Carg02273 (gene) Silver-seed gourd

Overview
NameCarg02273
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionphytolongin Phyl2.1-like
LocationCucurbita_argyrosperma_scaffold_007 : 958291 .. 959137 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTCGAATCCAGATCTCGTGTTATATGCCTGCATTGCAAGTGGAACTGTAATCCTTGCTGAATTCACGAGAGAGTTGAATCTCGTTGACTTGGCTTTCAGATGCATCGAGAAAGCCCCTCCTCATCACTCCATCTTCTCCCATACCGTGAGAAAGAGAGTGTACATGTTTTTGATCGAAGGTCCCTTCGTTTATTTCGGAATCTTCCATGAAGACCTTTACAAATCGGAGATTTGTGGTTTCTTAAACCGATTAAGGTGTGTTTTCGAGGAGTTTCTCGAATCCGAATCGTTGAAGGGTTTCGAGAACTTCACTTCCTACTGCTTTCAATCGCAGTTCGATTCGACTTTCCGGCATCTCCTTGGGTTGAATCTCAACAACACGTCGTACAGCGTATTGAAGGAGGCTCAGAGGTCAAGCTTGGATTCAAGTAAAAGAAAGCAGATACCGCTGATTTCGAAGTTCTCGAATCCCAGCAGCCTAATGAAGAAGAAGAAGAAGAAGAAGGTAGTTGGGGATGCTAATGAAGAAGCAGGGAAGTATGCAGTGGTTGATTCTGCGGATCTGAATGACCATAATAATGGTTTGTGTAGTAGAGATAGTTCATTGCTGAAGCAGAAGAATGGTTCCCATATGATTGAGCGTCAGAAAGTTAAGCAAATATGGCGGAAACATGTATGGGTTGTTTTGTCCATCGATTTGTTCGTATGTCTGGTTTTGTTTGCCATATGGCTTTGGGTTTGCAGAGGATTTCGGTGCATTGAAAGCTGAAATTGATGGGATTTCAATCCTTCATTGGCAGAAATGGCCATCTGGAAAACAGGGTTGTAAACACCATGTATGA

mRNA sequence

ATGGTTTCGAATCCAGATCTCGTGTTATATGCCTGCATTGCAAGTGGAACTGTAATCCTTGCTGAATTCACGAGAGAGTTGAATCTCGTTGACTTGGCTTTCAGATGCATCGAGAAAGCCCCTCCTCATCACTCCATCTTCTCCCATACCGTGAGAAAGAGAGTGTACATGTTTTTGATCGAAGGTCCCTTCGTTTATTTCGGAATCTTCCATGAAGACCTTTACAAATCGGAGATTTGTGGTTTCTTAAACCGATTAAGGTGTGTTTTCGAGGAGTTTCTCGAATCCGAATCGTTGAAGGGTTTCGAGAACTTCACTTCCTACTGCTTTCAATCGCAGTTCGATTCGACTTTCCGGCATCTCCTTGGGTTGAATCTCAACAACACGTCGTACAGCGTATTGAAGGAGGCTCAGAGGTCAAGCTTGGATTCAAGTAAAAGAAAGCAGATACCGCTGATTTCGAAGTTCTCGAATCCCAGCAGCCTAATGAAGAAGAAGAAGAAGAAGAAGGTAGTTGGGGATGCTAATGAAGAAGCAGGGAAGTATGCAGTGGTTGATTCTGCGGATCTGAATGACCATAATAATGGTTTGTGTAGTAGAGATAGTTCATTGCTGAAGCAGAAGAATGAGGATTTCGGTGCATTGAAAGCTGAAATTGATGGGATTTCAATCCTTCATTGGCAGAAATGGCCATCTGGAAAACAGGGTTGTAAACACCATGTATGA

Coding sequence (CDS)

ATGGTTTCGAATCCAGATCTCGTGTTATATGCCTGCATTGCAAGTGGAACTGTAATCCTTGCTGAATTCACGAGAGAGTTGAATCTCGTTGACTTGGCTTTCAGATGCATCGAGAAAGCCCCTCCTCATCACTCCATCTTCTCCCATACCGTGAGAAAGAGAGTGTACATGTTTTTGATCGAAGGTCCCTTCGTTTATTTCGGAATCTTCCATGAAGACCTTTACAAATCGGAGATTTGTGGTTTCTTAAACCGATTAAGGTGTGTTTTCGAGGAGTTTCTCGAATCCGAATCGTTGAAGGGTTTCGAGAACTTCACTTCCTACTGCTTTCAATCGCAGTTCGATTCGACTTTCCGGCATCTCCTTGGGTTGAATCTCAACAACACGTCGTACAGCGTATTGAAGGAGGCTCAGAGGTCAAGCTTGGATTCAAGTAAAAGAAAGCAGATACCGCTGATTTCGAAGTTCTCGAATCCCAGCAGCCTAATGAAGAAGAAGAAGAAGAAGAAGGTAGTTGGGGATGCTAATGAAGAAGCAGGGAAGTATGCAGTGGTTGATTCTGCGGATCTGAATGACCATAATAATGGTTTGTGTAGTAGAGATAGTTCATTGCTGAAGCAGAAGAATGAGGATTTCGGTGCATTGAAAGCTGAAATTGATGGGATTTCAATCCTTCATTGGCAGAAATGGCCATCTGGAAAACAGGGTTGTAAACACCATGTATGA

Protein sequence

MVSNPDLVLYACIASGTVILAEFTRELNLVDLAFRCIEKAPPHHSIFSHTVRKRVYMFLIEGPFVYFGIFHEDLYKSEICGFLNRLRCVFEEFLESESLKGFENFTSYCFQSQFDSTFRHLLGLNLNNTSYSVLKEAQRSSLDSSKRKQIPLISKFSNPSSLMKKKKKKKVVGDANEEAGKYAVVDSADLNDHNNGLCSRDSSLLKQKNEDFGALKAEIDGISILHWQKWPSGKQGCKHHV
Homology
[Close]
BLAST of Carg02273 vs. NCBI nr
Match: XP_023549951.1 (phytolongin Phyl2.2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 379.8 bits (974), Expect = 6.9e-102
Identity = 204/209 (97.61%), Postives = 206/209 (98.56%), Query Frame = 0 

Query: 1   MVSNPDLVLYACIASGTVILAEFTRELNLVDLAFRCIEKAPPHHSIFSHTVRKRVYMFLI 60
           MVSNPDLVLYACIASGTVILAEFTRELNL DLAFRCIEKAPPHHSIFSHTVRKRVYMFLI
Sbjct: 1   MVSNPDLVLYACIASGTVILAEFTRELNLDDLAFRCIEKAPPHHSIFSHTVRKRVYMFLI 60

Query: 61  EGPFVYFGIFHEDLYKSEICGFLNRLRCVFEEFLESESLKGFENFTSYCFQSQFDSTFRH 120
           EGPFVYFGIFHEDLYKSEICGFLNRLRCVFEEFLE+ES KGFENFTSYCFQSQFDSTFRH
Sbjct: 61  EGPFVYFGIFHEDLYKSEICGFLNRLRCVFEEFLETESFKGFENFTSYCFQSQFDSTFRH 120

Query: 121 LLGLNLNNTSYSVLKEAQRSSLDSSKRKQIPLISKFSNPSXXXXXXXXXXXXGDANEEAG 180
           LLGLNLNNTS SVLKEAQRSSLDSSKRKQIPLISKFSNPSXXXXXXXXXXXXGDANEEAG
Sbjct: 121 LLGLNLNNTSCSVLKEAQRSSLDSSKRKQIPLISKFSNPSXXXXXXXXXXXXGDANEEAG 180

Query: 181 KYAVVDSADLNDHNNGLCSRDSSLLKQKN 210
           KYA+VDSADLNDHNNGLCSRDSSLLKQKN
Sbjct: 181 KYAMVDSADLNDHNNGLCSRDSSLLKQKN 209

[Close]
BLAST of Carg02273 vs. NCBI nr
Match: XP_022938537.1 (phytolongin Phyl2.2-like [Cucurbita moschata])

HSP 1 Score: 377.9 bits (969), Expect = 2.6e-101
Identity = 199/209 (95.22%), Postives = 200/209 (95.69%), Query Frame = 0 

Query: 1   MVSNPDLVLYACIASGTVILAEFTRELNLVDLAFRCIEKAPPHHSIFSHTVRKRVYMFLI 60
           MVSNPDLVLYACIASGTVILAEFTRELNL DLAFRCIEKAPPHHSIFSHTVRKRVYMFLI
Sbjct: 1   MVSNPDLVLYACIASGTVILAEFTRELNLDDLAFRCIEKAPPHHSIFSHTVRKRVYMFLI 60

Query: 61  EGPFVYFGIFHEDLYKSEICGFLNRLRCVFEEFLESESLKGFENFTSYCFQSQFDSTFRH 120
           EGPFVYFGIFHEDLYKSEICGFLNRL CVFEEFLESES KGFENFTSYCFQSQFDSTFRH
Sbjct: 61  EGPFVYFGIFHEDLYKSEICGFLNRLSCVFEEFLESESFKGFENFTSYCFQSQFDSTFRH 120

Query: 121 LLGLNLNNTSYSVLKEAQRSSLDSSKRKQIPLISKFSNPSXXXXXXXXXXXXGDANEEAG 180
           LLGLNLNNTSYSVLKEAQRSSLDSSKRKQIPLISKFSNPS    XXXXXX  GDANEEAG
Sbjct: 121 LLGLNLNNTSYSVLKEAQRSSLDSSKRKQIPLISKFSNPS-SLMXXXXXXVVGDANEEAG 180

Query: 181 KYAVVDSADLNDHNNGLCSRDSSLLKQKN 210
           KYA+VDSADLNDHNNGLCSRDSSLLKQKN
Sbjct: 181 KYAMVDSADLNDHNNGLCSRDSSLLKQKN 208

[Close]
BLAST of Carg02273 vs. NCBI nr
Match: XP_022993661.1 (phytolongin Phyl2.2-like [Cucurbita maxima])

HSP 1 Score: 377.9 bits (969), Expect = 2.6e-101
Identity = 203/209 (97.13%), Postives = 205/209 (98.09%), Query Frame = 0 

Query: 1   MVSNPDLVLYACIASGTVILAEFTRELNLVDLAFRCIEKAPPHHSIFSHTVRKRVYMFLI 60
           MVSNPDLVLYACIAS TVILAEFTRELNL DLAFRCIEKAPPHHSIFSHTVRKRVYMFLI
Sbjct: 1   MVSNPDLVLYACIASRTVILAEFTRELNLDDLAFRCIEKAPPHHSIFSHTVRKRVYMFLI 60

Query: 61  EGPFVYFGIFHEDLYKSEICGFLNRLRCVFEEFLESESLKGFENFTSYCFQSQFDSTFRH 120
           EGPFVYFGIFHEDLYKSEICGFLNRLRCVFEEFLE+ES KGFENFTSYCFQSQFDSTFRH
Sbjct: 61  EGPFVYFGIFHEDLYKSEICGFLNRLRCVFEEFLETESFKGFENFTSYCFQSQFDSTFRH 120

Query: 121 LLGLNLNNTSYSVLKEAQRSSLDSSKRKQIPLISKFSNPSXXXXXXXXXXXXGDANEEAG 180
           LLGLNLNNTSYSV KEAQRSSLDSSKRKQIPLISKFSNPSXXXXXXXXXXXXGDANEEAG
Sbjct: 121 LLGLNLNNTSYSVSKEAQRSSLDSSKRKQIPLISKFSNPSXXXXXXXXXXXXGDANEEAG 180

Query: 181 KYAVVDSADLNDHNNGLCSRDSSLLKQKN 210
           KYA+VDSADLNDHNNGLCSRDSSLLKQKN
Sbjct: 181 KYAMVDSADLNDHNNGLCSRDSSLLKQKN 209

[Close]
BLAST of Carg02273 vs. NCBI nr
Match: KGN52421.1 (hypothetical protein Csa_5G633190 [Cucumis sativus])

HSP 1 Score: 302.4 bits (773), Expect = 1.4e-78
Identity = 160/222 (72.07%), Postives = 173/222 (77.93%), Query Frame = 0 

Query: 1   MVSNPDLVLYACIASGTVILAEFTRELNLVDLAFRCIEKAPPHHSIFSHTVRKRVYMFLI 60
           MVSNPDLVLY+CIA GT+ILAEFTRE NL DL FRCIEK PPHHSIFSHT+R R Y FLI
Sbjct: 1   MVSNPDLVLYSCIARGTIILAEFTREPNLDDLPFRCIEKTPPHHSIFSHTIRNRAYTFLI 60

Query: 61  EGPFVYFGIFHEDLYKSEICGFLNRLRCVFEEFLESESLKGFENFTSYCFQSQFDSTFRH 120
           EG FVYFGIFHEDL KSE+ GFLNRL+  FE FLESESLKGFENFTS+CFQS FDS+FRH
Sbjct: 61  EGSFVYFGIFHEDLNKSEVSGFLNRLKRDFEVFLESESLKGFENFTSHCFQSHFDSSFRH 120

Query: 121 LLGLNLNNTSYSVLKEAQRSSLDSSKRKQIPLISKFSNPSXXXXXXXXXXXXGDANEEAG 180
           LLGLNLN TS + LK +QRSSLDSS RKQIPL+SKFSNP             GD N + G
Sbjct: 121 LLGLNLNKTSSNGLKGSQRSSLDSSLRKQIPLVSKFSNPG--SLMKKKKKVTGDGNWDGG 180

Query: 181 KYAVVDSADLNDHNNGLCSRDSSLLKQK----NEDFGALKAE 219
           KY + DS DL D NNGLCSRD +LL QK    N DF ALKAE
Sbjct: 181 KYGMDDSVDLYDDNNGLCSRDITLLMQKHGSHNRDFSALKAE 220

[Close]
BLAST of Carg02273 vs. NCBI nr
Match: XP_008458710.1 (PREDICTED: phytolongin Phyl2.1-like [Cucumis melo])

HSP 1 Score: 295.8 bits (756), Expect = 1.3e-76
Identity = 154/209 (73.68%), Postives = 165/209 (78.95%), Query Frame = 0 

Query: 1   MVSNPDLVLYACIASGTVILAEFTRELNLVDLAFRCIEKAPPHHSIFSHTVRKRVYMFLI 60
           MVSNPDLV Y+CIA GT+ILAEFTRE NL DL  RCIEKAPPHHSIFSHT+R R Y FLI
Sbjct: 1   MVSNPDLVFYSCIARGTIILAEFTREPNLDDLPLRCIEKAPPHHSIFSHTIRNRAYTFLI 60

Query: 61  EGPFVYFGIFHEDLYKSEICGFLNRLRCVFEEFLESESLKGFENFTSYCFQSQFDSTFRH 120
           EG FVYFGIFHEDL KSE+ GFLNRL+  FE FLESESLKGFENFTSYCFQSQFDS+FRH
Sbjct: 61  EGSFVYFGIFHEDLNKSEVSGFLNRLKRDFEVFLESESLKGFENFTSYCFQSQFDSSFRH 120

Query: 121 LLGLNLNNTSYSVLKEAQRSSLDSSKRKQIPLISKFSNPSXXXXXXXXXXXXGDANEEAG 180
           LLGLNLN TS + L  +QRSSLDSS RKQIPL+SKFSNP             GD N E G
Sbjct: 121 LLGLNLNKTSSNGLMGSQRSSLDSSTRKQIPLVSKFSNPG--SLMKKKKKVTGDGNWEGG 180

Query: 181 KYAVVDSADLNDHNNGLCSRDSSLLKQKN 210
           KY + DS DL D NNGLCSRD +LL QKN
Sbjct: 181 KYGMDDSVDLYDDNNGLCSRDITLLMQKN 207

[Close]
BLAST of Carg02273 vs. TAIR10
Match: AT5G52990.1 (SNARE-like superfamily protein)

HSP 1 Score: 115.9 bits (289), Expect = 3.4e-26
Identity = 68/172 (39.53%), Postives = 97/172 (56.40%), Query Frame = 0 

Query: 1   MVSNPDLVLYACIASGTVILAEFT--RELNLVDLAFRCIEKAPPHHSIFSHTVRKRVYMF 60
           M+SNP L+ Y CIA GTV+LAEF   +E  +  +A RCIE  PPHHS+FSHTV K+ Y F
Sbjct: 1   MISNPSLLSYTCIAKGTVVLAEFVSRQEPGIEAIALRCIENTPPHHSMFSHTVHKKTYTF 60

Query: 61  LI-EGPFVYFGIFHEDLYKSEICGFLNRLRCVFEEFLE--SESLKGFENFTSYCFQSQFD 120
            I +  FVYF I  E + K E    LNRLR   E+ ++     ++   N  S+C Q + D
Sbjct: 61  AIDDDSFVYFSISDESMEKPESFWVLNRLRSAIEDLIKDGGSDVETLINPVSHCLQLKLD 120

Query: 121 STFRHLLG--------LNLNNTSYSVLKEAQRSSLDSSKRKQIPLISKFSNP 160
             F  ++G        ++L  +  SV +E++  S+DSSK ++  L+     P
Sbjct: 121 PVFAEIVGVVDLELLDMDLVGSPRSVARESRNPSIDSSKGRRAALMPLLGKP 172

[Close]
BLAST of Carg02273 vs. TAIR10
Match: AT4G27840.1 (SNARE-like superfamily protein)

HSP 1 Score: 112.8 bits (281), Expect = 2.9e-25
Identity = 70/173 (40.46%), Postives = 94/173 (54.34%), Query Frame = 0 

Query: 1   MVSNPDLVLYACIASGTVILAEFT--RELNLVDLAFRCIEKAPPHHSIFSHTVRKRVYMF 60
           M SN  ++ Y+CIA GTVILAEF    E  + DLA RCIE  PPHHS+ SHTV KR Y  
Sbjct: 1   MTSNQRMLFYSCIAKGTVILAEFASKEEPGIEDLALRCIENVPPHHSMISHTVHKRTYAL 60

Query: 61  LIEGPFVYFGIFHEDLYKSEICGFLNRLRCVFEEFLESES-LKGFENFTSYCFQSQFDST 120
           +I+G F YF I  E + KSE     NRL+   E  +E  S     +N T +C QS+ D  
Sbjct: 61  IIDGLFSYFAILDEVVAKSESVWLFNRLKSATESLMEDGSTADSLDNPTQHCLQSKLDPV 120

Query: 121 FRHLLGLNLNN---------TSYSVLKE--AQRSSLDSSKRKQ----IPLISK 156
           F  +  +  N+         +  S+ +E  +   SLDSSK ++    +PL+ K
Sbjct: 121 FAEIAAIGGNHNKDLELEFGSPRSIAREIKSNNQSLDSSKGRKGGALMPLLGK 173

[Close]
BLAST of Carg02273 vs. TAIR10
Match: AT4G10170.1 (SNARE-like superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-08
Identity = 34/96 (35.42%), Postives = 48/96 (50.00%), Query Frame = 0 

Query: 8   VLYACIASGTVILAEFT-RELNLVDLAFRCIEKAPPHHSIFSHTVRKRVYMFLIEGPFVY 67
           V Y C++    IL  +   +     LA  C+EK+PP H+ +  T+ KR + FLI   FVY
Sbjct: 8   VHYCCVSRDNQILYSYNGGDQTNESLAALCLEKSPPFHTWYFETIGKRRFGFLIGDGFVY 67

Query: 68  FGIFHEDLYKSEICGFLNRLRCVFEEFLESESLKGF 103
           F I  E L +S +  FL  LR  F++     S   F
Sbjct: 68  FAIVDEVLKRSSVLKFLEHLRDEFKKAARENSRGSF 103

[Close]
BLAST of Carg02273 vs. TAIR10
Match: AT1G33475.1 (SNARE-like superfamily protein)

HSP 1 Score: 55.1 bits (131), Expect = 7.1e-08
Identity = 38/125 (30.40%), Postives = 56/125 (44.80%), Query Frame = 0 

Query: 1   MVSNPDLVLYACIASGTVILAEFTR---ELNLVDLAFRCIEKAPPHHSIFSHTVRKRVYM 60
           M S  + V Y C++    I+  +       N   LA  C+EK PP H  +  T  K+ + 
Sbjct: 1   MGSIQNTVHYCCVSRDNQIMYAYNNAGDHRNNESLAALCLEKTPPFHKWYFETRGKKTFG 60

Query: 61  FLIEGPFVYFGIFHEDLYKSEICGFLNRLRCVFEEFLESESLKGFENFTSYCFQSQFDST 120
           FL++  FVYF I  +   KS +  FL +LR   +E  +  S   F    S  F +  D  
Sbjct: 61  FLMKDDFVYFAIVDDVFKKSSVLDFLEKLRDELKEANKKNSRGSFSG--SISFSNVQDQI 120

Query: 121 FRHLL 123
            R L+
Sbjct: 121 VRRLI 123

[Close]
BLAST of Carg02273 vs. TAIR10
Match: AT4G15780.1 (vesicle-associated membrane protein 724)

HSP 1 Score: 46.2 bits (108), Expect = 3.3e-05
Identity = 26/86 (30.23%), Postives = 47/86 (54.65%), Query Frame = 0 

Query: 9  LYACIASGTVILAEFTREL-NLVDLAFRCIEKAP-PHHSIFSHTVRKRVYMFLIEGPFVY 68
          +Y+ +A GT+ILAE+T    N   +A +C++K P   +S F++      + FL+E  + Y
Sbjct: 7  IYSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLVEDGYAY 66

Query: 69 FGIFHEDLYKSEICGFLNRLRCVFEE 93
            +  + L K     FL R++  F++
Sbjct: 67 CVVAKDSLSKQISIAFLERVKADFKK 92

[Close]
BLAST of Carg02273 vs. Swiss-Prot
Match: sp|Q9LVV3|PHL22_ARATH (Phytolongin Phyl2.2 OS=Arabidopsis thaliana OX=3702 GN=PHYL2.2 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.1e-25
Identity = 68/172 (39.53%), Postives = 97/172 (56.40%), Query Frame = 0 

Query: 1   MVSNPDLVLYACIASGTVILAEFT--RELNLVDLAFRCIEKAPPHHSIFSHTVRKRVYMF 60
           M+SNP L+ Y CIA GTV+LAEF   +E  +  +A RCIE  PPHHS+FSHTV K+ Y F
Sbjct: 1   MISNPSLLSYTCIAKGTVVLAEFVSRQEPGIEAIALRCIENTPPHHSMFSHTVHKKTYTF 60

Query: 61  LI-EGPFVYFGIFHEDLYKSEICGFLNRLRCVFEEFLE--SESLKGFENFTSYCFQSQFD 120
            I +  FVYF I  E + K E    LNRLR   E+ ++     ++   N  S+C Q + D
Sbjct: 61  AIDDDSFVYFSISDESMEKPESFWVLNRLRSAIEDLIKDGGSDVETLINPVSHCLQLKLD 120

Query: 121 STFRHLLG--------LNLNNTSYSVLKEAQRSSLDSSKRKQIPLISKFSNP 160
             F  ++G        ++L  +  SV +E++  S+DSSK ++  L+     P
Sbjct: 121 PVFAEIVGVVDLELLDMDLVGSPRSVARESRNPSIDSSKGRRAALMPLLGKP 172

[Close]
BLAST of Carg02273 vs. Swiss-Prot
Match: sp|Q9STP2|PHL21_ARATH (Phytolongin Phyl2.1 OS=Arabidopsis thaliana OX=3702 GN=PHYL2.1 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.2e-24
Identity = 70/173 (40.46%), Postives = 94/173 (54.34%), Query Frame = 0 

Query: 1   MVSNPDLVLYACIASGTVILAEFT--RELNLVDLAFRCIEKAPPHHSIFSHTVRKRVYMF 60
           M SN  ++ Y+CIA GTVILAEF    E  + DLA RCIE  PPHHS+ SHTV KR Y  
Sbjct: 1   MTSNQRMLFYSCIAKGTVILAEFASKEEPGIEDLALRCIENVPPHHSMISHTVHKRTYAL 60

Query: 61  LIEGPFVYFGIFHEDLYKSEICGFLNRLRCVFEEFLESES-LKGFENFTSYCFQSQFDST 120
           +I+G F YF I  E + KSE     NRL+   E  +E  S     +N T +C QS+ D  
Sbjct: 61  IIDGLFSYFAILDEVVAKSESVWLFNRLKSATESLMEDGSTADSLDNPTQHCLQSKLDPV 120

Query: 121 FRHLLGLNLNN---------TSYSVLKE--AQRSSLDSSKRKQ----IPLISK 156
           F  +  +  N+         +  S+ +E  +   SLDSSK ++    +PL+ K
Sbjct: 121 FAEIAAIGGNHNKDLELEFGSPRSIAREIKSNNQSLDSSKGRKGGALMPLLGK 173

[Close]
BLAST of Carg02273 vs. Swiss-Prot
Match: sp|Q9SN26|PHL11_ARATH (Phytolongin Phyl1.1 OS=Arabidopsis thaliana OX=3702 GN=PHYL1.1 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.4e-07
Identity = 34/96 (35.42%), Postives = 48/96 (50.00%), Query Frame = 0 

Query: 8   VLYACIASGTVILAEFT-RELNLVDLAFRCIEKAPPHHSIFSHTVRKRVYMFLIEGPFVY 67
           V Y C++    IL  +   +     LA  C+EK+PP H+ +  T+ KR + FLI   FVY
Sbjct: 8   VHYCCVSRDNQILYSYNGGDQTNESLAALCLEKSPPFHTWYFETIGKRRFGFLIGDGFVY 67

Query: 68  FGIFHEDLYKSEICGFLNRLRCVFEEFLESESLKGF 103
           F I  E L +S +  FL  LR  F++     S   F
Sbjct: 68  FAIVDEVLKRSSVLKFLEHLRDEFKKAARENSRGSF 103

[Close]
BLAST of Carg02273 vs. Swiss-Prot
Match: sp|Q84WF5|PHL12_ARATH (Phytolongin Phyl1.2 OS=Arabidopsis thaliana OX=3702 GN=PHYL1.2 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.3e-06
Identity = 38/125 (30.40%), Postives = 56/125 (44.80%), Query Frame = 0 

Query: 1   MVSNPDLVLYACIASGTVILAEFTR---ELNLVDLAFRCIEKAPPHHSIFSHTVRKRVYM 60
           M S  + V Y C++    I+  +       N   LA  C+EK PP H  +  T  K+ + 
Sbjct: 1   MGSIQNTVHYCCVSRDNQIMYAYNNAGDHRNNESLAALCLEKTPPFHKWYFETRGKKTFG 60

Query: 61  FLIEGPFVYFGIFHEDLYKSEICGFLNRLRCVFEEFLESESLKGFENFTSYCFQSQFDST 120
           FL++  FVYF I  +   KS +  FL +LR   +E  +  S   F    S  F +  D  
Sbjct: 61  FLMKDDFVYFAIVDDVFKKSSVLDFLEKLRDELKEANKKNSRGSFSG--SISFSNVQDQI 120

Query: 121 FRHLL 123
            R L+
Sbjct: 121 VRRLI 123

[Close]
BLAST of Carg02273 vs. Swiss-Prot
Match: sp|O23429|VA724_ARATH (Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana OX=3702 GN=VAMP724 PE=2 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 5.9e-04
Identity = 26/86 (30.23%), Postives = 47/86 (54.65%), Query Frame = 0 

Query: 9  LYACIASGTVILAEFTREL-NLVDLAFRCIEKAP-PHHSIFSHTVRKRVYMFLIEGPFVY 68
          +Y+ +A GT+ILAE+T    N   +A +C++K P   +S F++      + FL+E  + Y
Sbjct: 7  IYSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLVEDGYAY 66

Query: 69 FGIFHEDLYKSEICGFLNRLRCVFEE 93
            +  + L K     FL R++  F++
Sbjct: 67 CVVAKDSLSKQISIAFLERVKADFKK 92

[Close]
BLAST of Carg02273 vs. TrEMBL
Match: tr|A0A0A0KX86|A0A0A0KX86_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633190 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 9.3e-79
Identity = 160/222 (72.07%), Postives = 173/222 (77.93%), Query Frame = 0 

Query: 1   MVSNPDLVLYACIASGTVILAEFTRELNLVDLAFRCIEKAPPHHSIFSHTVRKRVYMFLI 60
           MVSNPDLVLY+CIA GT+ILAEFTRE NL DL FRCIEK PPHHSIFSHT+R R Y FLI
Sbjct: 1   MVSNPDLVLYSCIARGTIILAEFTREPNLDDLPFRCIEKTPPHHSIFSHTIRNRAYTFLI 60

Query: 61  EGPFVYFGIFHEDLYKSEICGFLNRLRCVFEEFLESESLKGFENFTSYCFQSQFDSTFRH 120
           EG FVYFGIFHEDL KSE+ GFLNRL+  FE FLESESLKGFENFTS+CFQS FDS+FRH
Sbjct: 61  EGSFVYFGIFHEDLNKSEVSGFLNRLKRDFEVFLESESLKGFENFTSHCFQSHFDSSFRH 120

Query: 121 LLGLNLNNTSYSVLKEAQRSSLDSSKRKQIPLISKFSNPSXXXXXXXXXXXXGDANEEAG 180
           LLGLNLN TS + LK +QRSSLDSS RKQIPL+SKFSNP             GD N + G
Sbjct: 121 LLGLNLNKTSSNGLKGSQRSSLDSSLRKQIPLVSKFSNPG--SLMKKKKKVTGDGNWDGG 180

Query: 181 KYAVVDSADLNDHNNGLCSRDSSLLKQK----NEDFGALKAE 219
           KY + DS DL D NNGLCSRD +LL QK    N DF ALKAE
Sbjct: 181 KYGMDDSVDLYDDNNGLCSRDITLLMQKHGSHNRDFSALKAE 220

[Close]
BLAST of Carg02273 vs. TrEMBL
Match: tr|A0A1S3C809|A0A1S3C809_CUCME (phytolongin Phyl2.1-like OS=Cucumis melo OX=3656 GN=LOC103498036 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 8.7e-77
Identity = 154/209 (73.68%), Postives = 165/209 (78.95%), Query Frame = 0 

Query: 1   MVSNPDLVLYACIASGTVILAEFTRELNLVDLAFRCIEKAPPHHSIFSHTVRKRVYMFLI 60
           MVSNPDLV Y+CIA GT+ILAEFTRE NL DL  RCIEKAPPHHSIFSHT+R R Y FLI
Sbjct: 1   MVSNPDLVFYSCIARGTIILAEFTREPNLDDLPLRCIEKAPPHHSIFSHTIRNRAYTFLI 60

Query: 61  EGPFVYFGIFHEDLYKSEICGFLNRLRCVFEEFLESESLKGFENFTSYCFQSQFDSTFRH 120
           EG FVYFGIFHEDL KSE+ GFLNRL+  FE FLESESLKGFENFTSYCFQSQFDS+FRH
Sbjct: 61  EGSFVYFGIFHEDLNKSEVSGFLNRLKRDFEVFLESESLKGFENFTSYCFQSQFDSSFRH 120

Query: 121 LLGLNLNNTSYSVLKEAQRSSLDSSKRKQIPLISKFSNPSXXXXXXXXXXXXGDANEEAG 180
           LLGLNLN TS + L  +QRSSLDSS RKQIPL+SKFSNP             GD N E G
Sbjct: 121 LLGLNLNKTSSNGLMGSQRSSLDSSTRKQIPLVSKFSNPG--SLMKKKKKVTGDGNWEGG 180

Query: 181 KYAVVDSADLNDHNNGLCSRDSSLLKQKN 210
           KY + DS DL D NNGLCSRD +LL QKN
Sbjct: 181 KYGMDDSVDLYDDNNGLCSRDITLLMQKN 207

[Close]
BLAST of Carg02273 vs. TrEMBL
Match: tr|A0A2N9IVU8|A0A2N9IVU8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56141 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.2e-38
Identity = 92/213 (43.19%), Postives = 133/213 (62.44%), Query Frame = 0 

Query: 1   MVSNPDLVLYACIASGTVILAEFTRELNLVDLAFRCIEKAPPHHSIFSHTVRKRVYMFLI 60
           M+SNPDL+LY CIA GT IL+ +T+EL L  L  +C+EK PP+HS+FSHT+R+R Y FLI
Sbjct: 1   MISNPDLILYVCIAKGTTILSHYTKELGLESLVLQCLEKTPPYHSMFSHTIRRRTYTFLI 60

Query: 61  EGPFVYFGIFHEDLYKSEICGFLNRLRCVFEEFLESESLKGFENFTSYCFQSQFDSTFRH 120
           + PFVYF IF+ED+ +S+   FLNR++C FEE +E+ +LK F+ F+S+C Q   D  FR 
Sbjct: 61  QDPFVYFAIFNEDMEQSQGVWFLNRVKCAFEEVMEAGALKDFDKFSSHCLQKVCDPIFRE 120

Query: 121 LLGLNL--NNTSYSVLKEAQRSSLDSS---KRKQIPLISKFSNPSXXXXXXXXXXXXGDA 180
            + L+L   N+S+S  K++   SLD+    K    PL+   S P+            G+ 
Sbjct: 121 AMALDLRMGNSSWSDSKDSWNLSLDAGIGMKVAMAPLLG--SKPNKGLKKKKKRASDGEV 180

Query: 181 NEEAGKYAVVDSADLNDHNNGLCSRDSSLLKQK 209
           N ++   ++    D+ D  NG+C +D SL  QK
Sbjct: 181 NGDSKDRSLEKKVDVFDDVNGVC-KDFSLPVQK 210

[Close]
BLAST of Carg02273 vs. TrEMBL
Match: tr|A0A061G2G4|A0A061G2G4_THECC (SNARE-like superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_015425 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 7.4e-36
Identity = 85/161 (52.80%), Postives = 108/161 (67.08%), Query Frame = 0 

Query: 1   MVSNPDLVLYACIASGTVILAEF-TRELNLVDLAFRCIEKAPPHHSIFSHTVRKRVYMFL 60
           M+SNP+L+ YACIA G  ILAEF ++E  +  LA +CIEK PP HS+FSHTV KR Y FL
Sbjct: 1   MISNPNLIFYACIAKGPTILAEFSSKEEGIKSLAQKCIEKTPPFHSMFSHTVSKRTYTFL 60

Query: 61  IEGPFVYFGIFHEDLYKSEICGFLNRLRCVFEEFLESESLKGFENFTSYCFQSQFDSTFR 120
           I+GPF YF IFHEDL KSE   FLNRL+C FE+FLE+  + G +N T  C QS FD  F 
Sbjct: 61  IDGPFAYFIIFHEDLEKSESFWFLNRLKCAFEDFLETGLIVGTDNMTPTCLQSYFDPIFS 120

Query: 121 HLLGLNLNNTSYSVLKEAQRSSLDSSKRKQIPLISKFSNPS 161
            ++ L++   + S  KE+Q  SLDS+K K   +     +PS
Sbjct: 121 EIMALDMELVT-SPSKESQDPSLDSNKGKGTAVAPLLGSPS 160

[Close]
BLAST of Carg02273 vs. TrEMBL
Match: tr|A0A2P5DFJ7|A0A2P5DFJ7_PARAD (Longin domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_068930 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.8e-35
Identity = 101/213 (47.42%), Postives = 139/213 (65.26%), Query Frame = 0 

Query: 1   MVSNPDLVLYACIASGTVILAEFTRELNLVDLAFRCIEKAPPHHSIFSHTVRKRVYMFLI 60
           MVSNPDL+ YACIA  T ILAEFT+E  L DLA +CI++ PP+HS+FSHTVRKR Y FLI
Sbjct: 1   MVSNPDLIYYACIARDTTILAEFTKEPQLEDLARQCIQRTPPYHSMFSHTVRKRTYTFLI 60

Query: 61  EGPFVYFGIFHEDLYKSEICGFLNRLRCVFEEFLESESLKGFENFTSYCFQSQFDSTFRH 120
           + PFVYF IF E+L +SE   FLNR++  FEE     S +G EN  S+CFQ++FDS  + 
Sbjct: 61  DDPFVYFAIFDEELDQSEGLWFLNRVKAGFEE--GGGSKRGSENLNSHCFQAEFDSILKE 120

Query: 121 LLGLNLN--NTSYSVLKEAQRSSLDSSKRKQIPLISKFSNPSXXXXXXXXXXXXGDANEE 180
            +GL++   +++ S+   +Q  SLDSS+  Q    +        XXXXXXXX  G++N +
Sbjct: 121 SVGLDMGLVDSTSSLSSVSQNLSLDSSRGGQSFGFTPLLGVKPVXXXXXXXXLSGESNGD 180

Query: 181 AGKYAVV--DSADLNDHNNGLCSRDSSLLKQKN 210
           +GK +    +S D  D  NG+ +R+ +   QK+
Sbjct: 181 SGKDSTTAENSVDAYDDVNGVSNREFTSTMQKS 211

The following BLAST results are available for this feature:
BLAST of Carg02273 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023549951.16.9e-10297.61phytolongin Phyl2.2-like [Cucurbita pepo subsp. pepo][more]
XP_022938537.12.6e-10195.22phytolongin Phyl2.2-like [Cucurbita moschata][more]
XP_022993661.12.6e-10197.13phytolongin Phyl2.2-like [Cucurbita maxima][more]
KGN52421.11.4e-7872.07hypothetical protein Csa_5G633190 [Cucumis sativus][more]
XP_008458710.11.3e-7673.68PREDICTED: phytolongin Phyl2.1-like [Cucumis melo][more]
BLAST of Carg02273 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G52990.13.4e-2639.53SNARE-like superfamily protein[more]
AT4G27840.12.9e-2540.46SNARE-like superfamily protein[more]
AT4G10170.12.4e-0835.42SNARE-like superfamily protein[more]
AT1G33475.17.1e-0830.40SNARE-like superfamily protein[more]
AT4G15780.13.3e-0530.23vesicle-associated membrane protein 724[more]
BLAST of Carg02273 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LVV3|PHL22_ARATH6.1e-2539.53Phytolongin Phyl2.2 OS=Arabidopsis thaliana OX=3702 GN=PHYL2.2 PE=2 SV=1[more]
sp|Q9STP2|PHL21_ARATH5.2e-2440.46Phytolongin Phyl2.1 OS=Arabidopsis thaliana OX=3702 GN=PHYL2.1 PE=2 SV=1[more]
sp|Q9SN26|PHL11_ARATH4.4e-0735.42Phytolongin Phyl1.1 OS=Arabidopsis thaliana OX=3702 GN=PHYL1.1 PE=2 SV=1[more]
sp|Q84WF5|PHL12_ARATH1.3e-0630.40Phytolongin Phyl1.2 OS=Arabidopsis thaliana OX=3702 GN=PHYL1.2 PE=2 SV=1[more]
sp|O23429|VA724_ARATH5.9e-0430.23Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana OX=3702 GN=VAMP7... [more]
BLAST of Carg02273 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KX86|A0A0A0KX86_CUCSA9.3e-7972.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633190 PE=4 SV=1[more]
tr|A0A1S3C809|A0A1S3C809_CUCME8.7e-7773.68phytolongin Phyl2.1-like OS=Cucumis melo OX=3656 GN=LOC103498036 PE=4 SV=1[more]
tr|A0A2N9IVU8|A0A2N9IVU8_FAGSY1.2e-3843.19Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56141 PE=4 SV=1[more]
tr|A0A061G2G4|A0A061G2G4_THECC7.4e-3652.80SNARE-like superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_01542... [more]
tr|A0A2P5DFJ7|A0A2P5DFJ7_PARAD2.8e-3547.42Longin domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011012Longin-like_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg02273-RACarg02273-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.30.450.50coord: 7..169
e-value: 7.6E-16
score: 60.2
NoneNo IPR availablePANTHERPTHR21136SNARE PROTEINScoord: 1..210
NoneNo IPR availablePANTHERPTHR21136:SF93PHYTOLONGIN PHYL2.1-RELATEDcoord: 1..210
IPR011012Longin-like domain superfamilySUPERFAMILYSSF64356SNARE-likecoord: 8..117

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg02273Cla010362Watermelon (97103) v1carwmB0246
Carg02273Csa5G633190Cucumber (Chinese Long) v2carcuB0293
Carg02273MELO3C021488Melon (DHL92) v3.5.1carmeB0260
Carg02273ClCG09G018560Watermelon (Charleston Gray)carwcgB0249
Carg02273CSPI05G28590Wild cucumber (PI 183967)carcpiB0297
Carg02273Cucsa.158680Cucumber (Gy14) v1carcgyB0309
Carg02273CmaCh15G003000Cucurbita maxima (Rimu)carcmaB0362
Carg02273CmaCh04G027380Cucurbita maxima (Rimu)carcmaB0374
Carg02273Lsi02G015190Bottle gourd (USVL1VR-Ls)carlsiB232
Carg02273Cp4.1LG13g08600Cucurbita pepo (Zucchini)carcpeB0366
Carg02273Cp4.1LG01g23010Cucurbita pepo (Zucchini)carcpeB0374
Carg02273CsGy5G027910Cucumber (Gy14) v2carcgybB0280
Carg02273MELO3C021488.2Melon (DHL92) v3.6.1carmedB0270
Carg02273CsaV3_5G037670Cucumber (Chinese Long) v3carcucB0296
Carg02273Cla97C09G179980Watermelon (97103) v2carwmbB0279
Carg02273Bhi06G000386Wax gourdcarwgoB0339
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg02273Carg04411Silver-seed gourdcarcarB306
The following block(s) are covering this gene:
GeneOrganismBlock
Carg02273Silver-seed gourdcarcarB299
Carg02273Silver-seed gourdcarcarB300
Carg02273Silver-seed gourdcarcarB312
Carg02273Cucumber (Gy14) v1carcgyB0304
Carg02273Cucurbita maxima (Rimu)carcmaB0364
Carg02273Cucurbita maxima (Rimu)carcmaB0359
Carg02273Cucurbita maxima (Rimu)carcmaB0360
Carg02273Cucurbita moschata (Rifu)carcmoB0360
Carg02273Cucurbita moschata (Rifu)carcmoB0362
Carg02273Cucurbita moschata (Rifu)carcmoB0370
Carg02273Cucurbita pepo (Zucchini)carcpeB0363
Carg02273Cucurbita pepo (Zucchini)carcpeB0378
Carg02273Wild cucumber (PI 183967)carcpiB0288
Carg02273Cucumber (Chinese Long) v2carcuB0285
Carg02273Bottle gourd (USVL1VR-Ls)carlsiB233
Carg02273Melon (DHL92) v3.5.1carmeB0266
Carg02273Melon (DHL92) v3.6.1carmedB0277
Carg02273Watermelon (97103) v2carwmbB0263
Carg02273Wax gourdcarwgoB0352