Carg05889 (gene) Silver-seed gourd

Overview
NameCarg05889
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionChromosome 9 open reading frame 85
LocationCucurbita_argyrosperma_scaffold_026 : 83254 .. 86089 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTAAAGGTACGAACTTTTGTTGAGATACATCAGCGGCTTCAATATTACAAACCCTTCCTTTTTATATTTGTGTTCTCTTTCGTATTTTCATTTGGTGTCTGGCTTGTTCTTGCTGAATTGGACAGCTCTATTTCTCAATCTGAAAAAAAGAAAATTAGGGTTCAGTGCAAAGCCCGCGATACTCAGAATGAGCAGCAAGCACGGTGCTCCGAAGCACCAAAACAAATACGCTTGGAAACCCAACGCCGGCCGCAAAATCAACGAAACGGAGGTTGGAGGCAGATTCCGCCCACTATCCGAGATCACTGGAGTTTGTCTTCGCTGCAAGGACCAAATTGATTGGAAACGCCGTTACGGCAAGTACAAACCCCTTTCTGAACCTGCTAAATGGTGCGTATTCCTTTTCATTTTCTTTCTTTCTTTCTTCTGTTTGTTAATTTGTCTGTCTCTCTGAAGATGGGTTGCAAATTTTAGTTCTCGAATTGATTGAATGTATCGCAGTCAACTTTGTTCGAAGCGAGCTGTTCGTCAAGCGTATCATAATCTCTGTCCTGGTCAGTTTAATTCTCAGTATCTCACTTGTTTATGTGGGTTTAATTTGTTCTAAACAAATAATACTTCTAGGGGGAAATATGTCATTATGAACAGGAAGTTGTTCCACCCCTTGTTTATGTGTATCCTAAGTTTTCTACCTGGAACTGATGTTCATGTAGGCTGTGCCAAGCAGCAAGGTGTATGTGCAAAGTGTCGCTGTCGTGTAGACCAAACCATTGGAAGGTGTGTTTATATTCATTACTGAATGTTAATGCCTGAATCTTGTGCACTGAATCTATATTCAAATGTTGATGTCTTTAGCCAAGAAGTTTGTGAAATATTAAGGCCTTTCCATCTGCCCCTTTTGTAGGGATATTTCTGAAGTCGAGGCTGAGCAAAAGATGCTTCAAGAGGTATGATTTGGCACTCATTCGATGGTGATAAATTTTCAACTATAGCTTACAGATTTGGTGATTGCTGCAGGCCATAAAGAATGCTCGAGAAAGGGATAAAAGAACTCTATTACGTGCTGTAAGCTTCCTGTTCTTTTGATTTTGTTTAATTGCCTACAGAATGAATCCATGAAAGAGATTTGGTGAATCAAATAGATTTTTGGCACTTCAAGAACATTCGCCTAGTATTTCAGAATTGAGAGGAGGCTTATGTTTAGCTTTATCACCCCCTATTGTTTTCTGTTTGGGGAAGAGTCTTTTCTCAACCTTACCTACATCTAGCGCTCTTTTGTGTTCATGTGAGGACTCGATATAGAGCTAGTCGTAAATAAGGTTAAACTTAAAAGTTGAGTGAGTTGTTTTGGGTGTGAGGAAATTATTCAAGTAGTCTGCCACAACATAGTTGTCGAGAAATTGTAGAAATACTACTAATTTGTATTTAGTAGTGATTAGAGGCATTTACATCTTCAAACTTGTATTCAATTGATATTAGGGGTAGACACATTGTGGTGGCCTCATTAAATAATTTCCATCAGGTGGTCGTGACATTTTTTATGTTGGTTTGCCCTTCTTCGGTCGGTCATAGCCATAAAGTCTTGTCAATCTAGGAAATACTGGTTGGTATGTTGAAAAATGACACCGCCAACAGTAGGAATTCATTGTGAGGTTTTTTGGGCACCCCTAGGATTCCTTCGAAAGGAATCTCAAATAGTTTTACCACTTGTTTGTTATGTATTCTGTTAATGGTGGCGGATCCTTTGGCTTTTTGATAGCTCTATCCCACTTTAATTCCTCGGTTTATATCTTCATTCTCACTAAGAATCCTTTTCCTCTGTTTGCTTTGTTGAGGGGTCATTCCTAAATGGAGGTTGCCCTATTTGATGTCTTGATCCTTTTAATGTTTTTCTTTGGTGGGTGTTTTTTTTTTCTTTTTCTCATTCATCTTAGTAAAGCTCGTTCTTTTTCATATAAAATTTAAGTAGCTTTGTAGCTAAGTATCACATTGTCATTTCTAGTGTGATTTTCTTCTGTCACATCCTTTGTTTTGTTTTCTGCAAAGAACATATCCCCATTCACGCATGCTGATGTACATACGACCATCAAATATTGATGCTTGTATATTTACAAGTACATAGCAATGCTTATGAAATTTCTACACCAGCTGCTAAATGAAATGCCCTTGTAGTGTGTGTGTTAGTTCCTCTGGTTTTTCCCCCTCTTCCTGCCTGATGCATATTTTAATTTATTTTATTGAAACAGATGGAAAAAGGCAAAAGTAAGACTTCAAATAAGAATAAATCTGCAGATGAAGAAAGTAAGACTGGCGATTCAATTCCTTCGTCAACAGAAGAGCAGGCTGCATTAGGCAGAACAGAGGACGACGACGACAATGAAAGTACTGATGACACAGATGAAGATGCTATTGAGGACGAAGATGAATGTGAAAATGAAGAGAAGGATAAAGATGAAAACGAGGAATAGTACATTAATCTTGATTAGGGGAATGATTTTGGCATGCGTCGTTTGATGAACAATTTCTATTTGAAAGGCAATTTTGATGGGTCCTTTTGTTTTTAGGAGTGCGTTTGCTTGTACTATCAAGATCAACTATCGTTTTATAAAAATTTTGACAACACAGCCTGATAAGAATTTGGGATGTTTGAGATTTGCAAAATTATTTGAAAACTGAAAACAACTACGTGGAAACTTGAGTAATGCTGAACAGAAATTTTTTTTGAAAATAAAAGTAGATGGGAGTGGGATTTTGCCATATTCATTCAATGATTTTGAGTTGTGAGAAATTAAAGAGACTTAATGCAAATGTAAGTCAAAAGAGATCGAGATGGC

mRNA sequence

AATTAAAGGTACGAACTTTTGTTGAGATACATCAGCGGCTTCAATATTACAAACCCTTCCTTTTTATATTTGTGTTCTCTTTCGTATTTTCATTTGGTGTCTGGCTTGTTCTTGCTGAATTGGACAGCTCTATTTCTCAATCTGAAAAAAAGAAAATTAGGGTTCAGTGCAAAGCCCGCGATACTCAGAATGAGCAGCAAGCACGGTGCTCCGAAGCACCAAAACAAATACGCTTGGAAACCCAACGCCGGCCGCAAAATCAACGAAACGGAGGTTGGAGGCAGATTCCGCCCACTATCCGAGATCACTGGAGTTTGTCTTCGCTGCAAGGACCAAATTGATTGGAAACGCCGTTACGGCAAGTACAAACCCCTTTCTGAACCTGCTAAATGTCAACTTTGTTCGAAGCGAGCTGTTCGTCAAGCGTATCATAATCTCTGTCCTGGCTGTGCCAAGCAGCAAGGTGTATGTGCAAAGTGTCGCTGTCGTGTAGACCAAACCATTGGAAGGGATATTTCTGAAGTCGAGGCTGAGCAAAAGATGCTTCAAGAGGCCATAAAGAATGCTCGAGAAAGGGATAAAAGAACTCTATTACGTGCTATGGAAAAAGGCAAAAGTAAGACTTCAAATAAGAATAAATCTGCAGATGAAGAAAGTAAGACTGGCGATTCAATTCCTTCGTCAACAGAAGAGCAGGCTGCATTAGGCAGAACAGAGGACGACGACGACAATGAAAGTACTGATGACACAGATGAAGATGCTATTGAGGACGAAGATGAATGTGAAAATGAAGAGAAGGATAAAGATGAAAACGAGGAATAGTACATTAATCTTGATTAGGGGAATGATTTTGGCATGCGTCGTTTGATGAACAATTTCTATTTGAAAGGCAATTTTGATGGGTCCTTTTGTTTTTAGGAGTGCGTTTGCTTGTACTATCAAGATCAACTATCGTTTTATAAAAATTTTGACAACACAGCCTGATAAGAATTTGGGATGTTTGAGATTTGCAAAATTATTTGAAAACTGAAAACAACTACGTGGAAACTTGAGTAATGCTGAACAGAAATTTTTTTTGAAAATAAAAGTAGATGGGAGTGGGATTTTGCCATATTCATTCAATGATTTTGAGTTGTGAGAAATTAAAGAGACTTAATGCAAATGTAAGTCAAAAGAGATCGAGATGGC

Coding sequence (CDS)

ATGAGCAGCAAGCACGGTGCTCCGAAGCACCAAAACAAATACGCTTGGAAACCCAACGCCGGCCGCAAAATCAACGAAACGGAGGTTGGAGGCAGATTCCGCCCACTATCCGAGATCACTGGAGTTTGTCTTCGCTGCAAGGACCAAATTGATTGGAAACGCCGTTACGGCAAGTACAAACCCCTTTCTGAACCTGCTAAATGTCAACTTTGTTCGAAGCGAGCTGTTCGTCAAGCGTATCATAATCTCTGTCCTGGCTGTGCCAAGCAGCAAGGTGTATGTGCAAAGTGTCGCTGTCGTGTAGACCAAACCATTGGAAGGGATATTTCTGAAGTCGAGGCTGAGCAAAAGATGCTTCAAGAGGCCATAAAGAATGCTCGAGAAAGGGATAAAAGAACTCTATTACGTGCTATGGAAAAAGGCAAAAGTAAGACTTCAAATAAGAATAAATCTGCAGATGAAGAAAGTAAGACTGGCGATTCAATTCCTTCGTCAACAGAAGAGCAGGCTGCATTAGGCAGAACAGAGGACGACGACGACAATGAAAGTACTGATGACACAGATGAAGATGCTATTGAGGACGAAGATGAATGTGAAAATGAAGAGAAGGATAAAGATGAAAACGAGGAATAG

Protein sequence

MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYKPLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQEAIKNARERDKRTLLRAMEKGKSKTSNKNKSADEESKTGDSIPSSTEEQAALGRTEDDDDNESTDDTDEDAIEDEDECENEEKDKDENEE
Homology
[Close]
BLAST of Carg05889 vs. NCBI nr
Match: XP_022990906.1 (ribosome biogenesis protein BOP1 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 309.3 bits (791), Expect = 1.0e-80
Identity = 161/164 (98.17%), Postives = 162/164 (98.78%), Query Frame = 0 

Query: 1   MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK 60
           M+SKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK
Sbjct: 1   MNSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK 60

Query: 61  PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ 120
           PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ
Sbjct: 61  PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ 120

Query: 121 EAIKNARERDKRTLLRAMEKGKSKTSXXXXXXXXXXXXGDSIPS 165
           EAIKNARERDKRTLLRAMEKGKSKTSXXXXXXXXXX  GDSIPS
Sbjct: 121 EAIKNARERDKRTLLRAMEKGKSKTSXXXXXXXXXXKTGDSIPS 164

[Close]
BLAST of Carg05889 vs. NCBI nr
Match: XP_023538167.1 (glutamic acid-rich protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 297.7 bits (761), Expect = 3.0e-77
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK 60
           MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK
Sbjct: 1   MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK 60

Query: 61  PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ 120
           PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ
Sbjct: 61  PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ 120

Query: 121 EAIKNARERDKRTLLRAMEKGKS 144
           EAIKNARERDKRTLLRAMEKGKS
Sbjct: 121 EAIKNARERDKRTLLRAMEKGKS 143

[Close]
BLAST of Carg05889 vs. NCBI nr
Match: XP_022954477.1 (glutamic acid-rich protein isoform X1 [Cucurbita moschata])

HSP 1 Score: 296.2 bits (757), Expect = 8.8e-77
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0 

Query: 1   MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK 60
           MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK
Sbjct: 1   MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK 60

Query: 61  PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ 120
           PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ
Sbjct: 61  PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ 120

Query: 121 EAIKNARERDKRTLLRAMEKGK 143
           EAIKNARERDKRTLLRAMEKGK
Sbjct: 121 EAIKNARERDKRTLLRAMEKGK 142

[Close]
BLAST of Carg05889 vs. NCBI nr
Match: XP_008459394.1 (PREDICTED: uncharacterized protein LOC103498541 [Cucumis melo])

HSP 1 Score: 286.2 bits (731), Expect = 9.1e-74
Identity = 134/146 (91.78%), Postives = 143/146 (97.95%), Query Frame = 0 

Query: 1   MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK 60
           MS+K G PKHQN+YAWKPNAGRKINETEVGGRFRPLS+ITGVCLRCKDQIDWKRRYGKYK
Sbjct: 1   MSNKQGPPKHQNRYAWKPNAGRKINETEVGGRFRPLSDITGVCLRCKDQIDWKRRYGKYK 60

Query: 61  PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ 120
           PLSEPAKCQLCSKR VRQAYHNLCPGCAK+QGVCAKCRCRVDQT+GRD+SEVEAEQKMLQ
Sbjct: 61  PLSEPAKCQLCSKRNVRQAYHNLCPGCAKEQGVCAKCRCRVDQTVGRDLSEVEAEQKMLQ 120

Query: 121 EAIKNARERDKRTLLRAMEKGKSKTS 147
           EAIKNARERD+RTLLRAMEKGK+K+S
Sbjct: 121 EAIKNARERDRRTLLRAMEKGKAKSS 146

[Close]
BLAST of Carg05889 vs. NCBI nr
Match: XP_004141470.1 (PREDICTED: uncharacterized protein LOC101206376 [Cucumis sativus] >KGN52523.1 hypothetical protein Csa_5G640570 [Cucumis sativus])

HSP 1 Score: 280.0 bits (715), Expect = 6.5e-72
Identity = 131/141 (92.91%), Postives = 137/141 (97.16%), Query Frame = 0 

Query: 1   MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK 60
           MS+K G PKHQNKYAWKPNAGRKINETEVGGRFRPLS+ITGVCLRCKDQIDWKRRYGKYK
Sbjct: 1   MSNKQGPPKHQNKYAWKPNAGRKINETEVGGRFRPLSDITGVCLRCKDQIDWKRRYGKYK 60

Query: 61  PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ 120
           PLSEP KCQLCSKR VRQAYHNLCPGCAK+QGVCAKCRCRVDQT+GRD+SEVEAEQKMLQ
Sbjct: 61  PLSEPTKCQLCSKRNVRQAYHNLCPGCAKEQGVCAKCRCRVDQTVGRDLSEVEAEQKMLQ 120

Query: 121 EAIKNARERDKRTLLRAMEKG 142
           EAIKNARERD+RTLLRAMEKG
Sbjct: 121 EAIKNARERDRRTLLRAMEKG 141

[Close]
BLAST of Carg05889 vs. TAIR10
Match: AT3G02220.1 (unknown protein)

HSP 1 Score: 223.0 bits (567), Expect = 1.7e-58
Identity = 112/165 (67.88%), Postives = 123/165 (74.55%), Query Frame = 0 

Query: 1   MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK 60
           M S+ G PKHQNK+AW P AG KINETEVGGRFRPLSEITGVC RC++QI WKR+YGKYK
Sbjct: 1   MGSRQGPPKHQNKFAWVPKAGVKINETEVGGRFRPLSEITGVCYRCREQIAWKRKYGKYK 60

Query: 61  PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ 120
            L+E  KCQ C+KR VRQAYH LCPGCAK+Q VCAKC   VDQ +GRDI EVEAEQK+L 
Sbjct: 61  TLTEATKCQKCTKRNVRQAYHKLCPGCAKEQKVCAKCCQSVDQILGRDIYEVEAEQKLLD 120

Query: 121 EAIKNARERDKRTLLRAMEK-GKSKTSXXXXXXXXXXXXGDSIPS 165
           E IKNARERD+RTLLRAM K  K   S            GD  PS
Sbjct: 121 ETIKNARERDRRTLLRAMNKDNKPNKSDEEASRSDSSKVGDVFPS 165

[Close]
BLAST of Carg05889 vs. Swiss-Prot
Match: sp|Q96MD7|CI085_HUMAN (Uncharacterized protein C9orf85 OS=Homo sapiens OX=9606 GN=C9orf85 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 9.4e-14
Identity = 36/98 (36.73%), Postives = 58/98 (59.18%), Query Frame = 0 

Query: 9   KHQNKYAWKPNA-GRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYKPLSEPAK 68
           KHQN +++K +   + +   ++  +        GVC RCK+ ++W+ +Y KYKPLS+P K
Sbjct: 15  KHQNTFSFKNDKFDKSVQTKKINAKLH-----DGVCQRCKEVLEWRVKYSKYKPLSKPKK 74

Query: 69  CQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTI 106
           C  C ++ V+ +YH +C  CA +  VCAKC  + D  I
Sbjct: 75  CVKCLQKTVKDSYHIMCRPCACELEVCAKCGKKEDIVI 107

[Close]
BLAST of Carg05889 vs. Swiss-Prot
Match: sp|Q9CQ90|CI085_MOUSE (Uncharacterized protein C9orf85 homolog OS=Mus musculus OX=10090 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.6e-13
Identity = 34/90 (37.78%), Postives = 54/90 (60.00%), Query Frame = 0 

Query: 9  KHQNKYAWKPNA-GRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYKPLSEPAK 68
          KHQN + +K +   + +   ++  +        GVC RCK+ ++W+ +Y KYKPLS+P K
Sbjct: 15 KHQNTFTFKNDKFDKSVQTKKINAKLH-----DGVCQRCKEVLEWRVKYSKYKPLSKPKK 74

Query: 69 CQLCSKRAVRQAYHNLCPGCAKQQGVCAKC 98
          C  C ++ V+ +YH +C  CA +  VCAKC
Sbjct: 75 CVKCLQKTVKDSYHIMCRPCACELEVCAKC 99

[Close]
BLAST of Carg05889 vs. Swiss-Prot
Match: sp|Q68FU5|CI085_RAT (Uncharacterized protein C9orf85 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.1e-13
Identity = 34/90 (37.78%), Postives = 54/90 (60.00%), Query Frame = 0 

Query: 9  KHQNKYAWKPNA-GRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYKPLSEPAK 68
          KHQN + +K +   + +   ++  +        GVC RCK+ ++W+ +Y KYKPLS+P K
Sbjct: 15 KHQNTFTFKNDKFDKSVQTKKINAKLH-----DGVCQRCKEVLEWRVKYSKYKPLSKPKK 74

Query: 69 CQLCSKRAVRQAYHNLCPGCAKQQGVCAKC 98
          C  C ++ V+ +YH +C  CA +  VCAKC
Sbjct: 75 CVKCLQKTVKDSYHIMCRPCACKLEVCAKC 99

[Close]
BLAST of Carg05889 vs. TrEMBL
Match: tr|A0A1S3CAL0|A0A1S3CAL0_CUCME (uncharacterized protein LOC103498541 OS=Cucumis melo OX=3656 GN=LOC103498541 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 6.0e-74
Identity = 134/146 (91.78%), Postives = 143/146 (97.95%), Query Frame = 0 

Query: 1   MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK 60
           MS+K G PKHQN+YAWKPNAGRKINETEVGGRFRPLS+ITGVCLRCKDQIDWKRRYGKYK
Sbjct: 1   MSNKQGPPKHQNRYAWKPNAGRKINETEVGGRFRPLSDITGVCLRCKDQIDWKRRYGKYK 60

Query: 61  PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ 120
           PLSEPAKCQLCSKR VRQAYHNLCPGCAK+QGVCAKCRCRVDQT+GRD+SEVEAEQKMLQ
Sbjct: 61  PLSEPAKCQLCSKRNVRQAYHNLCPGCAKEQGVCAKCRCRVDQTVGRDLSEVEAEQKMLQ 120

Query: 121 EAIKNARERDKRTLLRAMEKGKSKTS 147
           EAIKNARERD+RTLLRAMEKGK+K+S
Sbjct: 121 EAIKNARERDRRTLLRAMEKGKAKSS 146

[Close]
BLAST of Carg05889 vs. TrEMBL
Match: tr|A0A0A0KSJ8|A0A0A0KSJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G640570 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 4.3e-72
Identity = 131/141 (92.91%), Postives = 137/141 (97.16%), Query Frame = 0 

Query: 1   MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK 60
           MS+K G PKHQNKYAWKPNAGRKINETEVGGRFRPLS+ITGVCLRCKDQIDWKRRYGKYK
Sbjct: 1   MSNKQGPPKHQNKYAWKPNAGRKINETEVGGRFRPLSDITGVCLRCKDQIDWKRRYGKYK 60

Query: 61  PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ 120
           PLSEP KCQLCSKR VRQAYHNLCPGCAK+QGVCAKCRCRVDQT+GRD+SEVEAEQKMLQ
Sbjct: 61  PLSEPTKCQLCSKRNVRQAYHNLCPGCAKEQGVCAKCRCRVDQTVGRDLSEVEAEQKMLQ 120

Query: 121 EAIKNARERDKRTLLRAMEKG 142
           EAIKNARERD+RTLLRAMEKG
Sbjct: 121 EAIKNARERDRRTLLRAMEKG 141

[Close]
BLAST of Carg05889 vs. TrEMBL
Match: tr|A0A2P5E954|A0A2P5E954_9ROSA (Small acidic-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_220700 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 5.8e-69
Identity = 126/146 (86.30%), Postives = 137/146 (93.84%), Query Frame = 0 

Query: 1   MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK 60
           MSS+HG PKHQNKY+WKPNAGRKINETEVGGRFRPLSE+TGVC RCKDQI+WKRRYGKYK
Sbjct: 1   MSSRHGPPKHQNKYSWKPNAGRKINETEVGGRFRPLSEVTGVCPRCKDQIEWKRRYGKYK 60

Query: 61  PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ 120
           PLSEPAKCQ CSKRAVRQAYHNLCPGCAK+QGVCAKCRC+V Q +GRDISEVEAEQKML+
Sbjct: 61  PLSEPAKCQSCSKRAVRQAYHNLCPGCAKEQGVCAKCRCQVGQIVGRDISEVEAEQKMLE 120

Query: 121 EAIKNARERDKRTLLRAMEKGKSKTS 147
           EAIKNARER++R+LLRAM K K K S
Sbjct: 121 EAIKNARERERRSLLRAMNKEKPKNS 146

[Close]
BLAST of Carg05889 vs. TrEMBL
Match: tr|A0A2P5B288|A0A2P5B288_PARAD (Small acidic-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_277980 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.9e-67
Identity = 124/146 (84.93%), Postives = 135/146 (92.47%), Query Frame = 0 

Query: 1   MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK 60
           MSS+HG PKHQNKYAWKPNAGRKINETEVGGRFRPLSE+TGVC RCKDQI+WKRRYGKYK
Sbjct: 1   MSSRHGPPKHQNKYAWKPNAGRKINETEVGGRFRPLSEVTGVCPRCKDQIEWKRRYGKYK 60

Query: 61  PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ 120
           PLSEPAKCQ C KRAVRQAYHNLCPGCAK+QGVC+KCRC+V Q +GRDISEVEAEQKML+
Sbjct: 61  PLSEPAKCQSCFKRAVRQAYHNLCPGCAKEQGVCSKCRCQVGQIVGRDISEVEAEQKMLE 120

Query: 121 EAIKNARERDKRTLLRAMEKGKSKTS 147
           EAIKNA ER++R+LLRAM K K K S
Sbjct: 121 EAIKNAPERERRSLLRAMNKEKPKNS 146

[Close]
BLAST of Carg05889 vs. TrEMBL
Match: tr|A0A2I4EBQ5|A0A2I4EBQ5_9ROSI (uncharacterized protein C9orf85 homolog OS=Juglans regia OX=51240 GN=LOC108988143 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 5.4e-67
Identity = 123/146 (84.25%), Postives = 134/146 (91.78%), Query Frame = 0 

Query: 1   MSSKHGAPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCLRCKDQIDWKRRYGKYK 60
           MS+KHGAPKHQNKYAWKP AG KINETEVGG+FRP SEITGVC RCK+QIDWKRRYGKYK
Sbjct: 1   MSNKHGAPKHQNKYAWKPKAGHKINETEVGGKFRPFSEITGVCPRCKEQIDWKRRYGKYK 60

Query: 61  PLSEPAKCQLCSKRAVRQAYHNLCPGCAKQQGVCAKCRCRVDQTIGRDISEVEAEQKMLQ 120
           PL+EPAKCQ CSKRAVRQAYHNLCPGCAK+QGVCAKCRCRV + +GRD SEVEAEQK L 
Sbjct: 61  PLAEPAKCQQCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVSRIVGRDSSEVEAEQKSLD 120

Query: 121 EAIKNARERDKRTLLRAMEKGKSKTS 147
           EAIKNARERD+RTLLRAM + +SK+S
Sbjct: 121 EAIKNARERDRRTLLRAMNRDQSKSS 146

The following BLAST results are available for this feature:
BLAST of Carg05889 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022990906.11.0e-8098.17ribosome biogenesis protein BOP1 homolog isoform X1 [Cucurbita maxima][more]
XP_023538167.13.0e-77100.00glutamic acid-rich protein [Cucurbita pepo subsp. pepo][more]
XP_022954477.18.8e-77100.00glutamic acid-rich protein isoform X1 [Cucurbita moschata][more]
XP_008459394.19.1e-7491.78PREDICTED: uncharacterized protein LOC103498541 [Cucumis melo][more]
XP_004141470.16.5e-7292.91PREDICTED: uncharacterized protein LOC101206376 [Cucumis sativus] >KGN52523.1 hy... [more]
BLAST of Carg05889 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G02220.11.7e-5867.88unknown protein[more]
BLAST of Carg05889 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q96MD7|CI085_HUMAN9.4e-1436.73Uncharacterized protein C9orf85 OS=Homo sapiens OX=9606 GN=C9orf85 PE=1 SV=1[more]
sp|Q9CQ90|CI085_MOUSE1.6e-1337.78Uncharacterized protein C9orf85 homolog OS=Mus musculus OX=10090 PE=2 SV=1[more]
sp|Q68FU5|CI085_RAT2.1e-1337.78Uncharacterized protein C9orf85 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1[more]
BLAST of Carg05889 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CAL0|A0A1S3CAL0_CUCME6.0e-7491.78uncharacterized protein LOC103498541 OS=Cucumis melo OX=3656 GN=LOC103498541 PE=... [more]
tr|A0A0A0KSJ8|A0A0A0KSJ8_CUCSA4.3e-7292.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G640570 PE=4 SV=1[more]
tr|A0A2P5E954|A0A2P5E954_9ROSA5.8e-6986.30Small acidic-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_220700 PE=4... [more]
tr|A0A2P5B288|A0A2P5B288_PARAD1.9e-6784.93Small acidic-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_277980 ... [more]
tr|A0A2I4EBQ5|A0A2I4EBQ5_9ROSI5.4e-6784.25uncharacterized protein C9orf85 homolog OS=Juglans regia OX=51240 GN=LOC10898814... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019351DUF2039
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg05889-RACarg05889-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 109..129
NoneNo IPR availableCOILSCoilCoilcoord: 191..210
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..210
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..210
IPR019351Protein of unknown function DUF2039PFAMPF10217DUF2039coord: 8..98
e-value: 4.3E-28
score: 97.4
IPR019351Protein of unknown function DUF2039PANTHERPTHR22876FAMILY NOT NAMEDcoord: 2..200