Cp4.1LG01g23010 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g23010
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	SNARE-like superfamily protein, putative
Location	Cp4.1LG01 : 19823276 .. 19824016 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTCGAATCCAGATCTTGTGTTCTATGCCTGCATTGCAAGAGGAACTGTAATCCTTGCTGAATTCAATCGAGAGCCGAATCTCAATGATTTGGCTTTCAGATGCATCGAGAAAGCTCCTCCTCATCACTCAACCTTCTCTCATACCGTCAGAAACAGAGTGTACACCTTTTTGATCGAAGGTCCCTTCGTTTATTTTGGAATCTTCCATGAGGACCTTTTCAAATCGGAGGTTTGTGGTTTCTTAAACCGCTTAAGGCGAGCTTTCGAGGAGTTCATCGAAAGCGAATTACGCAAGGGTTTCGAGAATTTCACCTCTAATTGCTTTCAATCGCAGTTCGATTCGATTTTCCGGCGTATCCTAACGTCGAATCAGGACCAGACGTCGTCGGGCTTGGATTCAGATAAAAGAAAGAAGACATCGCTTATTTCGAAGTTCTCGAAACCCTGTAGCCTAATGAAGAAGAAGAAGAAAGTGGTTGGAGATGCTAATAGCGAAGAGGGAAAATACGCATCAACTGTGGATGATTCTGTGGATCTGTATGACGATAACAATGGTTTATGCAGTAGAGATATCACATTGCTGATGCAAAAGAATGGTTCATATGAGCGTCAGAAAGCAAAGCAAATATGGCGGAAGCATGTTTGGGTTGTTCTGTCCATCGACTTGTTTGTATGTCTGGTTTTGTTCGCCATATGGCTTTGGGTTTGCAGTGGCTTTCAGTGCATTGAGAGCTGA

mRNA sequence

ATGGTTTCGAATCCAGATCTTGTGTTCTATGCCTGCATTGCAAGAGGAACTGTAATCCTTGCTGAATTCAATCGAGAGCCGAATCTCAATGATTTGGCTTTCAGATGCATCGAGAAAGCTCCTCCTCATCACTCAACCTTCTCTCATACCGTCAGAAACAGAGTGTACACCTTTTTGATCGAAGGTCCCTTCGTTTATTTTGGAATCTTCCATGAGGACCTTTTCAAATCGGAGGTTTGTGGTTTCTTAAACCGCTTAAGGCGAGCTTTCGAGGAGTTCATCGAAAGCGAATTACGCAAGGGTTTCGAGAATTTCACCTCTAATTGCTTTCAATCGCAGTTCGATTCGATTTTCCGGCGTATCCTAACGTCGAATCAGGACCAGACGTCGTCGGGCTTGGATTCAGATAAAAGAAAGAAGACATCGCTTATTTCGAAGTTCTCGAAACCCTGTAGCCTAATGAAGAAGAAGAAGAAAGTGGTTGGAGATGCTAATAGCGAAGAGGGAAAATACGCATCAACTGTGGATGATTCTGTGGATCTGTATGACGATAACAATGGTTTATGCAGTAGAGATATCACATTGCTGATGCAAAAGAATGGTTCATATGAGCGTCAGAAAGCAAAGCAAATATGGCGGAAGCATGTTTGGGTTGTTCTGTCCATCGACTTGTTTGTATGTCTGGTTTTGTTCGCCATATGGCTTTGGGTTTGCAGTGGCTTTCAGTGCATTGAGAGCTGA

Coding sequence (CDS)

ATGGTTTCGAATCCAGATCTTGTGTTCTATGCCTGCATTGCAAGAGGAACTGTAATCCTTGCTGAATTCAATCGAGAGCCGAATCTCAATGATTTGGCTTTCAGATGCATCGAGAAAGCTCCTCCTCATCACTCAACCTTCTCTCATACCGTCAGAAACAGAGTGTACACCTTTTTGATCGAAGGTCCCTTCGTTTATTTTGGAATCTTCCATGAGGACCTTTTCAAATCGGAGGTTTGTGGTTTCTTAAACCGCTTAAGGCGAGCTTTCGAGGAGTTCATCGAAAGCGAATTACGCAAGGGTTTCGAGAATTTCACCTCTAATTGCTTTCAATCGCAGTTCGATTCGATTTTCCGGCGTATCCTAACGTCGAATCAGGACCAGACGTCGTCGGGCTTGGATTCAGATAAAAGAAAGAAGACATCGCTTATTTCGAAGTTCTCGAAACCCTGTAGCCTAATGAAGAAGAAGAAGAAAGTGGTTGGAGATGCTAATAGCGAAGAGGGAAAATACGCATCAACTGTGGATGATTCTGTGGATCTGTATGACGATAACAATGGTTTATGCAGTAGAGATATCACATTGCTGATGCAAAAGAATGGTTCATATGAGCGTCAGAAAGCAAAGCAAATATGGCGGAAGCATGTTTGGGTTGTTCTGTCCATCGACTTGTTTGTATGTCTGGTTTTGTTCGCCATATGGCTTTGGGTTTGCAGTGGCTTTCAGTGCATTGAGAGCTGA

Protein sequence

MVSNPDLVFYACIARGTVILAEFNREPNLNDLAFRCIEKAPPHHSTFSHTVRNRVYTFLIEGPFVYFGIFHEDLFKSEVCGFLNRLRRAFEEFIESELRKGFENFTSNCFQSQFDSIFRRILTSNQDQTSSGLDSDKRKKTSLISKFSKPCSLMKKKKKVVGDANSEEGKYASTVDDSVDLYDDNNGLCSRDITLLMQKNGSYERQKAKQIWRKHVWVVLSIDLFVCLVLFAIWLWVCSGFQCIES

Homology

[Close]

BLAST of Cp4.1LG01g23010 vs. Swiss-Prot
Match: PHL22_ARATH (Phytolongin Phyl2.2 OS=Arabidopsis thaliana GN=PHYL2.2 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.4e-45
Identity = 112/277 (40.43%), Postives = 156/277 (56.32%), Query Frame = 1


Query: 1   MVSNPDLVFYACIARGTVILAEF--NREPNLNDLAFRCIEKAPPHHSTFSHTVRNRVYTF 60
           M+SNP L+ Y CIA+GTV+LAEF   +EP +  +A RCIE  PPHHS FSHTV  + YTF
Sbjct: 1   MISNPSLLSYTCIAKGTVVLAEFVSRQEPGIEAIALRCIENTPPHHSMFSHTVHKKTYTF 60

Query: 61  LIEGP-FVYFGIFHEDLFKSEVCGFLNRLRRAFEEFIE---SELRKGFENFTSNCFQSQF 120
            I+   FVYF I  E + K E    LNRLR A E+ I+   S++     N  S+C Q + 
Sbjct: 61  AIDDDSFVYFSISDESMEKPESFWVLNRLRSAIEDLIKDGGSDVET-LINPVSHCLQLKL 120

Query: 121 DSIFRRIL-----------------TSNQDQTSSGLDSDKRKKTSLISKFSKPCSLMKKK 180
           D +F  I+                 +  ++  +  +DS K ++ +L+    KP   +KKK
Sbjct: 121 DPVFAEIVGVVDLELLDMDLVGSPRSVARESRNPSIDSSKGRRAALMPLLGKPLKALKKK 180

Query: 181 KKVVGDANS----EEGKYASTVDDSVDLYDD-NNGLCSRDITLLMQKNG----SYERQKA 240
           K++  +A      E G      + +VDL  + NNG+  +++     +NG     + RQKA
Sbjct: 181 KRLHNEAKGGDSCEVGSIQEISEKNVDLCGNGNNGVLRKEL-----RNGLLSDHHHRQKA 240

Query: 241 KQIWRKHVWVVLSIDLFVCLVLFAIWLWVCSGFQCIE 246
           KQIW+KHVWVVL  D  +C VLF IWLW+C GFQCI+
Sbjct: 241 KQIWKKHVWVVLMFDFCICAVLFGIWLWICEGFQCIQ 271

[Close]

BLAST of Cp4.1LG01g23010 vs. Swiss-Prot
Match: PHL21_ARATH (Phytolongin Phyl2.1 OS=Arabidopsis thaliana GN=PHYL2.1 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.4e-45
Identity = 113/269 (42.01%), Postives = 143/269 (53.16%), Query Frame = 1


Query: 1   MVSNPDLVFYACIARGTVILAEF--NREPNLNDLAFRCIEKAPPHHSTFSHTVRNRVYTF 60
           M SN  ++FY+CIA+GTVILAEF    EP + DLA RCIE  PPHHS  SHTV  R Y  
Sbjct: 1   MTSNQRMLFYSCIAKGTVILAEFASKEEPGIEDLALRCIENVPPHHSMISHTVHKRTYAL 60

Query: 61  LIEGPFVYFGIFHEDLFKSEVCGFLNRLRRAFEEFIES-ELRKGFENFTSNCFQSQFDSI 120
           +I+G F YF I  E + KSE     NRL+ A E  +E        +N T +C QS+ D +
Sbjct: 61  IIDGLFSYFAILDEVVAKSESVWLFNRLKSATESLMEDGSTADSLDNPTQHCLQSKLDPV 120

Query: 121 FRRILT----SNQD----------------QTSSGLDSDK-RKKTSLISKFSKPCSLMKK 180
           F  I       N+D                  +  LDS K RK  +L+    KP  ++K 
Sbjct: 121 FAEIAAIGGNHNKDLELEFGSPRSIAREIKSNNQSLDSSKGRKGGALMPLLGKPLRVLKN 180

Query: 181 KKKVVGDANSEEGKYASTVDDSVDLYDDNNGLCSRDITLLMQKNGSYERQKAKQIWRKHV 240
           KK++  +A SE       +D         NGL           +  + RQKAKQIWRKHV
Sbjct: 181 KKRLQTEAKSEGHWNEKKMDLGGGGKGVRNGLI----------HDHHHRQKAKQIWRKHV 240

Query: 241 WVVLSIDLFVCLVLFAIWLWVCSGFQCIE 246
           W+VL  DL +CLVLF IWLW+C GFQCI+
Sbjct: 241 WIVLMFDLCICLVLFGIWLWICQGFQCID 259

[Close]

BLAST of Cp4.1LG01g23010 vs. Swiss-Prot
Match: PHL11_ARATH (Phytolongin Phyl1.1 OS=Arabidopsis thaliana GN=PHYL1.1 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.6e-19
Identity = 75/250 (30.00%), Postives = 113/250 (45.20%), Query Frame = 1


Query: 8   VFYACIARGTVILAEFNREPNLND-LAFRCIEKAPPHHSTFSHTVRNRVYTFLIEGPFVY 67
           V Y C++R   IL  +N     N+ LA  C+EK+PP H+ +  T+  R + FLI   FVY
Sbjct: 8   VHYCCVSRDNQILYSYNGGDQTNESLAALCLEKSPPFHTWYFETIGKRRFGFLIGDGFVY 67

Query: 68  FGIFHEDLFKSEVCGFLNRLRRAFEEFIESELRKGFENFTSNC-FQSQFDSIFRRIL--- 127
           F I  E L +S V  FL  LR  F++      R  F     +   + Q   +  R++   
Sbjct: 68  FAIVDEVLKRSSVLKFLEHLRDEFKKAARENSRGSFTAMIGSINVEDQLVPVVTRLIASL 127

Query: 128 ------TSNQDQTSSGLDSDKRKKTSLISKFSKPCSLMKKKKKVVGDANSEEGKYASTVD 187
                 +SN +  SS L        S  +      S  +KKK        EE + ++   
Sbjct: 128 ERVAESSSNNELKSSNLGEQSEGSNSTKAPLLGRLSKQEKKKGKDHVIELEEHRKSN--- 187

Query: 188 DSVDLYDDNNGLCSRDITLLMQKNGSYERQKAKQIWRKHVWVVLSIDLFVCLVLFAIWLW 247
           D  ++ DD+ G  +      +  +G    Q  +  WR+ V +VL+ID  +CL LF IWL 
Sbjct: 188 DRGNITDDSAGAGTSLEKECVSSSGRSVTQSFEWKWRRLVQIVLAIDAAICLTLFGIWLA 247

[Close]

BLAST of Cp4.1LG01g23010 vs. Swiss-Prot
Match: PHL12_ARATH (Phytolongin Phyl1.2 OS=Arabidopsis thaliana GN=PHYL1.2 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-17
Identity = 78/257 (30.35%), Postives = 115/257 (44.75%), Query Frame = 1


Query: 1   MVSNPDLVFYACIARGTVILAEFNR---EPNLNDLAFRCIEKAPPHHSTFSHTVRNRVYT 60
           M S  + V Y C++R   I+  +N      N   LA  C+EK PP H  +  T   + + 
Sbjct: 1   MGSIQNTVHYCCVSRDNQIMYAYNNAGDHRNNESLAALCLEKTPPFHKWYFETRGKKTFG 60

Query: 61  FLIEGPFVYFGIFHEDLFKSEVCGFLNRLRRAFEEFIESELRKGFENFTSNCFQSQFDSI 120
           FL++  FVYF I  +   KS V  FL +LR   +E  +   R  F    S  F +  D I
Sbjct: 61  FLMKDDFVYFAIVDDVFKKSSVLDFLEKLRDELKEANKKNSRGSFSGSIS--FSNVQDQI 120

Query: 121 FRRILTSNQ-DQTSSGLDSDK--RKKTSLISKFSKPC---SLMKKKKKVVGDANSEEGKY 180
            RR++ S + D T   L S      + S  S    P    S  + KKK    A+S  G  
Sbjct: 121 VRRLIASLEFDHTCLPLSSPSIDGAEQSYASNSKAPLLGRSNKQDKKKGRDHAHSLRGIE 180

Query: 181 ASTVDDSVDL--YDDNNGLCSRDITLLMQKNGSYERQKAKQIWRKHVWVVLSIDLFVCLV 240
                 S D     + +   S   T + ++  S   Q  ++ WR+ V +VL+ID+ +CL 
Sbjct: 181 IEEHRKSNDRGNVTECSNASSESATYVPRRGRSGGSQSIERKWRRQVKIVLAIDIAICLT 240

Query: 241 LFAIWLWVCSGFQCIES 247
           L  +WL +C G +C  S
Sbjct: 241 LLGVWLAICHGIECTRS 255

[Close]

BLAST of Cp4.1LG01g23010 vs. TrEMBL
Match: A0A0A0KX86_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G633190 PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 2.5e-78
Identity = 155/214 (72.43%), Postives = 171/214 (79.91%), Query Frame = 1


Query: 1   MVSNPDLVFYACIARGTVILAEFNREPNLNDLAFRCIEKAPPHHSTFSHTVRNRVYTFLI 60
           MVSNPDLV Y+CIARGT+ILAEF REPNL+DL FRCIEK PPHHS FSHT+RNR YTFLI
Sbjct: 1   MVSNPDLVLYSCIARGTIILAEFTREPNLDDLPFRCIEKTPPHHSIFSHTIRNRAYTFLI 60

Query: 61  EGPFVYFGIFHEDLFKSEVCGFLNRLRRAFEEFIESELRKGFENFTSNCFQSQFDSIFRR 120
           EG FVYFGIFHEDL KSEV GFLNRL+R FE F+ESE  KGFENFTS+CFQS FDS FR 
Sbjct: 61  EGSFVYFGIFHEDLNKSEVSGFLNRLKRDFEVFLESESLKGFENFTSHCFQSHFDSSFRH 120

Query: 121 ILTSNQDQTS---------SGLDSDKRKKTSLISKFSKPCSLMKKKKKVVGDANSEEGKY 180
           +L  N ++TS         S LDS  RK+  L+SKFS P SLMKKKKKV GD N + GKY
Sbjct: 121 LLGLNLNKTSSNGLKGSQRSSLDSSLRKQIPLVSKFSNPGSLMKKKKKVTGDGNWDGGKY 180

Query: 181 ASTVDDSVDLYDDNNGLCSRDITLLMQKNGSYER 206
              +DDSVDLYDDNNGLCSRDITLLMQK+GS+ R
Sbjct: 181 G--MDDSVDLYDDNNGLCSRDITLLMQKHGSHNR 212

[Close]

BLAST of Cp4.1LG01g23010 vs. TrEMBL
Match: M5X3G7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010273mg PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.3e-62
Identity = 134/256 (52.34%), Postives = 172/256 (67.19%), Query Frame = 1


Query: 1   MVSNPDLVFYACIARGTVILAEFNREPNLNDLAFRCIEKAPPHHSTFSHTVRNRVYTFLI 60
           M+SNP+L++YACIA  T I+ EF++EP L  LA +CIE  PPHHS ++HTVR R YTFLI
Sbjct: 1   MISNPNLIYYACIAHKTTIIGEFSKEPGLGALAQQCIEITPPHHSMYTHTVRKRTYTFLI 60

Query: 61  EGPFVYFGIFHEDLFKSEVCGFLNRLRRAFEEFIESELRKGFENFTSNCFQSQFDSIFRR 120
             PFVYF IF +DL +SE   FLNRL+  FEE   S      +N+ S+CFQ+QFDSI R+
Sbjct: 61  HDPFVYFAIFDDDLDQSEALSFLNRLKCDFEEANGSGSILVRDNYASHCFQAQFDSIIRK 120

Query: 121 ILTSNQDQTSS-------GLDSDKRKKTSLISKFSKPCSL-MKKKKKVVGDANSEEGKYA 180
           I+ S+ +  +S        L S K KK  L     K  S  +KKKK++ G+ N + GK  
Sbjct: 121 IMASDLELPNSPPASRNLSLSSSKGKKLVLTPLLGKKTSEGLKKKKRLSGELNGDAGKDV 180

Query: 181 STVDDSVDLYDDNNGLCSRDITLLMQKNG---SYERQKAKQIWRKHVWVVLSIDLFVCLV 240
           +T++  VD+ DD NG   RD +L  QKNG   S +RQKAKQ+WRKHVWVVL +DLFVC +
Sbjct: 181 TTMEKKVDVCDDVNG-GFRDFSLQTQKNGPLLSGDRQKAKQVWRKHVWVVLMLDLFVCAI 240

Query: 241 LFAIWLWVCSGFQCIE 246
           LF IWLWVC GF+CI+
Sbjct: 241 LFGIWLWVCRGFKCID 255

[Close]

BLAST of Cp4.1LG01g23010 vs. TrEMBL
Match: W9SA15_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011875 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.2e-58
Identity = 134/262 (51.15%), Postives = 169/262 (64.50%), Query Frame = 1


Query: 1   MVSNPDLVFYACIARGTVILAEFNREPNLNDLAFRCIEKAPPHHSTFSHTVRNRVYTFLI 60
           M+SNPDL+ YACIAR   ILAEF R P+L DLA RCIEK PP+HS F HTVR R YTFLI
Sbjct: 1   MISNPDLIHYACIARKATILAEFARHPDLEDLARRCIEKTPPYHSMFCHTVRGRTYTFLI 60

Query: 61  EGPFVYFGIFHEDLFKSEVCGFLNRLRRAFEEFIESELRKGFENFTSNCFQSQFDSIFRR 120
           +   VYF I  +DL +SE   FLNR++ AFEE      ++  ENF  + FQ +FDSI R 
Sbjct: 61  DDVSVYFAITDQDLEQSECLWFLNRVKSAFEETARGGSKRRSENFVYHSFQPEFDSIVRE 120

Query: 121 ILTSNQDQTSS-----------GLDSDKRKKTSLISKFS-KPCS-LMKKKKKVVGDANSE 180
           I+  + +  +S            LD  + +  +       K C+ L KKKK++ G+AN +
Sbjct: 121 IMALDSNSVNSTPSLSNVSQNPSLDGSRGQSMAFRPLLGVKLCNGLKKKKKRLSGEANGD 180

Query: 181 EGKYASTVDDSVDLYDDNNGLCSRDITLLMQKNGS---YERQKAKQIWRKHVWVVLSIDL 240
            GK  ST++++VD+YDD N    RD    MQKN S    +RQKAKQ+WRKHVWVVL +DL
Sbjct: 181 LGK-DSTMENAVDVYDDIN----RDFVSSMQKNISPYAGDRQKAKQVWRKHVWVVLLLDL 240

Query: 241 FVCLVLFAIWLWVCSGFQCIES 247
           FVC +LF IWLWVC GF+CIES
Sbjct: 241 FVCAILFGIWLWVCRGFKCIES 257

[Close]

BLAST of Cp4.1LG01g23010 vs. TrEMBL
Match: A0A061G2G4_THECC (SNARE-like superfamily protein, putative OS=Theobroma cacao GN=TCM_015425 PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 5.0e-58
Identity = 133/264 (50.38%), Postives = 169/264 (64.02%), Query Frame = 1


Query: 1   MVSNPDLVFYACIARGTVILAEFN-REPNLNDLAFRCIEKAPPHHSTFSHTVRNRVYTFL 60
           M+SNP+L+FYACIA+G  ILAEF+ +E  +  LA +CIEK PP HS FSHTV  R YTFL
Sbjct: 1   MISNPNLIFYACIAKGPTILAEFSSKEEGIKSLAQKCIEKTPPFHSMFSHTVSKRTYTFL 60

Query: 61  IEGPFVYFGIFHEDLFKSEVCGFLNRLRRAFEEFIESELRKGFENFTSNCFQSQFDSIFR 120
           I+GPF YF IFHEDL KSE   FLNRL+ AFE+F+E+ L  G +N T  C QS FD IF 
Sbjct: 61  IDGPFAYFIIFHEDLEKSESFWFLNRLKCAFEDFLETGLIVGTDNMTPTCLQSYFDPIFS 120

Query: 121 RILTSNQDQTSS--------GLDSDKRKKTSLISKFSKPCSLMKKKKKVVG-DANSEEGK 180
            I+  + +  +S         LDS+K K T++      P   +KKKK++ G + N  E K
Sbjct: 121 EIMALDMELVTSPSKESQDPSLDSNKGKGTAVAPLLGSPSKGLKKKKRLSGLEVNGGEAK 180

Query: 181 YAS---TVDDSVDLYDDNNGLCSRDITLLMQKN------GSYERQKAKQIWRKHVWVVLS 240
            A     +++ VD+ DD      RD  + MQK+      G  +RQKAKQ+WRKHVWVVL 
Sbjct: 181 DAGGGIGMENKVDVADD-----FRDFPVSMQKSVGCYYMGGGDRQKAKQLWRKHVWVVLI 240

Query: 241 IDLFVCLVLFAIWLWVCSGFQCIE 246
           +DL VC+ LF IWL VC GFQCI+
Sbjct: 241 LDLVVCVTLFGIWLMVCRGFQCID 259

[Close]

BLAST of Cp4.1LG01g23010 vs. TrEMBL
Match: B9RSE2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1241880 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.0e-55
Identity = 132/280 (47.14%), Postives = 170/280 (60.71%), Query Frame = 1


Query: 1   MVSNPDLVFYACIARGTVILAEF--NREPNLNDLAFRCIEKAPPHHSTFSHTVRNRVYTF 60
           M+SNPDL+FYACI++G   LAEF  ++EP + D+A RCIE+ PP HSTFSHTVR + YTF
Sbjct: 1   MISNPDLIFYACISKGPTTLAEFTSSKEPGIEDIAKRCIERTPPLHSTFSHTVRRKTYTF 60

Query: 61  LIEGPFVYFGIFHEDLFKSEVCGFLNRLRRAFEEFIESELRKGFENFTSNCFQSQFDSIF 120
           LI  P  YF I HE L KSE   FLNR++ AFEEF  +   K F+  T NCFQ QF  IF
Sbjct: 61  LINDPVAYFVISHESLEKSECFWFLNRVKIAFEEFSGANPVKDFDELTYNCFQEQFCPIF 120

Query: 121 RRILTSN-----------QDQTSSGLDSDKRKKTSLISKFSKPCSLMKKKKK-------- 180
           R IL+ N           +D  +  LDS + K++ +    SKP  LM KKKK        
Sbjct: 121 RNILSLNVELVDSLMEVPKDIRNPSLDSTRGKRSVVRPLLSKPAKLMMKKKKRQALGCAG 180

Query: 181 VVGDANSEEGKYASTVDDSVDLYDDN---------NGLCSRDITLLMQKNG-----SYER 240
            V D     G+ A+ VD++ +  ++N         N + +R+ ++ M KNG        R
Sbjct: 181 CVSDGGGGGGE-ANVVDNNNNNNNNNNYKVNHVGENVVVNREFSVSMHKNGGGFYMGDGR 240

Query: 241 QKAKQIWRKHVWVVLSIDLFVCLVLFAIWLWVCSGFQCIE 246
           QKAKQIWRKHVWVVL +DL +C VLF IWLW+C GF+CI+
Sbjct: 241 QKAKQIWRKHVWVVLILDLVICAVLFGIWLWICRGFKCID 279

[Close]

BLAST of Cp4.1LG01g23010 vs. TAIR10
Match: AT4G27840.1 (AT4G27840.1 SNARE-like superfamily protein)

HSP 1 Score: 184.5 bits (467), Expect = 7.9e-47
Identity = 113/269 (42.01%), Postives = 143/269 (53.16%), Query Frame = 1


Query: 1   MVSNPDLVFYACIARGTVILAEF--NREPNLNDLAFRCIEKAPPHHSTFSHTVRNRVYTF 60
           M SN  ++FY+CIA+GTVILAEF    EP + DLA RCIE  PPHHS  SHTV  R Y  
Sbjct: 1   MTSNQRMLFYSCIAKGTVILAEFASKEEPGIEDLALRCIENVPPHHSMISHTVHKRTYAL 60

Query: 61  LIEGPFVYFGIFHEDLFKSEVCGFLNRLRRAFEEFIES-ELRKGFENFTSNCFQSQFDSI 120
           +I+G F YF I  E + KSE     NRL+ A E  +E        +N T +C QS+ D +
Sbjct: 61  IIDGLFSYFAILDEVVAKSESVWLFNRLKSATESLMEDGSTADSLDNPTQHCLQSKLDPV 120

Query: 121 FRRILT----SNQD----------------QTSSGLDSDK-RKKTSLISKFSKPCSLMKK 180
           F  I       N+D                  +  LDS K RK  +L+    KP  ++K 
Sbjct: 121 FAEIAAIGGNHNKDLELEFGSPRSIAREIKSNNQSLDSSKGRKGGALMPLLGKPLRVLKN 180

Query: 181 KKKVVGDANSEEGKYASTVDDSVDLYDDNNGLCSRDITLLMQKNGSYERQKAKQIWRKHV 240
           KK++  +A SE       +D         NGL           +  + RQKAKQIWRKHV
Sbjct: 181 KKRLQTEAKSEGHWNEKKMDLGGGGKGVRNGLI----------HDHHHRQKAKQIWRKHV 240

Query: 241 WVVLSIDLFVCLVLFAIWLWVCSGFQCIE 246
           W+VL  DL +CLVLF IWLW+C GFQCI+
Sbjct: 241 WIVLMFDLCICLVLFGIWLWICQGFQCID 259

[Close]

BLAST of Cp4.1LG01g23010 vs. TAIR10
Match: AT5G52990.1 (AT5G52990.1 SNARE-like superfamily protein)

HSP 1 Score: 184.5 bits (467), Expect = 7.9e-47
Identity = 112/277 (40.43%), Postives = 156/277 (56.32%), Query Frame = 1


Query: 1   MVSNPDLVFYACIARGTVILAEF--NREPNLNDLAFRCIEKAPPHHSTFSHTVRNRVYTF 60
           M+SNP L+ Y CIA+GTV+LAEF   +EP +  +A RCIE  PPHHS FSHTV  + YTF
Sbjct: 1   MISNPSLLSYTCIAKGTVVLAEFVSRQEPGIEAIALRCIENTPPHHSMFSHTVHKKTYTF 60

Query: 61  LIEGP-FVYFGIFHEDLFKSEVCGFLNRLRRAFEEFIE---SELRKGFENFTSNCFQSQF 120
            I+   FVYF I  E + K E    LNRLR A E+ I+   S++     N  S+C Q + 
Sbjct: 61  AIDDDSFVYFSISDESMEKPESFWVLNRLRSAIEDLIKDGGSDVET-LINPVSHCLQLKL 120

Query: 121 DSIFRRIL-----------------TSNQDQTSSGLDSDKRKKTSLISKFSKPCSLMKKK 180
           D +F  I+                 +  ++  +  +DS K ++ +L+    KP   +KKK
Sbjct: 121 DPVFAEIVGVVDLELLDMDLVGSPRSVARESRNPSIDSSKGRRAALMPLLGKPLKALKKK 180

Query: 181 KKVVGDANS----EEGKYASTVDDSVDLYDD-NNGLCSRDITLLMQKNG----SYERQKA 240
           K++  +A      E G      + +VDL  + NNG+  +++     +NG     + RQKA
Sbjct: 181 KRLHNEAKGGDSCEVGSIQEISEKNVDLCGNGNNGVLRKEL-----RNGLLSDHHHRQKA 240

Query: 241 KQIWRKHVWVVLSIDLFVCLVLFAIWLWVCSGFQCIE 246
           KQIW+KHVWVVL  D  +C VLF IWLW+C GFQCI+
Sbjct: 241 KQIWKKHVWVVLMFDFCICAVLFGIWLWICEGFQCIQ 271

[Close]

BLAST of Cp4.1LG01g23010 vs. TAIR10
Match: AT4G10170.1 (AT4G10170.1 SNARE-like superfamily protein)

HSP 1 Score: 95.5 bits (236), Expect = 4.8e-20
Identity = 75/250 (30.00%), Postives = 113/250 (45.20%), Query Frame = 1


Query: 8   VFYACIARGTVILAEFNREPNLND-LAFRCIEKAPPHHSTFSHTVRNRVYTFLIEGPFVY 67
           V Y C++R   IL  +N     N+ LA  C+EK+PP H+ +  T+  R + FLI   FVY
Sbjct: 8   VHYCCVSRDNQILYSYNGGDQTNESLAALCLEKSPPFHTWYFETIGKRRFGFLIGDGFVY 67

Query: 68  FGIFHEDLFKSEVCGFLNRLRRAFEEFIESELRKGFENFTSNC-FQSQFDSIFRRIL--- 127
           F I  E L +S V  FL  LR  F++      R  F     +   + Q   +  R++   
Sbjct: 68  FAIVDEVLKRSSVLKFLEHLRDEFKKAARENSRGSFTAMIGSINVEDQLVPVVTRLIASL 127

Query: 128 ------TSNQDQTSSGLDSDKRKKTSLISKFSKPCSLMKKKKKVVGDANSEEGKYASTVD 187
                 +SN +  SS L        S  +      S  +KKK        EE + ++   
Sbjct: 128 ERVAESSSNNELKSSNLGEQSEGSNSTKAPLLGRLSKQEKKKGKDHVIELEEHRKSN--- 187

Query: 188 DSVDLYDDNNGLCSRDITLLMQKNGSYERQKAKQIWRKHVWVVLSIDLFVCLVLFAIWLW 247
           D  ++ DD+ G  +      +  +G    Q  +  WR+ V +VL+ID  +CL LF IWL 
Sbjct: 188 DRGNITDDSAGAGTSLEKECVSSSGRSVTQSFEWKWRRLVQIVLAIDAAICLTLFGIWLA 247

[Close]

BLAST of Cp4.1LG01g23010 vs. TAIR10
Match: AT1G33475.1 (AT1G33475.1 SNARE-like superfamily protein)

HSP 1 Score: 91.7 bits (226), Expect = 7.0e-19
Identity = 78/257 (30.35%), Postives = 115/257 (44.75%), Query Frame = 1


Query: 1   MVSNPDLVFYACIARGTVILAEFNR---EPNLNDLAFRCIEKAPPHHSTFSHTVRNRVYT 60
           M S  + V Y C++R   I+  +N      N   LA  C+EK PP H  +  T   + + 
Sbjct: 1   MGSIQNTVHYCCVSRDNQIMYAYNNAGDHRNNESLAALCLEKTPPFHKWYFETRGKKTFG 60

Query: 61  FLIEGPFVYFGIFHEDLFKSEVCGFLNRLRRAFEEFIESELRKGFENFTSNCFQSQFDSI 120
           FL++  FVYF I  +   KS V  FL +LR   +E  +   R  F    S  F +  D I
Sbjct: 61  FLMKDDFVYFAIVDDVFKKSSVLDFLEKLRDELKEANKKNSRGSFSGSIS--FSNVQDQI 120

Query: 121 FRRILTSNQ-DQTSSGLDSDK--RKKTSLISKFSKPC---SLMKKKKKVVGDANSEEGKY 180
            RR++ S + D T   L S      + S  S    P    S  + KKK    A+S  G  
Sbjct: 121 VRRLIASLEFDHTCLPLSSPSIDGAEQSYASNSKAPLLGRSNKQDKKKGRDHAHSLRGIE 180

Query: 181 ASTVDDSVDL--YDDNNGLCSRDITLLMQKNGSYERQKAKQIWRKHVWVVLSIDLFVCLV 240
                 S D     + +   S   T + ++  S   Q  ++ WR+ V +VL+ID+ +CL 
Sbjct: 181 IEEHRKSNDRGNVTECSNASSESATYVPRRGRSGGSQSIERKWRRQVKIVLAIDIAICLT 240

Query: 241 LFAIWLWVCSGFQCIES 247
           L  +WL +C G +C  S
Sbjct: 241 LLGVWLAICHGIECTRS 255

[Close]

BLAST of Cp4.1LG01g23010 vs. NCBI nr
Match: gi|659117640|ref|XP_008458710.1| (PREDICTED: probable VAMP-like protein At1g33475 [Cucumis melo])

HSP 1 Score: 384.0 bits (985), Expect = 1.9e-103
Identity = 198/257 (77.04%), Postives = 212/257 (82.49%), Query Frame = 1


Query: 1   MVSNPDLVFYACIARGTVILAEFNREPNLNDLAFRCIEKAPPHHSTFSHTVRNRVYTFLI 60
           MVSNPDLVFY+CIARGT+ILAEF REPNL+DL  RCIEKAPPHHS FSHT+RNR YTFLI
Sbjct: 1   MVSNPDLVFYSCIARGTIILAEFTREPNLDDLPLRCIEKAPPHHSIFSHTIRNRAYTFLI 60

Query: 61  EGPFVYFGIFHEDLFKSEVCGFLNRLRRAFEEFIESELRKGFENFTSNCFQSQFDSIFRR 120
           EG FVYFGIFHEDL KSEV GFLNRL+R FE F+ESE  KGFENFTS CFQSQFDS FR 
Sbjct: 61  EGSFVYFGIFHEDLNKSEVSGFLNRLKRDFEVFLESESLKGFENFTSYCFQSQFDSSFRH 120

Query: 121 ILTSNQDQTS---------SGLDSDKRKKTSLISKFSKPCSLMKKKKKVVGDANSEEGKY 180
           +L  N ++TS         S LDS  RK+  L+SKFS P SLMKKKKKV GD N E GKY
Sbjct: 121 LLGLNLNKTSSNGLMGSQRSSLDSSTRKQIPLVSKFSNPGSLMKKKKKVTGDGNWEGGKY 180

Query: 181 ASTVDDSVDLYDDNNGLCSRDITLLMQKNGSY--ERQKAKQIWRKHVWVVLSIDLFVCLV 240
              +DDSVDLYDDNNGLCSRDITLLMQKNGS+  ERQKAKQ+WRKHVWVVLSIDLFVCLV
Sbjct: 181 G--MDDSVDLYDDNNGLCSRDITLLMQKNGSHNSERQKAKQVWRKHVWVVLSIDLFVCLV 240

Query: 241 LFAIWLWVCSGFQCIES 247
           LF IWLWVC GFQCIES
Sbjct: 241 LFGIWLWVCRGFQCIES 255

[Close]

BLAST of Cp4.1LG01g23010 vs. NCBI nr
Match: gi|449461895|ref|XP_004148677.1| (PREDICTED: probable VAMP-like protein At1g33475 [Cucumis sativus])

HSP 1 Score: 378.3 bits (970), Expect = 1.1e-101
Identity = 194/257 (75.49%), Postives = 211/257 (82.10%), Query Frame = 1


Query: 1   MVSNPDLVFYACIARGTVILAEFNREPNLNDLAFRCIEKAPPHHSTFSHTVRNRVYTFLI 60
           MVSNPDLV Y+CIARGT+ILAEF REPNL+DL FRCIEK PPHHS FSHT+RNR YTFLI
Sbjct: 1   MVSNPDLVLYSCIARGTIILAEFTREPNLDDLPFRCIEKTPPHHSIFSHTIRNRAYTFLI 60

Query: 61  EGPFVYFGIFHEDLFKSEVCGFLNRLRRAFEEFIESELRKGFENFTSNCFQSQFDSIFRR 120
           EG FVYFGIFHEDL KSEV GFLNRL+R FE F+ESE  KGFENFTS+CFQS FDS FR 
Sbjct: 61  EGSFVYFGIFHEDLNKSEVSGFLNRLKRDFEVFLESESLKGFENFTSHCFQSHFDSSFRH 120

Query: 121 ILTSNQDQTS---------SGLDSDKRKKTSLISKFSKPCSLMKKKKKVVGDANSEEGKY 180
           +L  N ++TS         S LDS  RK+  L+SKFS P SLMKKKKKV GD N + GKY
Sbjct: 121 LLGLNLNKTSSNGLKGSQRSSLDSSLRKQIPLVSKFSNPGSLMKKKKKVTGDGNWDGGKY 180

Query: 181 ASTVDDSVDLYDDNNGLCSRDITLLMQKNGSY--ERQKAKQIWRKHVWVVLSIDLFVCLV 240
              +DDSVDLYDDNNGLCSRDITLLMQK+GS+  ERQKAKQ+WRKHVWVVLSIDLFVCLV
Sbjct: 181 G--MDDSVDLYDDNNGLCSRDITLLMQKHGSHNSERQKAKQVWRKHVWVVLSIDLFVCLV 240

Query: 241 LFAIWLWVCSGFQCIES 247
           LF IWLWVC GFQCIES
Sbjct: 241 LFGIWLWVCRGFQCIES 255

[Close]

BLAST of Cp4.1LG01g23010 vs. NCBI nr
Match: gi|700197244|gb|KGN52421.1| (hypothetical protein Csa_5G633190 [Cucumis sativus])

HSP 1 Score: 300.1 bits (767), Expect = 3.7e-78
Identity = 155/214 (72.43%), Postives = 171/214 (79.91%), Query Frame = 1


Query: 1   MVSNPDLVFYACIARGTVILAEFNREPNLNDLAFRCIEKAPPHHSTFSHTVRNRVYTFLI 60
           MVSNPDLV Y+CIARGT+ILAEF REPNL+DL FRCIEK PPHHS FSHT+RNR YTFLI
Sbjct: 1   MVSNPDLVLYSCIARGTIILAEFTREPNLDDLPFRCIEKTPPHHSIFSHTIRNRAYTFLI 60

Query: 61  EGPFVYFGIFHEDLFKSEVCGFLNRLRRAFEEFIESELRKGFENFTSNCFQSQFDSIFRR 120
           EG FVYFGIFHEDL KSEV GFLNRL+R FE F+ESE  KGFENFTS+CFQS FDS FR 
Sbjct: 61  EGSFVYFGIFHEDLNKSEVSGFLNRLKRDFEVFLESESLKGFENFTSHCFQSHFDSSFRH 120

Query: 121 ILTSNQDQTS---------SGLDSDKRKKTSLISKFSKPCSLMKKKKKVVGDANSEEGKY 180
           +L  N ++TS         S LDS  RK+  L+SKFS P SLMKKKKKV GD N + GKY
Sbjct: 121 LLGLNLNKTSSNGLKGSQRSSLDSSLRKQIPLVSKFSNPGSLMKKKKKVTGDGNWDGGKY 180

Query: 181 ASTVDDSVDLYDDNNGLCSRDITLLMQKNGSYER 206
              +DDSVDLYDDNNGLCSRDITLLMQK+GS+ R
Sbjct: 181 G--MDDSVDLYDDNNGLCSRDITLLMQKHGSHNR 212

[Close]

BLAST of Cp4.1LG01g23010 vs. NCBI nr
Match: gi|596015796|ref|XP_007218837.1| (hypothetical protein PRUPE_ppa010273mg [Prunus persica])

HSP 1 Score: 246.5 bits (628), Expect = 4.8e-62
Identity = 134/256 (52.34%), Postives = 172/256 (67.19%), Query Frame = 1


Query: 1   MVSNPDLVFYACIARGTVILAEFNREPNLNDLAFRCIEKAPPHHSTFSHTVRNRVYTFLI 60
           M+SNP+L++YACIA  T I+ EF++EP L  LA +CIE  PPHHS ++HTVR R YTFLI
Sbjct: 1   MISNPNLIYYACIAHKTTIIGEFSKEPGLGALAQQCIEITPPHHSMYTHTVRKRTYTFLI 60

Query: 61  EGPFVYFGIFHEDLFKSEVCGFLNRLRRAFEEFIESELRKGFENFTSNCFQSQFDSIFRR 120
             PFVYF IF +DL +SE   FLNRL+  FEE   S      +N+ S+CFQ+QFDSI R+
Sbjct: 61  HDPFVYFAIFDDDLDQSEALSFLNRLKCDFEEANGSGSILVRDNYASHCFQAQFDSIIRK 120

Query: 121 ILTSNQDQTSS-------GLDSDKRKKTSLISKFSKPCSL-MKKKKKVVGDANSEEGKYA 180
           I+ S+ +  +S        L S K KK  L     K  S  +KKKK++ G+ N + GK  
Sbjct: 121 IMASDLELPNSPPASRNLSLSSSKGKKLVLTPLLGKKTSEGLKKKKRLSGELNGDAGKDV 180

Query: 181 STVDDSVDLYDDNNGLCSRDITLLMQKNG---SYERQKAKQIWRKHVWVVLSIDLFVCLV 240
           +T++  VD+ DD NG   RD +L  QKNG   S +RQKAKQ+WRKHVWVVL +DLFVC +
Sbjct: 181 TTMEKKVDVCDDVNG-GFRDFSLQTQKNGPLLSGDRQKAKQVWRKHVWVVLMLDLFVCAI 240

Query: 241 LFAIWLWVCSGFQCIE 246
           LF IWLWVC GF+CI+
Sbjct: 241 LFGIWLWVCRGFKCID 255

[Close]

BLAST of Cp4.1LG01g23010 vs. NCBI nr
Match: gi|645258161|ref|XP_008234757.1| (PREDICTED: probable VAMP-like protein At1g33475 [Prunus mume])

HSP 1 Score: 246.1 bits (627), Expect = 6.3e-62
Identity = 134/256 (52.34%), Postives = 172/256 (67.19%), Query Frame = 1


Query: 1   MVSNPDLVFYACIARGTVILAEFNREPNLNDLAFRCIEKAPPHHSTFSHTVRNRVYTFLI 60
           M+SNP+L++YACIA  T I+ EF++EP L  LA +CIE  PPHHS ++HTVR R YTFLI
Sbjct: 1   MISNPNLIYYACIAHKTTIIGEFSKEPGLGALAQQCIEITPPHHSMYTHTVRKRTYTFLI 60

Query: 61  EGPFVYFGIFHEDLFKSEVCGFLNRLRRAFEEFIESELRKGFENFTSNCFQSQFDSIFRR 120
             PFVYF IF +DL +SE   FLNRL+  FEE   S      +N+ S+CFQ+QFDSI R+
Sbjct: 61  HDPFVYFAIFDDDLDQSEALSFLNRLKCDFEEANGSGSILVRDNYASHCFQAQFDSIIRK 120

Query: 121 ILTSNQDQTSS-------GLDSDKRKKTSLISKFSKPCSL-MKKKKKVVGDANSEEGKYA 180
           I+ S+ +  +S        L S K KK  L     K  S  +KKKK++ G+ N + GK  
Sbjct: 121 IMASDLELPNSPPASRNLSLSSSKGKKLVLTPLLGKKTSEGLKKKKRLSGELNGDVGKDV 180

Query: 181 STVDDSVDLYDDNNGLCSRDITLLMQKNG---SYERQKAKQIWRKHVWVVLSIDLFVCLV 240
           +T++  VD+ DD NG   RD +L  QKNG   S +RQKAKQ+WRKHVWVVL +DLFVC +
Sbjct: 181 TTMEKKVDVCDDVNG-GFRDFSLQTQKNGPLLSGDRQKAKQVWRKHVWVVLMLDLFVCAI 240

Query: 241 LFAIWLWVCSGFQCIE 246
           LF IWLWVC GF+CI+
Sbjct: 241 LFGIWLWVCRGFKCID 255

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g23010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PHL22_ARATH	1.4e-45	40.43	Phytolongin Phyl2.2 OS=Arabidopsis thaliana GN=PHYL2.2 PE=2 SV=1	[more]
PHL21_ARATH	1.4e-45	42.01	Phytolongin Phyl2.1 OS=Arabidopsis thaliana GN=PHYL2.1 PE=2 SV=1	[more]
PHL11_ARATH	8.6e-19	30.00	Phytolongin Phyl1.1 OS=Arabidopsis thaliana GN=PHYL1.1 PE=2 SV=1	[more]
PHL12_ARATH	1.2e-17	30.35	Phytolongin Phyl1.2 OS=Arabidopsis thaliana GN=PHYL1.2 PE=2 SV=1	[more]

BLAST of Cp4.1LG01g23010 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KX86_CUCSA	2.5e-78	72.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G633190 PE=3 SV=1	[more]
M5X3G7_PRUPE	3.3e-62	52.34	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010273mg PE=3 SV=1	[more]
W9SA15_9ROSA	2.2e-58	51.15	Uncharacterized protein OS=Morus notabilis GN=L484_011875 PE=3 SV=1	[more]
A0A061G2G4_THECC	5.0e-58	50.38	SNARE-like superfamily protein, putative OS=Theobroma cacao GN=TCM_015425 PE=3 S...	[more]
B9RSE2_RICCO	1.0e-55	47.14	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1241880 PE=3 SV=1	[more]

BLAST of Cp4.1LG01g23010 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G27840.1	7.9e-47	42.01	SNARE-like superfamily protein	[more]
AT5G52990.1	7.9e-47	40.43	SNARE-like superfamily protein	[more]
AT4G10170.1	4.8e-20	30.00	SNARE-like superfamily protein	[more]
AT1G33475.1	7.0e-19	30.35	SNARE-like superfamily protein	[more]

BLAST of Cp4.1LG01g23010 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659117640\|ref\|XP_008458710.1\|	1.9e-103	77.04	PREDICTED: probable VAMP-like protein At1g33475 [Cucumis melo]	[more]
gi\|449461895\|ref\|XP_004148677.1\|	1.1e-101	75.49	PREDICTED: probable VAMP-like protein At1g33475 [Cucumis sativus]	[more]
gi\|700197244\|gb\|KGN52421.1\|	3.7e-78	72.43	hypothetical protein Csa_5G633190 [Cucumis sativus]	[more]
gi\|596015796\|ref\|XP_007218837.1\|	4.8e-62	52.34	hypothetical protein PRUPE_ppa010273mg [Prunus persica]	[more]
gi\|645258161\|ref\|XP_008234757.1\|	6.3e-62	52.34	PREDICTED: probable VAMP-like protein At1g33475 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport

Vocabulary: **INTERPRO**
Term	Definition
IPR011012	Longin-like_dom_sf
IPR010908	Longin_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g23010.1	Cp4.1LG01g23010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010908	Longin domain	GENE3D	G3DSA:3.30.450.50		coord: 6..119 score: 2.8
IPR011012	Longin-like domain	unknown	SSF64356	SNARE-like	coord: 8..117 score: 6.87
None	No IPR available	PANTHER	PTHR21136	SNARE PROTEINS	coord: 141..245 score: 9.2E-85coord: 1..114 score: 9.2
None	No IPR available	PANTHER	PTHR21136:SF93	VESICLE-ASSOCIATED MEMBRANE PROTEIN-LIKE PROTEIN	coord: 141..245 score: 9.2E-85coord: 1..114 score: 9.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g23010	Cucsa.158680	Cucumber (Gy14) v1	cgycpeB0425
Cp4.1LG01g23010	CmaCh15G003000	Cucurbita maxima (Rimu)	cmacpeB317
Cp4.1LG01g23010	CmaCh04G027380	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g23010	Cla010362	Watermelon (97103) v1	cpewmB381
Cp4.1LG01g23010	Csa5G633190	Cucumber (Chinese Long) v2	cpecuB415
Cp4.1LG01g23010	MELO3C021488	Melon (DHL92) v3.5.1	cpemeB358
Cp4.1LG01g23010	ClCG09G018560	Watermelon (Charleston Gray)	cpewcgB344
Cp4.1LG01g23010	CSPI05G28590	Wild cucumber (PI 183967)	cpecpiB414
Cp4.1LG01g23010	Lsi02G015190	Bottle gourd (USVL1VR-Ls)	cpelsiB336
Cp4.1LG01g23010	MELO3C021488.2	Melon (DHL92) v3.6.1	cpemedB418
Cp4.1LG01g23010	CsaV3_5G037670	Cucumber (Chinese Long) v3	cpecucB0517
Cp4.1LG01g23010	Bhi06G000386	Wax gourd	cpewgoB0502
Cp4.1LG01g23010	CsGy5G027910	Cucumber (Gy14) v2	cgybcpeB625
Cp4.1LG01g23010	Carg04411	Silver-seed gourd	carcpeB0965
Cp4.1LG01g23010	Carg02273	Silver-seed gourd	carcpeB0374

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g23010	Cp4.1LG13g08600	Cucurbita pepo (Zucchini)	cpecpeB199

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g23010	Wax gourd	cpewgoB0573
Cp4.1LG01g23010	Cucurbita pepo (Zucchini)	cpecpeB347
Cp4.1LG01g23010	Cucurbita moschata (Rifu)	cmocpeB279
Cp4.1LG01g23010	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g23010	Cucumber (Gy14) v2	cgybcpeB064
Cp4.1LG01g23010	Cucumber (Gy14) v2	cgybcpeB371
Cp4.1LG01g23010	Melon (DHL92) v3.6.1	cpemedB452
Cp4.1LG01g23010	Silver-seed gourd	carcpeB0509
Cp4.1LG01g23010	Cucumber (Chinese Long) v3	cpecucB0475