Cla011852 (gene) Watermelon (97103) v1

Overview
NameCla011852
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionZinc finger protein (AHRD V1 *--* Q4H2G7_CIOIN); contains Interpro domain(s) IPR000571 Zinc finger, CCCH-type
LocationChr11 : 2356817 .. 2359233 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAGGAGATGTGTCCGCCATTGCCGTCGAGTCTTTCTTCAACCACCGAAGTATCAGCGGATGAAATGGAAGATTTCAGCCTGCATTTCGCTTCAATGTATCATTCCATTTTCCCTCCATTATTATCTTCCTCCTCTCTTCCAACCTCTCTTTCATTCACTCCCTCCCCCTCCTCCTCTTCCGCCGACGACGACCACAACCACCACTGCACCACCGCCGCCACTTCCGCCACTGACGACCTCCTTTTTCAGGCCCGTCTTATACTCGAACACCGTCACCTCCGTCACCGCCACGATCTCTGCCTCCGCCGCCTCCGTCAAGTCGCTGAAGATGCTGATTATCTCCGGCAGGAGAATGCCCAGCTCCGATTGGCCAACGCCGAGCTCGTGAAGGTTATTTCGTCGAAGACCGCCGTCGACGATCTCATTTCAATTCCGAATTCCCATCTCCGGTCTCTGATTGGAGGCGGAGAAGAAATTGGTTATGATATAATCAGTCCGACGAGTGTGATAGGGAAATACAATGACCAGTTCGACGGAACGAATAATTTCCGCCGGATCTCTCTTCCAAAGAGCATTTCCATCCGCTCCGCAACTGCTGCCGCCGCCGCTCCACTCAACATCCAATCGGTAAGCTTCCTCAACTTATTCTTATTATTATTTTATTTATTTTATTGTTTTCCGTTGTGGGGACATTGAAATTACTTGACAAAAAAAAGCTAAATTACAAAAATACTCAATGTCTAAAATGAAATGTTCATATATACCAATATTACGAAAATGTCAAGAATACTTTTGAAAAACAATATTTGAAAATTTTCCCAAAAAAAATATTTAAATTGATTAATATAAACATTTCATACTTTCTTAATGAATTAAAACGTTTCTTATGTATATTATATACATATTAACATCATTAGTGACATTTTATTGCATTTTTTTTAATGTTTCATTGATTTTTATGGTATGATGGGAATGTCGATTCATTCTCATGTCGATGTTGAGCTCATGAATATGTAAAATATCTAAAAATGTTGACATGTTGATGAAAATTAATACCCTAGCTAGAATTTTGTCATTTGTTTAAAAAACTATTCACATTCTTATTTCAAAATTTACGTCATTAAACAAGACTTGGAACGACATAATTTAGTGATGATCCAAAATAAAAATTGAGATCCAAACACGACACACTAGATCATTTTTCCCCTATTAATGTAAATCTAAAATTCTAAACATATTTCTATTTGAGGAGTATTTTTAATTTGCAACATTTATAAGAGTTGGTTAAGGGTTATATTTCAACTTTTGAAAGTATTTATATATATAAATAATAGTCCTTGTGATTGTTTCTTTCAATAATTTGTTTTCTTATCACTCTTCTTCAGTTATTTGTATTTTTGGTCCTAAAATGTTTTAATTACTACAAGTTACTAATCTCAACTATCTTTTTCGGCCTACCTATTAGTTGCTTAATGAATCTCTAAAATTATTTAATAAAGTAATGTTTAGATAAGCATTATTCAAGCTAAGGATTTAAATATAATGTTAGATATGTGTCAATTTTATAATAGTATTAATGTAGGAATTTCAAAGAAAATGGATTTAGGAAAATTATTTTAAATAGCAAAATTGTTGAAAATATTTTATAACAAAATATTATAGTTTATCTTTGACAGACCATGATAGAGTGTGATATTTTACTAAATTTATAAATATTTTTATTCATTTTTCTATATTTGAAAATGGCCCAAGTTTTTATTTAAGAAGATAAATGGAAATGTTAATGTTAATGTTAATAAGGGTTTTTTTTTTTTTAAATCAATAAAATATTTAAATTAATAAATAAGTATTTCAAACATTAAAATATTATTCCAATGGGTACTGGATGAATTACTACAAGCTTGGTAGGAGTTATTGAAGCCTATGTCTAAGAATTTGTTTGATTTTTGAAAAAATGTATTTAAGAGAGATATATAGCTAAAATTTTAAATGTATCTAATTAAAAAGCTGAAAAGAAGTAATTAGGTAGGGAAGATTGGAATGATTTTAAAGACAAAAGGTTAGACAAGTATTTGAGGCATGAGTTGAAAGTTAGATATGGTTTTATGATATAGCAGCGTGGGGCATGCACTCCGGTGAGTAATGGTAGGAGCAGAAATAGAGAAGAGGAGGCGGTAGAATTGGAGGTGTACAATCAAGGCATGACCAAGACGGAGCTATGCAACAAATGGCAAGAGACCGGCGGCTGCCCTTATGGGGGCCATTGTCGATTTGCTCATGGACTTGAAGAGCTTCGGCCGGTCATGAGACACCCACGTTACAAGACACAAATGTGTAGGATGGTACTCGCGGGTGAAAACTGTCCTTATGGTCATCGCTGTCATTTTCGCCATTCTCTTACCGAACAATAA

mRNA sequence

ATGGAAGAGGAGATGTGTCCGCCATTGCCGTCGAGTCTTTCTTCAACCACCGAAGTATCAGCGGATGAAATGGAAGATTTCAGCCTGCATTTCGCTTCAATGTATCATTCCATTTTCCCTCCATTATTATCTTCCTCCTCTCTTCCAACCTCTCTTTCATTCACTCCCTCCCCCTCCTCCTCTTCCGCCGACGACGACCACAACCACCACTGCACCACCGCCGCCACTTCCGCCACTGACGACCTCCTTTTTCAGGCCCGTCTTATACTCGAACACCGTCACCTCCGTCACCGCCACGATCTCTGCCTCCGCCGCCTCCGTCAAGTCGCTGAAGATGCTGATTATCTCCGGCAGGAGAATGCCCAGCTCCGATTGGCCAACGCCGAGCTCGTGAAGGTTATTTCGTCGAAGACCGCCGTCGACGATCTCATTTCAATTCCGAATTCCCATCTCCGGTCTCTGATTGGAGGCGGAGAAGAAATTGGTTATGATATAATCAGTCCGACGAGTGTGATAGGGAAATACAATGACCAGTTCGACGGAACGAATAATTTCCGCCGGATCTCTCTTCCAAAGAGCATTTCCATCCGCTCCGCAACTGCTGCCGCCGCCGCTCCACTCAACATCCAATCGCGTGGGGCATGCACTCCGGTGAGTAATGGTAGGAGCAGAAATAGAGAAGAGGAGGCGGTAGAATTGGAGGTGTACAATCAAGGCATGACCAAGACGGAGCTATGCAACAAATGGCAAGAGACCGGCGGCTGCCCTTATGGGGGCCATTGTCGATTTGCTCATGGACTTGAAGAGCTTCGGCCGGTCATGAGACACCCACGTTACAAGACACAAATGTGTAGGATGGTACTCGCGGGTGAAAACTGTCCTTATGGTCATCGCTGTCATTTTCGCCATTCTCTTACCGAACAATAA

Coding sequence (CDS)

ATGGAAGAGGAGATGTGTCCGCCATTGCCGTCGAGTCTTTCTTCAACCACCGAAGTATCAGCGGATGAAATGGAAGATTTCAGCCTGCATTTCGCTTCAATGTATCATTCCATTTTCCCTCCATTATTATCTTCCTCCTCTCTTCCAACCTCTCTTTCATTCACTCCCTCCCCCTCCTCCTCTTCCGCCGACGACGACCACAACCACCACTGCACCACCGCCGCCACTTCCGCCACTGACGACCTCCTTTTTCAGGCCCGTCTTATACTCGAACACCGTCACCTCCGTCACCGCCACGATCTCTGCCTCCGCCGCCTCCGTCAAGTCGCTGAAGATGCTGATTATCTCCGGCAGGAGAATGCCCAGCTCCGATTGGCCAACGCCGAGCTCGTGAAGGTTATTTCGTCGAAGACCGCCGTCGACGATCTCATTTCAATTCCGAATTCCCATCTCCGGTCTCTGATTGGAGGCGGAGAAGAAATTGGTTATGATATAATCAGTCCGACGAGTGTGATAGGGAAATACAATGACCAGTTCGACGGAACGAATAATTTCCGCCGGATCTCTCTTCCAAAGAGCATTTCCATCCGCTCCGCAACTGCTGCCGCCGCCGCTCCACTCAACATCCAATCGCGTGGGGCATGCACTCCGGTGAGTAATGGTAGGAGCAGAAATAGAGAAGAGGAGGCGGTAGAATTGGAGGTGTACAATCAAGGCATGACCAAGACGGAGCTATGCAACAAATGGCAAGAGACCGGCGGCTGCCCTTATGGGGGCCATTGTCGATTTGCTCATGGACTTGAAGAGCTTCGGCCGGTCATGAGACACCCACGTTACAAGACACAAATGTGTAGGATGGTACTCGCGGGTGAAAACTGTCCTTATGGTCATCGCTGTCATTTTCGCCATTCTCTTACCGAACAATAA

Protein sequence

MEEEMCPPLPSSLSSTTEVSADEMEDFSLHFASMYHSIFPPLLSSSSLPTSLSFTPSPSSSSADDDHNHHCTTAATSATDDLLFQARLILEHRHLRHRHDLCLRRLRQVAEDADYLRQENAQLRLANAELVKVISSKTAVDDLISIPNSHLRSLIGGGEEIGYDIISPTSVIGKYNDQFDGTNNFRRISLPKSISIRSATAAAAAPLNIQSRGACTPVSNGRSRNREEEAVELEVYNQGMTKTELCNKWQETGGCPYGGHCRFAHGLEELRPVMRHPRYKTQMCRMVLAGENCPYGHRCHFRHSLTEQ
Homology
[Close]
BLAST of Cla011852 vs. Swiss-Prot
Match: C3H14_ARATH (Zinc finger CCCH domain-containing protein 14 OS=Arabidopsis thaliana GN=At1g66810 PE=2 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.2e-55
Identity = 130/316 (41.14%), Postives = 169/316 (53.48%), Query Frame = 1 

Query: 8   PLPSSLSSTTEVSADEMEDFSLHFASMYHSIFPPLLSSSSLPTSLSFTPSPSSSSADDDH 67
           P P S  S    +    E+F+  FAS+Y+SIF P           S +PSP SSS+    
Sbjct: 22  PPPLSPISEQSFNNKHQEEFAASFASLYNSIFSPE----------SLSPSPPSSSSPPSR 81

Query: 68  NHHCTTAATSATDDLLFQARLILEHRHLRHRHDLCLRRLRQVAEDADYLRQENAQLRLAN 127
                    + T+  L QA+LILE+  L   ++LCL RL+ +  + D LR EN  LR  N
Sbjct: 82  -------VDTTTEHRLLQAKLILEYDELNEHYELCLNRLQSLMTELDSLRHENDSLRFEN 141

Query: 128 AELVKVISSKTAVDDLISIP----NSHLRSLIGGGEEIGYDIISPTSVIGKYNDQFDGTN 187
           ++L+K+I   T+    +S P    N   R  I                           N
Sbjct: 142 SDLLKLIRISTSSSSSVSPPAPIHNRQFRHQISDSRSAK-------------------RN 201

Query: 188 NFRRISLPKSISIRS-----------ATAAAAAPLNIQSRGACTPVSNGRSRNREEEAVE 247
           N  R SLPKSIS+RS           A+    + L+  S  +   V   +++  E EA+E
Sbjct: 202 NQERNSLPKSISVRSQGYLKINHGFEASDLQTSQLSSNSVSSSQKVCVVQTKG-EREALE 261

Query: 248 LEVYNQGMTKTELCNKWQETGGCPYGGHCRFAHGLEELRPVMRHPRYKTQMCRMVLAGEN 307
           LEVY QGM KTELCNKWQETG C YG +C+FAHG++ELRPV+RHPRYKT++CRM++ G  
Sbjct: 262 LEVYRQGMMKTELCNKWQETGACCYGDNCQFAHGIDELRPVIRHPRYKTEVCRMMVTGAM 300

Query: 308 CPYGHRCHFRHSLTEQ 309
           CPYGHRCHFRHSLT+Q
Sbjct: 322 CPYGHRCHFRHSLTDQ 300

[Close]
BLAST of Cla011852 vs. Swiss-Prot
Match: C3H9_ORYSJ (Zinc finger CCCH domain-containing protein 9 OS=Oryza sativa subsp. japonica GN=Os01g0645000 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.1e-50
Identity = 124/289 (42.91%), Postives = 161/289 (55.71%), Query Frame = 1 

Query: 44  SSSSLPTSLSFTPSPSSSSADDDHNHHCTTAATSATDDLLFQARLILEHRHLRHRHDLCL 103
           S S L TS+S +PS S+S  DD  +     AA  AT   L  ARL L+++ +  R++LCL
Sbjct: 54  SPSPLATSVSLSPSSSASLVDDGDDGG---AAADATGQRLQLARLALQYQEVADRYELCL 113

Query: 104 RRLRQVAEDADYLRQENAQLRLANAELVKVISSKTAVDDLISIPNSHLRSLIGGGEEIGY 163
             L + AE+A  LR ENA+LR+ N++L   ++  +            +R L  G +++  
Sbjct: 114 SHLAEAAEEAAALRLENAELRVTNSDLALRLALLSGKHTAAVAVADEIRRLRLGEQKVAA 173

Query: 164 DIISPTSVIGKYNDQFDGTNNFRRISLPKSISIRS------------ATAAAAAPLNIQS 223
                T                +   LPKSIS+RS            ATA +AAP N + 
Sbjct: 174 ATKERTPE--------------KLAVLPKSISVRSTSYLKLNQQSQAATATSAAP-NRKP 233

Query: 224 RGACTPVS--------NGRSRNREEEA------VELEVYNQGMTKTELCNKWQETGGCPY 283
           R +  P +        +G  +  E++A       ELEVYNQGM KTELCNKW+ETG CPY
Sbjct: 234 RTSSNPTNPPNSQRAYDGGKKGDEQKAQPADSGAELEVYNQGMFKTELCNKWEETGDCPY 293

Query: 284 GGHCRFAHGLEELRPVMRHPRYKTQMCRMVLAGENCPYGHRCHFRHSLT 307
           G  C+FAHG+ ELRPV+RHPRYKT +CRMVLAG+ CPYGHRCHFRHSLT
Sbjct: 294 GDQCQFAHGVTELRPVIRHPRYKTAVCRMVLAGDVCPYGHRCHFRHSLT 324

[Close]
BLAST of Cla011852 vs. Swiss-Prot
Match: C3H15_ARATH (Zinc finger CCCH domain-containing protein 15 OS=Arabidopsis thaliana GN=At1g68200 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.4e-49
Identity = 119/285 (41.75%), Postives = 162/285 (56.84%), Query Frame = 1 

Query: 56  PSPSSSSADDDHNHHCTTAATSATDDLLFQARLILEHRH-LRHRHDLCLRRLRQVAEDAD 115
           P   S S+  + +     +++  +D L    R I++ R  + +R  LC  RL + + +A+
Sbjct: 7   PFSYSGSSAGNSSSGGVVSSSLYSDQLYKSTRNIMQQRQDMVNREALCYTRLHEASLEAE 66

Query: 116 YLRQENAQLRLANAELVKVISS--KTAVDDLISIPNSHLRSL----IGGGEEIGYDIISP 175
            LR EN +LR  N  L   ++S  ++++ +      S LR L    IGG +    +  + 
Sbjct: 67  ALRLENTELRSMNLRLKNELNSLIRSSIQNRFD-HRSPLRMLSNLSIGGNDADEVENQNR 126

Query: 176 TSVIGKYNDQFDGT----NNFRRISLPKSISIRS------------ATAAAAAPLNIQSR 235
           T      ND+   +     +  R SLPKSIS+RS            A A +  P    ++
Sbjct: 127 TVNRDDVNDKSPTSVMENEDLNRSSLPKSISVRSNGYSKASQGGGGAAAQSGKPRGTVTK 186

Query: 236 -GACTPVSN--------GRSRNREEEAVELEVYNQGMTKTELCNKWQETGGCPYGGHCRF 295
            G C  VS         G  +  +EE +E+EVYNQGMTKTELCNKWQETG CPYG HC+F
Sbjct: 187 PGTCGQVSTTQKVYVRGGGKKEDQEEEIEVEVYNQGMTKTELCNKWQETGTCPYGDHCQF 246

Query: 296 AHGLEELRPVMRHPRYKTQMCRMVLAGENCPYGHRCHFRHSLTEQ 309
           AHG++ELRPV+RHPRYKT++CRMVLAG+NCPYGHRCHFRHSL+EQ
Sbjct: 247 AHGIKELRPVIRHPRYKTEVCRMVLAGDNCPYGHRCHFRHSLSEQ 290

[Close]
BLAST of Cla011852 vs. Swiss-Prot
Match: C3H39_ORYSJ (Zinc finger CCCH domain-containing protein 39 OS=Oryza sativa subsp. japonica GN=Os05g0576300 PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.3e-45
Identity = 119/300 (39.67%), Postives = 160/300 (53.33%), Query Frame = 1 

Query: 36  HSIFPPLLSSSSLPTSLSFTPSPSSSSADDDHNHHCTTAATSATDDLLFQARLILEHRHL 95
           +S F P    S  P   + + S  SSS+D   +      A +AT+  L  A L L+++ +
Sbjct: 47  YSPFSPTRVLSPPPPRRAASFSHCSSSSDSVVDDGDGAGAAAATEHRLHLAHLALQYQEM 106

Query: 96  RHRHDLCLRRLRQVAEDADYLRQENAQLRLANAELVKVI--------SSKTAVDDL--IS 155
            +R +LCL  L   A++A  LRQENA+LR+AN +L   I        S+     DL  + 
Sbjct: 107 ANRFELCLSHLADAADEAAALRQENAELRVANNDLACRIAKFGGRQSSAIALAGDLRRLR 166

Query: 156 IPNSH-LRSLIGGGEEIGYDIISPTSVIGKYNDQFDGTNNFRRISLPKSISIRSA----- 215
           +P    + +L    +     +++P +V  K            +  LPKSISIRS      
Sbjct: 167 LPKEQTVPALPPPPQSPPAALMNPVAVPEK------------QAVLPKSISIRSTGYQKL 226

Query: 216 ----TAAAAAPLNIQSRGACTPVSNGRSRN-----REEE----AVELEVYNQGMTKTELC 275
                   + P+N+ S+     +            ++EE     +E EVYNQGM KTELC
Sbjct: 227 NQGGKHRVSKPVNVGSQRVFVGIDGAEGGEHKVGVKKEEPPMGGLEFEVYNQGMFKTELC 286

Query: 276 NKWQETGGCPYGGHCRFAHGLEELRPVMRHPRYKTQMCRMVLAGENCPYGHRCHFRHSLT 307
           NKW+ETG CPYG  C+FAHG+ ELRPV+RHPRYKTQ+CRMVLAG  CPYGHRCHFRHS+T
Sbjct: 287 NKWEETGACPYGDQCQFAHGVAELRPVIRHPRYKTQVCRMVLAGGVCPYGHRCHFRHSIT 334

[Close]
BLAST of Cla011852 vs. Swiss-Prot
Match: C3H21_ORYSJ (Putative zinc finger CCCH domain-containing protein 21 OS=Oryza sativa subsp. japonica GN=Os03g0301500 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.5e-33
Identity = 101/280 (36.07%), Postives = 133/280 (47.50%), Query Frame = 1 

Query: 39  FPPLLSSSSLPTSLSFTPSPSSSSADDDHNHHCTTAATSATDDL-LFQARLILEHRHLRH 98
           FP L  +SSL   L+   SPSS  +D     + +    SA  +  + +A ++L  R +  
Sbjct: 181 FPSLPWASSLEKPLT---SPSSCVSDGRSGGYSSPLGASAEREREVREAEMLL--RAIAE 240

Query: 99  RHDLCLRRLRQVAEDADYLRQENAQLRLANAELVKVI----SSKTAVDDLISIPNSHLRS 158
           R+D C  RLR  A +   L +E  +L   N  L  ++    S +      ++ P      
Sbjct: 241 RYDDCFLRLRDAAAELSDLHRERLRLAAENLHLSLLLEELESEQRKQASAMAPPKLEEDE 300

Query: 159 LIGGGEEIGYDIISPTSVIGKYNDQFDGTNNFRRISLPKSISIRSATAAAAAPLN---IQ 218
              GG      I SP      Y  Q       R    P+ + +R++ A   +  N     
Sbjct: 301 AAQGGAPKSISIRSPG-----YLSQKPPQGQAR----PQRLRVRASQAMEISHPNCLIFV 360

Query: 219 SRGACTPVSNGRSRNREEEA------VELEVYNQGMTKTELCNKWQETGGCPYGGHCRFA 278
               C+P     + + E+E       VE+E Y QG  KTELCNKW E G CPYG  CRFA
Sbjct: 361 MGNQCSPKEAAAAGDEEDEEDKGGGEVEVEAYRQGAAKTELCNKW-ERGACPYGARCRFA 420

Query: 279 HGLEELRPVMRHPRYKTQMCRMVLAGENCPYGHRCHFRHS 305
           HGL+ELRPV+RHPRYKT  C+M  A   CPYGHRCHFRHS
Sbjct: 421 HGLQELRPVIRHPRYKTLPCQMFAAASGCPYGHRCHFRHS 445

[Close]
BLAST of Cla011852 vs. TrEMBL
Match: A0A0A0LQS7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404980 PE=4 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 2.9e-148
Identity = 267/313 (85.30%), Postives = 283/313 (90.42%), Query Frame = 1 

Query: 1   MEEEMCPPL-PSSLSSTTEVSADEMEDFSLHFASMYHSIFPPLLSSSSLPTSLSFTPSPS 60
           MEEEMCPPL PS+LS+TTE+SA E EDF  HFASMYHSIFPPLLSSSSLP SLSFTPSPS
Sbjct: 31  MEEEMCPPLLPSTLSTTTELSAVEYEDFGHHFASMYHSIFPPLLSSSSLPNSLSFTPSPS 90

Query: 61  SSSADDDHNHHCTT-AATSATDDLLFQARLILEHRHLRHRHDLCLRRLRQVAEDADYLRQ 120
           S  ADDDHN+HCTT AATS TDDLLFQARLILE+RHL HRHDLCLRRLRQVAEDADYLRQ
Sbjct: 91  S--ADDDHNNHCTTPAATSTTDDLLFQARLILENRHLHHRHDLCLRRLRQVAEDADYLRQ 150

Query: 121 ENAQLRLANAELVKVISSKTAVDDLISIPNSHLRSLIGGGE---EIGYDIISPTSVIGKY 180
           ENAQLRLANAELVKVISSKTAVDDL+SIPNSHLR+LIGGG+   EIGYD+ISPTSVIGKY
Sbjct: 151 ENAQLRLANAELVKVISSKTAVDDLVSIPNSHLRTLIGGGQSGDEIGYDMISPTSVIGKY 210

Query: 181 NDQFDGTNNFRRISLPKSISIRSATAAAAAPLNIQSRGACTPVSNGRSRNREEEAVELEV 240
           NDQFDG NN RR SLP+SIS+RSA AA++  LNI+SRGA TPVS+G SR REEEA E EV
Sbjct: 211 NDQFDGRNNLRRNSLPRSISVRSAAAASSVQLNIKSRGASTPVSDGGSRKREEEATEFEV 270

Query: 241 YNQGMTKTELCNKWQETGGCPYGGHCRFAHGLEELRPVMRHPRYKTQMCRMVLAGENCPY 300
           YNQG TKTELCNKWQE G CPYG HCRFAHGLEELRPVMRHPRYKTQMCRMVLAGE CPY
Sbjct: 271 YNQGTTKTELCNKWQEIGDCPYGNHCRFAHGLEELRPVMRHPRYKTQMCRMVLAGEKCPY 330

Query: 301 GHRCHFRHSLTEQ 309
           GHRCHFRHSL+EQ
Sbjct: 331 GHRCHFRHSLSEQ 341

[Close]
BLAST of Cla011852 vs. TrEMBL
Match: A0A059BTI7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02796 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 4.5e-64
Identity = 146/322 (45.34%), Postives = 191/322 (59.32%), Query Frame = 1 

Query: 7   PPLPSSLSSTTEVSADEMEDFSLHFASMYHSIFPPLLSSSSLPTSLSFTPSPSSSSADDD 66
           P  P S       S+   + F+ +F+++YHSIFPP    SS   S   TPS   SSA  D
Sbjct: 29  PHAPHSPPPAQSSSSPLNQQFAANFSALYHSIFPPNSPHSS---SALITPS-LCSSASSD 88

Query: 67  HNHHCTTAATSATDDLLFQARLILEHRHLRHRHDLCLRRLRQVAEDADYLRQENAQLRLA 126
            N + T  +T A +  L QARL+LE++ LR  +DLC   L  + E+ D LR+ENA+LRLA
Sbjct: 89  SNQNATARSTIAIEHRLNQARLVLEYQQLRDHYDLCRAHLNDLTEEIDSLRRENARLRLA 148

Query: 127 NAELVKVISSKTAVDDLISIPNSHLRSLIGGGEEIGYDII---SPTSVIGKYNDQFDGTN 186
           N+ELVK+++  +            L      G +   + +   SPTSV+ +   +   T+
Sbjct: 149 NSELVKLLNLPSQGTLQSCFRRLGLSDTNATGSDFSSEDVCSYSPTSVMDQSGYE---TS 208

Query: 187 NFRRISLPKSISIRSATAAAAAPLNIQSRGACTPVSNGRSRN-----------------R 246
           N  R+ LPKSIS+RS+           +  +  PVS  RS                   +
Sbjct: 209 NPERVWLPKSISVRSSGYLKLNQPAASNSRSSRPVSQLRSPRAQEPPKVQQRVYVPGGKK 268

Query: 247 EEEAVELEVYNQGMTKTELCNKWQETGGCPYGGHCRFAHGLEELRPVMRHPRYKTQMCRM 306
           E+EA+E EVY+QGM KTELCNKWQETG CPYG HC+FAHG+ ELRPV+RHPRYKT++CRM
Sbjct: 269 EQEALEFEVYSQGMFKTELCNKWQETGACPYGDHCQFAHGIAELRPVIRHPRYKTEVCRM 328

Query: 307 VLAGENCPYGHRCHFRHSLTEQ 309
           VLAG+ CPYGHRCHFRHSLTEQ
Sbjct: 329 VLAGDMCPYGHRCHFRHSLTEQ 343

[Close]
BLAST of Cla011852 vs. TrEMBL
Match: W9S101_9ROSA (Zinc finger CCCH domain-containing protein 14 OS=Morus notabilis GN=L484_027093 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.9e-63
Identity = 158/347 (45.53%), Postives = 198/347 (57.06%), Query Frame = 1 

Query: 7   PPLPSSLSSTTEVSAD--EMEDFSLHFASMYHSIFPPLLSSSSLPTSLSFTPSPSSSSAD 66
           PPL  +  +    S +  E  DF   F SMY SIFP    SS LP+SLS TPS  SSSA 
Sbjct: 21  PPLAMAQGTRQNFSENSPEARDFGAEFFSMYRSIFPA--KSSPLPSSLSLTPSTRSSSAG 80

Query: 67  DDHNHHCTTAATSATDDLLFQARLILEHRHLRHRHDLCLRRLRQVAEDADYLRQENAQLR 126
                +      S T+  L QARLILEH+ L  ++DL    LR + ++ D+LR+ENA+LR
Sbjct: 81  GGGGCY---EDESTTEHRLIQARLILEHQQLNDQYDLFQTHLRNLNKEIDFLRRENAELR 140

Query: 127 LANAELVKVISSKTAVDDLI---------SIPNSHLRSLIGG--GEEIGYDI-----ISP 186
             N EL+K++SS  A    +         S+ +S  R  IGG    + G+ +     ISP
Sbjct: 141 SVNTELLKILSSPAAFQGFLLSSGAYPNQSLLDSFRRLDIGGVLAPDHGHGVEDVSDISP 200

Query: 187 TSVIGKYNDQFDGTNNFRRISLPKSISIRSATAAAAAPLNIQSRGACTPVSNGRSRNR-- 246
           TSV+     +     +  R+SLPKSIS+RS     A      S G  +    GRS NR  
Sbjct: 201 TSVMETNRIE---RPSAERVSLPKSISVRSTGYQKAIS---HSPGNSSREGPGRSSNRPR 260

Query: 247 -----------------------EEEA--VELEVYNQGMTKTELCNKWQETGGCPYGGHC 306
                                  EEE+  +EL+VYNQGM KTELCNKWQ+TG CPYG HC
Sbjct: 261 SVPNPIASRTETQRVYVPGVGEKEEESGGLELDVYNQGMFKTELCNKWQQTGACPYGEHC 320

Query: 307 RFAHGLEELRPVMRHPRYKTQMCRMVLAGENCPYGHRCHFRHSLTEQ 309
           +FAHG+ ELRPV+RHPRYKT++CRMVL+GE CPYGHRCHFRHSLTEQ
Sbjct: 321 QFAHGITELRPVIRHPRYKTEICRMVLSGERCPYGHRCHFRHSLTEQ 356

[Close]
BLAST of Cla011852 vs. TrEMBL
Match: M5WWD3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018479mg PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 4.6e-61
Identity = 147/320 (45.94%), Postives = 190/320 (59.38%), Query Frame = 1 

Query: 10  PSSLSSTTEVSADEMEDFSLHFASMYHSIFPPLLSSSSLPTSLSFTPSPSSSSADDDHNH 69
           P+S  S+T        DF   FASMY SIFPP  +   LP+SLS TPS  SS +D D N 
Sbjct: 8   PTSPDSSTR-------DFGSDFASMYRSIFPPKFT---LPSSLSLTPSTRSSFSDSDSNS 67

Query: 70  HCTTAATSATDDLLFQARLILEHRHLRHRHDLCLRRLRQVAEDADYLRQENAQLRLANAE 129
                  +AT   L QA+LILE + LR  +DLC   LR +A++ D LR EN+ LR AN++
Sbjct: 68  DDHHHNHNATSQRLTQAQLILESQELRDHYDLCSAHLRDLADELDSLRLENSHLRSANSD 127

Query: 130 LVKVISSKTAVDDLISIPNSHLR-------SLIGGGEEIGYDI--------------ISP 189
           LVK++SS+ A    +   +S          S +     +G+                ISP
Sbjct: 128 LVKLLSSQAAFQSFLLSSSSSSAYQSPSTPSFLDDFRRLGFGSLGPRDGVVSDEASDISP 187

Query: 190 TSVIGKYNDQFDGTNNFRRISLPKSISIRSATAAAAAPLNIQSRGACTPVSNGRSRNREE 249
           TSVI +  ++FD  +   R++LPKSIS+RS+T     P  + S    +P  +        
Sbjct: 188 TSVIER--NRFDVVD---RVALPKSISVRSSTRPRV-PSQLFSG---SPTQS-------- 247

Query: 250 EAVELEVYNQGMTKTELCNKWQETGGCPYGGHCRFAHGLEELRPVMRHPRYKTQMCRMVL 309
              +++V+NQGM KTELCNKW+ETG CPYG +C+FAHG+ ELRPVMRHPRYKTQ+CRMV 
Sbjct: 248 ---QVKVFNQGMVKTELCNKWEETGTCPYGENCQFAHGVRELRPVMRHPRYKTQLCRMVA 297

[Close]
BLAST of Cla011852 vs. TrEMBL
Match: A0A061EGU1_THECC (Zinc finger protein, putative OS=Theobroma cacao GN=TCM_019357 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 2.5e-59
Identity = 136/293 (46.42%), Postives = 180/293 (61.43%), Query Frame = 1 

Query: 25  EDFSLHFASMYHSIFPPLLSSSSLPTSLSFTPSPSSSSADDDHNHHCTTAATSATDDLLF 84
           +D +  F+SMY+SIFPP   +S LP SLS TPS S SS+DD H +   T+   AT+  L 
Sbjct: 38  QDIATDFSSMYNSIFPP---NSPLPHSLSLTPS-SCSSSDDLHLNLKLTSDAIATEHRLN 97

Query: 85  QARLILEHRHLRHRHDLCLRRLRQVAEDADYLRQENAQLRLANAELVKVISSKTAVDDLI 144
           QARLILE+R L   +DLC  RL+ +  + + LR+EN  LR AN EL+K++S  +      
Sbjct: 98  QARLILEYRRLCDHYDLCFTRLQALIRELESLRRENTDLRTANTELIKLLSLHS------ 157

Query: 145 SIPNSHLRSLIGGGEEIGYDIISPTSVIGKYNDQFDGTNNFRRISLPKSISIRSAT---- 204
                   S       + ++ +S  +V        +G  N    SLPKS+S+RS++    
Sbjct: 158 --------SQAAMNRNLQHEEVSDLNVKRWERRSSNGQRN----SLPKSVSVRSSSYFKV 217

Query: 205 -----AAAAAPLNIQSRGACTPVSNGRSRNREEEAVELEVYNQGMTKTELCNKWQETGGC 264
                ++    +   SR    P     ++   E+A+ELEVYNQG  KTELCNKWQETG C
Sbjct: 218 NQQQGSSNQQRVVNPSRRMYVP---SEAKRELEKAMELEVYNQGTVKTELCNKWQETGTC 277

Query: 265 PYGGHCRFAHGLEELRPVMRHPRYKTQMCRMVLAGENCPYGHRCHFRHSLTEQ 309
           PYG  C+FAHG+ ELRPV+RHP+YKT++CRMVLAG+ CPYGHRCHFRHSLTEQ
Sbjct: 278 PYGDQCQFAHGITELRPVIRHPKYKTEVCRMVLAGQTCPYGHRCHFRHSLTEQ 305

[Close]
BLAST of Cla011852 vs. NCBI nr
Match: gi|449442060|ref|XP_004138800.1| (PREDICTED: zinc finger CCCH domain-containing protein 14-like [Cucumis sativus])

HSP 1 Score: 532.7 bits (1371), Expect = 4.2e-148
Identity = 267/313 (85.30%), Postives = 283/313 (90.42%), Query Frame = 1 

Query: 1   MEEEMCPPL-PSSLSSTTEVSADEMEDFSLHFASMYHSIFPPLLSSSSLPTSLSFTPSPS 60
           MEEEMCPPL PS+LS+TTE+SA E EDF  HFASMYHSIFPPLLSSSSLP SLSFTPSPS
Sbjct: 1   MEEEMCPPLLPSTLSTTTELSAVEYEDFGHHFASMYHSIFPPLLSSSSLPNSLSFTPSPS 60

Query: 61  SSSADDDHNHHCTT-AATSATDDLLFQARLILEHRHLRHRHDLCLRRLRQVAEDADYLRQ 120
           S  ADDDHN+HCTT AATS TDDLLFQARLILE+RHL HRHDLCLRRLRQVAEDADYLRQ
Sbjct: 61  S--ADDDHNNHCTTPAATSTTDDLLFQARLILENRHLHHRHDLCLRRLRQVAEDADYLRQ 120

Query: 121 ENAQLRLANAELVKVISSKTAVDDLISIPNSHLRSLIGGGE---EIGYDIISPTSVIGKY 180
           ENAQLRLANAELVKVISSKTAVDDL+SIPNSHLR+LIGGG+   EIGYD+ISPTSVIGKY
Sbjct: 121 ENAQLRLANAELVKVISSKTAVDDLVSIPNSHLRTLIGGGQSGDEIGYDMISPTSVIGKY 180

Query: 181 NDQFDGTNNFRRISLPKSISIRSATAAAAAPLNIQSRGACTPVSNGRSRNREEEAVELEV 240
           NDQFDG NN RR SLP+SIS+RSA AA++  LNI+SRGA TPVS+G SR REEEA E EV
Sbjct: 181 NDQFDGRNNLRRNSLPRSISVRSAAAASSVQLNIKSRGASTPVSDGGSRKREEEATEFEV 240

Query: 241 YNQGMTKTELCNKWQETGGCPYGGHCRFAHGLEELRPVMRHPRYKTQMCRMVLAGENCPY 300
           YNQG TKTELCNKWQE G CPYG HCRFAHGLEELRPVMRHPRYKTQMCRMVLAGE CPY
Sbjct: 241 YNQGTTKTELCNKWQEIGDCPYGNHCRFAHGLEELRPVMRHPRYKTQMCRMVLAGEKCPY 300

Query: 301 GHRCHFRHSLTEQ 309
           GHRCHFRHSL+EQ
Sbjct: 301 GHRCHFRHSLSEQ 311

[Close]
BLAST of Cla011852 vs. NCBI nr
Match: gi|700208028|gb|KGN63147.1| (hypothetical protein Csa_2G404980 [Cucumis sativus])

HSP 1 Score: 532.7 bits (1371), Expect = 4.2e-148
Identity = 267/313 (85.30%), Postives = 283/313 (90.42%), Query Frame = 1 

Query: 1   MEEEMCPPL-PSSLSSTTEVSADEMEDFSLHFASMYHSIFPPLLSSSSLPTSLSFTPSPS 60
           MEEEMCPPL PS+LS+TTE+SA E EDF  HFASMYHSIFPPLLSSSSLP SLSFTPSPS
Sbjct: 31  MEEEMCPPLLPSTLSTTTELSAVEYEDFGHHFASMYHSIFPPLLSSSSLPNSLSFTPSPS 90

Query: 61  SSSADDDHNHHCTT-AATSATDDLLFQARLILEHRHLRHRHDLCLRRLRQVAEDADYLRQ 120
           S  ADDDHN+HCTT AATS TDDLLFQARLILE+RHL HRHDLCLRRLRQVAEDADYLRQ
Sbjct: 91  S--ADDDHNNHCTTPAATSTTDDLLFQARLILENRHLHHRHDLCLRRLRQVAEDADYLRQ 150

Query: 121 ENAQLRLANAELVKVISSKTAVDDLISIPNSHLRSLIGGGE---EIGYDIISPTSVIGKY 180
           ENAQLRLANAELVKVISSKTAVDDL+SIPNSHLR+LIGGG+   EIGYD+ISPTSVIGKY
Sbjct: 151 ENAQLRLANAELVKVISSKTAVDDLVSIPNSHLRTLIGGGQSGDEIGYDMISPTSVIGKY 210

Query: 181 NDQFDGTNNFRRISLPKSISIRSATAAAAAPLNIQSRGACTPVSNGRSRNREEEAVELEV 240
           NDQFDG NN RR SLP+SIS+RSA AA++  LNI+SRGA TPVS+G SR REEEA E EV
Sbjct: 211 NDQFDGRNNLRRNSLPRSISVRSAAAASSVQLNIKSRGASTPVSDGGSRKREEEATEFEV 270

Query: 241 YNQGMTKTELCNKWQETGGCPYGGHCRFAHGLEELRPVMRHPRYKTQMCRMVLAGENCPY 300
           YNQG TKTELCNKWQE G CPYG HCRFAHGLEELRPVMRHPRYKTQMCRMVLAGE CPY
Sbjct: 271 YNQGTTKTELCNKWQEIGDCPYGNHCRFAHGLEELRPVMRHPRYKTQMCRMVLAGEKCPY 330

Query: 301 GHRCHFRHSLTEQ 309
           GHRCHFRHSL+EQ
Sbjct: 331 GHRCHFRHSLSEQ 341

[Close]
BLAST of Cla011852 vs. NCBI nr
Match: gi|659081374|ref|XP_008441301.1| (PREDICTED: zinc finger CCCH domain-containing protein 14-like [Cucumis melo])

HSP 1 Score: 531.6 bits (1368), Expect = 9.4e-148
Identity = 271/315 (86.03%), Postives = 284/315 (90.16%), Query Frame = 1 

Query: 1   MEEEMCPPL-PSSLSSTTEVSADEMEDFSLHFASMYHSIFPPLLSSSSLPTSLSFTPSPS 60
           MEEEMCPPL PSSLSSTTE+S  E EDFS HFASMYHSIFPPLLSSSSLP SLSFTPSPS
Sbjct: 1   MEEEMCPPLLPSSLSSTTELSVAEFEDFSQHFASMYHSIFPPLLSSSSLPNSLSFTPSPS 60

Query: 61  SSSADDDHNHHCTTA-ATSATDDLLFQARLILEHRHLRHRHDLCLRRLRQVAEDADYLRQ 120
           S  ADDDHN+HCTTA ATS TDDLL QARLILE+RHLRHRHDLCLRRLRQV++DADYLRQ
Sbjct: 61  S--ADDDHNNHCTTATATSTTDDLLVQARLILENRHLRHRHDLCLRRLRQVSDDADYLRQ 120

Query: 121 ENAQLRLANAELVKVISSKTAVDDLISIPNSHLRSLIGGGE---EIGY-DIISPTSVIGK 180
           ENAQLRLANAELVKVISSKTA+DDL+SIPNSHLRSLIGGG+   EIGY DIISPTSVIGK
Sbjct: 121 ENAQLRLANAELVKVISSKTAIDDLVSIPNSHLRSLIGGGQSGDEIGYNDIISPTSVIGK 180

Query: 181 YNDQFDGTNNFRRISLPKSISIRSATAAAA-APLNIQSRGACTPVSNGRSRNREEEAVEL 240
           YNDQFDG NN  RISLPKSISIRSA AAA+ AP NI+ RGACTPVS+G SR REEEA E 
Sbjct: 181 YNDQFDGRNNLHRISLPKSISIRSAAAAASSAPPNIKLRGACTPVSDGGSRKREEEATEF 240

Query: 241 EVYNQGMTKTELCNKWQETGGCPYGGHCRFAHGLEELRPVMRHPRYKTQMCRMVLAGENC 300
           EVYNQG TKTELCNKWQE G CPYG HCRFAHGLEELRPVMRHPRYKTQMCRMVLAG+ C
Sbjct: 241 EVYNQGTTKTELCNKWQEIGDCPYGNHCRFAHGLEELRPVMRHPRYKTQMCRMVLAGQKC 300

Query: 301 PYGHRCHFRHSLTEQ 309
           PYGHRCHFRHSL+EQ
Sbjct: 301 PYGHRCHFRHSLSEQ 313

[Close]
BLAST of Cla011852 vs. NCBI nr
Match: gi|1009126226|ref|XP_015880037.1| (PREDICTED: zinc finger CCCH domain-containing protein 14 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 255.8 bits (652), Expect = 9.9e-65
Identity = 155/342 (45.32%), Postives = 208/342 (60.82%), Query Frame = 1 

Query: 11  SSLSSTTEVSADEMEDFSLHFASMYHSIFPPLLSSSSLPTSLSFTPSPSSSSADDDHNHH 70
           S+ S+    S +   DF   FASMY +IFPP     + P+SLS TPS + SS+       
Sbjct: 31  STYSNFPAPSQENGRDFGADFASMYRAIFPP-----NFPSSLSLTPSTTHSSS------- 90

Query: 71  CTTAATSATDDLLFQARLILEHRHLRHRHDLCLRRLRQVAEDADYLRQENAQLRLANAEL 130
           C     + T+  L QA LILE + LR   DLC   L ++ ++ +YLR+EN++LR AN EL
Sbjct: 91  CGEDEAAVTEHRLNQACLILECQELRDGFDLCRANLHEITKEVEYLRRENSELRSANTEL 150

Query: 131 VKVISSKTAVDDLI---SIPN-----SHLRSLIG--------GGEEIGYDIISPTSVIGK 190
           VK++SS+T    ++   S PN     +  R  IG        G EE+    ISPTSV+  
Sbjct: 151 VKLLSSQTTFQSVLLSSSYPNRSFMQNFRRLNIGGTTAPNAHGSEEVSN--ISPTSVM-- 210

Query: 191 YNDQFDGTNNFRRISLPKSISIRSA-------TAAAA---APLNIQSRGACT-PVSNGRS 250
            N++F   +N  RI+LPKSIS+RS+       +A+A+    P  I +R   T P+ +G  
Sbjct: 211 ENNRFQRRSNTERINLPKSISVRSSGYPKLNQSASASNVDGPSRISTRPQVTGPLVSGSQ 270

Query: 251 R------------NREEEA-----VELEVYNQGMTKTELCNKWQETGGCPYGGHCRFAHG 309
           R             R++++     +ELEVYNQGM KTELCNKWQETG CPYG HC+FAHG
Sbjct: 271 RVYVPAGCGSGSGKRDQDSEGGGDLELEVYNQGMFKTELCNKWQETGTCPYGDHCQFAHG 330

[Close]
BLAST of Cla011852 vs. NCBI nr
Match: gi|1009126224|ref|XP_015880036.1| (PREDICTED: zinc finger CCCH domain-containing protein 14 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 253.8 bits (647), Expect = 3.8e-64
Identity = 155/344 (45.06%), Postives = 207/344 (60.17%), Query Frame = 1 

Query: 11  SSLSSTTEVSADEMEDFSLHFASMYHSIFPPLLSSSSLPTSLSFTPSPSSSSADDDHNHH 70
           S+ S+    S +   DF   FASMY +IFPP     + P+SLS TPS + SS+       
Sbjct: 31  STYSNFPAPSQENGRDFGADFASMYRAIFPP-----NFPSSLSLTPSTTHSSS------- 90

Query: 71  CTTAATSATDDLLFQARLILEHRHLRHRHDLCLRRLRQVAEDADYLRQENAQLRLANAEL 130
           C     + T+  L QA LILE + LR   DLC   L ++ ++ +YLR+EN++LR AN EL
Sbjct: 91  CGEDEAAVTEHRLNQACLILECQELRDGFDLCRANLHEITKEVEYLRRENSELRSANTEL 150

Query: 131 VKVISSKTAVDDLI---SIPN-----SHLRSLIG--------GGEEIGYDIISPTSVIGK 190
           VK++SS+T    ++   S PN     +  R  IG        G EE+    ISPTSV+  
Sbjct: 151 VKLLSSQTTFQSVLLSSSYPNRSFMQNFRRLNIGGTTAPNAHGSEEVSN--ISPTSVM-- 210

Query: 191 YNDQFDGTNNFRRISLPKSISIRSA-------TAAAA---APLNIQSRGACT-PVSNGR- 250
            N++F   +N  RI+LPKSIS+RS+       +A+A+    P  I +R   T P+ +G  
Sbjct: 211 ENNRFQRRSNTERINLPKSISVRSSGYPKLNQSASASNVDGPSRISTRPQVTGPLVSGSV 270

Query: 251 ---------------SRNREEEA---VELEVYNQGMTKTELCNKWQETGGCPYGGHCRFA 309
                           R+++ E    +ELEVYNQGM KTELCNKWQETG CPYG HC+FA
Sbjct: 271 QQRVYVPAGCGSGSGKRDQDSEGGGDLELEVYNQGMFKTELCNKWQETGTCPYGDHCQFA 330

The following BLAST results are available for this feature:
BLAST of Cla011852 vs. Swiss-Prot
Match NameE-valueIdentityDescription
C3H14_ARATH3.2e-5541.14Zinc finger CCCH domain-containing protein 14 OS=Arabidopsis thaliana GN=At1g668... [more]
C3H9_ORYSJ1.1e-5042.91Zinc finger CCCH domain-containing protein 9 OS=Oryza sativa subsp. japonica GN=... [more]
C3H15_ARATH3.4e-4941.75Zinc finger CCCH domain-containing protein 15 OS=Arabidopsis thaliana GN=At1g682... [more]
C3H39_ORYSJ1.3e-4539.67Zinc finger CCCH domain-containing protein 39 OS=Oryza sativa subsp. japonica GN... [more]
C3H21_ORYSJ1.5e-3336.07Putative zinc finger CCCH domain-containing protein 21 OS=Oryza sativa subsp. ja... [more]
BLAST of Cla011852 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQS7_CUCSA2.9e-14885.30Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404980 PE=4 SV=1[more]
A0A059BTI7_EUCGR4.5e-6445.34Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02796 PE=4 SV=1[more]
W9S101_9ROSA2.9e-6345.53Zinc finger CCCH domain-containing protein 14 OS=Morus notabilis GN=L484_027093 ... [more]
M5WWD3_PRUPE4.6e-6145.94Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018479mg PE=4 SV=1[more]
A0A061EGU1_THECC2.5e-5946.42Zinc finger protein, putative OS=Theobroma cacao GN=TCM_019357 PE=4 SV=1[more]
BLAST of Cla011852 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449442060|ref|XP_004138800.1|4.2e-14885.30PREDICTED: zinc finger CCCH domain-containing protein 14-like [Cucumis sativus][more]
gi|700208028|gb|KGN63147.1|4.2e-14885.30hypothetical protein Csa_2G404980 [Cucumis sativus][more]
gi|659081374|ref|XP_008441301.1|9.4e-14886.03PREDICTED: zinc finger CCCH domain-containing protein 14-like [Cucumis melo][more]
gi|1009126226|ref|XP_015880037.1|9.9e-6545.32PREDICTED: zinc finger CCCH domain-containing protein 14 isoform X2 [Ziziphus ju... [more]
gi|1009126224|ref|XP_015880036.1|3.8e-6445.06PREDICTED: zinc finger CCCH domain-containing protein 14 isoform X1 [Ziziphus ju... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0050794 regulation of cellular process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla011852Cla011852.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeGENE3DG3DSA:4.10.1000.10coord: 236..273
score: 5.5E-17coord: 274..307
score: 7.7
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 242..266
score: 8.6
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 278..305
score: 2.7E-4coord: 240..267
score: 4.
IPR000571Zinc finger, CCCH-typePROFILEPS50103ZF_C3H1coord: 278..306
score: 13.544coord: 240..268
score: 15
IPR000571Zinc finger, CCCH-typeunknownSSF90229CCCH zinc fingercoord: 237..272
score: 2.22E-10coord: 275..306
score: 3.6
NoneNo IPR availablePANTHERPTHR12547CCCH ZINC FINGER/TIS11-RELATEDcoord: 16..308
score: 1.6
NoneNo IPR availablePANTHERPTHR12547:SF60ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14-RELATEDcoord: 16..308
score: 1.6