Cp4.1LG01g22550 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g22550
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionSPIRAL1-like1
LocationCp4.1LG01 : 20175906 .. 20178909 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAGAACAATAATAATAAGATTTGAAAATTTGAAAATAATATTTAATAGCATCTCAGGTTCTCTGGTTGTGGCCTGTGTTGCGAAGGTGCTCTGCTGTCTTCCATCGTCTGCCTCCTTATCTCTTCCTTTTGATCCCATTTTCATTCACAGAACATTTTCGAGGTACCCGCTTTAAATCTTTACCTTCTCATTTCAGATCCACGTTTCTTTAAGGTTTTGTTCGCCGATCTGATCATTTGTTGCTATTTTCCCGCACTCCATTTCCGTCTTTGTACGTACTCTCGTGATATACTTGATTCACTGTCTACATTGTTTTCGTTTACCAATTTGATTTATGTTCTTTGATCTTTGATGAGGTTGAATTGAAATGTGATCCTTGTTTTGGTTTTGAATCGATTGAAATGTTGAAATGTTTGTTGCTGGATGCTGTGTGAGCTCAAAATTATAGCACGCTTGTTTGTAGTGGATCTGTAAGAAGAAGACTGGGAATATTTGAAGCATGATATGAATCATGCATAGAAATGAAGAATTCATACCATGTGGTTCGCAGTTTGCTAAGTGTTATAGTAAATGATGTAGGTATTAGTTTATTGTCAGCTGATTAATAAAGTTGCCAATTCACCTCAAACAGAACTGCGAAAGTAAAAATATCCATATTCTTTCGTAAACATTTCAAAAGTACTGAAATCTTTTAAAATATTGGACAAAAATCGATGTAACAATGACTAAGACGCTTGCCTAAATTAAGTTTGCATTAAGAAACATTGACTTTTCGTCCAATATTCTAATAGTTGTTCTATTTCAATCGTAGTTTTTTAAACATGGTCAAAGTAACATTGCAACTTTGGAAAGAATAGACATTTTTTAAACAAAAGACGGTACTTTTTATAATTTAGCCATTTTTGAATTGAGAACTTGCTGCTTATGAAGATGTGCAATAGATTTTTTTCATCTAGTTTTGTTCATCAGTGGTTGTAGCTTTGTACCTTCTTCTTTTATTCATTGAAATACTATTAATAATGTAGAGCCGGCTTGGTAGACGTCAACAAGGGCCAAATGGTCATCGTAGCTCTTTACCCTGATATTTTATTAACTAAATTTCAGAATTGGGTTGATAGTCTTCAACAAGAGCCTTTGGATCACGATTTTGTGCTTAAACAAGCAAAAGCATTTTATATATACTGTTGCTGTATATGCCAAATGTATGATATTGGCAATTTATGCCTATAACTTTATTTCCCTCTGACTTCTCTGGATGTTATTTCCTTTATGGTATGCCCCCTTTTTCTCTTTATATAGTCTAATAGTTAAATGTGTTATCACTATAATTACATCTGGGTCTTATGTTGTTGTGTTAACAGGAGAAACAAAAGGCTTGAAAATGGGTCGTGGAGTTAGCAGCGGCGGTGGACAGAGTTCCTTGGGCTACCTGTTTGGAGGTGGGGAGCCGGCCAACAATGTGCAAGCTTCTAAGAAACCCAATGGATCTTCTCAGCCTACCTCTTCTACTTCACAACCTGCTGATAAACACATACCTGCTGGCATTCCGGGGAATCATACTAACAATTACCATAGAGCAGATGGACAGAACTGTGGCAACTTTATCACGGTAGGCTCTTTGTTTTCTTGTTGGATTGAAATGTTTTGTGCTGATAGTTATTCACCAACTATCCTGACCTTCCACTGTCATAGTTATAACACCATAACTGTAACAGTCAAAGCCAAAAGCCCACCGTTAGTAGATATTGTCCTCTTTGGACTTTCCCTTTCAGCCCCTCAAGATTTTTAAAACGTGTCCGAGAGGTTTGCACACCCTTATAAATAATAGTTTGTTCCCCTCTTCCATACTTGGACAAGTCTTTTTCCCTTTGACCTTACTAATTGGTTAACTGTGTTTAAAAAATGTTTAAGTTGGTACAATCTTTGATAATCATGGCGAGTGATGGGCCGAAAGTGAAGGCAGAGAGGAAATAGCTTAGGCCATTGTTCTAGAGGAAAAGGCTAATACAGTTGGCAGATAGGAAATTCCTGAAACATTAGGAAGATTGATGTCTCAATAAACCAAAGGGTGAAGAAAGCAGTGCACCAGTTACATCTACAGGAGCTTCTCACCCATCATTTTCTTAGAACTTCTTTCTTGGGGACATAACCAAAGAAAAGATTGTAATAACAATAGATGTGCTCAAGAAAATTTGTTAATTATTAACGTAACGCACAAGTCCACCATTAGCCGATATTATCCTCTTTGGGCTTTCCTTTTCGGACTTCCTCTCAAGATTTTTAAATTCCTCTGGGAGAGGGAGGTTTCTACACCCTTAAATGTTTCGTTCTACTCCTCAACCGATGTGGGATCTCACAATTAAGTACTGATGAGATCCTCAATGCTATTCAACTGTTTCAATTTTTGATCCGAGAAAGATTCAATTTTTAATCTGAAAGTTCTGAAGAATGCTTCGTCAAAGTGTTCTGTATCTGAATCAATGGTTGATTATGGCTTTATTTCAAATCTGAATCCTCATTTATATATATAACCATTGGAATGTAAACGTTGGTGCATGTATTGACAGGATCGTCCATCGACCAAGGTTCACGCCGCACCTGGTGGCGGATCTTCTCTGGACTTCCTGTTCGGAAACGGCAAGAGCTAAGTTGGTTAAGAACCAAGAAAGACCCACTATTGGTGGCTATCATATGTAAACTAGAACATTATATATTTCTACTTATGCACGAGGTTGTCTCCTCATGGTCAGAACCGTAGGCATGCGCTGGTGCTGATGGGCACTTCATGATGCTTTGTTTGAAACAAAAGTGATTATTGTATCTTGTTCTCCTCTGAATCTCTGGCATTCGCCTGTTTATGAACTCTTATGTTTGGCTCTCGCCATTAATTTCAATTCTGAATCTCACAGTCCACCCTTTCTGAATAACATCGCACCATTTAAAGAAAGATTATGTCTTAAACTTTAGACTTAATCAACATGATGATGGTTGTACTTTTGTACT

mRNA sequence

TAAGAACAATAATAATAAGATTTGAAAATTTGAAAATAATATTTAATAGCATCTCAGGTTCTCTGGTTGTGGCCTGTGTTGCGAAGGTGCTCTGCTGTCTTCCATCGTCTGCCTCCTTATCTCTTCCTTTTGATCCCATTTTCATTCACAGAACATTTTCGAGGAGAAACAAAAGGCTTGAAAATGGGTCGTGGAGTTAGCAGCGGCGGTGGACAGAGTTCCTTGGGCTACCTGTTTGGAGGTGGGGAGCCGGCCAACAATGTGCAAGCTTCTAAGAAACCCAATGGATCTTCTCAGCCTACCTCTTCTACTTCACAACCTGCTGATAAACACATACCTGCTGGCATTCCGGGGAATCATACTAACAATTACCATAGAGCAGATGGACAGAACTGTGGCAACTTTATCACGGATCGTCCATCGACCAAGGTTCACGCCGCACCTGGTGGCGGATCTTCTCTGGACTTCCTGTTCGGAAACGGCAAGAGCTAAGTTGGTTAAGAACCAAGAAAGACCCACTATTGGTGGCTATCATATGTAAACTAGAACATTATATATTTCTACTTATGCACGAGGTTGTCTCCTCATGGTCAGAACCGTAGGCATGCGCTGGTGCTGATGGGCACTTCATGATGCTTTGTTTGAAACAAAAGTGATTATTGTATCTTGTTCTCCTCTGAATCTCTGGCATTCGCCTGTTTATGAACTCTTATGTTTGGCTCTCGCCATTAATTTCAATTCTGAATCTCACAGTCCACCCTTTCTGAATAACATCGCACCATTTAAAGAAAGATTATGTCTTAAACTTTAGACTTAATCAACATGATGATGGTTGTACTTTTGTACT

Coding sequence (CDS)

ATGGGTCGTGGAGTTAGCAGCGGCGGTGGACAGAGTTCCTTGGGCTACCTGTTTGGAGGTGGGGAGCCGGCCAACAATGTGCAAGCTTCTAAGAAACCCAATGGATCTTCTCAGCCTACCTCTTCTACTTCACAACCTGCTGATAAACACATACCTGCTGGCATTCCGGGGAATCATACTAACAATTACCATAGAGCAGATGGACAGAACTGTGGCAACTTTATCACGGATCGTCCATCGACCAAGGTTCACGCCGCACCTGGTGGCGGATCTTCTCTGGACTTCCTGTTCGGAAACGGCAAGAGCTAA

Protein sequence

MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS
Homology
[Close]
BLAST of Cp4.1LG01g22550 vs. Swiss-Prot
Match: SP1L3_ORYSJ (Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica GN=Os12g0502000 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 7.9e-27
Identity = 66/101 (65.35%), Postives = 76/101 (75.25%), Query Frame = 1 

Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 60
           MGRGVSSGGGQSSLGYLFGGGE     ++++KP    +P  S+S    K IPAGI  +  
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGEAP---KSAEKPAPVQKPAPSSSAEKLKEIPAGIQSSKA 60

Query: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGK 102
           NNY RA+GQNCGNF+TDRPSTKV AAPGGGSSLD+LF   K
Sbjct: 61  NNYMRAEGQNCGNFLTDRPSTKVQAAPGGGSSLDYLFSGNK 98

[Close]
BLAST of Cp4.1LG01g22550 vs. Swiss-Prot
Match: SP1L1_ARATH (Protein SPIRAL1-like 1 OS=Arabidopsis thaliana GN=SP1L1 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.9e-25
Identity = 68/112 (60.71%), Postives = 76/112 (67.86%), Query Frame = 1 

Query: 1   MGRGVSSGGGQSSLGYLFGGGE-PANNVQASKKPNGSSQPTSSTSQP---------ADKH 60
           MGRGVS GGGQSSLGYLFG GE P   +  +  P+  + P S+   P           K 
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAPKPAINNAPAPSSETLPISADPSPKHVAAQTVNVTKQ 60

Query: 61  IPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 103
           IPAGI  + TNNY RADGQN GNF+TDRPSTKVHAAPGGGSSLD+LFG G S
Sbjct: 61  IPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGGGS 112

[Close]
BLAST of Cp4.1LG01g22550 vs. Swiss-Prot
Match: SP1L2_ARATH (Protein SPIRAL1-like 2 OS=Arabidopsis thaliana GN=SP1L2 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 9.6e-25
Identity = 64/110 (58.18%), Postives = 76/110 (69.09%), Query Frame = 1 

Query: 1   MGRGVSSGGGQSSLGYLFGGGEP-----ANNVQASKKPNGSSQPTSSTSQPAD---KHIP 60
           MGRGVS+GGGQSSLGYLFG GE       N   A  + +  + PT + +  A    K +P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 61  AGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 103
           AG+  N  NNY RA+GQN GNFITDRPSTKVH+APGGGSSLD+LFG G +
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGGSN 110

[Close]
BLAST of Cp4.1LG01g22550 vs. Swiss-Prot
Match: SP1L2_ORYSJ (Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica GN=Os11g0629400 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.4e-23
Identity = 64/110 (58.18%), Postives = 70/110 (63.64%), Query Frame = 1 

Query: 2   GRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPAD------------- 61
           GRGVSSGGGQSSLGYLFGGGE A   +A        + T +  + A              
Sbjct: 4   GRGVSSGGGQSSLGYLFGGGETAPAAKAKPAAAAEKETTPAPVKKAAVAAAASPSAAEKM 63

Query: 62  KHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG 99
           K IPAGI     NNY RA GQNCGNF+TDRPSTKVHAAPGGGSSL +LFG
Sbjct: 64  KEIPAGIQSTQANNYFRAQGQNCGNFLTDRPSTKVHAAPGGGSSLGYLFG 113

[Close]
BLAST of Cp4.1LG01g22550 vs. Swiss-Prot
Match: SP1L1_ORYSJ (Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica GN=Os03g0417800 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.0e-22
Identity = 64/114 (56.14%), Postives = 75/114 (65.79%), Query Frame = 1 

Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQ-----ASKKPNGSSQPTSSTSQPADK------ 60
           M RG S+GGGQSSLGYLFGG E           A+  P  +  P ++ + PA+K      
Sbjct: 1   MSRGGSAGGGQSSLGYLFGGNEAPKPAAKPAPAAAPAPAPAPAPAAAVAAPAEKPSPAKA 60

Query: 61  ----HIPAGIPGNHTNN-YHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG 99
                IPAGI G+ +NN YHRADGQN GNF+TDRPSTKVHAAPGGGSSL +LFG
Sbjct: 61  DATKQIPAGIQGSRSNNNYHRADGQNTGNFLTDRPSTKVHAAPGGGSSLGYLFG 114

[Close]
BLAST of Cp4.1LG01g22550 vs. TrEMBL
Match: A0A067JWW4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19962 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.2e-31
Identity = 77/98 (78.57%), Postives = 82/98 (83.67%), Query Frame = 1 

Query: 1  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 60
          MGRGVS+GGGQSSLGYLFG GE ANN +A+K P  SSQ     SQP DK IPAGI GN T
Sbjct: 1  MGRGVSAGGGQSSLGYLFGNGESANNDKAAKSP--SSQKPIVGSQPIDKQIPAGIHGNLT 60

Query: 61 NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG 99
          NNY+RADGQNCGNFITDRPSTKVHAAPGGGSSL +LFG
Sbjct: 61 NNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLGYLFG 96

[Close]
BLAST of Cp4.1LG01g22550 vs. TrEMBL
Match: B9IK91_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s13090g PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 4.1e-30
Identity = 75/105 (71.43%), Postives = 80/105 (76.19%), Query Frame = 1 

Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGS-----SQPTSSTSQPADKHIPAGI 60
           MGRGVS+GGGQSSLGYLFG GEPANN   +K    S     S   +S S P DK  PAGI
Sbjct: 1   MGRGVSAGGGQSSLGYLFGNGEPANNSPVAKNVGNSASISPSPKPASASPPIDKQTPAGI 60

Query: 61  PGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG 101
            GN TNNY+RADGQNCGNFITDRPSTKVHAAPGGGSSL +LFG G
Sbjct: 61  HGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLGYLFGGG 105

[Close]
BLAST of Cp4.1LG01g22550 vs. TrEMBL
Match: A0A061EFP9_THECC (Methyl esterase 11 OS=Theobroma cacao GN=TCM_018817 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.0e-28
Identity = 73/105 (69.52%), Postives = 79/105 (75.24%), Query Frame = 1 

Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKK-----PNGSSQPTSSTSQPADKHIPAGI 60
           MGRGVS+GGGQSSLGYLFG GE  +N Q +        N   Q  +S+S P DK IPAGI
Sbjct: 365 MGRGVSAGGGQSSLGYLFGAGESGSNAQGTPNRGQAAENEPYQKPASSSPPIDKQIPAGI 424

Query: 61  PGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG 101
            GN TNNY RADGQNCGNFITDRPSTKVHAAPGGGSSL +LFG G
Sbjct: 425 HGNLTNNYFRADGQNCGNFITDRPSTKVHAAPGGGSSLGYLFGGG 469

[Close]
BLAST of Cp4.1LG01g22550 vs. TrEMBL
Match: A0A068U1C0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00039691001 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.9e-28
Identity = 74/108 (68.52%), Postives = 83/108 (76.85%), Query Frame = 1 

Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSST-----SQPAD--KHIPA 60
           MGRGVS+GGGQSSLGYLFGGGE AN   A+K    +S   SST     SQP D  K +PA
Sbjct: 1   MGRGVSAGGGQSSLGYLFGGGEAANTPPAAKTEVKASNGESSTKPAAVSQPVDAIKQVPA 60

Query: 61  GIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGK 102
           GI  N+ NNY RADGQNCGNF+T+RPSTKVHAAPGGGSSL +LFG+GK
Sbjct: 61  GIQSNNANNYMRADGQNCGNFLTERPSTKVHAAPGGGSSLGYLFGDGK 108

[Close]
BLAST of Cp4.1LG01g22550 vs. TrEMBL
Match: B9T5M1_RICCO (SP1L, putative OS=Ricinus communis GN=RCOM_0048980 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 3.8e-28
Identity = 72/103 (69.90%), Postives = 80/103 (77.67%), Query Frame = 1 

Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSS-----TSQPADKHIPAGI 60
           MGRGVS+GGGQSSLGYLFG GE ANN  A+K    ++  + S      S P +K IPAGI
Sbjct: 1   MGRGVSAGGGQSSLGYLFGNGETANNSPAAKSVGQAANNSPSPKPVVASPPINKEIPAGI 60

Query: 61  PGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG 99
            GN TNNY+RADGQNCGNFITDRPSTKVHAAPGGGSSL +LFG
Sbjct: 61  HGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLGYLFG 103

[Close]
BLAST of Cp4.1LG01g22550 vs. TAIR10
Match: AT1G26355.1 (AT1G26355.1 SPIRAL1-like1)

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-26
Identity = 68/112 (60.71%), Postives = 76/112 (67.86%), Query Frame = 1 

Query: 1   MGRGVSSGGGQSSLGYLFGGGE-PANNVQASKKPNGSSQPTSSTSQP---------ADKH 60
           MGRGVS GGGQSSLGYLFG GE P   +  +  P+  + P S+   P           K 
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGEAPKPAINNAPAPSSETLPISADPSPKHVAAQTVNVTKQ 60

Query: 61  IPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 103
           IPAGI  + TNNY RADGQN GNF+TDRPSTKVHAAPGGGSSLD+LFG G S
Sbjct: 61  IPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGGGS 112

[Close]
BLAST of Cp4.1LG01g22550 vs. TAIR10
Match: AT1G69230.1 (AT1G69230.1 SPIRAL1-like2)

HSP 1 Score: 114.0 bits (284), Expect = 5.4e-26
Identity = 64/110 (58.18%), Postives = 76/110 (69.09%), Query Frame = 1 

Query: 1   MGRGVSSGGGQSSLGYLFGGGEP-----ANNVQASKKPNGSSQPTSSTSQPAD---KHIP 60
           MGRGVS+GGGQSSLGYLFG GE       N   A  + +  + PT + +  A    K +P
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVP 60

Query: 61  AGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGKS 103
           AG+  N  NNY RA+GQN GNFITDRPSTKVH+APGGGSSLD+LFG G +
Sbjct: 61  AGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGGSN 110

[Close]
BLAST of Cp4.1LG01g22550 vs. TAIR10
Match: AT2G03680.1 (AT2G03680.1 spiral1)

HSP 1 Score: 102.4 bits (254), Expect = 1.6e-22
Identity = 68/120 (56.67%), Postives = 78/120 (65.00%), Query Frame = 1 

Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKP------NGSSQP----------TSSTS 60
           MGRG S GGGQSSL YLFGG  PA     + +P      NG + P          T++TS
Sbjct: 1   MGRGNSCGGGQSSLDYLFGGDAPAPKPVPAPRPAPTESNNGPAPPVTAVTATALTTATTS 60

Query: 61  -QPAD--KHIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGK 102
            +PA+  K IPAGI     NNY RA+GQN GNF+TDRPSTKVHAAPGGGSSLD+LF  GK
Sbjct: 61  VEPAELNKQIPAGIK-TPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFTGGK 119

[Close]
BLAST of Cp4.1LG01g22550 vs. TAIR10
Match: AT5G15600.1 (AT5G15600.1 SPIRAL1-like4)

HSP 1 Score: 100.1 bits (248), Expect = 8.1e-22
Identity = 62/121 (51.24%), Postives = 78/121 (64.46%), Query Frame = 1 

Query: 3   RGVSSGGGQSSLGYLFGGGEPANNVQASKKPN-------------------GSSQPTSST 62
           RGV+SGGG+SSLGYLFG GE   +V    KPN                   G  + T++T
Sbjct: 5   RGVNSGGGESSLGYLFGSGE---SVPKPNKPNAKTGFTTTTTTTTTTDGAGGRPKTTTTT 64

Query: 63  SQPADKHIP----AGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGN 101
           +   DK+      AG+ G+  NNY+R+DGQNCGNF+T+RPSTKVHAAPGGGSSL +LFG+
Sbjct: 65  TTTGDKNKTEENSAGVRGS-PNNYYRSDGQNCGNFLTERPSTKVHAAPGGGSSLGYLFGS 121

[Close]
BLAST of Cp4.1LG01g22550 vs. TAIR10
Match: AT3G02180.1 (AT3G02180.1 SPIRAL1-like3)

HSP 1 Score: 94.7 bits (234), Expect = 3.4e-20
Identity = 55/109 (50.46%), Postives = 72/109 (66.06%), Query Frame = 1 

Query: 3   RGVSSGGGQSSLGYLFGGGEPANNVQASKKPN-------------GSSQPTSSTSQPADK 62
           RGV++G  +SSLGYLFG G+P++   A+                 G    T++T+   +K
Sbjct: 5   RGVNNGVNESSLGYLFGSGQPSSAAAATMGTTTTTTTTTTTDGTGGRPITTTTTTVTDNK 64

Query: 63  HIPAGIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG 99
              AG+ G+  NNY R++GQNCGNF+TDRPSTKVHAAPGGGSSLD+LFG
Sbjct: 65  KTSAGVRGS-PNNYFRSEGQNCGNFLTDRPSTKVHAAPGGGSSLDYLFG 112

[Close]
BLAST of Cp4.1LG01g22550 vs. NCBI nr
Match: gi|643714908|gb|KDP27263.1| (hypothetical protein JCGZ_19962 [Jatropha curcas])

HSP 1 Score: 142.9 bits (359), Expect = 3.1e-31
Identity = 77/98 (78.57%), Postives = 82/98 (83.67%), Query Frame = 1 

Query: 1  MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 60
          MGRGVS+GGGQSSLGYLFG GE ANN +A+K P  SSQ     SQP DK IPAGI GN T
Sbjct: 1  MGRGVSAGGGQSSLGYLFGNGESANNDKAAKSP--SSQKPIVGSQPIDKQIPAGIHGNLT 60

Query: 61 NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG 99
          NNY+RADGQNCGNFITDRPSTKVHAAPGGGSSL +LFG
Sbjct: 61 NNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLGYLFG 96

[Close]
BLAST of Cp4.1LG01g22550 vs. NCBI nr
Match: gi|802715966|ref|XP_012084838.1| (PREDICTED: putative methylesterase 11, chloroplastic [Jatropha curcas])

HSP 1 Score: 142.9 bits (359), Expect = 3.1e-31
Identity = 77/98 (78.57%), Postives = 82/98 (83.67%), Query Frame = 1 

Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSSTSQPADKHIPAGIPGNHT 60
           MGRGVS+GGGQSSLGYLFG GE ANN +A+K P  SSQ     SQP DK IPAGI GN T
Sbjct: 361 MGRGVSAGGGQSSLGYLFGNGESANNDKAAKSP--SSQKPIVGSQPIDKQIPAGIHGNLT 420

Query: 61  NNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG 99
           NNY+RADGQNCGNFITDRPSTKVHAAPGGGSSL +LFG
Sbjct: 421 NNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLGYLFG 456

[Close]
BLAST of Cp4.1LG01g22550 vs. NCBI nr
Match: gi|224141087|ref|XP_002323906.1| (hypothetical protein POPTR_0017s13090g [Populus trichocarpa])

HSP 1 Score: 138.7 bits (348), Expect = 5.8e-30
Identity = 75/105 (71.43%), Postives = 80/105 (76.19%), Query Frame = 1 

Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGS-----SQPTSSTSQPADKHIPAGI 60
           MGRGVS+GGGQSSLGYLFG GEPANN   +K    S     S   +S S P DK  PAGI
Sbjct: 1   MGRGVSAGGGQSSLGYLFGNGEPANNSPVAKNVGNSASISPSPKPASASPPIDKQTPAGI 60

Query: 61  PGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG 101
            GN TNNY+RADGQNCGNFITDRPSTKVHAAPGGGSSL +LFG G
Sbjct: 61  HGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLGYLFGGG 105

[Close]
BLAST of Cp4.1LG01g22550 vs. NCBI nr
Match: gi|590651007|ref|XP_007032785.1| (Methyl esterase 11 [Theobroma cacao])

HSP 1 Score: 134.0 bits (336), Expect = 1.4e-28
Identity = 73/105 (69.52%), Postives = 79/105 (75.24%), Query Frame = 1 

Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKK-----PNGSSQPTSSTSQPADKHIPAGI 60
           MGRGVS+GGGQSSLGYLFG GE  +N Q +        N   Q  +S+S P DK IPAGI
Sbjct: 365 MGRGVSAGGGQSSLGYLFGAGESGSNAQGTPNRGQAAENEPYQKPASSSPPIDKQIPAGI 424

Query: 61  PGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNG 101
            GN TNNY RADGQNCGNFITDRPSTKVHAAPGGGSSL +LFG G
Sbjct: 425 HGNLTNNYFRADGQNCGNFITDRPSTKVHAAPGGGSSLGYLFGGG 469

[Close]
BLAST of Cp4.1LG01g22550 vs. NCBI nr
Match: gi|661893889|emb|CDP02330.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 132.5 bits (332), Expect = 4.2e-28
Identity = 74/108 (68.52%), Postives = 83/108 (76.85%), Query Frame = 1 

Query: 1   MGRGVSSGGGQSSLGYLFGGGEPANNVQASKKPNGSSQPTSST-----SQPAD--KHIPA 60
           MGRGVS+GGGQSSLGYLFGGGE AN   A+K    +S   SST     SQP D  K +PA
Sbjct: 1   MGRGVSAGGGQSSLGYLFGGGEAANTPPAAKTEVKASNGESSTKPAAVSQPVDAIKQVPA 60

Query: 61  GIPGNHTNNYHRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGK 102
           GI  N+ NNY RADGQNCGNF+T+RPSTKVHAAPGGGSSL +LFG+GK
Sbjct: 61  GIQSNNANNYMRADGQNCGNFLTERPSTKVHAAPGGGSSLGYLFGDGK 108

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g22550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SP1L3_ORYSJ7.9e-2765.35Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica GN=Os12g0502000 PE=3 SV=1[more]
SP1L1_ARATH1.9e-2560.71Protein SPIRAL1-like 1 OS=Arabidopsis thaliana GN=SP1L1 PE=2 SV=1[more]
SP1L2_ARATH9.6e-2558.18Protein SPIRAL1-like 2 OS=Arabidopsis thaliana GN=SP1L2 PE=2 SV=1[more]
SP1L2_ORYSJ1.4e-2358.18Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica GN=Os11g0629400 PE=3 SV=1[more]
SP1L1_ORYSJ2.0e-2256.14Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica GN=Os03g0417800 PE=3 SV=1[more]
BLAST of Cp4.1LG01g22550 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A067JWW4_JATCU2.2e-3178.57Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19962 PE=4 SV=1[more]
B9IK91_POPTR4.1e-3071.43Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s13090g PE=4 SV=1[more]
A0A061EFP9_THECC1.0e-2869.52Methyl esterase 11 OS=Theobroma cacao GN=TCM_018817 PE=4 SV=1[more]
A0A068U1C0_COFCA2.9e-2868.52Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00039691001 PE=4 SV=1[more]
B9T5M1_RICCO3.8e-2869.90SP1L, putative OS=Ricinus communis GN=RCOM_0048980 PE=4 SV=1[more]
BLAST of Cp4.1LG01g22550 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G26355.11.1e-2660.71 SPIRAL1-like1[more]
AT1G69230.15.4e-2658.18 SPIRAL1-like2[more]
AT2G03680.11.6e-2256.67 spiral1[more]
AT5G15600.18.1e-2251.24 SPIRAL1-like4[more]
AT3G02180.13.4e-2050.46 SPIRAL1-like3[more]
BLAST of Cp4.1LG01g22550 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|643714908|gb|KDP27263.1|3.1e-3178.57hypothetical protein JCGZ_19962 [Jatropha curcas][more]
gi|802715966|ref|XP_012084838.1|3.1e-3178.57PREDICTED: putative methylesterase 11, chloroplastic [Jatropha curcas][more]
gi|224141087|ref|XP_002323906.1|5.8e-3071.43hypothetical protein POPTR_0017s13090g [Populus trichocarpa][more]
gi|590651007|ref|XP_007032785.1|1.4e-2869.52Methyl esterase 11 [Theobroma cacao][more]
gi|661893889|emb|CDP02330.1|4.2e-2868.52unnamed protein product [Coffea canephora][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005524 ATP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g22550.1Cp4.1LG01g22550.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33403FAMILY NOT NAMEDcoord: 1..98
score: 2.2
NoneNo IPR availablePANTHERPTHR33403:SF4SUBFAMILY NOT NAMEDcoord: 1..98
score: 2.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g22550CmaCh04G028050Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g22550Cla016514Watermelon (97103) v1cpewmB462
Cp4.1LG01g22550ClCG11G004840Watermelon (Charleston Gray)cpewcgB355
Cp4.1LG01g22550Lsi03G001770Bottle gourd (USVL1VR-Ls)cpelsiB339
Cp4.1LG01g22550Bhi06G000273Wax gourdcpewgoB0502
Cp4.1LG01g22550Carg05887Silver-seed gourdcarcpeB0034
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g22550Silver-seed gourdcarcpeB0373
Cp4.1LG01g22550Silver-seed gourdcarcpeB0374
Cp4.1LG01g22550Cucumber (Chinese Long) v3cpecucB0472
Cp4.1LG01g22550Cucumber (Chinese Long) v3cpecucB0517
Cp4.1LG01g22550Cucurbita pepo (Zucchini)cpecpeB199
Cp4.1LG01g22550Cucumber (Gy14) v1cgycpeB0255
Cp4.1LG01g22550Cucumber (Gy14) v1cgycpeB0425
Cp4.1LG01g22550Cucurbita maxima (Rimu)cmacpeB317
Cp4.1LG01g22550Cucurbita moschata (Rifu)cmocpeB279
Cp4.1LG01g22550Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g22550Wild cucumber (PI 183967)cpecpiB380
Cp4.1LG01g22550Wild cucumber (PI 183967)cpecpiB414
Cp4.1LG01g22550Cucumber (Chinese Long) v2cpecuB415
Cp4.1LG01g22550Bottle gourd (USVL1VR-Ls)cpelsiB330
Cp4.1LG01g22550Melon (DHL92) v3.5.1cpemeB358
Cp4.1LG01g22550Cucumber (Gy14) v2cgybcpeB625
Cp4.1LG01g22550Melon (DHL92) v3.6.1cpemedB408
Cp4.1LG01g22550Melon (DHL92) v3.6.1cpemedB418