCATTTCGTTTCAATGTACCACTCCATTTTCCCTCCATTGTTATCATCATCCTCTCTTTCATTCACGCCCTCCTCCTCCTCCTCCTCCTCCTCCGCTGACGACGACTTCAACAACCCCTGCACCGCCGCTCCCACTTCCACGACCGACGATCTCCTTTTCCAGGCCCGGCTTATATTGGAGCACCGTGAGCTTTGTCAACGCCATGATCTCTGCCTCCGCCGCCTCCGTCAAGTCACCGACGATGTAGATTGTCTTCGACGGGAGAATGCGCAGCTCCAATTGGCCAACGCCGAGCTCATTAAGATTCTTTCGTCGAAGACGGCGGTTGATGATCTCGTTGCGATTCCGAATTCCCATCTCCGATCTCTGATTGGAGAAGGGCAAAACGGGGAGGAAGTTGGTTATGAAATTATAAGTCCGACGAGTGTTATAAGAAAATACAACAACCAGTTGGAGGGAAGGAACAATCGCCGCCGGACCTCTCTTCCCAAAAGCATCTCCGTCCGCTCTGCAGCAGCCTCCGCCGCCGCCGCCGCTCCACTCAACATCCAATCGGTAGAATTTCTCAACTTTTATGTTTATTTGTTTGAAATTATGTATTATTTAAAAAACGTAATTAATAATAATAGTATCGGACAGCGGCGGGTGTGTGGTCCGGTGGAGTTGGAGGTGTACAAGCAGGGGATGGAGAAGACGGAGGTGTGCAAGAAATGGGAGGAGAGCGGGGGGTGCCCTTACGGGGAGCATTGCCGATTTGCCCACGGGGTTGAAGAGCTGCGGCCGGTCATAAGACACCCACGTTACAAGACACAGATTTGTCGGATGGTACTGAGCGGTGAGAAGTGTTGTTATGGTCACCGCTGCCATTTTCGCCACTCTCTCACCCACCAGTAG

Protein sequence

MCPPLPSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSSSSSSSSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSVIRKYNNQLEGRNNRRRTSLPKSISVRSAAASAAAAAPLNIQSVEFLNFYVYLFEIMYYLKNVINNNSIGQRRVCGPVELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHQ

Homology

[Close]

BLAST of Cp4.1LG01g25920 vs. Swiss-Prot
Match: C3H14_ARATH (Zinc finger CCCH domain-containing protein 14 OS=Arabidopsis thaliana GN=At1g66810 PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 7.3e-50
Identity = 133/333 (39.94%), Postives = 187/333 (56.16%), Query Frame = 1


Query: 6   PSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSSSSSSSSADDDFN 65
           P  LS  +E S N+   E   +  F S+Y+SIF P     SLS +P SSSS  S  D   
Sbjct: 22  PPPLSPISEQSFNNKHQEEFAA-SFASLYNSIFSP----ESLSPSPPSSSSPPSRVD--- 81

Query: 66  NPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQLQLANA 125
                   +TT+  L QA+LILE+ EL + ++LCL RL+ +  ++D LR EN  L+  N+
Sbjct: 82  --------TTTEHRLLQAKLILEYDELNEHYELCLNRLQSLMTELDSLRHENDSLRFENS 141

Query: 126 ELIKIL----SSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSVIRKYNNQLEG 185
           +L+K++    SS ++V     I N   R  I + ++ +                      
Sbjct: 142 DLLKLIRISTSSSSSVSPPAPIHNRQFRHQISDSRSAK---------------------- 201

Query: 186 RNNRRRTSLPKSISVRSAAASAAAAAPLNIQSVEFLNFYVYLFEIMYYLKNVINNNSIGQ 245
           RNN+ R SLPKSISVRS             Q    +N   + FE      + +++NS+  
Sbjct: 202 RNNQERNSLPKSISVRS-------------QGYLKIN---HGFEASDLQTSQLSSNSVSS 261

Query: 246 -RRVC--------GPVELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVIR 305
            ++VC          +ELEVY+QGM KTE+C KW+E+G C YG++C+FAHG++ELRPVIR
Sbjct: 262 SQKVCVVQTKGEREALELEVYRQGMMKTELCNKWQETGACCYGDNCQFAHGIDELRPVIR 300

Query: 306 HPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHQ 326
           HPRYKT++CRM+++G  C YGHRCHFRHSLT Q
Sbjct: 322 HPRYKTEVCRMMVTGAMCPYGHRCHFRHSLTDQ 300

[Close]

BLAST of Cp4.1LG01g25920 vs. Swiss-Prot
Match: C3H9_ORYSJ (Zinc finger CCCH domain-containing protein 9 OS=Oryza sativa subsp. japonica GN=Os01g0645000 PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.5e-39
Identity = 125/332 (37.65%), Postives = 168/332 (50.60%), Query Frame = 1


Query: 9   LSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSSSSSSSSADDDFNNPC 68
           L+S+    P+       CS  F   +    P  L++S +S +PSSS+S     DD     
Sbjct: 25  LASSPRYLPSGDDALYRCSSPFSPSFGFSSPSPLATS-VSLSPSSSASLVDDGDD----- 84

Query: 69  TAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQLQLANAEL- 128
             A    T   L  ARL L+++E+  R++LCL  L +  ++   LR ENA+L++ N++L 
Sbjct: 85  GGAAADATGQRLQLARLALQYQEVADRYELCLSHLAEAAEEAAALRLENAELRVTNSDLA 144

Query: 129 --IKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSVIRKYNNQLEGRNNR 188
             + +LS K      VA+ +   R  +GE                  +K     + R   
Sbjct: 145 LRLALLSGKHTA--AVAVADEIRRLRLGE------------------QKVAAATKERTPE 204

Query: 189 RRTSLPKSISVRSA----------AASAAAAAPLNIQSVEFLNFYVYLFEIMYYLKNVIN 248
           +   LPKSISVRS           AA+A +AAP                +  Y      +
Sbjct: 205 KLAVLPKSISVRSTSYLKLNQQSQAATATSAAPNRKPRTSSNPTNPPNSQRAY------D 264

Query: 249 NNSIGQRRVCGPV----ELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVI 308
               G  +   P     ELEVY QGM KTE+C KWEE+G CPYG+ C+FAHGV ELRPVI
Sbjct: 265 GGKKGDEQKAQPADSGAELEVYNQGMFKTELCNKWEETGDCPYGDQCQFAHGVTELRPVI 324

Query: 309 RHPRYKTQICRMVLSGEKCCYGHRCHFRHSLT 324
           RHPRYKT +CRMVL+G+ C YGHRCHFRHSLT
Sbjct: 325 RHPRYKTAVCRMVLAGDVCPYGHRCHFRHSLT 324

[Close]

BLAST of Cp4.1LG01g25920 vs. Swiss-Prot
Match: C3H39_ORYSJ (Zinc finger CCCH domain-containing protein 39 OS=Oryza sativa subsp. japonica GN=Os05g0576300 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.0e-39
Identity = 113/293 (38.57%), Postives = 152/293 (51.88%), Query Frame = 1


Query: 48  SFTPSSSSSSSSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVT 107
           SF+  SSSS S  DD       AA    T+  L  A L L+++E+  R +LCL  L    
Sbjct: 66  SFSHCSSSSDSVVDDGDGAGAAAA----TEHRLHLAHLALQYQEMANRFELCLSHLADAA 125

Query: 108 DDVDCLRRENAQLQLANAELI-KILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEII 167
           D+   LR+ENA+L++AN +L  +I          +A+     R  + + Q    +     
Sbjct: 126 DEAAALRQENAELRVANNDLACRIAKFGGRQSSAIALAGDLRRLRLPKEQTVPALPPPPQ 185

Query: 168 SPTSVIRKYNNQLEGRNNRRRTSLPKSISVRSAA-------ASAAAAAPLNIQSVE-FLN 227
           SP + +       E     ++  LPKSIS+RS              + P+N+ S   F+ 
Sbjct: 186 SPPAALMNPVAVPE-----KQAVLPKSISIRSTGYQKLNQGGKHRVSKPVNVGSQRVFVG 245

Query: 228 FYVYLFEIMYYLKNVINNNSIGQRRV--------CGPVELEVYKQGMEKTEVCKKWEESG 287
                          I+    G+ +V         G +E EVY QGM KTE+C KWEE+G
Sbjct: 246 ---------------IDGAEGGEHKVGVKKEEPPMGGLEFEVYNQGMFKTELCNKWEETG 305

Query: 288 GCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLT 324
            CPYG+ C+FAHGV ELRPVIRHPRYKTQ+CRMVL+G  C YGHRCHFRHS+T
Sbjct: 306 ACPYGDQCQFAHGVAELRPVIRHPRYKTQVCRMVLAGGVCPYGHRCHFRHSIT 334

[Close]

BLAST of Cp4.1LG01g25920 vs. Swiss-Prot
Match: C3H15_ARATH (Zinc finger CCCH domain-containing protein 15 OS=Arabidopsis thaliana GN=At1g68200 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.5e-36
Identity = 106/295 (35.93%), Postives = 159/295 (53.90%), Query Frame = 1


Query: 48  SFTPSSSSSSSSADDDFNNPCTAAPTSTTDDLLFQARLILEHRE-LCQRHDLCLRRLRQV 107
           S++ SS+ +SSS           + +  +D L    R I++ R+ +  R  LC  RL + 
Sbjct: 9   SYSGSSAGNSSSGG-------VVSSSLYSDQLYKSTRNIMQQRQDMVNREALCYTRLHEA 68

Query: 108 TDDVDCLRRENAQLQLANAELIKILSS--KTAVDDLV--AIPNSHLRSLIGEGQNGEEVG 167
           + + + LR EN +L+  N  L   L+S  ++++ +      P   L +L   G + +EV 
Sbjct: 69  SLEAEALRLENTELRSMNLRLKNELNSLIRSSIQNRFDHRSPLRMLSNLSIGGNDADEVE 128

Query: 168 YE--IISPTSVIRKYNNQLEGRNNRRRTSLPKSISVRS----------AAASAAAAAPLN 227
            +   ++   V  K    +    +  R+SLPKSISVRS            A+A +  P  
Sbjct: 129 NQNRTVNRDDVNDKSPTSVMENEDLNRSSLPKSISVRSNGYSKASQGGGGAAAQSGKPRG 188

Query: 228 IQSVEFLNFYVYLFEIMYYLKNVINNNSIGQRRVCGPVELEVYKQGMEKTEVCKKWEESG 287
             +       V   + +Y        +   +      +E+EVY QGM KTE+C KW+E+G
Sbjct: 189 TVTKPGTCGQVSTTQKVYVRGGGKKEDQEEE------IEVEVYNQGMTKTELCNKWQETG 248

Query: 288 GCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHQ 326
            CPYG+HC+FAHG++ELRPVIRHPRYKT++CRMVL+G+ C YGHRCHFRHSL+ Q
Sbjct: 249 TCPYGDHCQFAHGIKELRPVIRHPRYKTEVCRMVLAGDNCPYGHRCHFRHSLSEQ 290

[Close]

BLAST of Cp4.1LG01g25920 vs. Swiss-Prot
Match: C3H21_ORYSJ (Putative zinc finger CCCH domain-containing protein 21 OS=Oryza sativa subsp. japonica GN=Os03g0301500 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.0e-24
Identity = 94/300 (31.33%), Postives = 137/300 (45.67%), Query Frame = 1


Query: 38  FPPLLSSSSLS--FTPSSSSSSSSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQR 97
           FP L  +SSL    T  SS  S      +++P  A+     +  + +A ++L  R + +R
Sbjct: 181 FPSLPWASSLEKPLTSPSSCVSDGRSGGYSSPLGASAERERE--VREAEMLL--RAIAER 240

Query: 98  HDLCLRRLRQVTDDVDCLRRENAQLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGEG 157
           +D C  RLR    ++  L RE  +L                     A  N HL  L+ E 
Sbjct: 241 YDDCFLRLRDAAAELSDLHRERLRL---------------------AAENLHLSLLLEEL 300

Query: 158 QNGEEVGYEIISPTSVIRKYNNQLEGRNNRRRTSLPKSISVRSAAASA-----AAAAPLN 217
           ++ +      ++P  +           +   +   PKSIS+RS    +       A P  
Sbjct: 301 ESEQRKQASAMAPPKL---------EEDEAAQGGAPKSISIRSPGYLSQKPPQGQARPQR 360

Query: 218 IQ-------SVEFLNFYVYLFEIMYYLKNVI--NNNSIGQRRVCGPVELEVYKQGMEKTE 277
           ++        +   N  +++       K      +    + +  G VE+E Y+QG  KTE
Sbjct: 361 LRVRASQAMEISHPNCLIFVMGNQCSPKEAAAAGDEEDEEDKGGGEVEVEAYRQGAAKTE 420

Query: 278 VCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHS 322
           +C KWE  G CPYG  CRFAHG++ELRPVIRHPRYKT  C+M  +   C YGHRCHFRHS
Sbjct: 421 LCNKWER-GACPYGARCRFAHGLQELRPVIRHPRYKTLPCQMFAAASGCPYGHRCHFRHS 445

[Close]

BLAST of Cp4.1LG01g25920 vs. TrEMBL
Match: A0A0A0LQS7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404980 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 2.0e-102
Identity = 212/327 (64.83%), Postives = 250/327 (76.45%), Query Frame = 1


Query: 1   MCPPL-PSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSSSSSSSS 60
           MCPPL PSTLS+T E S  + + E+    HF SMYHSIFPPLLSSSSL  + S + S SS
Sbjct: 35  MCPPLLPSTLSTTTELS--AVEYEDF-GHHFASMYHSIFPPLLSSSSLPNSLSFTPSPSS 94

Query: 61  ADDDFNNPCTA-APTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENA 120
           ADDD NN CT  A TSTTDDLLFQARLILE+R L  RHDLCLRRLRQV +D D LR+ENA
Sbjct: 95  ADDDHNNHCTTPAATSTTDDLLFQARLILENRHLHHRHDLCLRRLRQVAEDADYLRQENA 154

Query: 121 QLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSVIRKYNNQ 180
           QL+LANAEL+K++SSKTAVDDLV+IPNSHLR+LIG GQ+G+E+GY++ISPTSVI KYN+Q
Sbjct: 155 QLRLANAELVKVISSKTAVDDLVSIPNSHLRTLIGGGQSGDEIGYDMISPTSVIGKYNDQ 214

Query: 181 LEGRNNRRRTSLPKSISVRSAAASAAAAAPLNIQSVEFLNFYVYLFEIMYYLKNVINNNS 240
            +GRNN RR SLP+SISVRSAA  AA++  LNI+S                  +   ++ 
Sbjct: 215 FDGRNNLRRNSLPRSISVRSAA--AASSVQLNIKSRG---------------ASTPVSDG 274

Query: 241 IGQRRVCGPVELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKT 300
             ++R     E EVY QG  KTE+C KW+E G CPYG HCRFAHG+EELRPV+RHPRYKT
Sbjct: 275 GSRKREEEATEFEVYNQGTTKTELCNKWQEIGDCPYGNHCRFAHGLEELRPVMRHPRYKT 334

Query: 301 QICRMVLSGEKCCYGHRCHFRHSLTHQ 326
           Q+CRMVL+GEKC YGHRCHFRHSL+ Q
Sbjct: 335 QMCRMVLAGEKCPYGHRCHFRHSLSEQ 341

[Close]

BLAST of Cp4.1LG01g25920 vs. TrEMBL
Match: W9S101_9ROSA (Zinc finger CCCH domain-containing protein 14 OS=Morus notabilis GN=L484_027093 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 7.6e-54
Identity = 157/348 (45.11%), Postives = 195/348 (56.03%), Query Frame = 1


Query: 3   PPLPSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSS--SSLSFTPSSSSSSSSA 62
           PPL     +    S NSP+  +     F SMY SIFP   S   SSLS TPS+ SSS+  
Sbjct: 21  PPLAMAQGTRQNFSENSPEARDF-GAEFFSMYRSIFPAKSSPLPSSLSLTPSTRSSSAGG 80

Query: 63  DDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQL 122
                        STT+  L QARLILEH++L  ++DL    LR +  ++D LRRENA+L
Sbjct: 81  GGGCYED-----ESTTEHRLIQARLILEHQQLNDQYDLFQTHLRNLNKEIDFLRRENAEL 140

Query: 123 QLANAELIKILSSKTAVDDLV----AIPNSHL----RSLIGEGQNGEEVGYEI-----IS 182
           +  N EL+KILSS  A    +    A PN  L    R L   G    + G+ +     IS
Sbjct: 141 RSVNTELLKILSSPAAFQGFLLSSGAYPNQSLLDSFRRLDIGGVLAPDHGHGVEDVSDIS 200

Query: 183 PTSVIRKYNNQLEGRNNRRRTSLPKSISVRSAAASAAAAAPLNIQSVEFLNFYVYLFEIM 242
           PTSV+    N++E R +  R SLPKSISVRS     A +      S E            
Sbjct: 201 PTSVME--TNRIE-RPSAERVSLPKSISVRSTGYQKAISHSPGNSSREGPG---RSSNRP 260

Query: 243 YYLKNVINNNSIGQR----------RVCGPVELEVYKQGMEKTEVCKKWEESGGCPYGEH 302
             + N I + +  QR             G +EL+VY QGM KTE+C KW+++G CPYGEH
Sbjct: 261 RSVPNPIASRTETQRVYVPGVGEKEEESGGLELDVYNQGMFKTELCNKWQQTGACPYGEH 320

Query: 303 CRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHQ 326
           C+FAHG+ ELRPVIRHPRYKT+ICRMVLSGE+C YGHRCHFRHSLT Q
Sbjct: 321 CQFAHGITELRPVIRHPRYKTEICRMVLSGERCPYGHRCHFRHSLTEQ 356

[Close]

BLAST of Cp4.1LG01g25920 vs. TrEMBL
Match: B9SQ02_RICCO (Zinc finger protein, putative OS=Ricinus communis GN=RCOM_0467770 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 8.4e-53
Identity = 138/311 (44.37%), Postives = 182/311 (58.52%), Query Frame = 1


Query: 30  FVSMYHSIFPP----LLSSSSLSFTPSSSSSSSSADDDFNNPCTAAPTSTTDDLLFQARL 89
           F ++YHSIFPP    L SS S S TPSS+SS+S+ DD             T+  L QA L
Sbjct: 43  FTTLYHSIFPPKPPALPSSLSFSLTPSSTSSASATDD-------------TEYRLQQASL 102

Query: 90  ILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQLQLANAELIKILSSKTAVDDLVAIPN 149
           ILE++ELC  +DLCL RL+ ++ ++D LR+ENA L+L N +L+++LS          I +
Sbjct: 103 ILEYQELCDHYDLCLSRLQSLSKEIDSLRQENADLRLVNNDLLRLLS----------ISS 162

Query: 150 SHLRSLIGEGQNGEEVGYEIISPTSVIRKYNNQLEGRNNRRRTSLPKSISVRSA------ 209
            H R  I E                      ++ E RNN  R  LPKSISVRS+      
Sbjct: 163 IHNRREIAE---------------------PSRFERRNNTERVMLPKSISVRSSGYLKLN 222

Query: 210 -AASAAAAAPLNIQSVEFLNFYVYLFEIMYYLKNVI----NNNSIGQRRVCGPVELEVYK 269
            AAS+++  PL    +   N    +   ++  + V          G +R    VE+EVY 
Sbjct: 223 PAASSSSTRPL----LASHNLDQLISGSVHQQQRVRVAGGGGGGGGNKREEAAVEMEVYN 282

Query: 270 QGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGH 326
           QGM KTE+C KW+E+G CPYG+HC+FAHG+ ELRPVIRHPRYKTQ+CRMV++GE C YGH
Sbjct: 283 QGMWKTELCNKWQETGMCPYGDHCQFAHGITELRPVIRHPRYKTQVCRMVVAGEVCPYGH 305

[Close]

BLAST of Cp4.1LG01g25920 vs. TrEMBL
Match: A0A059BTI7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02796 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.1e-51
Identity = 140/339 (41.30%), Postives = 190/339 (56.05%), Query Frame = 1


Query: 3   PPLPSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLS-SSSLSFTPSSSSSSSSAD 62
           PP P    S   A  +S       + +F ++YHSIFPP    SSS   TPS  SS+SS  
Sbjct: 26  PPPPHAPHSPPPAQSSSSPLNQQFAANFSALYHSIFPPNSPHSSSALITPSLCSSASS-- 85

Query: 63  DDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQLQ 122
            D N   TA  T   +  L QARL+LE+++L   +DLC   L  +T+++D LRRENA+L+
Sbjct: 86  -DSNQNATARSTIAIEHRLNQARLVLEYQQLRDHYDLCRAHLNDLTEEIDSLRRENARLR 145

Query: 123 LANAELIKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSVIRKYNNQLEG 182
           LAN+EL+K+L+  +            L      G +         SPTSV+ +   +   
Sbjct: 146 LANSELVKLLNLPSQGTLQSCFRRLGLSDTNATGSDFSSEDVCSYSPTSVMDQSGYET-- 205

Query: 183 RNNRRRTSLPKSISVRS---------AAASAAAAAPLN------IQSVEFLNFYVYLFEI 242
            +N  R  LPKSISVRS         AA+++ ++ P++       Q    +   VY+   
Sbjct: 206 -SNPERVWLPKSISVRSSGYLKLNQPAASNSRSSRPVSQLRSPRAQEPPKVQQRVYV--- 265

Query: 243 MYYLKNVINNNSIGQRRVCGPVELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEE 302
                        G ++    +E EVY QGM KTE+C KW+E+G CPYG+HC+FAHG+ E
Sbjct: 266 ------------PGGKKEQEALEFEVYSQGMFKTELCNKWQETGACPYGDHCQFAHGIAE 325

Query: 303 LRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHQ 326
           LRPVIRHPRYKT++CRMVL+G+ C YGHRCHFRHSLT Q
Sbjct: 326 LRPVIRHPRYKTEVCRMVLAGDMCPYGHRCHFRHSLTEQ 343

[Close]

BLAST of Cp4.1LG01g25920 vs. TrEMBL
Match: A0A067KL69_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13051 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 3.9e-50
Identity = 146/344 (42.44%), Postives = 193/344 (56.10%), Query Frame = 1


Query: 3   PPLPSTLSSTAEASP---NSPQPENLCSLH---FVSMYHSIFPP----LLSSSSLSFTPS 62
           PPL     S A  SP   +SP  +N        F ++YHSIFPP    L SS S S TPS
Sbjct: 7   PPLDQITVSPASKSPPLPSSPPSDNRTQQFASTFTTLYHSIFPPKPSPLPSSLSFSITPS 66

Query: 63  SSSSSSSAD-DDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVD 122
           +SS SS+A  DDF+           +  L QARLILE++ELC  ++L L RL+ +T +++
Sbjct: 67  TSSPSSAATTDDFD----------IEHQLHQARLILEYQELCDHYELSLDRLQALTTEIE 126

Query: 123 CLRRENAQLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSV 182
            LR+EN  L+LAN +L+K+LS  +      A   S   S             E++ P+  
Sbjct: 127 SLRQENTNLRLANNDLVKLLSLSSQ-----AAIQSRFNSR------------EMVEPSRF 186

Query: 183 IRKYNNQLEGRNNRRRTSLPKSISVRSAA---ASAAAAAPLNIQSVEFLNFYVYLFEIMY 242
            R+         N  R +LPKSISVRS+     + A  A    QS       V      +
Sbjct: 187 ERR---------NGERVTLPKSISVRSSGYLKLNRADNASNGDQSSTSTRSRVASHHDQF 246

Query: 243 YLKNVINNNSIGQRRVCGP---------VELEVYKQGMEKTEVCKKWEESGGCPYGEHCR 302
                   + + Q+RVC P         VELEV+ QGM KTE+C KW+E+G CPYG++C+
Sbjct: 247 V-------SGLVQQRVCVPGGGKGDNPAVELEVFNQGMWKTELCNKWQETGACPYGDNCQ 306

Query: 303 FAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLT 324
           FAHG++ELRPVIRHPRYKTQ+CRMV++G+ C YGHRCHFRHSLT
Sbjct: 307 FAHGIKELRPVIRHPRYKTQVCRMVVAGQACPYGHRCHFRHSLT 307

[Close]

BLAST of Cp4.1LG01g25920 vs. TAIR10
Match: AT1G66810.1 (AT1G66810.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 199.1 bits (505), Expect = 4.1e-51
Identity = 133/333 (39.94%), Postives = 187/333 (56.16%), Query Frame = 1


Query: 6   PSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSSSSSSSSADDDFN 65
           P  LS  +E S N+   E   +  F S+Y+SIF P     SLS +P SSSS  S  D   
Sbjct: 22  PPPLSPISEQSFNNKHQEEFAA-SFASLYNSIFSP----ESLSPSPPSSSSPPSRVD--- 81

Query: 66  NPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQLQLANA 125
                   +TT+  L QA+LILE+ EL + ++LCL RL+ +  ++D LR EN  L+  N+
Sbjct: 82  --------TTTEHRLLQAKLILEYDELNEHYELCLNRLQSLMTELDSLRHENDSLRFENS 141

Query: 126 ELIKIL----SSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSVIRKYNNQLEG 185
           +L+K++    SS ++V     I N   R  I + ++ +                      
Sbjct: 142 DLLKLIRISTSSSSSVSPPAPIHNRQFRHQISDSRSAK---------------------- 201

Query: 186 RNNRRRTSLPKSISVRSAAASAAAAAPLNIQSVEFLNFYVYLFEIMYYLKNVINNNSIGQ 245
           RNN+ R SLPKSISVRS             Q    +N   + FE      + +++NS+  
Sbjct: 202 RNNQERNSLPKSISVRS-------------QGYLKIN---HGFEASDLQTSQLSSNSVSS 261

Query: 246 -RRVC--------GPVELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVIR 305
            ++VC          +ELEVY+QGM KTE+C KW+E+G C YG++C+FAHG++ELRPVIR
Sbjct: 262 SQKVCVVQTKGEREALELEVYRQGMMKTELCNKWQETGACCYGDNCQFAHGIDELRPVIR 300

Query: 306 HPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHQ 326
           HPRYKT++CRM+++G  C YGHRCHFRHSLT Q
Sbjct: 322 HPRYKTEVCRMMVTGAMCPYGHRCHFRHSLTDQ 300

[Close]

BLAST of Cp4.1LG01g25920 vs. TAIR10
Match: AT1G68200.1 (AT1G68200.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 153.7 bits (387), Expect = 2.0e-37
Identity = 106/295 (35.93%), Postives = 159/295 (53.90%), Query Frame = 1


Query: 48  SFTPSSSSSSSSADDDFNNPCTAAPTSTTDDLLFQARLILEHRE-LCQRHDLCLRRLRQV 107
           S++ SS+ +SSS           + +  +D L    R I++ R+ +  R  LC  RL + 
Sbjct: 9   SYSGSSAGNSSSGG-------VVSSSLYSDQLYKSTRNIMQQRQDMVNREALCYTRLHEA 68

Query: 108 TDDVDCLRRENAQLQLANAELIKILSS--KTAVDDLV--AIPNSHLRSLIGEGQNGEEVG 167
           + + + LR EN +L+  N  L   L+S  ++++ +      P   L +L   G + +EV 
Sbjct: 69  SLEAEALRLENTELRSMNLRLKNELNSLIRSSIQNRFDHRSPLRMLSNLSIGGNDADEVE 128

Query: 168 YE--IISPTSVIRKYNNQLEGRNNRRRTSLPKSISVRS----------AAASAAAAAPLN 227
            +   ++   V  K    +    +  R+SLPKSISVRS            A+A +  P  
Sbjct: 129 NQNRTVNRDDVNDKSPTSVMENEDLNRSSLPKSISVRSNGYSKASQGGGGAAAQSGKPRG 188

Query: 228 IQSVEFLNFYVYLFEIMYYLKNVINNNSIGQRRVCGPVELEVYKQGMEKTEVCKKWEESG 287
             +       V   + +Y        +   +      +E+EVY QGM KTE+C KW+E+G
Sbjct: 189 TVTKPGTCGQVSTTQKVYVRGGGKKEDQEEE------IEVEVYNQGMTKTELCNKWQETG 248

Query: 288 GCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHQ 326
            CPYG+HC+FAHG++ELRPVIRHPRYKT++CRMVL+G+ C YGHRCHFRHSL+ Q
Sbjct: 249 TCPYGDHCQFAHGIKELRPVIRHPRYKTEVCRMVLAGDNCPYGHRCHFRHSLSEQ 290

[Close]

BLAST of Cp4.1LG01g25920 vs. TAIR10
Match: AT2G35430.1 (AT2G35430.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 49.7 bits (117), Expect = 4.0e-06
Identity = 17/29 (58.62%), Postives = 21/29 (72.41%), Query Frame = 1


Query: 259 KTEVCKKWEESGGCPYGEHCRFAHGVEEL 288
           KT +C KW+ +G CP+G HC FAHG  EL
Sbjct: 145 KTRICNKWQTTGYCPFGSHCHFAHGPSEL 173

[Close]

BLAST of Cp4.1LG01g25920 vs. TAIR10
Match: AT1G32360.1 (AT1G32360.1 Zinc finger (CCCH-type) family protein)

HSP 1 Score: 48.9 bits (115), Expect = 6.8e-06
Identity = 18/38 (47.37%), Postives = 24/38 (63.16%), Query Frame = 1


Query: 250 LEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEEL 288
           +++ K    KT +C KWE +G CP+G  C FAHG  EL
Sbjct: 253 IQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAEL 290

[Close]

BLAST of Cp4.1LG01g25920 vs. NCBI nr
Match: gi|449442060|ref|XP_004138800.1| (PREDICTED: zinc finger CCCH domain-containing protein 14-like [Cucumis sativus])

HSP 1 Score: 380.6 bits (976), Expect = 2.8e-102
Identity = 212/327 (64.83%), Postives = 250/327 (76.45%), Query Frame = 1


Query: 1   MCPPL-PSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSSSSSSSS 60
           MCPPL PSTLS+T E S  + + E+    HF SMYHSIFPPLLSSSSL  + S + S SS
Sbjct: 5   MCPPLLPSTLSTTTELS--AVEYEDF-GHHFASMYHSIFPPLLSSSSLPNSLSFTPSPSS 64

Query: 61  ADDDFNNPCTA-APTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENA 120
           ADDD NN CT  A TSTTDDLLFQARLILE+R L  RHDLCLRRLRQV +D D LR+ENA
Sbjct: 65  ADDDHNNHCTTPAATSTTDDLLFQARLILENRHLHHRHDLCLRRLRQVAEDADYLRQENA 124

Query: 121 QLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSVIRKYNNQ 180
           QL+LANAEL+K++SSKTAVDDLV+IPNSHLR+LIG GQ+G+E+GY++ISPTSVI KYN+Q
Sbjct: 125 QLRLANAELVKVISSKTAVDDLVSIPNSHLRTLIGGGQSGDEIGYDMISPTSVIGKYNDQ 184

Query: 181 LEGRNNRRRTSLPKSISVRSAAASAAAAAPLNIQSVEFLNFYVYLFEIMYYLKNVINNNS 240
            +GRNN RR SLP+SISVRSAA  AA++  LNI+S                  +   ++ 
Sbjct: 185 FDGRNNLRRNSLPRSISVRSAA--AASSVQLNIKSRG---------------ASTPVSDG 244

Query: 241 IGQRRVCGPVELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKT 300
             ++R     E EVY QG  KTE+C KW+E G CPYG HCRFAHG+EELRPV+RHPRYKT
Sbjct: 245 GSRKREEEATEFEVYNQGTTKTELCNKWQEIGDCPYGNHCRFAHGLEELRPVMRHPRYKT 304

Query: 301 QICRMVLSGEKCCYGHRCHFRHSLTHQ 326
           Q+CRMVL+GEKC YGHRCHFRHSL+ Q
Sbjct: 305 QMCRMVLAGEKCPYGHRCHFRHSLSEQ 311

[Close]

BLAST of Cp4.1LG01g25920 vs. NCBI nr
Match: gi|700208028|gb|KGN63147.1| (hypothetical protein Csa_2G404980 [Cucumis sativus])

HSP 1 Score: 380.6 bits (976), Expect = 2.8e-102
Identity = 212/327 (64.83%), Postives = 250/327 (76.45%), Query Frame = 1


Query: 1   MCPPL-PSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSSSSSSSS 60
           MCPPL PSTLS+T E S  + + E+    HF SMYHSIFPPLLSSSSL  + S + S SS
Sbjct: 35  MCPPLLPSTLSTTTELS--AVEYEDF-GHHFASMYHSIFPPLLSSSSLPNSLSFTPSPSS 94

Query: 61  ADDDFNNPCTA-APTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENA 120
           ADDD NN CT  A TSTTDDLLFQARLILE+R L  RHDLCLRRLRQV +D D LR+ENA
Sbjct: 95  ADDDHNNHCTTPAATSTTDDLLFQARLILENRHLHHRHDLCLRRLRQVAEDADYLRQENA 154

Query: 121 QLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSVIRKYNNQ 180
           QL+LANAEL+K++SSKTAVDDLV+IPNSHLR+LIG GQ+G+E+GY++ISPTSVI KYN+Q
Sbjct: 155 QLRLANAELVKVISSKTAVDDLVSIPNSHLRTLIGGGQSGDEIGYDMISPTSVIGKYNDQ 214

Query: 181 LEGRNNRRRTSLPKSISVRSAAASAAAAAPLNIQSVEFLNFYVYLFEIMYYLKNVINNNS 240
            +GRNN RR SLP+SISVRSAA  AA++  LNI+S                  +   ++ 
Sbjct: 215 FDGRNNLRRNSLPRSISVRSAA--AASSVQLNIKSRG---------------ASTPVSDG 274

Query: 241 IGQRRVCGPVELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKT 300
             ++R     E EVY QG  KTE+C KW+E G CPYG HCRFAHG+EELRPV+RHPRYKT
Sbjct: 275 GSRKREEEATEFEVYNQGTTKTELCNKWQEIGDCPYGNHCRFAHGLEELRPVMRHPRYKT 334

Query: 301 QICRMVLSGEKCCYGHRCHFRHSLTHQ 326
           Q+CRMVL+GEKC YGHRCHFRHSL+ Q
Sbjct: 335 QMCRMVLAGEKCPYGHRCHFRHSLSEQ 341

[Close]

BLAST of Cp4.1LG01g25920 vs. NCBI nr
Match: gi|659081374|ref|XP_008441301.1| (PREDICTED: zinc finger CCCH domain-containing protein 14-like [Cucumis melo])

HSP 1 Score: 378.6 bits (971), Expect = 1.1e-101
Identity = 215/330 (65.15%), Postives = 249/330 (75.45%), Query Frame = 1


Query: 1   MCPPL-PSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSSSSSSSS 60
           MCPPL PS+LSST E S    +     S HF SMYHSIFPPLLSSSSL  + S + S SS
Sbjct: 5   MCPPLLPSSLSSTTELSVAEFED---FSQHFASMYHSIFPPLLSSSSLPNSLSFTPSPSS 64

Query: 61  ADDDFNNPCTAAP-TSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENA 120
           ADDD NN CT A  TSTTDDLL QARLILE+R L  RHDLCLRRLRQV+DD D LR+ENA
Sbjct: 65  ADDDHNNHCTTATATSTTDDLLVQARLILENRHLRHRHDLCLRRLRQVSDDADYLRQENA 124

Query: 121 QLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGY-EIISPTSVIRKYNN 180
           QL+LANAEL+K++SSKTA+DDLV+IPNSHLRSLIG GQ+G+E+GY +IISPTSVI KYN+
Sbjct: 125 QLRLANAELVKVISSKTAIDDLVSIPNSHLRSLIGGGQSGDEIGYNDIISPTSVIGKYND 184

Query: 181 QLEGRNNRRRTSLPKSISVRSAAASAAAAAPLNIQSVEFLNFYVYLFEIMYYLKNVINNN 240
           Q +GRNN  R SLPKSIS+RSAAA AA++AP NI+                 L+      
Sbjct: 185 QFDGRNNLHRISLPKSISIRSAAA-AASSAPPNIK-----------------LRGACTPV 244

Query: 241 SIG--QRRVCGPVELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPR 300
           S G  ++R     E EVY QG  KTE+C KW+E G CPYG HCRFAHG+EELRPV+RHPR
Sbjct: 245 SDGGSRKREEEATEFEVYNQGTTKTELCNKWQEIGDCPYGNHCRFAHGLEELRPVMRHPR 304

Query: 301 YKTQICRMVLSGEKCCYGHRCHFRHSLTHQ 326
           YKTQ+CRMVL+G+KC YGHRCHFRHSL+ Q
Sbjct: 305 YKTQMCRMVLAGQKCPYGHRCHFRHSLSEQ 313

[Close]

BLAST of Cp4.1LG01g25920 vs. NCBI nr
Match: gi|703146825|ref|XP_010108899.1| (Zinc finger CCCH domain-containing protein 14 [Morus notabilis])

HSP 1 Score: 219.2 bits (557), Expect = 1.1e-53
Identity = 157/348 (45.11%), Postives = 195/348 (56.03%), Query Frame = 1


Query: 3   PPLPSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSS--SSLSFTPSSSSSSSSA 62
           PPL     +    S NSP+  +     F SMY SIFP   S   SSLS TPS+ SSS+  
Sbjct: 21  PPLAMAQGTRQNFSENSPEARDF-GAEFFSMYRSIFPAKSSPLPSSLSLTPSTRSSSAGG 80

Query: 63  DDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQL 122
                        STT+  L QARLILEH++L  ++DL    LR +  ++D LRRENA+L
Sbjct: 81  GGGCYED-----ESTTEHRLIQARLILEHQQLNDQYDLFQTHLRNLNKEIDFLRRENAEL 140

Query: 123 QLANAELIKILSSKTAVDDLV----AIPNSHL----RSLIGEGQNGEEVGYEI-----IS 182
           +  N EL+KILSS  A    +    A PN  L    R L   G    + G+ +     IS
Sbjct: 141 RSVNTELLKILSSPAAFQGFLLSSGAYPNQSLLDSFRRLDIGGVLAPDHGHGVEDVSDIS 200

Query: 183 PTSVIRKYNNQLEGRNNRRRTSLPKSISVRSAAASAAAAAPLNIQSVEFLNFYVYLFEIM 242
           PTSV+    N++E R +  R SLPKSISVRS     A +      S E            
Sbjct: 201 PTSVME--TNRIE-RPSAERVSLPKSISVRSTGYQKAISHSPGNSSREGPG---RSSNRP 260

Query: 243 YYLKNVINNNSIGQR----------RVCGPVELEVYKQGMEKTEVCKKWEESGGCPYGEH 302
             + N I + +  QR             G +EL+VY QGM KTE+C KW+++G CPYGEH
Sbjct: 261 RSVPNPIASRTETQRVYVPGVGEKEEESGGLELDVYNQGMFKTELCNKWQQTGACPYGEH 320

Query: 303 CRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHQ 326
           C+FAHG+ ELRPVIRHPRYKT+ICRMVLSGE+C YGHRCHFRHSLT Q
Sbjct: 321 CQFAHGITELRPVIRHPRYKTEICRMVLSGERCPYGHRCHFRHSLTEQ 356

[Close]

BLAST of Cp4.1LG01g25920 vs. NCBI nr
Match: gi|1009126226|ref|XP_015880037.1| (PREDICTED: zinc finger CCCH domain-containing protein 14 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 216.9 bits (551), Expect = 5.4e-53
Identity = 149/349 (42.69%), Postives = 199/349 (57.02%), Query Frame = 1


Query: 6   PSTLSSTAEASPNSPQPENL----CSLHFVSMYHSIFPPLLSSSSLSFTPSSSSSSSSAD 65
           P  L S      N P P           F SMY +IFPP   SS LS TPS++ SSS  +
Sbjct: 23  PHDLFSQISTYSNFPAPSQENGRDFGADFASMYRAIFPPNFPSS-LSLTPSTTHSSSCGE 82

Query: 66  DDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQLQ 125
           D+          + T+  L QA LILE +EL    DLC   L ++T +V+ LRREN++L+
Sbjct: 83  DE---------AAVTEHRLNQACLILECQELRDGFDLCRANLHEITKEVEYLRRENSELR 142

Query: 126 LANAELIKILSSKTAVDDLV---AIPNSHL-----RSLIG-----EGQNGEEVGYEIISP 185
            AN EL+K+LSS+T    ++   + PN        R  IG          EEV    ISP
Sbjct: 143 SANTELVKLLSSQTTFQSVLLSSSYPNRSFMQNFRRLNIGGTTAPNAHGSEEVSN--ISP 202

Query: 186 TSVIRKYNNQLEGRNNRRRTSLPKSISVRSA--------AASAAAAAPLNIQSVEFLNFY 245
           TSV+   NN+ + R+N  R +LPKSISVRS+        A+++    P  I +   +   
Sbjct: 203 TSVME--NNRFQRRSNTERINLPKSISVRSSGYPKLNQSASASNVDGPSRISTRPQVTGP 262

Query: 246 VYLFEIMYYLKNVINNNSIGQR----RVCGPVELEVYKQGMEKTEVCKKWEESGGCPYGE 305
           +       Y+     + S G+R       G +ELEVY QGM KTE+C KW+E+G CPYG+
Sbjct: 263 LVSGSQRVYVPAGCGSGS-GKRDQDSEGGGDLELEVYNQGMFKTELCNKWQETGTCPYGD 322

Query: 306 HCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHQ 326
           HC+FAHG++ELRP+IRHPRYKT++CRMV+ G++C YGHRCHFRHSLT Q
Sbjct: 323 HCQFAHGIKELRPIIRHPRYKTEVCRMVMGGDRCPYGHRCHFRHSLTEQ 356

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g25920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
C3H14_ARATH	7.3e-50	39.94	Zinc finger CCCH domain-containing protein 14 OS=Arabidopsis thaliana GN=At1g668...	[more]
C3H9_ORYSJ	1.5e-39	37.65	Zinc finger CCCH domain-containing protein 9 OS=Oryza sativa subsp. japonica GN=...	[more]
C3H39_ORYSJ	2.0e-39	38.57	Zinc finger CCCH domain-containing protein 39 OS=Oryza sativa subsp. japonica GN...	[more]
C3H15_ARATH	3.5e-36	35.93	Zinc finger CCCH domain-containing protein 15 OS=Arabidopsis thaliana GN=At1g682...	[more]
C3H21_ORYSJ	4.0e-24	31.33	Putative zinc finger CCCH domain-containing protein 21 OS=Oryza sativa subsp. ja...	[more]

BLAST of Cp4.1LG01g25920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQS7_CUCSA	2.0e-102	64.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404980 PE=4 SV=1	[more]
W9S101_9ROSA	7.6e-54	45.11	Zinc finger CCCH domain-containing protein 14 OS=Morus notabilis GN=L484_027093 ...	[more]
B9SQ02_RICCO	8.4e-53	44.37	Zinc finger protein, putative OS=Ricinus communis GN=RCOM_0467770 PE=4 SV=1	[more]
A0A059BTI7_EUCGR	2.1e-51	41.30	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02796 PE=4 SV=1	[more]
A0A067KL69_JATCU	3.9e-50	42.44	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13051 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g25920 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G66810.1	4.1e-51	39.94	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G68200.1	2.0e-37	35.93	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G35430.1	4.0e-06	58.62	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G32360.1	6.8e-06	47.37	Zinc finger (CCCH-type) family protein	[more]

BLAST of Cp4.1LG01g25920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442060\|ref\|XP_004138800.1\|	2.8e-102	64.83	PREDICTED: zinc finger CCCH domain-containing protein 14-like [Cucumis sativus]	[more]
gi\|700208028\|gb\|KGN63147.1\|	2.8e-102	64.83	hypothetical protein Csa_2G404980 [Cucumis sativus]	[more]
gi\|659081374\|ref\|XP_008441301.1\|	1.1e-101	65.15	PREDICTED: zinc finger CCCH domain-containing protein 14-like [Cucumis melo]	[more]
gi\|703146825\|ref\|XP_010108899.1\|	1.1e-53	45.11	Zinc finger CCCH domain-containing protein 14 [Morus notabilis]	[more]
gi\|1009126226\|ref\|XP_015880037.1\|	5.4e-53	42.69	PREDICTED: zinc finger CCCH domain-containing protein 14 isoform X2 [Ziziphus ju...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR000571	Znf_CCCH

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0050794	regulation of cellular process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g25920.1	Cp4.1LG01g25920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	GENE3D	G3DSA:4.10.1000.10		coord: 291..321 score: 1.4E-9coord: 254..290 score: 9.8
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 259..283 score: 4.6
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 257..284 score: 2.0E-8coord: 295..322 score: 0
IPR000571	Zinc finger, CCCH-type	PROFILE	PS50103	ZF_C3H1	coord: 295..323 score: 12.615coord: 257..285 score: 1
IPR000571	Zinc finger, CCCH-type	unknown	SSF90229	CCCH zinc finger	coord: 255..289 score: 7.46E-10coord: 291..322 score: 2.7
None	No IPR available	unknown	Coil	Coil	coord: 103..130 scor
None	No IPR available	PANTHER	PTHR12547	CCCH ZINC FINGER/TIS11-RELATED	coord: 7..325 score: 2.9
None	No IPR available	PANTHER	PTHR12547:SF60	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14-RELATED	coord: 7..325 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g25920	Cucsa.087930	Cucumber (Gy14) v1	cgycpeB0164
Cp4.1LG01g25920	CmaCh04G029860	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g25920	CmoCh04G031070	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g25920	Cla011852	Watermelon (97103) v1	cpewmB454
Cp4.1LG01g25920	Csa2G404980	Cucumber (Chinese Long) v2	cpecuB386
Cp4.1LG01g25920	MELO3C008166	Melon (DHL92) v3.5.1	cpemeB400
Cp4.1LG01g25920	ClCG11G007630	Watermelon (Charleston Gray)	cpewcgB356
Cp4.1LG01g25920	CSPI02G25410	Wild cucumber (PI 183967)	cpecpiB385
Cp4.1LG01g25920	Lsi03G004160	Bottle gourd (USVL1VR-Ls)	cpelsiB339
Cp4.1LG01g25920	MELO3C008166.2	Melon (DHL92) v3.6.1	cpemedB465
Cp4.1LG01g25920	CsaV3_2G033930	Cucumber (Chinese Long) v3	cpecucB0482
Cp4.1LG01g25920	Bhi04G002007	Wax gourd	cpewgoB0525
Cp4.1LG01g25920	CsGy2G025050	Cucumber (Gy14) v2	cgybcpeB214
Cp4.1LG01g25920	Carg06059	Silver-seed gourd	carcpeB0034

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g25920	Cucurbita pepo (Zucchini)	cpecpeB199
Cp4.1LG01g25920	Cucurbita maxima (Rimu)	cmacpeB317
Cp4.1LG01g25920	Cucurbita moschata (Rifu)	cmocpeB279
Cp4.1LG01g25920	Silver-seed gourd	carcpeB1408