Cp4.1LG01g22610 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g22610
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCG8675-PA
LocationCp4.1LG01 : 20185040 .. 20187708 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATCCATCATCGGCTTCAATATTACAAACCCTTCCTTTTTATGTGTGTTCTCGTTCGTATTTTCATTTGGTGTCTGGCTTGTTCTTACTGAATTGGACTTCTCTATTTCTCAATCTGAAAAAAATAAAATTAGGGTTTAGTGCAAAGCCCGCGATACTCAGAATGAGCAGCAAGCACGGTGCTCCGAAGCACCAAAACAAATACGCTTGGAAACCCAACGCCGGCCGCAAAATCAACGAAACGGAGGTTGGAGGCAGATTCCGCCCACTATCCGAGATCACTGGAGTTTGTCTTCGCTGCAAGGACCAAATTGATTGGAAACGCCGTTACGGCAAGTACAAACCCCTTTCTGAACCTGCTAAATGGTTCGTATTCCTTTTCATTTTCTTTCTTTCTTTCTTCTTTTTGTTAGTTTGTCTGTCTCTCTGAAGATGGGTTGCAAATTTTAGTTCTCAAATTGATTGAATGTATCGCAGTCAACTTTGTTCGAAGCGGGCTGTTCGTCAAGCGTATCATAATCTCTGTCCTGGTCAGTTTAATTATCAATATCTCACTTGTTTATGTGGGTTTAATTTGTTCTAAACAAATAATACTTCTAGGGGGAAATATGTCATTATGAACAGGAAGTTGCTCCACCCCTTGTTTATGTGTATCCTAAGTGTTCTACCTGGAACTGATGTTCATGTAGGTTGTGCCAAGCAGCAAGGTGTATGCGCAAAGTGTCGCTGTCGTGTAGACCAAACCATTGGAAGGTGTGTTTATATTCACTACTGAATGTTAATGCCTGAATCTTGTGCACAGAATCTATATTCAAATGTTGATGTCTTTAGCCAAGAAGTTTGTGAAATATTAAGGCCTTTCCATCTGCCCCTTTTGTAGGGATATTTCTGAAGTCGAGGCTGAGCAAAAGATGCTTCAAGAGGTATGATTTGGCACTCATTCGATGGTGATAAATTTTCAACTATAGCTTACAGATTTGGTGATTGCTGCAGGCCATAAAGAATGCTCGAGAAAGGGATAAAAGAACTCTATTACGTGCTGTAAGCTTCCTGTTCTTTTGATTTTGTTTAATTGCCTACAGAATGAATCCATGAAAGAGATTTGGTGAATCAAATAGATTTTTGGCACTTCAAGAACATTCGTCTAGTATTTCAGAATTGAGAGGAGGCTTATGTTTAGCTTTATCACCCCCTATTGTTTTCTGTTTGGGGAAGAGTCTTTTCTCAACCTTACCTACATCTGGCGCTCTTTTGTGTTCATGTGAGGACTCGATATAGAGCTAGTCGTAAATAAGGTTAAACTTAAAAGTTGAGTGAGTTGTTTTGGGTGTGAGGAAATTATTCAAGTAGTCTGCCACAACATAGTTGTCGAGAAATTGTAGAAATACTACTAATTTGTATTTAGTAGTGATTAGAGGCATTTACATCTTCAAACTTGTATTCAATTGATATTAGGGGTAGACACATTGTGGTGGCCTCATTAAATAATTTCCATGAGGTGGTCGTGACATTTTTTATGTTGGTTTGCCCTTCTTCGGTCGGTCATAGCCATAAAGTCTTGTCATTCTTGGAAATACTGGTTGGTATGTTGAAAAATGACACCGCCAACAGTAGGAATTCATTGTGAGGTTTTTTGGGCACCTCTAGGATTCCTTCGAAAGGAATCTCAAAGTGTTTTACCACTTGTTTGTTATGTATTCTGTTAATGGTGGCGCTCTATCCCACTTTAGTTCCTCGGTTTATATCTTCATTCTCATTAAGAATCCTTTTCCTCTGTTTGCTTTGTTGAGGGGTCATTCCTAAATGGAGGTTGCCCTATTTGATGTCTTGATCCTTTTAATGTTTTTCTTTGGTGGGTGTGGTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTCATTCATCTTAGTAAAGCTGGTTCTTTTTCATATAAAATTGAAGTAGCTTTGTAGCTAAGTATCACACTGTCATTTCTAGTGTGATTTTCTTCTGTCACATCCTTTGTTTTGTTTTCTGCAAAGAACATATCCCCATTCACGCATGCTGATGTACGTACGACCATCAATATAGATGCTTGTATATTTACAAGTACATAGCAATGGTTATGAAATTTCTACACCAGCTGCTAAATGAAATGCCCTTGTAGTGTGTTGGTTCCTCTGGTTTTTCCCCCTCTTCCTGCCTGATCCATATTTTAATTTATTTTATTGAAACAGATGGAAAAAGGCAAAAGTAAGACTTCAAATAAGAATAAATCTGCAGATGAAGAAAGTAAGACTGGGGATTCAATTCCTTCGTCAACAGAAGAGCAGGCTGCATTAGGCAGAACAGAGGAGGAGGATGACGACAATGAAAGTACTGATGACACAGATGAAGATGCTATTGAAGACGAAGATGAATGTGAAAATGAAGAGAAGGATAAAGATGAAAACGAGGAATAGTGCATTAATCTTGATTAGGGGTATGATTTTGGCATTAGTCGTTTGATGAACAATTTCTATTTGAAAGGCAATTTTGATGGGTCCTTTTGCTTTTAGGAGTGCGTTTGCTTGTACTATCAAGATCAACTATCGTTTTATAAAAATTTTGACAACACAGCCTGATAAGAATTTGAGATGTTGAGATTTGCAAAGTTATTTGAAAACTGAAAACGAGTTCTACAGGGGAACTTGAG

mRNA sequence

GATCCATCATCGGCTTCAATATTACAAACCCTTCCTTTTTATGTGTGTTCTCGTTCGTATTTTCATTTGGTGTCTGGCTTGTTCTTACTGAATTGGACTTCTCTATTTCTCAATCTGAAAAAAATAAAATTAGGGTTTAGTGCAAAGCCCGCGATACTCAGAATGAGCAGCAAGCACGGTGCTCCGAAGCACCAAAACAAATACGCTTGGAAACCCAACGCCGGCCGCAAAATCAACGAAACGGAGGTTGGAGGCAGATTCCGCCCACTATCCGAGATCACTGGAGTTTGTCTTCGCTGCAAGGACCAAATTGATTGGAAACGCCGTTACGGCAAGTACAAACCCCTTTCTGAACCTGCTAAATGTCAACTTTGTTCGAAGCGGGCTGTTCGTCAAGCGTATCATAATCTCTGTCCTGGTTGTGCCAAGCAGCAAGGTGTATGCGCAAAGTGTCGCTGTCGTGTAGACCAAACCATTGGAAGGGATATTTCTGAAGTCGAGGCTGAGCAAAAGATGCTTCAAGAGGCCATAAAGAATGCTCGAGAAAGGGATAAAAGAACTCTATTACGTGCTATGGAAAAAGGCAAAAGTAAGACTTCAAATAAGAATAAATCTGCAGATGAAGAAAGTAAGACTGGGGATTCAATTCCTTCGTCAACAGAAGAGCAGGCTGCATTAGGCAGAACAGAGGAGGAGGATGACGACAATGAAAGTACTGATGACACAGATGAAGATGCTATTGAAGACGAAGATGAATGTGAAAATGAAGAGAAGGATAAAGATGAAAACGAGGAATAGTGCATTAATCTTGATTAGGGGTATGATTTTGGCATTAGTCGTTTGATGAACAATTTCTATTTGAAAGGCAATTTTGATGGGTCCTTTTGCTTTTAGGAGTGCGTTTGCTTGTACTATCAAGATCAACTATCGTTTTATAAAAATTTTGACAACACAGCCTGATAAGAATTTGAGATGTTGAGATTTGCAAAGTTATTTGAAAACTGAAAACGAGTTCTACAGGGGAACTTGAG

Coding sequence (CDS)

ATGAGCAGCAAGCACGGTGCTCCGAAGCACCAAAACAAATACGCTTGGAAACCCAACGCCGGCCGCAAAATCAACGAAACGGAGGTTGGAGGCAGATTCCGCCCACTATCCGAGATCACTGGAGTTTGTCTTCGCTGCAAGGACCAAATTGATTGGAAACGCCGTTACGGCAAGTACAAACCCCTTTCTGAACCTGCTAAATGTCAACTTTGTTCGAAGCGGGCTGTTCGTCAAGCGTATCATAATCTCTGTCCTGGTTGTGCCAAGCAGCAAGGTGTATGCGCAAAGTGTCGCTGTCGTGTAGACCAAACCATTGGAAGGGATATTTCTGAAGTCGAGGCTGAGCAAAAGATGCTTCAAGAGGCCATAAAGAATGCTCGAGAAAGGGATAAAAGAACTCTATTACGTGCTATGGAAAAAGGCAAAAGTAAGACTTCAAATAAGAATAAATCTGCAGATGAAGAAAGTAAGACTGGGGATTCAATTCCTTCGTCAACAGAAGAGCAGGCTGCATTAGGCAGAACAGAGGAGGAGGATGACGACAATGAAAGTACTGATGACACAGATGAAGATGCTATTGAAGACGAAGATGAATGTGAAAATGAAGAGAAGGATAAAGATGAAAACGAGGAATAG

Protein sequence

MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYKPLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQEAIKNARERDKRTLLRAMEKGKSKTSNKNKSADEESKTGDSIPSSTEEQAALGRTEEEDDDNESTDDTDEDAIEDEDECENEEKDKDENEE
Homology
[Close]
BLAST of Cp4.1LG01g22610 vs. Swiss-Prot
Match: CI085_HUMAN (Uncharacterized protein C9orf85 OS=Homo sapiens GN=C9orf85 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 9.3e-14
Identity = 38/98 (38.78%), Postives = 59/98 (60.20%), Query Frame = 1 

Query: 9   KHQNKYAWKPNAGRKINETE-VGGRFRPLSEITGVCLRCKDQIDWKRRYGKYKPLSEPAK 68
           KHQN +++K +   K  +T+ +  +        GVC RCK+ ++W+ +Y KYKPLS+P K
Sbjct: 15  KHQNTFSFKNDKFDKSVQTKKINAKLHD-----GVCQRCKEVLEWRVKYSKYKPLSKPKK 74

Query: 69  CQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTI 106
           C  C ++ V+ +YH +C  CA +  VCAKC  + D  I
Sbjct: 75  CVKCLQKTVKDSYHIMCRPCACELEVCAKCGKKEDIVI 107

[Close]
BLAST of Cp4.1LG01g22610 vs. Swiss-Prot
Match: CI085_MOUSE (Uncharacterized protein C9orf85 homolog OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.6e-13
Identity = 36/90 (40.00%), Postives = 55/90 (61.11%), Query Frame = 1 

Query: 9  KHQNKYAWKPNAGRKINETE-VGGRFRPLSEITGVCLRCKDQIDWKRRYGKYKPLSEPAK 68
          KHQN + +K +   K  +T+ +  +        GVC RCK+ ++W+ +Y KYKPLS+P K
Sbjct: 15 KHQNTFTFKNDKFDKSVQTKKINAKLHD-----GVCQRCKEVLEWRVKYSKYKPLSKPKK 74

Query: 69 CQLCSKRAVRQAYHNLCPGCAKQQGVCAKC 98
          C  C ++ V+ +YH +C  CA +  VCAKC
Sbjct: 75 CVKCLQKTVKDSYHIMCRPCACELEVCAKC 99

[Close]
BLAST of Cp4.1LG01g22610 vs. Swiss-Prot
Match: CI085_RAT (Uncharacterized protein C9orf85 homolog OS=Rattus norvegicus PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.1e-13
Identity = 36/90 (40.00%), Postives = 55/90 (61.11%), Query Frame = 1 

Query: 9  KHQNKYAWKPNAGRKINETE-VGGRFRPLSEITGVCLRCKDQIDWKRRYGKYKPLSEPAK 68
          KHQN + +K +   K  +T+ +  +        GVC RCK+ ++W+ +Y KYKPLS+P K
Sbjct: 15 KHQNTFTFKNDKFDKSVQTKKINAKLHD-----GVCQRCKEVLEWRVKYSKYKPLSKPKK 74

Query: 69 CQLCSKRAVRQAYHNLCPGCAKQQGVCAKC 98
          C  C ++ V+ +YH +C  CA +  VCAKC
Sbjct: 75 CVKCLQKTVKDSYHIMCRPCACKLEVCAKC 99

[Close]
BLAST of Cp4.1LG01g22610 vs. TrEMBL
Match: A0A0A0KSJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G640570 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 1.8e-85
Identity = 178/213 (83.57%), Postives = 191/213 (89.67%), Query Frame = 1 

Query: 1   MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK 60
           MS+K G PKHQNKYAWKPNAGRKINETEVGGRFRPLS+ITGVCLRCKDQIDWKRRYGKYK
Sbjct: 1   MSNKQGPPKHQNKYAWKPNAGRKINETEVGGRFRPLSDITGVCLRCKDQIDWKRRYGKYK 60

Query: 61  PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ 120
           PLSEP KCQLCSKR VRQAYHNLCPGCAK+QGVCAKCRCRVDQT+GRD+SEVEAEQKMLQ
Sbjct: 61  PLSEPTKCQLCSKRNVRQAYHNLCPGCAKEQGVCAKCRCRVDQTVGRDLSEVEAEQKMLQ 120

Query: 121 EAIKNARERDKRTLLRAMEKGKSKTSNKNKSA-DEESKTGDSIPSSTEEQAALGRTEEED 180
           EAIKNARERD+RTLLRAMEKGK+K+SNKNKSA +EE+K GDSI S TE QA +GR E   
Sbjct: 121 EAIKNARERDRRTLLRAMEKGKAKSSNKNKSAVEEETKDGDSIHSPTEVQAEIGRNE--- 180

Query: 181 DDNESTDDTDEDAIEDED--ECENEEKDKDENE 211
           DDNESTDDTD D  E+ED  ECEN EKD+D  E
Sbjct: 181 DDNESTDDTDGDNYENEDEHECEN-EKDEDGKE 209

[Close]
BLAST of Cp4.1LG01g22610 vs. TrEMBL
Match: A0A061EH91_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_018942 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.2e-65
Identity = 144/212 (67.92%), Postives = 168/212 (79.25%), Query Frame = 1 

Query: 1   MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK 60
           MSS+ G PKHQN YAWKPNAG KINETEVGG+ RP SEITGVC RCK+QIDWKRRYGKYK
Sbjct: 1   MSSRRGPPKHQNHYAWKPNAGIKINETEVGGKLRPFSEITGVCPRCKEQIDWKRRYGKYK 60

Query: 61  PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ 120
           PL+EPAKCQLCSKR VRQAYHNLC GCAK+Q VCAKCRCRVDQ +GRD ++VE EQKML+
Sbjct: 61  PLAEPAKCQLCSKRNVRQAYHNLCSGCAKEQKVCAKCRCRVDQIVGRDSADVEEEQKMLE 120

Query: 121 EAIKNARERDKRTLLRAMEKGKSKTSNKNKSADEESKTGDSIPS-STEEQAALGRTEEED 180
           EAIKNARERD+RTLLRAM K KSK S+K  +  E  + G+  PS S EE A LGR  ++D
Sbjct: 121 EAIKNARERDRRTLLRAMSKSKSKGSSKTTTNKENGRVGEIFPSTSLEEYAKLGR--KDD 180

Query: 181 DDNESTDDTDEDAIEDEDECENEEKDKDENEE 212
            +++   D+  D I D D+ EN+ +D DE+ E
Sbjct: 181 GNHDDCYDSGNDDINDHDDNENDNEDNDEDCE 210

[Close]
BLAST of Cp4.1LG01g22610 vs. TrEMBL
Match: I1LWV1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 6.2e-65
Identity = 142/212 (66.98%), Postives = 167/212 (78.77%), Query Frame = 1 

Query: 2   SSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYKP 61
           + + G PKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVC RCKDQI+WKRRYGKYKP
Sbjct: 6   AKRSGPPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCSRCKDQIEWKRRYGKYKP 65

Query: 62  LSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQE 121
           L +PAKCQ CSKRAVRQAYHNLCPGCAK+ GVCAKC C   Q +GRDISEVEAEQKML+E
Sbjct: 66  LLQPAKCQRCSKRAVRQAYHNLCPGCAKEHGVCAKCCCSTKQIVGRDISEVEAEQKMLEE 125

Query: 122 AIKNARERDKRTLLRAMEKGKSKTSNKNKSADEESKTGDSIP-SSTEEQAALGRTEEEDD 181
           AIKN+RER++R+LLRAM K KSK+SN   +  + +K G   P +S E+ A L R     D
Sbjct: 126 AIKNSRERERRSLLRAMNKDKSKSSNSAPTDTKGNKVGQLFPNASLEDYAKLNRVNVGHD 185

Query: 182 DNESTDDTDEDAIEDEDE-CENEEKDKDENEE 212
           D E  DD++ +  EDED+  +NE+ D+D N +
Sbjct: 186 DGEICDDSEGEVCEDEDDNSDNEDCDEDGNSD 217

[Close]
BLAST of Cp4.1LG01g22610 vs. TrEMBL
Match: C6T9U9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.1e-64
Identity = 142/212 (66.98%), Postives = 167/212 (78.77%), Query Frame = 1 

Query: 2   SSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYKP 61
           + + G PKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVC RCKDQI+WKRRYGKYKP
Sbjct: 6   AKRSGPPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCSRCKDQIEWKRRYGKYKP 65

Query: 62  LSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQE 121
           L +PAKCQ CSKRAVRQAYHNLCPGCAK+ GVCAKC C   Q +GRDISEVEAEQKML+E
Sbjct: 66  LLQPAKCQGCSKRAVRQAYHNLCPGCAKEHGVCAKCCCSTKQIVGRDISEVEAEQKMLEE 125

Query: 122 AIKNARERDKRTLLRAMEKGKSKTSNKNKSADEESKTGDSIP-SSTEEQAALGRTEEEDD 181
           AIKN+RER++R+LLRAM K KSK+SN   +  + +K G   P +S E+ A L R     D
Sbjct: 126 AIKNSRERERRSLLRAMNKDKSKSSNSAPTDTKGNKVGQLFPNASLEDYAKLNRVNVGHD 185

Query: 182 DNESTDDTDEDAIEDEDE-CENEEKDKDENEE 212
           D E  DD++ +  EDED+  +NE+ D+D N +
Sbjct: 186 DGEICDDSEGEVCEDEDDNSDNEDCDEDGNSD 217

[Close]
BLAST of Cp4.1LG01g22610 vs. TrEMBL
Match: A0A0B2PL51_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_042757 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.8e-64
Identity = 141/212 (66.51%), Postives = 167/212 (78.77%), Query Frame = 1 

Query: 2   SSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYKP 61
           + + G PKHQNK+AWKPNAGRKINETEVGGRFRPLSEITGVC RCKDQI+WKRRYGKYKP
Sbjct: 6   AKRSGPPKHQNKFAWKPNAGRKINETEVGGRFRPLSEITGVCSRCKDQIEWKRRYGKYKP 65

Query: 62  LSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQE 121
           L +PAKCQ CSKRAVRQAYHNLCPGCAK+ GVCAKC C   Q +GRDISEVEAEQKML+E
Sbjct: 66  LLQPAKCQRCSKRAVRQAYHNLCPGCAKEHGVCAKCCCSTKQIVGRDISEVEAEQKMLEE 125

Query: 122 AIKNARERDKRTLLRAMEKGKSKTSNKNKSADEESKTGDSIP-SSTEEQAALGRTEEEDD 181
           AIKN+RER++R+LLRAM K KSK+SN   +  + +K G   P +S E+ A L R     D
Sbjct: 126 AIKNSRERERRSLLRAMNKDKSKSSNSAPTDTKGNKVGQLFPNASLEDYAKLNRVNVGHD 185

Query: 182 DNESTDDTDEDAIEDEDE-CENEEKDKDENEE 212
           D E  DD++ +  EDED+  +NE+ D+D N +
Sbjct: 186 DGEICDDSEGEVCEDEDDNSDNEDCDEDGNSD 217

[Close]
BLAST of Cp4.1LG01g22610 vs. TAIR10
Match: AT3G02220.1 (AT3G02220.1 unknown protein)

HSP 1 Score: 213.8 bits (543), Expect = 1.0e-55
Identity = 131/223 (58.74%), Postives = 155/223 (69.51%), Query Frame = 1 

Query: 1   MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK 60
           M S+ G PKHQNK+AW P AG KINETEVGGRFRPLSEITGVC RC++QI WKR+YGKYK
Sbjct: 1   MGSRQGPPKHQNKFAWVPKAGVKINETEVGGRFRPLSEITGVCYRCREQIAWKRKYGKYK 60

Query: 61  PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ 120
            L+E  KCQ C+KR VRQAYH LCPGCAK+Q VCAKC   VDQ +GRDI EVEAEQK+L 
Sbjct: 61  TLTEATKCQKCTKRNVRQAYHKLCPGCAKEQKVCAKCCQSVDQILGRDIYEVEAEQKLLD 120

Query: 121 EAIKNARERDKRTLLRAMEK-GKSKTSNKNKSADEESKTGDSIPSSTEEQAA-------- 180
           E IKNARERD+RTLLRAM K  K   S++  S  + SK GD  PS++ E+ A        
Sbjct: 121 ETIKNARERDRRTLLRAMNKDNKPNKSDEEASRSDSSKVGDVFPSTSLEEYANKSGRVSG 180

Query: 181 ---LGRTEEEDDDNESTDDTDEDAIEDEDECENEEKDKDENEE 212
               G   +   D+ S  ++DED    +DE +  E D DENE+
Sbjct: 181 IIGHGSVPDHAHDDASGPESDEDDNVGDDEHDLRE-DSDENEQ 222

[Close]
BLAST of Cp4.1LG01g22610 vs. NCBI nr
Match: gi|659118952|ref|XP_008459394.1| (PREDICTED: uncharacterized protein LOC103498541 [Cucumis melo])

HSP 1 Score: 328.9 bits (842), Expect = 6.3e-87
Identity = 176/210 (83.81%), Postives = 191/210 (90.95%), Query Frame = 1 

Query: 1   MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK 60
           MS+K G PKHQN+YAWKPNAGRKINETEVGGRFRPLS+ITGVCLRCKDQIDWKRRYGKYK
Sbjct: 1   MSNKQGPPKHQNRYAWKPNAGRKINETEVGGRFRPLSDITGVCLRCKDQIDWKRRYGKYK 60

Query: 61  PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ 120
           PLSEPAKCQLCSKR VRQAYHNLCPGCAK+QGVCAKCRCRVDQT+GRD+SEVEAEQKMLQ
Sbjct: 61  PLSEPAKCQLCSKRNVRQAYHNLCPGCAKEQGVCAKCRCRVDQTVGRDLSEVEAEQKMLQ 120

Query: 121 EAIKNARERDKRTLLRAMEKGKSKTSNKNKSA-DEESKTGDSIPSSTEEQAALGRTEEED 180
           EAIKNARERD+RTLLRAMEKGK+K+SNKNKSA  EE+K GDSI S TE+QA +GR E   
Sbjct: 121 EAIKNARERDRRTLLRAMEKGKAKSSNKNKSAVTEETKVGDSIHSPTEDQAEIGRNE--- 180

Query: 181 DDNESTDDTDEDAIEDED--ECENEEKDKD 208
           DDNE TDDTD+D  E+ED  ECENEE DK+
Sbjct: 181 DDNEITDDTDDDNYENEDEHECENEENDKE 207

[Close]
BLAST of Cp4.1LG01g22610 vs. NCBI nr
Match: gi|449447428|ref|XP_004141470.1| (PREDICTED: uncharacterized protein LOC101206376 [Cucumis sativus])

HSP 1 Score: 323.6 bits (828), Expect = 2.6e-85
Identity = 178/213 (83.57%), Postives = 191/213 (89.67%), Query Frame = 1 

Query: 1   MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK 60
           MS+K G PKHQNKYAWKPNAGRKINETEVGGRFRPLS+ITGVCLRCKDQIDWKRRYGKYK
Sbjct: 1   MSNKQGPPKHQNKYAWKPNAGRKINETEVGGRFRPLSDITGVCLRCKDQIDWKRRYGKYK 60

Query: 61  PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ 120
           PLSEP KCQLCSKR VRQAYHNLCPGCAK+QGVCAKCRCRVDQT+GRD+SEVEAEQKMLQ
Sbjct: 61  PLSEPTKCQLCSKRNVRQAYHNLCPGCAKEQGVCAKCRCRVDQTVGRDLSEVEAEQKMLQ 120

Query: 121 EAIKNARERDKRTLLRAMEKGKSKTSNKNKSA-DEESKTGDSIPSSTEEQAALGRTEEED 180
           EAIKNARERD+RTLLRAMEKGK+K+SNKNKSA +EE+K GDSI S TE QA +GR E   
Sbjct: 121 EAIKNARERDRRTLLRAMEKGKAKSSNKNKSAVEEETKDGDSIHSPTEVQAEIGRNE--- 180

Query: 181 DDNESTDDTDEDAIEDED--ECENEEKDKDENE 211
           DDNESTDDTD D  E+ED  ECEN EKD+D  E
Sbjct: 181 DDNESTDDTDGDNYENEDEHECEN-EKDEDGKE 209

[Close]
BLAST of Cp4.1LG01g22610 vs. NCBI nr
Match: gi|1009126901|ref|XP_015880408.1| (PREDICTED: uncharacterized protein C9orf85 homolog [Ziziphus jujuba])

HSP 1 Score: 265.4 bits (677), Expect = 8.6e-68
Identity = 143/202 (70.79%), Postives = 165/202 (81.68%), Query Frame = 1 

Query: 1   MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK 60
           MS++ G PKHQNKYAWKPNAG KINETEVGGR RP SEITGVCLRCK+QIDWKRRYGKYK
Sbjct: 2   MSNRQGPPKHQNKYAWKPNAGHKINETEVGGRLRPYSEITGVCLRCKEQIDWKRRYGKYK 61

Query: 61  PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ 120
           PL+EPAKCQ CSKRAVRQAYHNLC GCAK+QGVCAKC  RVD  +GRD SEVEAEQKML+
Sbjct: 62  PLTEPAKCQRCSKRAVRQAYHNLCSGCAKEQGVCAKCCSRVDSVVGRDSSEVEAEQKMLE 121

Query: 121 EAIKNARERDKRTLLRAMEKGKSKTSNKNKSADEESKTGDSIPSST-EEQAALGRTEEED 180
           EAIKNARERD+RT+LR M KGKS +  K ++  EE+K G+  PSST EE A   R ++ D
Sbjct: 122 EAIKNARERDRRTILRTMNKGKSNSLGKTRT--EENKVGELFPSSTLEEYAKSSRDKKND 181

Query: 181 DDNESTDDTDEDAIEDEDECEN 202
           D++++ DD DE+  E+E   EN
Sbjct: 182 DNSDNEDDEDEEGEEEEAGEEN 201

[Close]
BLAST of Cp4.1LG01g22610 vs. NCBI nr
Match: gi|590651214|ref|XP_007032841.1| (Uncharacterized protein TCM_018942 [Theobroma cacao])

HSP 1 Score: 257.7 bits (657), Expect = 1.8e-65
Identity = 144/212 (67.92%), Postives = 168/212 (79.25%), Query Frame = 1 

Query: 1   MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK 60
           MSS+ G PKHQN YAWKPNAG KINETEVGG+ RP SEITGVC RCK+QIDWKRRYGKYK
Sbjct: 1   MSSRRGPPKHQNHYAWKPNAGIKINETEVGGKLRPFSEITGVCPRCKEQIDWKRRYGKYK 60

Query: 61  PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ 120
           PL+EPAKCQLCSKR VRQAYHNLC GCAK+Q VCAKCRCRVDQ +GRD ++VE EQKML+
Sbjct: 61  PLAEPAKCQLCSKRNVRQAYHNLCSGCAKEQKVCAKCRCRVDQIVGRDSADVEEEQKMLE 120

Query: 121 EAIKNARERDKRTLLRAMEKGKSKTSNKNKSADEESKTGDSIPS-STEEQAALGRTEEED 180
           EAIKNARERD+RTLLRAM K KSK S+K  +  E  + G+  PS S EE A LGR  ++D
Sbjct: 121 EAIKNARERDRRTLLRAMSKSKSKGSSKTTTNKENGRVGEIFPSTSLEEYAKLGR--KDD 180

Query: 181 DDNESTDDTDEDAIEDEDECENEEKDKDENEE 212
            +++   D+  D I D D+ EN+ +D DE+ E
Sbjct: 181 GNHDDCYDSGNDDINDHDDNENDNEDNDEDCE 210

[Close]
BLAST of Cp4.1LG01g22610 vs. NCBI nr
Match: gi|720006470|ref|XP_010257991.1| (PREDICTED: uncharacterized protein C9orf85 homolog [Nelumbo nucifera])

HSP 1 Score: 255.4 bits (651), Expect = 8.9e-65
Identity = 132/190 (69.47%), Postives = 151/190 (79.47%), Query Frame = 1 

Query: 1   MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK 60
           MS++HG PKHQNKY WKPNAG K NETE+GG+FRP S+ITGVC RCKDQI+WKRRYGKYK
Sbjct: 1   MSNRHGPPKHQNKYVWKPNAGHKKNETELGGKFRPFSDITGVCARCKDQIEWKRRYGKYK 60

Query: 61  PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ 120
           PL+EPAKCQ CSKRAVRQAYHNLC  CAK Q VCAKC C VDQ IGRD SE+EAE+K L+
Sbjct: 61  PLTEPAKCQRCSKRAVRQAYHNLCSACAKDQNVCAKCCCHVDQIIGRDCSEIEAEEKTLE 120

Query: 121 EAIKNARERDKRTLLRAMEKGKSKTSNKNKSADEESKTGDSIP-SSTEEQAALGRTEEED 180
           EAIKNARERD+RTLLRAM KGKS T+ K  +  E +K G+  P +S +E A L R   ED
Sbjct: 121 EAIKNARERDRRTLLRAMNKGKSNTTVKTTTNGERNKVGELFPAASLDEYADLSR---ED 180

Query: 181 DDNESTDDTD 190
           D+ +  DD D
Sbjct: 181 DNEDEYDDDD 187

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g22610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CI085_HUMAN9.3e-1438.78Uncharacterized protein C9orf85 OS=Homo sapiens GN=C9orf85 PE=1 SV=1[more]
CI085_MOUSE1.6e-1340.00Uncharacterized protein C9orf85 homolog OS=Mus musculus PE=2 SV=1[more]
CI085_RAT2.1e-1340.00Uncharacterized protein C9orf85 homolog OS=Rattus norvegicus PE=1 SV=1[more]
BLAST of Cp4.1LG01g22610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSJ8_CUCSA1.8e-8583.57Uncharacterized protein OS=Cucumis sativus GN=Csa_5G640570 PE=4 SV=1[more]
A0A061EH91_THECC1.2e-6567.92Uncharacterized protein OS=Theobroma cacao GN=TCM_018942 PE=4 SV=1[more]
I1LWV1_SOYBN6.2e-6566.98Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
C6T9U9_SOYBN1.1e-6466.98Putative uncharacterized protein OS=Glycine max PE=2 SV=1[more]
A0A0B2PL51_GLYSO1.8e-6466.51Uncharacterized protein OS=Glycine soja GN=glysoja_042757 PE=4 SV=1[more]
BLAST of Cp4.1LG01g22610 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G02220.11.0e-5558.74 unknown protein[more]
BLAST of Cp4.1LG01g22610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659118952|ref|XP_008459394.1|6.3e-8783.81PREDICTED: uncharacterized protein LOC103498541 [Cucumis melo][more]
gi|449447428|ref|XP_004141470.1|2.6e-8583.57PREDICTED: uncharacterized protein LOC101206376 [Cucumis sativus][more]
gi|1009126901|ref|XP_015880408.1|8.6e-6870.79PREDICTED: uncharacterized protein C9orf85 homolog [Ziziphus jujuba][more]
gi|590651214|ref|XP_007032841.1|1.8e-6567.92Uncharacterized protein TCM_018942 [Theobroma cacao][more]
gi|720006470|ref|XP_010257991.1|8.9e-6569.47PREDICTED: uncharacterized protein C9orf85 homolog [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019351DUF2039
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006333 chromatin assembly or disassembly
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0001510 RNA methylation
biological_process GO:0016070 RNA metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g22610.1Cp4.1LG01g22610.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019351Protein of unknown function DUF2039PFAMPF10217DUF2039coord: 8..98
score: 4.2
NoneNo IPR availableunknownCoilCoilcoord: 192..211
score: -coord: 109..129
scor
NoneNo IPR availablePANTHERPTHR22876FAMILY NOT NAMEDcoord: 1..211
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g22610Cucsa.157750Cucumber (Gy14) v1cgycpeB0425
Cp4.1LG01g22610CmaCh04G028070Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g22610CmoCh04G029360Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g22610Cla016509Watermelon (97103) v1cpewmB462
Cp4.1LG01g22610Csa5G640570Cucumber (Chinese Long) v2cpecuB415
Cp4.1LG01g22610MELO3C022042Melon (DHL92) v3.5.1cpemeB358
Cp4.1LG01g22610ClCG11G004890Watermelon (Charleston Gray)cpewcgB355
Cp4.1LG01g22610CSPI05G29480Wild cucumber (PI 183967)cpecpiB414
Cp4.1LG01g22610MELO3C022042.2Melon (DHL92) v3.6.1cpemedB418
Cp4.1LG01g22610CsaV3_5G038620Cucumber (Chinese Long) v3cpecucB0517
Cp4.1LG01g22610Bhi06G000250Wax gourdcpewgoB0500
Cp4.1LG01g22610CsGy5G028930Cucumber (Gy14) v2cgybcpeB625
Cp4.1LG01g22610Carg05889Silver-seed gourdcarcpeB0034
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g22610Wax gourdcpewgoB0502
Cp4.1LG01g22610Cucurbita pepo (Zucchini)cpecpeB199
Cp4.1LG01g22610Cucumber (Gy14) v1cgycpeB0255
Cp4.1LG01g22610Cucurbita maxima (Rimu)cmacpeB317
Cp4.1LG01g22610Cucurbita moschata (Rifu)cmocpeB279
Cp4.1LG01g22610Wild cucumber (PI 183967)cpecpiB380
Cp4.1LG01g22610Bottle gourd (USVL1VR-Ls)cpelsiB330
Cp4.1LG01g22610Bottle gourd (USVL1VR-Ls)cpelsiB339
Cp4.1LG01g22610Melon (DHL92) v3.6.1cpemedB408
Cp4.1LG01g22610Silver-seed gourdcarcpeB0374
Cp4.1LG01g22610Cucumber (Chinese Long) v3cpecucB0472